Digital Commons Network^™

Limestone Flora Of The Simonton Corner Quarry Preserve, Rockport, Maine, Usa, Margaret Stern, Ian D. Medeiros, Luka Negoita, N. Rajakaruna

Biological Sciences

Limestone is a distinctive substrate that has significant effects on soils and plants. The present study characterizes the diversity of vascular plants, bryophytes, and lichens at the Simonton Corner Quarry Preserve, an abandoned limestone quarry in Rockport, Maine, USA, which was in operation in the late 1800s. We document vascular plant diversity and associated edaphic features (i.e., soil pH and elemental chemistry) using 30 535 meter plots spread throughout the site. For vascular plants, 114 species in 96 genera and 50 families were observed; few of these species are known to prefer calcareous environments, and 38% are nonnative. Conversely, the …

Comparison Of Commercial Gecko Food On Growth Of Rhacodactylus Geckos, Kaitlin Leigh Richard

Honors Projects

Available food sources can provide a different effect on the growth rates of Rhacodactylus auriculatus. In this study three food sources were compared, Repashy MRP, Pangea super foods, and GeckoPro New Caledonian blend. These are composed of similar nutrients but tend to have some points where they vary. Thirty-six gargoyle geckos were put through a trial over a 14 week period to determine which commercially available food source provides the best nutrients for growth, as measured by weight gain. Three groups of twelve were chosen based on a variety of ages and sizes to be given three different foods …

Social And Scientific Implications Of Genetic Testing In The Digital Age, Yaruska A. Ordinola

Senior Honors Projects

From Mendel’s law of inheritance in the 19th century through Watson and Crick’s revolutionary observations of the double helix in the 20th century, genetics has been a fascinating and continuing topic of discussion in the field of science (Collins & McKusick, 2001). Major studies like the Human Genome Project (HGP), initiated in 1990 and completed in 2003, provided a starting point from which scientists could more thoroughly investigate the human condition on a genetic level. Arising from this study, personal genomics is considered a blooming field in genetics- in which rapidly developing technological advances are able to provide easier and …

Rac1 And Ire1 Are Required To Prevent Early Loss Of Intestinal Homeostasis In Drosophila Melanogaster, Mauricio M. Ortega

Dissertations, Masters Theses, Capstones, and Culminating Projects

No abstract available

Optimizing Pharmacological Lifespan Extension: Testing Chemical Compounds For Additive Effects On Longevity, Elizabeth Chao

Dissertations, Masters Theses, Capstones, and Culminating Projects

No abstract available

Scale-Dependent Contributions Of Abiotic And Biotic Factors To Tree Species Composition Patterns In The Us Rocky Mountains, Paige E. Copenhaver-Parry

Faculty Publications - Department of Biological & Molecular Science

Scale-dependence is recognized as a ubiquitous feature of ecological systems. Ecologists have traditionally hypothesized a hierarchy of factors affecting the composition of ecological communities, with biotic interactions exerting a dominant influence at fine spatial scales, and abiotic factors such as climate driving patterns at broad spatial scales. However, the role of biotic interactions at macroecological scales has been increasingly questioned, with many ecologists hypothesizing that biotic interactions may have discernable effects on species distributions. Here, I evaluate the relative effects of climate and species interactions on composition patterns of tree species in the US Rocky Mountains. At fine spatial scales, …

An Analysis Of Environmentally-Persistent Free Radical Formation On Surrogate Soil Systems Containing Iron(Iii) And Copper(Ii) And The Potential Remediation Effects Of Laccases, Andrew Paul Mullet

Honors Capstones

No abstract provided.

