Digital Commons Network^™

Genetic Variation In Ustilago Bullata: Molecular Genetic Markers And Virulence On Bromus Tectorum Host Lines, Mikel Stevens, Daniel J. Fairbanks, Susan E. Meyer, David L. Nelson, Suzette Clement, Jennifer Waters

Faculty Publications

The pathogen Ustilago bullata often causes epidemic levels of head smut disease in Intermountain populations of the inbreeding annual grass Bromus tectorum. We examined patterns of genetic variation for virulence and for amplified fragment length polymorphism (AFLP) markers in four U. bullata populations on B. tectorum in northern Utah and southern Nevada. Patterns of disease incidence generally supported a genefor-gene model for virulence and resistance in this pathosystem. Most host lines were susceptible to most or all paired isolates included in cross-inoculation tests, but we found evidence for the existence of four avirulence genes. Host lines with alleles conferring resistance …

Seasonal Acceptance Of Fourwing Saltbush By Sheep When Crested Wheatgrass Is The Alternative, Val J. Anderson, R. D. Horrocks, Christine W. Royer, Stephen B. Monsen

Faculty Publications

Many sagebrush-grass ranges have been seeded to crested wheatgrass [Agropyron desertorum (Fischer ex Link) Shultes]. These ranges are generally nutritionally inadequate for sheep (Ovis aries L.), except for short grazing periods in the spring and fall. To increase production and diversity, particularly crude protein for late-season grazing, fourwing saltbush [Atriplex canescens (Pursch.) Nutt.] was planted in an existing stand of crested wheatgrass. Quantification of sheep forage preferences on these improved ranges aids in determining the length of the grazing season and the extent to which shrubs provide the supplemental nutrition required. This seasonal grazing study was conducted on a characteristic …

Leadership, Collective Personality, And Performance, David A. Hofmann, Lisa Jones Christensen

Faculty Publications

By viewing behavior regularities at the individual and collective level as functionally isomorphic, a referent-shift compositional model for the Big 5 personality dimensions is developed. On the basis of this compositional model, a common measure of Big 5 personality at the individual level is applied to the collective as a whole. Within this framework, it is also hypothesized that leadership (i.e., transformational, transactional, and passive) would predict collective personality and that collective personality would be significantly related to collective performance. The results supported these hypotheses using a sample of franchised units. On the basis of recent research at the individual …

Recognition Of Affective Prosody By Speakers Of English As A First Or Foreign Language, Christopher Dromey, Jose Silveira, Paul Sandor

Faculty Publications

Adults who were fluent in English, and who grew up speaking English or one of 21 other languages listened to words spoken with angry or neutral intonation. We measured the accuracy with which the listeners identified the intended emotion. English mother tongue (EMT) polyglots scored higher than other mother tongue (OMT) listeners, whereas EMT monoglots did not. Women were significantly more accurate than men across the three listener groups. There was a modest inverse correlation between accuracy and age. The learning of a second language may have helped the EMT polyglots develop additional perceptual skills in decoding speech emotion in …

Shared Experience Building Around The Family Crucible Of Cancer, W. David Robinson, Jason S. Carroll, Wendy L. Watson

Faculty Publications

This study was designed to gain a greater understanding of the effects cancer has on families while simultaneously developing family therapy interventions that are helpful for families experiencing the crucible of cancer. On the basis of an action research paradigm, the authors designed an intensive case-analysis protocol involving reflective interviewing to learn about the personal perspectives of family members who participate in therapeutic treatment for cancer. An integration of reflective insight by the families, their therapist, and the research team ultimately revealed that cancer families face an ongoing struggle (a) between feelings of isolation and connectedness, (b) to make meaning …

Thorium-Based Thin Films As Highly Reflective Mirrors In The Euv, David D. Allred, William R. Evans, Jed E. Johnson, Richard L. Sandberg, R. Steven Turley

Faculty Publications

As applications for extreme ultraviolet (EUV) radiation have been identified, the demand for better optics has also increased. Thorium and thorium oxide thin films (19 to 61 nm thick) were RF-sputtered and characterized using atomic force microscopy (AFM), spectroscopic ellipsometry, low-angle x-ray diffraction (LAXRD), x-ray photoelectron spectroscopy (XPS), and x-ray absorption near edge structure (XANES) in order to assess their capability as EUV reflectors. Their reflectance and absorption at different energies were also measured and analyzed at the Advanced Light Source in Berkeley. The reflectance of oxidized thorium is reported between 2 and 32 nm at 5, 10, and 15 …

