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Factors Affecting Tree Swallow (Tachycineta Bicolor) Nestling Resting Metabolic Rate, Brooke M. Piepenburg

All College Thesis Program, 2016-2019

Metabolism is the major force that maintains the most rudimentary of functions, and, therefore, maintains life in every organism. Because of the immense effect metabolism can have on an individual’s life history, it is key that the factors influencing metabolic rate are investigated. This study was designed to investigate the influential factors affecting Tree swallow, Tachycineta bicolor, nestling resting metabolic rates by observing maternal effects, early developmental conditions, age, and body mass in Tree swallow nestlings within collection sites at the Saint John’s Abbey Arboretum and Kraemer Lake-Wildwood County Park in Stearns County, Minnesota. Due to the fact that …

Parental Influences On The Behavior Of A Juvenile Bornean Orangutan (Pongo Pygmaeus), Raechel Mcumber, Sarah Robarts, Gregory B. Cunningham

The Review: A Journal of Undergraduate Student Research

Here we discuss the influence of the mother and father on the behaviors of a juvenile Bornean Orangutan (Pongo pygmaeus). This species is known for being solitary and asocial, in that males and females do not live together, while living in their natural environment. However, adults are usually housed together in zoo settings. We observed a juvenile and both of her parents in their zoo enclosure and recorded the play and parentally influenced behaviors, such as swinging and eating, performed by the juvenile. It was found that the juvenile played and performed parentally influenced behaviors significantly more while in …

Modulation Of Colorectal Cancer By The Probiotic Organism Lactobacillus Reuteri, Camara A. Blasingame, Leonard H. Billups, Thomas Graham, Janell Henry, Brianna Carter, David W. Threadgill, A. Deloris Alexander

Professional Agricultural Workers Journal

Abstract

Probiotics are beneficial to gastrointestinal health and have anti-inflammatory properties. An experiment was conducted to determine if L. reuteri could protect mice from azoxymethane-induced colorectal cancer (AOM-CRC). A/J mice were randomly assigned to controls, pre-treatment, or post-treatment groups. The mice in the groups were injected with 10mg/kg body weight of AOM and treated with L. reuteri; given only AOM; given only L. reuteri; or given neither AOM nor L. reuteri. At the end of a 26-week latency period, the mice were euthanized, dissected, and colons examined for tumors. L. reuteri did not protect animals against tumor …

No Effect Of Blood Sampling Or Phytohaemagglutinin Injection On Postfledging Survival In A Wild Songbird, Emerson Keith Bowers, Charles F. Thompson, Scott K. Sakaluk

Faculty Publications – Biological Sciences

The injection of phytohaemagglutinin (PHA) and sampling of blood are widelyused in studies of wild vertebrates to assess components of immune and endo-crine function and health state and to obtain genetic material. Despite the per-vasive use of these techniques in the life sciences, their potential effects onsurvival are rarely considered. For example, whether injection of the immuno-gen PHA into body parts critical for locomotion (e.g., the prepatagium, or wingweb, in birds) affects survival has not been tested. Here, we test whether injec-tion of PHA into the wing web and blood sampling from nestling house wrensaffects their subsequent recruitment and survival …

An Analysis Of Bacterial Contamination Of Chicken Eggs And Antimicrobial Resistance, Holly Spitzer

All College Thesis Program, 2016-2019

Chicken eggs are a major component of American diets, with an average yearly consumption of approximately 250 eggs per person (American Humane Society). While highly nutritious, eggs are also one of the leading causes of food poisoning and food borne illness in the United States. Eggs may become contaminated by a number of different types of bacteria during production, including Salmonella, a group of bacteria that, according to the CDC, causes more than 1.2 million cases of food borne illness in the United States every year. In an effort to decrease the frequency of bacterial contamination, many food producers …

Hunting, Food Subsidies, And Mesopredator Release: The Dynamics Of Crop-Raiding Baboons In A Managed Landscape, Rachel A. Taylor, Sadie J. Ryan, Justin S. Brashares, Leah R. Johnson

Integrative Biology Faculty and Staff Publications

The establishment of protected areas or parks has become an important tool for wildlife conservation. However, frequent occurrences of human-wildlife conflict at the edges of these parks can undermine their conservation goals. Many African protected areas have experienced concurrent declines of apex predators alongside increases in both baboon abundance and the density of humans living near the park boundary. Baboons then take excursions outside of the park to raid crops for food, conflicting with the human population. We model the interactions of mesopredators (baboons), apex predators, and shared prey in the park to analyze how four components affect the proportion …

Characterization Of Ammonium Salt Toxicity In Cabbage Family Plants, Madison Boudreaux

Honors Capstones

No abstract provided.