Linking Trophic Interactions In Above- And Below-Ground Systems, Savannah Bennett

Theses, Dissertations and Culminating Projects

This study explored trophic interactions among herbivores, plants, and soil communities. Two experiments were conducted such that the below-ground effects of an above-ground herbivore, as well as the above-ground impacts of soil biota could be examined. The first project investigated the effects of gypsy moth (Lymantria dispar L.) herbivory on soil communities associated with oak trees (Quercus rubra L.). The goal of this study was to compare soil biota from defoliated oak trees with soil communities from undefoliated trees. The abundances of bacteria, bactivorous nematodes, and herbivorous nematodes were compared between a defoliated sampling site and an undefoliated site in …

A Novel Solution To Targeting Prosthetic Joint Infection, Christopher Chen

Theses, Dissertations and Culminating Projects

Prosthetic arthroplasty may be a life changing event for better or worse. The integrity of bone cartilages such as the lateral and medial meniscus found between the femur and tibia may degrade over time due to natural causes which may eventually result in bone on bone exposure causing excruciating pain. Prosthetics are used to replace the cartilage and bone damage using femoral and tibial component and a plastic spacer. A small percentage of all orthopedic replacement surgeries may lead to infections. These infections are caused by biofilm forming bacteria which allows bacteria to attach to abiotic surfaces and mature as …

Improving The Nutrient Content Of Agriculture Crops Through Community Ecology, Margo Malone

Renée Crown University Honors Thesis Projects - All

Agriculturists continually look for ways to improve the nutrient content of crops without decreasing yield or economic benefits. Mutualistic relationships have the potential to enhance the nutrient content without sacrificing the production needs of the farmer. Mutualisms occur when two or more species interact and both members of the association benefit. An exceedingly important and often overlooked mutualism is the one formed between arbuscular mycorrhizal fungi (AMF) and plants. This interaction has been shown to be a critical component of most ecosystems, yet our understanding of these relationships is still limited. We know that in exchange for photosynthetically derived carbon, …

The Effects Of Large Herbivores On Soil Organic Matter Quality In Terrestrial Ecosystems, Adrian Alvarez

Renée Crown University Honors Thesis Projects - All

Understanding the factors that control the natural fluxes of carbon into and out of terrestrial ecosystems is of paramount importance to forecast and adapt to climate change. Soil respiration – the release of carbon dioxide from roots and soil micro-organisms– is considered to be the largest terrestrial source of carbon dioxide. Microbial respiration, the least understood component of soil respiration, is to a great extent determined by soil organic matter quality, reflecting the relative fractions of labile and recalcitrant soil carbon. The goal of this research was to examine how herbivory affects soil organic matter quality across a wide range …

Lactate As A Memory-Enhancing Metabolite Across The Lifespan In Male Fischer 344 Rats, Brooke Hamling

Renée Crown University Honors Thesis Projects - All

Aging is often associated with cognitive decline, including problems with working memory and difficulties forming new memories. These deficits can be directly linked to the hippocampus, an area of the temporal lobe of the brain that is engaged during spatial working memory. Age-related declines may be influenced by changes in important modulatory pathways that impact hippocampal function, including regulation of the metabolite lactate. When astrocytic stores of glycogen are hydrolyzed, lactate is released into the extracellular space where it can be taken up by neurons and used as fuel during moments of activation. We previously found that the extracellular concentration …

Habitat Effects On Blood Adiponectin Isoforms In Black Bears., James-Dean Wood

College of Arts & Sciences Senior Theses

No abstract provided.

Selection Of Food Patches By Sympatric Herbivores In Response To Concealment And Distance From A Refuge, Miranda M. Crowell, Lisa A. Shipley, Meghan J. Camp, Janet L. Rachlow, Jennifer S. Forbey, Timothy R. Johnson

Biology Faculty Publications and Presentations

Small herbivores face risks of predation while foraging and are often forced to trade off food quality for safety. Life history, behaviour, and habitat of predator and prey can influence these trade-offs. We compared how two sympatric rabbits (pygmy rabbit, Brachylagus idahoensis; mountain cottontail, Sylvilagus nuttallii) that differ in size, use of burrows, and habitat specialization in the sagebrush-steppe of western North America respond to amount and orientation of concealment cover and proximity to burrow refuges when selecting food patches. We predicted that both rabbit species would prefer food patches that offered greater concealment and food patches that …

Physiology And Genetics Of Starvation-Selected Drosophila Melanogaster, Christopher Michael Hardy

UNLV Theses, Dissertations, Professional Papers, and Capstones

In nature, organisms have evolved to survive in stressful environments. This has driven organisms to adopt a wide range of unique adaptations. Investigating the mechanistic basis of these adaptations is an important tool for discovery that has led to major advances in science and medicine.