The Effect Of Prostaglandin Inhibitor On Pregnancy Rates Of Heifer Embryo Transfer Recipients, Jared William Mcnaughtan

Theses and Dissertations

Manipulation of the reproductive tract results in increased levels of prostaglandin, which may, in turn, reduce pregnancy rates in embryo recipients. Administration of a prostaglandin inhibitor prior to embryo transfer improves pregnancy rates in cows. Embryo transfer into heifers is more difficult and often requires additional manipulation of the uterus. This study was designed to determine whether administration of the prostaglandin inhibitor, flunixin meglumine, immediately prior to embryo transfer increases pregnancy rates in heifers. Heifers (n=466) were divided into two equal groups based on BCS (range=6-7) and weight (range=256-455). Estrus was synchronized in heifers by giving two injections of prostaglandin …

Dietary Isoflavones Alter Regulatory Behaviors, Metabolic Hormones And Neuroendocrine Function In Long-Evans Male Rats, Edwin D. Lephart, James P. Proter, Lihong H. Bu, Trent D. Lund, Kenneth Setchell, Gina Ramoz, William R. Crowley

Faculty Publications

Phytoestrogens derived from soy foods (or isoflavones) have received prevalent usage due to their 'health benefits' of decreasing: a) age-related diseases, b) hormone-dependent cancers and c) postmenopausal symptoms. However, little is known about the influence of dietary phytoestrogens on regulatory behaviors, such as food and water intake, metabolic hormones and neuroendocrine parameters. This study examined important hormonal and metabolic health issues by testing the hypotheses that dietary soy-derived isoflavones influence: 1) body weight and adipose deposition, 2) food and water intake, 3) metabolic hormones (i.e., leptin, insulin, T3 and glucose levels), 4) brain neuropeptide Y (NPY) levels, 5) heat production …

New Product Launch Decisions Under Competition And Uncertainty: A Real Options And Game-Theoretic Approach To New Product Development, James O. Ostler

Theses and Dissertations

New product development is central to many firms' future success. Not only as a means to continue to maintain their piece of the market, but product development can also be a strategic means for a company to diversify, and/or alter focus to adapt to changing market conditions.

Most of the research in new product development has been on how to do it cheaper and faster than the next guy. However, early commercialization does not guarantee a position of strength in the market. Failures of EMI in CT scanners and Xerox in personal computers illustrate that being first to market does …

Atomic Force Microscope Conductivity Measurements Of Single Ferritin Molecules, Degao Xu

Theses and Dissertations

Conductive Atomic Force Microscope (c-AFM) was used to measure the conductivity of single horse spleen ferritin (HoSF) and azotobacter vinelandii bacterial ferritin (AvBF) molecules deposited on flat gold surfaces. A 500 micron diameter gold ball was also used as a contact probe to measure the conductivity of a thin film of ferritin molecules. The average current measured for holo HoSF was 13 and 5 times larger than that measured for apo HoSF as measured by c-AFM at 1V and gold ball at 2V and respectively, which indicates that the core of ferritin is more conductive than the protein shell and …

The Strength Of Multidimensional Item Response Theory In Exploring Construct Space That Is Multidimensional And Correlated, Steven Gerry Spencer

Theses and Dissertations

This dissertation compares the parameter estimates obtained from two item response theory (IRT) models: the 1-PL IRT model and the MC1-PL IRT model. Several scenarios were explored in which both unidimensional and multidimensional item-level and personal-level data were used to generate the item responses. The Monte Carlo simulations mirrored the real-life application of the two correlated dimensions of Necessary Operations and Calculations in the basic mathematics domain. In all scenarios, the MC1-PL IRT model showed greater precision in the recovery of the true underlying item difficulty values and person theta values along each primary dimension as well as along a …

Identification Of Proteins Involved In Chloroplast Dna Replication, Matthew G. Lassen

Theses and Dissertations

Chapter 1

Chloroplast nucleoids (ct-nucleoids) are DNA/protein complexes involved in compacting the chloroplast genome, and may play a role in regulating DNA replication. Ct-nucleoids were isolated from young soybean plants and separated by 2-D gel electrophoresis. Gel spots were excised and analyzed by MALDI-ToF mass spectrometry, resulting in several protein identifications. The proteins identified all have functions unrelated to DNA replication. While some of these proteins may be due to contamination, it is possible that some of these proteins are dual-functional, playing direct roles in the regulation of DNA replication.

