Integrative Biology Commons^™

Profiling Bat Activity And Species Presence In Managed Longleaf Pine Landscapes, Margaret Hunt

Master of Science in Integrative Biology Theses

Restoration of native flora or reintroduction of at-risk fauna includes management practices that while encouraging presence and proliferation of target species, may adversely affect non-focal species. An endemic ecosystem undergoing restoration within the southeastern U.S. is that of the longleaf pine (Pinus palustris). Bats inhabit key ecological niches in forest ecosystems, including the longleaf pine ecosystem, and can be indicators of ecosystem condition. This study investigated the effects of current forest management practices and landscape management history on bat species presence and activity levels within habitat undergoing longleaf pine restoration. We deployed bat detectors in two wildlife management …

A New Taxonomy Of Altruism In Terms Of Prosocial Behaviors, Kristin Kaiser

Dialogue & Nexus

The definition of altruism has been studied, explained, and even confused by many scholars in various fields. The term itself has been inappropriately used to describe prosocial behaviors that do not fall within the definition of altruism. An evaluation of Grant Ramsey’s taxonomy of altruism, which includes biological altruism, psychological altruism, and helping altruism, proves that it is not adequate in categorizing organism’s behaviors. A new taxonomy, with the branches of kin selection, reciprocity, and aesthetic altruism, is presented and explained to clarify the definition of altruism and alleviate confusion about how to describe prosocial behaviors. Both naming systems are …

African-American Esophageal Squamous Cell Carcinoma Expression Profile Reveals Dysregulation Of Stress Response And Detox Networks., Hayriye Verda Erkizan, Kory Johnson, Svetlana Ghimbovschi, Deepa Karkera, Gregory Trachiotis, Houtan Adib, Eric P Hoffman, Robert G Wadleigh

Genomics and Precision Medicine Faculty Publications

BACKGROUND: Esophageal carcinoma is the third most common gastrointestinal malignancy worldwide and is largely unresponsive to therapy. African-Americans have an increased risk for esophageal squamous cell carcinoma (ESCC), the subtype that shows marked variation in geographic frequency. The molecular architecture of African-American ESCC is still poorly understood. It is unclear why African-American ESCC is more aggressive and the survival rate in these patients is worse than those of other ethnic groups.

METHODS: To begin to define genetic alterations that occur in African-American ESCC we conducted microarray expression profiling in pairs of esophageal squamous cell tumors and matched control tissues.

RESULTS: …

Phenomenological And Molecular Basis Of The Cnidarian Immune System, Tanya Brown

FIU Electronic Theses and Dissertations

Coral reefs are one of the most diverse ecosystems on the planet due partially to the habitat structure provided by corals. Corals are long lived organisms that can live for hundreds of years and as a result growth of many species is very slow. As a result of this, recovery of corals from disease outbreaks is very slow and difficult and therefore the ecosystem is deteriorating rapidly. Due to this increase in disease and its detrimental effect on coral reefs, it has become imperative to study how corals respond to disease outbreaks. The response of the coral to pathogens is …

Peromyscus Boylii And Peromysus Californicus Differ In Physical Characteristic Measurements, Puja M. Kasondra

Biological Sciences

I provide a comparison of physical characteristics between Peromyscus boylii and Peromyscus californicus. All mice compared were captured in the dominant regions of the Los Padres National Forest during three different years – 2005, 2011, and 2014. The dominant regions of the Los Padres National Forest include Riparian, Woodlands, and Chaparral. All characteristics, ear (from notch), head and body, hind foot, tail, and weights, were compared between males of each species and then between females of each species. All data were analyzed in JMP 12. Out of all the characteristics, tail and weight had the greatest difference between the …

The Population Genetics Of Morro Bay Eelgrass (Zostera Marina), Julia Gardner Harencar

Master's Theses

Seagrass populations are in decline worldwide. Zostera marina (eelgrass), one of California’s native seagrasses, is no exception to this trend. In the last 8 years, Morro Bay, California has lost 95% of its eelgrass. Eelgrass is an ecosystem engineer, providing important ecosystem services such as sediment stabilization, nutrient cycling, and nursery habitats for fish. The failure of recent restoration efforts necessitates a better understanding of the causes of eelgrass decline in this estuary. Previous research on eelgrass in California has demonstrated a link between population genetic diversity and eelgrass bed health, ecosystem functioning, and resilience to disturbance and extreme climatic …

Investigation Into The Mechanism Of Ion Transport In Rio Negro Characiformes, Vineza D. Reduta

Undergraduate Honors Theses

Four fish species within the Characiform Order [(Rosy tetras (Hyphessobrycon rosaceus), Serpae tetras (Hyphessobrycon eques), Emperor tetras (Nematobrycon palmeri) and Penguin tetras (Thayeria obliqua)] are native to the ion-poor, acidic waters of the Rio Negro. In this paper, we focus on Wood’s revised Na⁺/NH₄⁺ exchange model to gain better insight into the mechanisms of ion transport within the Characids. We exposed each species to two experimental treatments: (i) 1mM ammonia (high external ammonia [HEA]), to test coupling of Na⁺ uptake and ammonia excretion, and (ii) 100μM Acetazolamide …

Improving Reproducibility Of Phenotypic Assessments In The Dyw Mouse Model Of Laminin-Α2 Related Congenital Muscular Dystrophy., Raffaella Willmann, Heather Gordish-Dressman, Sarina Meinen, Markus A Rüegg, Qing Yu, Kanneboyina Nagaraju, +Several Additional Authors