We study how organisms survive life without food, or starvational stress. Environmental stressors have shaped the quantity and quality of food sources across the globe. This has led to vast differences in the ability of some organisms to tolerate starvation over others. Many researchers have used Drosophila melanogaster as a model to study global patterns …

Phenotypic Characterization Of Adipose-Specific Vdr Knockout Mice, Joseph D'Angelo

Biological Sciences

Breast cancer is a prominent and lethal disease that currently affects close to three million people in the United States. Each year displays close to 250,000 new cases of breast cancer and around 40,000 deaths in the United States alone. A geographic pattern of breast cancer suggests a higher incidence in more temperate regions. Research has suggested that low Vitamin D levels associated with reduced sun exposure might contribute to increased breast cancer incidence. In recent studies, Vitamin D has been shown to slow the proliferation of breast cancer cells, but the mechanisms involved in vivo are poorly defined. It …

Design For Mosquito Abundance, Diversity, And Phenology Sampling Within The National Ecological Observatory Network, D. Hoekman, Y. P. Springer, C. M. Barker, R. Barrera, M. S. Blackmore, W. E. Bradshaw, D. H. Foley, H. S. Ginsberg, M. H. Hayden, C. M. Holzapfel, S. A. Juliano, L. D. Kramer, S. L. Ladeau, Todd P. Livdahl, C. G. Moore, R. S. Nasci, W. K. Reisen, H. M. Savage

Biology

The National Ecological Observatory Network (NEON) intends to monitor mosquito populations across its broad geographical range of sites because of their prevalence in food webs, sensitivity to abiotic factors, and relevance for human health. We describe the design of mosquito population sampling in the context of NEON's long-term continental scale monitoring program, emphasizing the sampling design schedule, priorities, and collection methods. Freely available NEON data and associated field and laboratory samples, will increase our understanding of how mosquito abundance, demography, diversity, and phenology are responding to land use and climate change.

Erratum: In the paper by Hoekman et al. (“Design …

A National Strategy For The Conservation Of Native Freshwater Mollusks, Megan Bradley, Robert S. Butler, Heidi L. Dunn, Catherine Gatenby, Patricia A. Morrison, Teresa J. Newton, Matthew Patterson, Kathryn E. Perez

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

In 1998, a strategy document outlining the most pressing issues facing the conservation of freshwater mussels was published (NNMCC 1998). Beginning in 2011, the Freshwater Mollusk Conservation Society began updating that strategy, including broadening the scope to include freshwater snails. Although both strategy documents contained 10 issues that were deemed priorities for mollusk conservation, the identity of these issues has changed. For example, some issues (e.g., controlling dreissenid mussels, technology to propagate and reintroduce mussels, techniques to translocate adult mussels) were identified in the 1998 strategy, but are less prominent in the revised strategy, due to changing priorities and progress …

Translating Ecology, Physiology, Biochemistry And Population Genetics Research To Meet The Challenge Of Tick And Tick-Borne Diseases In North America, Maria Dolores Esteve-Gassent, Ivan Castro-Arellano, Teresa Patricia Feria-Arroyo, Ramiro Patino, Andrew Y. Li, Raul F. Medina, Adalberto A. Pérez De León, Roger Iván Rodríguez-Vivas

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Emerging and re-emerging tick-borne diseases threaten public health and the wellbeing of domestic animals and wildlife globally. The adoption of an evolutionary ecology framework aimed to diminish the impact of tick-borne diseases needs to be part of strategies to protect human and animal populations. We present a review of current knowledge on the adaptation of ticks to their environment, and the impact that global change could have on their geographic distribution in North America. Environmental pressures will affect tick population genetics by selecting genotypes able to withstand new and changing environments and by altering the connectivity and isolation of several …