Chapter 2

A 28 kDa soybean protein was isolated by …

Distribution Of Chemistry And Sexual Fecundity In The Lichenized-Fungi, Xanthoparmelia Cumberlandia And Xanthoparmelia Coloradoensis On Boulder Mountain, Aquarius Plateau, Ut, Heather Bird Jackson

Theses and Dissertations

Three aspects of Xanthoparmelia cumberlandia and Xanthoparmelia coloradoënsis populations found at two elevations are explored: clustering of secondary chemicals and the resulting implications for taxonomic distinctions, the usefulness of thallus size as an indirect measure of sexual fecundity, and the frequency of sexual reproduction.

First, we use clustering of 46 chemicals produced by X. cumberlandia and X. coloradoënsis to evaluate the adequacy of the current taxonomic distinction between them. Using principal components analysis and UPGMA, we find that the currently recognized species boundaries indicated by the presence of stictic acid in X. cumberlandia and salazinic acid in X. coloradoënsis are …

Phosphorylation Of Skeletal Muscle Acetyl-Coa Carboxylase By Ampk Enhances Palmitoyl-Coa Inhibition, Dustin S. Rubink

Theses and Dissertations

Acetyl-CoA carboxylase (ACC) catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism. ACC beta or 2 has been shown to be localized on the mitochondria in close proximity to carnintine palmitoyl transferase 1 (CPT-1), the enzyme responsible for the influx of acyl-CoA into the matrix where beta oxidation takes place. CPT-1 is inhibited by malonyl-CoA produced by ACC. It has been well documented that AMP activated kinase (AMPK) when activated phosphorylates and inactivates ACC. ACC is controlled allosterically by citrate, which activates, and by palmitoyl-COA, which inhibits. In this study, we asked the question, …

Neglected Taxonomy Of Rare Desert Fishes: Congruent Evidence For Two Species Of Leatherside Chub, Jerald B. Johnson, Thomas E. Dowling, Mark C. Belk

Faculty Publications

Conservation biologists rely heavily on taxonomy to set the scope for biological monitoring and recovery planning of rare or threatened species. Yet, taxonomic boundaries are seldom evaluated as falsifiable hypotheses that can be statistically tested. Here, we examine species boundaries in leatherside chub (Teleostei, Cyprinidae), an imperiled desert fish native to the Bonneville Basin and upper Snake River drainages of western North America. Recent molecular data hint that this fish could be composed of two distinct taxa that are geographically separated into northern and southern species. To formally test this hypothesis, we evaluated leatherside chub using several different categories of …

Ip Algorithm Applied To Proteomics Data, Christopher Lee Green

Theses and Dissertations

Mass spectrometry has been used extensively in recent years as a valuable tool in the study of proteomics. However, the data thus produced exhibits hyper-dimensionality. Reducing the dimensionality of the data often requires the imposition of many assumptions which can be harmful to subsequent analysis. The IP algorithm is a dimension reduction algorithm, similar in purpose to latent variable analysis. It is based on the principle of maximum entropy and therefore imposes a minimum number of assumptions on the data. Partial Least Squares (PLS) is an algorithm commonly used with proteomics data from mass spectrometry in order to reduce the …

Evolution And Phylogeny Of Basal Winged Insects With Emphasis On Mayflies (Ephemeroptera), Thomas H. Ogden

Theses and Dissertations

Ephemeroptera (mayflies) is a monophyletic group of semi-aquatic pterygote insects, comprising 3083 species, 376 genera, and 37 described families and are present on all continents, excluding Antarctica, being associated with freshwater and brackish water habitats. The order is unique among pterygote insects in possessing functional wings at the penultimate molt (subimago stage), prior to the full development of genitalia; in all other insects the presence of functional wings occurs only after the final molt. The purpose of this dissertation is to use molecular and morphological data, in order to investigate the position of the order Ephemeroptera among other insect orders, …

Density Effects On Growth, Survival And Diet Of June Sucker (Chasmistes Liorus): A Component Allee Effect In An Endangered Species., David Barrett Gonzalez

Theses and Dissertations

Density-dependence is considered one of the most important regulators of population growth, and it has been documented across a wide variety of species. Typically, population growth rate and components thereof decline with increasing density (i.e., negative density-dependence); however, in species that exhibit high population densities and social behavior, positive density-dependence (i.e., Allee effect) may occur at low density. June sucker, a federally endangered lake sucker endemic to Utah Lake, Utah, USA, occurred historically at high density, and it exhibits coordinated feeding behavior. These characteristics indicate a potential for the existence of an Allee effect at current low population densities. To …