Development Of Mouse Melanoma Model To Evaluate Oncolytic Viral Therapy Using Osv, Kelli A. Clemons

Honors Capstones

No abstract provided.

The Function Of Second-Order Male Alliances In St. Johns River Dolphins (Tursiops Truncatus), Arien D. Widrick

UNF Undergraduate Capstone Projects and Honors Theses

Bottlenose dolphins (Tursiops truncatus) have a sexually segregated fission-fusion society, in which males and females form different types of social groups for different purposes. Social interactions among dolphins are frequent, and group composition changes just as often. Male-male association patterns reveal the formation of alliances, which range in complexity. Recently, second-order alliance formation was confirmed in the St. Johns River, but the function of these alliances is unknown. To investigate their function, this research analyzes the seasonality of first and second-order alliance formation, and whether female presence plays a role. It was hypothesized that higher level male alliances form in …

The Effect Of Seasonal Fish Migration On Energy Budgets In Two Coastal Michigan Streams, Emily M. Dean

Masters Theses

Migratory fish are known to seasonally enter coastal stream systems but the magnitude of the effects these migrations have on stream energy budgets is not fully understood. The Laurentian Great Lakes have several introduced and native adfluvial fish, where only a few studies have investigated the impacts of their migration on energy budgets in Michigan coastal streams. We quantified the contribution of energy from Chinook salmon (Oncorhynchus tshawytscha) muscle and eggs, steelhead (Oncorhynchus mykiss) eggs, and larval white suckers (Catostomus commersonii) to coastal stream energy budgets. Energy densities and energy delivered to streams were estimated using bomb calorimetry and annual …

Naturalization Of Salt Marsh Restoration Sites In The Elizabeth River, Virginia, Assessed By Feeding Activity And Trophic Level Of Mummichogs (Fundulus Heteroclitus), Moriah Anne Good

Biological Sciences Theses & Dissertations

Recent efforts to mitigate environmental issues within the Southern Branch of the Elizabeth River, Virginia, designated a “Region of Concern” by the Chesapeake Bay Program, include several salt marsh restorations. By examining gut contents and stable isotopes values (δ13C and δ15N) from mummichogs (Fundulus heteroclitus), the functional equivalency of restored salt marshes compared to natural marshes was measured. In July 2013 I collected mummichogs from three restored and three reference salt marshes in the Southern Branch. Fish were collected for gut content analysis and were analyzed for stable isotopes (δ13C and δ15N).

I removed gut contents from 16 fish per …

Improved Pcr-Based Detection Of Soil Transmitted Helminth Infections Using A Next-Generation Sequencing Approach To Assay Design, Nils Pilotte, Marina Papaiakovou, Jessica R. Grant, Lou Ann Bierwert, Stacey Llewllyn, James S. Mccarthy, Steven A. Williams

Biological Sciences: Faculty Publications

The soil transmitted helminths are a group of parasitic worms responsible for extensive mor- bidity in many of the world’s most economically depressed locations. With growing empha- sis on disease mapping and eradication, the availability of accurate and cost-effective diagnostic measures is of paramount importance to global control and elimination efforts. While real-time PCR-based molecular detection assays have shown great promise, to date, these assays have utilized sub-optimal targets. By performing next-generation sequencing- based repeat analyses, we have identified high copy-number, non-coding DNA sequences from a series of soil transmitted pathogens. We have used these repetitive DNA elements as targets …

In Vitro And In Vivo Antioxidant Capacity Of Synthetic And Natural Polyphenolic Compounds Identified From Strawberry And Fruit Juices, Marvin Abountiolas

USF Tampa Graduate Theses and Dissertations

Strawberries can be considered a functional food because their consumption has been associated with several health benefits. They are important sources of bioactive compounds, such as vitamins and polyphenolic compounds, with recognized antioxidant capacity (AOC). However, strawberry overall quality and bioactive content are greatly affected by environmental conditions during pre- and post-harvest and, little is known about the stability of its bioactive compounds, specifically ascorbic acid (AA) and polyphenolics compounds. Furthermore, additional research that addresses the impact of polyphenolic compounds on in vitro and in vivo models is needed to understand the mechanisms behind their potential health benefits. Therefore, the …