Effects Of Arachidin-1 And Arachidin-3 On Human Colon Cancer Cells, Jessica L. Bettis

Biological Sciences Undergraduate Honors Theses

Cancer remains a leading cause of death in the state of Arkansas and across the United States. Recent research found that peanuts consumption has been correlated with a decreased risk of cancer. Although limited research has been conducted, phenolic antioxidant compounds found in peanuts, arachidin-1 and arachidin-3, are correlated to a decrease in human leukemia and lung cancer cell growth. The objective of this study was to evaluate the anti-colon cancer effects of these compounds. Experiments were conducted to examine the effects of purified arachidin-1 and arachidin-3 on Caco-2 cell proliferation. Treatment of cells with arachidin-1 (0, 1, 5, 10µM) …

Relationships Between Texas Tortoise Carapace Length, Home Range Size, And Habitat Selection At Sites With Invasive Grass, Kiley V. Briggs

Theses and Dissertations

Invasive grasses in south Texas have the potential to negatively impact the threatened Texas tortoise (Gopherus berlandieri) by reducing the availability of preferred foods (forbs) and may cause tortoises to travel farther, lead to reduced carapace length, and reduce the availability of refugia from heat stress. I used compositional analysis, regression, and ANOVA to explore relationships between invasive grasses and habitat use, home range size, and carapace length, as well as compared daily maximum temperatures between tussocks of an invasive and native grass. Forbs were ranked higher in use over invasive grasses in compositional analysis, but not strongly so (p …

Jatropha Curcas Protoplast Isolation And Inhibitory Effects Of Culture, Christopher S. Lukaszewski

Theses and Dissertations

Improvement on the sub-tropical plant Jatropha curcas may increase the use of this drought tolerant oilseed crop for the production of biodiesel. One of the methods for enhancing a species is through genetic manipulation of the protoplast. Isolating protoplasts is challenging and culturing has many obstacles similar to those seen in tissue culture, such as oxidative browning. Successful isolation of J. curcas leaf protoplasts resulted in an average of 3.23 x 106 viable protoplasts/mL. However, protoplasts diminished within 2 days after culturing. A review of the potential solutions used for overcoming the inhibitory effects of culture may reveal further insight …

Friend Or Foe—Light Availability Determines The Relationship Between Mycorrhizal Fungi, Rhizobia And Lima Bean (Phaseolus Lunatus L.), Daniel J. Ballhorn, Martin Schädler, Jacob D. Elias, Jess A. Millar, Stefanie Kautz

Biology Faculty Publications and Presentations

Plant associations with root microbes represent some of the most important symbioses on earth. While often critically promoting plant fitness, nitrogen-fixing rhizobia and arbuscular mycorrhizal fungi (AMF) also demand significant carbohydrate allocation in exchange for key nutrients. Though plants may often compensate for carbon loss, constraints may arise under light limitation when plants cannot extensively increase photosynthesis. Under such conditions, costs for maintaining symbioses may outweigh benefits, turning mutualist microbes into parasites, resulting in reduced plant growth and reproduction. In natural systems plants commonly grow with different symbionts simultaneously which again may interact with each other. This might add complexity …

Ochratoxicosis In Monograstric Animals - A Review, Nafeesa Qudsia Hanif

Journal of Bioresource Management

Ochratoxin A (OTA) is a mycotoxin produced by several fungi of the genera Aspergillus and Penicillium, principally P. verrucosum in temperate climate and A. ochraceous in warm regions. In poultry feed materials, mycotoxins are found most commonly in cereals and to a lesser degree, in meals. The presence of OTA in animal feed contributes significantly to health disorders and decreased production. In addition to aflatoxins, which is an ubiquitously distributed toxin, OTA is one of the reasons for economic losses in the poultry industry due to poor performance and immunosuppression. Moreover, OTA has also been noted for the carryover …