Polarimetric Temperature Sensor Using Core-Replaced Fiber, Benjamin L. Ipson

Theses and Dissertations

Optical fibers are increasingly being used to create sensing devices. The D-fiber has an elliptical core and exhibits birefringence. This birefringence can be used to create a polarimetric sensor. The elliptical core supports two orthogonal modes that have separate effective indices of refraction. The indices of refraction change with a change in temperature. Since the effective indices of refraction change differently for the two modes, the birefringence also changes. This change in birefringence can be seen as a change in detected power through the fiber through the use of polarizers. The fiber then becomes a temperature sensor. The sensitivity of …

How Cellular Movement Determines The Collective Force Generated By The Dictyostelium Discoideum Slug, J. C. Dallon, H. G. Othmer

Faculty Publications

How the collective motion of cells in a biological tissue originates in the behavior of a collection of individuals, each of which responds to the chemical and mechanical signals it receives from neighbors, is still poorly understood. Here we study this question for a particular system, the slug stage of the cellular slime mold Dictyostelium discoideum. We investigate how cells in the interior of a migrating slug can effectively transmit stress to the substrate and thereby contribute to the overall motive force. Theoretical analysis suggests necessary conditions on the behavior of individual cells, and computational results shed light on experimental …

Leafhopper Assemblages On Native And Reseeded Grasslands In Southwestern Montana, James A. Bess, Kevin M. O'Neill, William P. Kemp

Western North American Naturalist

Using sweep samples, we surveyed leafhoppers (Homoptera: Cicadellidae) on grassland sites in the Gallatin Valley of Montana during 1988 and 1991. We sampled 12 sites representing 2 habitat types defined by their dominant plant species in an undisturbed state (Stipa comata / Bouteloua gracilis and Festuca idahoensis / Agropyron spicatum). At half of the sites the native plant communities were present, whereas the remainder had been reseeded with either Agropyron spicatum (to replace the S. comata / B. gracilis assemblage) or Bromus inermis (to replace the F. idahoensis / A. spicatum assemblage). We found at least 66 …

The Male Of Culicoides Reevesi Wirth, With A Redescription Of The Female And New Seasonal Activity, Distribution, And Biting Records (Diptera: Ceratopogonidae), William L. Grogan Jr., Gustavo R. Spinelli, Robert A. Phillips, David L. Woodward

Western North American Naturalist

The previously unknown male of the biting midge, Culicoides reevesi Wirth, is described and illustrated; the female is also redescribed and this species is reassigned to the leoni group. Previously known from California, Arizona, and New Mexico, C. reevesi is recorded for the 1st time from Utah (new record). Females of this aggressive, hematophagous species were collected while biting humans during evening crepuscular periods in California. Females exhibited a strong attraction to CO₂ traps, and seasonal surveillance demonstrated that host-seeking occurred from late May until mid-October in both California and Utah. Small numbers of males were also …

First Pleistocene Jumping Mouse (Zapus, Zapodinae, Rodentia) From Utah, Dennis R. Ruez Jr., Christopher J. Bell

Western North American Naturalist

Two of the Little Dell Dam fossil localities produced the 1st Pleistocene records of the jumping mouse Zapus from Utah. We describe these teeth in detail and compare their morphology with both extinct and extant jumping mouse taxa. Although it is not possible to confidently assign these specimens to a particular species, the Little Dell Dam fossils are clearly distinct from the only living jumping mouse (Zapus princeps) currently known from Utah. The paracone is attached to the rest of the occlusal surface of the upper 1st and 2nd molars in modern Z. princeps from Utah; the paracone …

Reproduction And Demography Of Townsendia Aprica (Asteraceae), A Rare Endemic Of The Southern Utah Plateau, Vincent J. Tepedino, Sedonia D. Sipes, Terry L. Griswold

Western North American Naturalist

Townsendia aprica (Asteraceae: Astereae), a rare pulvinate perennial of the Southern Utah Plateau, was listed as threatened under the U.S. Endangered Species Act in 1985. Here we report on the reproductive biology and pollination of this little-known species and provide an estimate, for a single site-year, of size-specific reproductive effort. Last Chance townsendia appears a short-lived perennial that begins reproducing in its 2nd year (1.5–2.0 cm diameter). Maximum reproductive effort is attained with the 2.5–4.0 cm diameter size class: 38% of these plants produced 84% of the flower heads. Few plants survived past the 4-cm size class. The species is …