An Investigation Into B Cells In Peripheral Blood And Gut Associated Lymphoid Tissues In The Red Eared Slider Turtle, Trachemys Scripta, Sarah Marie Marrochello

Theses and Dissertations

As in endotherms, immunity in ectotherms is vital to survival and contributes to the overall fitness of an organism. For reptilians, there are a number of environmental factors, such as temperature, season, and pathogen prevalence, which are known to influence both innate and adaptive immunity. Of particular interest, is the effect of these factors on B cells, a component of adaptive immunity. Reptilian B cells are reported to secrete antibodies, much like their mammalian counterparts, and undergo phagocytosis. The work reported here primarily focused on understanding the effect of environmental temperature, incubation temperature, and nesting season on B cells in …

The Engaged Microbiologist: Bringing The Microbiological Sciences To The K-12 Community, David J. Westenberg

Biological Sciences Faculty Research & Creative Works

Exposing K-12 students to cutting edge science that impacts their daily lives can bring classroom lessons to life. Citizen-science projects are an excellent way to bring high-level science to the classroom and help satisfy one of the cornerstone concepts of the Next Generation Science Standards (NGSS), "engaging in practices that scientists and engineers actually use." This can be a daunting task for teachers who may lack the background or resources to integrate these projects into the classroom. This is where scientific societies such as the American Society for Microbiology (ASM) can play a critical role. ASM encourages its members to …

Challenges And Opportunities In The Culture Of Giant Freshwater Prawn In The Philippines, Janice A. Ragaza

Biology Faculty Publications

Amid the irremediable decline of capture fisheries, the Philippine government has identified aquaculture as a sector that will ensure food security and generate new job opportunities geared toward the country’s goal of economic development (Nagothu and Ortiz 2007). Aquaculture of giant freshwater prawn Macrobrachium rosenbergii (Fig. 1) is an emerging program that is intended to expand and vary the aquatic species used in freshwater aquaculture, which is still predominantly based on tilapia (Rosario and Tayamen 2004). Attractive characteristics of freshwater prawn culture include ease of breeding, high hatching rate, superior quality of meat and high market value (Keysami and Mohammadpour …

Associations Between Ectomycorrhizal Fungi And Bacterial Needle Endophytes In Pinus Radiata: Implications For Biotic Selection Of Microbial Communities, Megan A. Rúa, Emily C. Wilson, Sarah Steele, Arielle R. Munters, Jason D. Hoeksema, Anna C. Frank

Biological Sciences Faculty Publications

Studies of the ecological and evolutionary relationships between plants and their associated microbes have long been focused on single microbes, or single microbial guilds, but in reality, plants associate with a diverse array of microbes from a varied set of guilds. As such, multitrophic interactions among plant-associated microbes from multiple guilds represent an area of developing research, and can reveal how complex microbial communities are structured around plants. Interactions between coniferous plants and their associated microbes provide a good model system for such studies, as conifers host a suite of microorganisms including mutualistic ectomycorrhizal (ECM) fungi and foliar bacterial endophytes. …

Life Line March 2016, Otterbein Biology And Earth Science Department

Life Line - The Biology Department Newsletter

Department welcomes Dr. Elizabeth Berkeley - Ben Titus '08 - Panama Research - Fracing in Toga County, PA. - Students Intern in China - Faculty Partnerships in Africa

Ectomycorrhizal Fungi Decompose Soil Organic Matter Using Oxidative Mechanisms Adapted From Saprotrophic Ancestors, Firoz Shah, César Nicolás, Johan Bentzer, Magnus Ellström, Mark Smits, Francois Rineau, Björn Canbäck, Dimitrios Floudas, Robert Carleer, Gerald Lackner, Jana Braesel, Dirk Hoffmeister, Bernard Henrissat, Dag Ahrén, Tomas Johansson, David S. Hibbett, Francis Martin, Per Persson, Anders Tunlid

Biology

Ectomycorrhizal fungi are thought to have a key role in mobilizing organic nitrogen that is trapped in soil organic matter (SOM). However, the extent to which ectomycorrhizal fungi decompose SOM and the mechanism by which they do so remain unclear, considering that they have lost many genes encoding lignocellulose-degrading enzymes that are present in their saprotrophic ancestors. Spectroscopic analyses and transcriptome profiling were used to examine the mechanisms by which five species of ectomycorrhizal fungi, representing at least four origins of symbiosis, decompose SOM extracted from forest soils. In the presence of glucose and when acquiring nitrogen, all species converted …