In Vitro Propagation Of Morchella Esculenta And Study Of Its Life Cycle, Nazish Kanwal, Kainaat William, Kishwar Sultana

Journal of Bioresource Management

Among the edible mushrooms, Morchella esculenta (Pers.) is a highly prized mushroom which consists of a short stalk and a conical, pitted, hollow pileus. It is commonly known as a morel or sponge mushroom, or gucchi, etc. It belongs to the class Ascomycetes, order Pezizales and family Morchellaceae. It is found throughout the world. In Pakistan, it is found in northern areas from Murree, Patriata, and Gilgit under pine vegetation. It is therapeutic in nature; therefore its medicinal and biochemical properties are under investigation throughout the world, especially in regard to treating the hazardous diseases such as cancer, tumors, …

Rna Seq Analysis Of Non-Alcoholic Fatty Liver Disease (Nafld) Induced By Metabolic Syndrome In A Mouse Model, Diego Almanza

Honors College Theses

Metabolic syndrome is often defined by the presence of several factors, including accumulation of abdominal fat, high blood pressure and high blood glucose levels, that increases the risk of developing heart disease, diabetes and cancer. The development of metabolic syndrome has been shown to be very closely linked to lack of physical activity and is increasing concurrent with the rise of obesity rates among adults. Development of metabolic syndrome can have detrimental physiological effects throughout the body and can lead to the development of Non-Alcoholic Fatty Liver Disease (NAFLD). Proper liver function is crucial for the health of the body …

Stable Isotopes And The Ecology And Physiology Of Reptiles, Andrew M. Durso

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

When animals don’t have enough food, they have to “choose” between “spending” their limited energy on themselves or on their offspring. Biologists think that reptiles can make this choice quickly in response to different environments. But, it can be hard to study these choices because it is hard to convert between, for example, the number of eggs laid and the speed of healing a wound. By using stable isotope chemistry, we can collect more detailed and comparable information about how lizards and other animals spend their limited resources than with any other method. For example, lizards in the wild have …

Greater Sage-Grouse Vital Rate And Habitat Use Response To Landscape Scale Habitat Manipulations And Vegetation Micro-Sites In Northwestern Utah, Charles P. Sandford

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The greater sage-grouse (Centrocercus urophasianus; sage-grouse) has been a species of conservation concern since the early 20^th century. The decline of populations has largely been attributed to loss and degradation of sagebrush (Artemisia spp.) habitats. To contribute to the knowledge of sage-grouse ecology and quantify the effectiveness of landscape scale habitat manipulations intended to benefit sage-grouse, I monitored habitat use and vital-rates (i.e., nest and brood success) of 45 sage-grouse females in the Box Ender Sage-Grouse Management Area (SGMA) in northwestern Utah. Using telemetry locations of sage-grouse females with known nest and brood fates, I generated …

Anthropogenic And Natural Stressors And Their Effect On Immunity, Reproduction, And The Stress Response, Lorin A. Neuman-Lee

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Animals must be able to cope with many natural and human-made stressors in order to successfully survive and reproduce. These stressors can come in many forms and are increasing as human activities become more and more prevalent across the globe. In order to cope with these stressors, organisms must allocate limited energy away from processes such as reproduction to mount a stress response. This stress response involves the activation of the hypothalamic-pituitary-adrenal axis and results in a cascade of hormones and down-stream effects, such as changes in reproduction and immune function. In order to understand how reptiles and amphibians cope …

The Role Of Gpr84 In Medium-Chain Saturated Fatty Acid Taste Transduction, Yan Liu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The prevalence of overweight or obese in adults has nearly doubled during the past two decades, and obesity increases the risk of heart disease, diabetes, and even some types of cancer. One of the factors closely linked with the obesity epidemic is overconsumption of dietary fat. Accumulating evidence has supported the existence of the "taste of fat", and more and more studies have focused on identifying the mechanisms of fatty acid detection by gustatory system. In this study, I showed for the first time that medium-chain saturated fatty acids (MCFAs) were able to activate taste cells isolated from mice, and …