Marmot Distribution And Habitat Associations In The Great Basin, Chris H. Floyd

Western North American Naturalist

In this study I describe the distribution and habitat associations of yellow-bellied marmots (Marmota flaviventris) in the Great Basin, compare my findings with those of E.R. Hall during his 1929–1936 survey and later surveys, and discuss potential reasons for changes in marmot distribution over time. I found 62 marmot burrow sites in 18 mountain ranges, mostly in rocky meadows situated on well-drained slopes between 2100 m and 3000 m elevation. Marmots were generally found near burrows dug within talus slopes, talus-like rock piles, or clusters of massive boulders. Oceanspray (Holodiscus discolor) was the shrub most commonly …

Dynamics Of A Dwarf Bear-Poppy (Arctomecon Humilis) Population Over A Sixteen-Year Period, K. T. Harper, Renée Van Buren

Western North American Naturalist

A population of the dwarf bear-poppy (Arctomecon humilis Coville, Papaveraceae) at Red Bluff, Washington County, Utah, was monitored twice annually between 1987 and 2002. This is a narrowly endemic, gypsophilous species that has been formally listed as endangered since 1979. During the 16 years of observation, density of this species has fluctuated between 3 and 1336 individuals on the 0.07-ha monitoring plot. Moderate to large recruitments of seedlings occurred in 1992, 1995, and 2001. Seedling recruitments from a large, long-lived seed bank are triggered by abundant precipitation during the February–April period. At least 5.0 cm of rainfall is required …

Life Cycle Of The Net-Spinning Caddisfly, Cheumatopsyche Analis (Banks) (Trichoptera: Hydropsychidae), In Two Small Front Range Urban Streams, Fort Collins, Colorado, Robert E. Zuellig, Boris C. Kondratieff, Richard A. Thorp

Western North American Naturalist

The life cycle of Cheumatopsyche analis (Banks) is described from 2 urban streams located in north central Colorado. Larvae were collected every 15 days during spring, summer, and fall and every 30 days in winter from August 1999 through August 2000. A total of 8652 larvae were collected, and head capsules were measured to the nearest 0.01 mm. The life cycle of C. analis at both sites appears to be partially bivoltine with a long, almost continuous period of recruitment after peak emergence in June. Some offspring from the early generation that emerges in May probably emerge as adults in …

Fleas (Siphonaptera: Ceratophyllidae, Ctenophthalmidae) From Rodents In Five Southwestern States, Glenn E. Haas, Nixon Wilson, Chris T. Mcallister

Western North American Naturalist

Nine species of fleas were collected incidental to a survey of rodents for molecular studies in Arizona, Colorado, New Mexico, Texas, and Utah, south of latitude 38°N. Three species were parasites of woodrats, Neotoma spp.: Orchopeas neotomae Augustson was confirmed for Texas, and the distribution patterns of O. agilis (Rothschild) and O. schisintus (Jordan) were more clearly defined. Four species were parasites of mice, Peromyscus spp.: Aetheca wagneri (Baker) was a new flea for P. gratus Merriam, the distribution of O. leucopus (Baker) was extended to far west Texas, Plusaetis sibynus (Jordan) was new for Utah and N. lepida, …

The Centipede Genus Arthrorhabdus Pocock, 1891, In The Western Hemisphere: Potential Occurrence Of A. Pygmaeus (Pocock, 1895) In Belize (Scolopendromorpha: Scolopendridae: Scolopendrinae), Rowland M. Shelley, Amazonas Chagas-Júnior

Western North American Naturalist

The scolopendrid centipede genus Arthrorhabdus Pocock, 1891, comprises 6 species: A. formosus Pocock, 1891, the type species, occurring in southern Africa (Mpumalanga, Free State, Western and Northern Cape Provinces, South Africa, and southern Namibia); A. somalus Manfredi, 1933, in Somalia and Yemen; A. jonesii Verhoeff, 1938, from southern India (Kerala Province); A. mjobergi Kraepelin, 1916, and A. paucispinus Koch, 1984, in Australia (Western and South Australia, Northern Territory, and Queensland); and A. pygmaeus (Pocock, 1895), in the south central and southwestern United States, Mexico, and, potentially, Belize. This sporadic occurrence suggests that the genus is polyphyletic, and the monotypic synonym, …

First Nesting Record Of Black-Throated Gray Warbler (Dendroica Nigrescens) For Montana, Paul Hendricks

Western North American Naturalist

No abstract provided.