Calcification Rates Indicate Thermal Stress Tolerance In Belize “Backreef” Corals, David D. Jones

Undergraduate Research Symposium

Reef-building corals host symbiotic algae known as zooxanthellae living within their tissues. Exposure to prolonged elevated temperature can cause corals to expel their symbionts and lead to coral bleaching. In this study, corals from Florida and Belize inshore reefs (high temperature variability) and offshore reefs (low temperature variability) were subjected to a 6-week-long heat stress experiment to determine if inshore corals displayed higher stress tolerance than offshore samples. Measurements of calcification rates suggested that Belize’s inshore or “BackReef” corals demonstrated the greatest growth and stress tolerance. Ongoing symbiont density measurements will provide further clues to stress tolerance.

Distribution And Abundance Of Glucocorticoid And Mineralocorticoid Receptors Throughout The Brain Of The Great Tit (Parus Major), Rebecca A. Senft , '15, S. L. Meddle, Alexander T. Baugh

Biology Faculty Works

The glucocorticoid stress response, regulated by the hypothalamic-pituitary-adrenal (HPA) axis, enables individuals to cope with stressors through transcriptional effects in cells expressing the appropriate receptors. The two receptors that bind glucocorticoids—the mineralocorticoid receptor (MR) and glucocorticoid receptor (GR)—are present in a variety of vertebrate tissues, but their expression in the brain is especially important. Neural receptor patterns have the potential to integrate multiple behavioral and physiological traits simultaneously, including self-regulation of glucocorticoid secretion through negative feedback processes. In the present work, we quantified the expression of GR and MR mRNA throughout the brain of a female great tit (Parus major), …

Possible Orthologs Of Trpa And Trpb Genes Between E. Coli (B1260 And B1261) And M. Ruber (Mrub_1512 And Mrub_1511), John J. Stenger, Dr. Lori Scott

Meiothermus ruber Genome Analysis Project

Mrub_1512 encodes the enzyme tryptophan A (DNA coordinates 1544300..1545091), which is the 6th step of the Tryptophan Biosynthesis pathway (KEGG map number 00400). It catalyzes the conversion of Chorismate to L-Tryptophan. The E. coli K12 MG1655 ortholog is predicted to be b1260, which has the gene identifier trpA. We predict that Mrub_1512 (DNA coordinates 1544300..1545091) is a alpha subunit of the Tryptophan Synthase (KEGG map number 00400). Mrub_1511 encodes the enzyme tryptophan B (DNA coordinates 1543083..1544303), which is the 7th step of the Tryptophan Biosynthesis pathway (KEGG map number 00400). It catalyzes the conversion of Chorismate to L-Tryptophan. The E. …

Gascoyne Demersal Scalefish Managed Fishery, Department Of Fisheries

Fisheries Occasional Publications

An operators’ guide to the management arrangements 1 September 2015 – 31 August 2016.

Herbivore Density Mediates The Indirect Effect Of Herbivores On Plants Via Induced Resistance And Apparent Competition, Ricardo A. Ramirez, Micky D. Eubanks

Biology Faculty Publications

Herbivore-induced plant resistance and apparent competition are two indirect ways herbivores interact. If a less damaging herbivore indirectly suppresses the abundance of a more damaging herbivore via these mechanisms, then plants may ultimately benefit. Changes in herbivore density, however, can dictate the intensity of species interactions and may play a critical role in determining the outcome of plant- and predator-mediated herbivore interactions. We tested the effects of herbivore density on the strength of indirect interactions among phloem-feeding aphids and herbivorous caterpillars and the outcome of these interactions for their shared host plant, cotton (Gossypium hirsutum). We quantified the …

Beyond The Fiber: Novel Spider Silk Coatings And Adhesives, Danielle A. Gaztambide, Breton A. Day

Research on Capitol Hill

Natural spider silks have long been recognized for their combination of incredible strength and elasticity. Spider silk is more elastic than nylon, tougher than Kevlar, and stronger than steel by weight. Due to an inability to farm spiders, much work has been done to produce spider silks in transgenic hosts for large -scale production. Our work was done using recombinant spider silk proteins produced in transgenic goats and the bacteria E. coli.

More recently spider silks have also been recognized for their biocompatibility and lack of immunogenicity. Spider silks' incredible strength and ability to be implanted safely within the body …

Membrane Glycerolipidome Of Soybean Root Hairs And Its Response To Nitrogen And Phosphate Availability, Fang Wei, Brian Fanella, Liang Guo, Xuemin Wang

Biology Department Faculty Works

Root hairs are tubular extensions of specific root epidermal cells important in plant nutrition and water absorption. To determine membrane glycerolipids in root hairs and roots may differ, as well as their respective response to nutrient availability, this study analyzed the membrane glycerolipid species in soybean root hairs and in roots stripped of root hairs, and their response to nitrogen (N) and phosphate (Pi) supplementation. The ratio of phospholipids to galactolipids was 1.5 fold higher in root hairs than in stripped roots. Under Pi deficiency, the ratio of phospholipids to galactolipids in stripped roots decreased with the greatest decrease found …

Sex-Specific Fungal Communities Of The Dioicous Moss Ceratodon Purpureus, Mehmet Ali Balkan

Dissertations and Theses

Mosses display a number of hallmark life history traits that influence their ecology at the population and community level. The long lived separation of sexes observed in the haploid gametophyte (dioicy) is one such feature of particular importance, as it is observed in the majority of bryophytes and creates intraspecific specialization of male and female individuals.

The prevalence of sexually dimorphic mosses raises the possibility of sex-specific interactions with fungi as observed in some vascular plants. Here I investigated how moss sex shapes fungal communities associated with gametophytic tissues of the ubiquitous moss, Ceratodon purpureus. Using greenhouse populations of …

Cloning And Abiotic Stress Resistance Analyses Of A New Proline-Glycine-Alaninehistidine-Rich Protein Gene From Ipomoea Batatas (L.) Lam., Xiang Tao, Bin Yong, Huan-Huan Shao, Xin-Rong Ma

Turkish Journal of Biology

Sweet potato [Ipomoea batatas (L.) Lam.] is one of the top six most important crops in the world in terms of production. It has the capacity to tolerate marginal growing conditions better than most other crops. In this study, a proline- and glycine-rich protein encoding gene, IbPGAHRP1, was isolated and characterized from the transcriptome of sweet potato cultivar Xushu 18. Sequence analyses showed that proline, glycine, alanine, and histidine account for 62.6% of the total amino acid residues. Two proline-rich tandem repeats, an alanine-rich repeat, a histidine-rich tandem repeat, and five XYPP motifs were present in IbPGAHRP1. Sequence similarity analysis …

High Levels Of Polyphosphate Kinase Affect Not Only Endotoxin Production But Also Acid Tolerance Of Bacillus Thuringiensis, Tuğrul Doruk, Zeynep Gi̇rgi̇n Ersoy, Mehmet Sali̇m Öncel, Sedef Tunca Gedi̇k

Turkish Journal of Biology

Inorganic phosphate is stored as a polyphosphate (polyP) polymer inside every living cell. This polymer is synthesized by the polyP kinase (PPK) enzyme using the terminal phosphate of ATP as substrate and it performs important functions in the cell. In this study, effects of high levels of PPK on Bacillus thuringiensis subsp. israelensis were analyzed. Recombinant Bti ppk, a PPK overproducer, was found to uptake more phosphate into the cell and produce a consistently higher amount of endotoxin than the wild type under culture conditions including a range of temperatures (25 °C, 30 °C, and 37 °C), pH values (pH …

High Dietary Fructose Load Aggravates Lipid Metabolism In The Liver Of Wistar Rats Through Imbalance Between Lipogenesis And Fatty Acid Oxidation, Ana Teofilovic, Biljana Bursac, Ana Djordjevic, Danijela Vojnovic Milutinovic, Gordana Matic, Natasa Velickovic

Turkish Journal of Biology

Fructose ingestion is often associated with hepatic steatosis and hypertriglyceridemia. The homeostasis of hepatic lipids is mainly determined by the interplay of lipogenesis and fatty acid β-oxidation. In this study, we hypothesized that high fructose intake disturbs hepatic lipid metabolism through an imbalance between these processes. Therefore, we analyzed the effects of a 9-week-long consumption of a 60% fructose solution on physiological parameters, glycemia, and blood lipid profiles in male Wistar rats. The expression of key regulators of fatty acid oxidation (FAO) and lipogenesis in the liver were assessed by western blot and quantitative polymerase chain reaction. The results showed …