Genomics and Precision Medicine Faculty Publications

Laminin-α2 related Congenital Muscular Dystrophy (LAMA2-CMD) is a progressive muscle disease caused by partial or complete deficiency of laminin-211, a skeletal muscle extracellular matrix protein. In the last decade, basic science research has queried underlying disease mechanisms in existing LAMA2-CMD murine models and identified possible clinical targets and pharmacological interventions. Experimental rigor in preclinical studies is critical to efficiently and accurately quantify both negative and positive results, degree of efficiency of potential therapeutics and determine whether to move a compound forward for additional preclinical testing. In this review, we compare published available data measured to assess three common parameters in …

Divergent Responses Of Larval And Juvenile Blue Mussels To Low Salinity Exposure, Melissa A. May

Electronic Theses and Dissertations

In this study, we compared the osmotic stress response of larval and juvenile blue mussels (Mytilus edulis) at the transcriptomic, metabolomic, and whole organism levels. Blue mussels inhabit coastal areas, where they face climate-induced reductions in nearshore salinity. Despite their ecological and economic importance, scientists do not fully understand the underlying transcriptomic and cellular mechanisms of the osmotic stress response in blue mussels or how the ability to respond to stress changes throughout development. Blue mussels spend the first weeks of life developing through several larval stages in the plankton. These early life history stages are more vulnerable …

Measuring Fertilization In Populations Of Sea Scallop (Placopecten Magellanicus): Developing And Testing Methods In The Laboratory And Field, Skylar Bayer

Electronic Theses and Dissertations

Most marine organisms are broadcast spawners, releasing their sperm and eggs into the water column. Methods of measuring in situ fertilization have proven successful with a few model species, which are reviewed in my introductory chapter. However, many commercially exploited species, such as the sea scallop Placopecten magellanicus, have been neglected. Sea scallop populations have greatly increased from fishing closures, but the mechanism behind this response is uncertain, particularly in regard to fertilization. In this dissertation I developed a methodology of measuring fertilization success and spawning events of P. magellanicus, tested it in laboratory and field settings, and …

Bacterial Diversity At An Abandoned Coal Mine In Southeast Kansas, Rachel Bechtold

Electronic Theses & Dissertations

Bacterial Diversity at an Abandoned Coal Mine in

Southeast Kansas

An Abstract of the Thesis by

Rachel Bechtold

Acid mine drainage (AMD) is found in areas of abandoned coal mines in southeast Kansas as a result of mine waste rocks and tailings create problems for the local environment. Soil bacterial population acts as a reliable indicator of ecosystem health in these human-perturbed areas. The goals of the present study were to assess the bacterial diversity of an AMD site over a two-year period and to isolate acid-tolerant bacterial species for bioremediation purpose.

In fall (2015) and summer (2016), soil samples …

Searching For Sex Differences In Snake Skin, Sydney E. Ashton

Senior Honors Projects, 2010-2019

The production of many secondary sexual signals, including pheromones, is controlled by sex hormone action at the sites of signal synthesis. The red-garter snake (Thamnophis sirtalis parietalis) is an ideal vertebrate for studying the interaction between steroids and sexual signals: males exclusively rely on skin-based female pheromones during courtship, and pheromone composition is augmented by treatment with sex steroids (e.g., males produce female pheromone if implanted with estrogen). But how do steroid hormones promote pheromone expression at the molecular level in snake skin? Feminizing effects of estrogens on sexual signals are known to result from activation of estrogen …

Chromatin-Modifying Agents Convert Fibroblasts To Oct4+ And Vegfr-2+ Capillary Tube-Forming Cells, Anita Wary, Neil Wary '18, Jugajyoti Baruah, Victoria Mastej, Kishore K. Wary

Student Publications & Research

Rationale
The human epigenome is plastic. The goal of this study was to address if fibroblast cells can be epigenetically modified to promote neovessel formation.

Methods and results
Here, we used highly abundant human adult dermal fibroblast cells (hADFCs) that were treated with the chromatin-modifying agents 5-aza-2'-deoxycytidine and trichostatin A, and subsequently subjected to differentiation by activating Wnt signaling. Our results show that these epigenetically modified hADFCs increasingly expressed β-catenin, pluripotency factor octamer-binding transcription factor-4 (OCT4, also known as POU5F1), and endothelial cell (EC) marker called vascular endothelial growth factor receptor-2 (VEGFR-2, also known as Fetal Liver Kinase-1). In microscopic …

Using Phylogenetic Comparative Methods To Understand Diversification And Geographic Range Evolution, Kathryn Aurora Massana

Doctoral Dissertations

Two key processes that have been modeled in a phylogenetic comparative framework are diversification and historical biogeography. Many questions arise on what process have shaped the abundance (or lack) of species we see today and what influences their survival and interconnectedness with other species. Many methods have been developed to answer these questions. Over the past several decades there has been a rise in parametric modeling and development of more adequate frameworks to answer biological questions of interest. However, many models still lack the incorporation of ecological, mainly biotic factors, which influence the evolution and ecology of species, while accounting …

Vegetative Rapid Assessment And Habitat Quality Analysis Of Steidtmann Woods, Sarah Mae Bail

Honors Projects

Due to invasive species and the assumption of an unhealthy ecosystem, Steidtmann Woods is an underutilized piece of land owned by Bowling Green State University. However, the property had never been analyzed. The proposed hypothesis was that Steidtmann was indeed in destress and its ecosystem could benefit from intervention—removal of invasive species and supplementation of natives. Through a rapid vegetative analysis, data was collected in several regions of the woods to identify what navies and non-natives were present as well as to identify their proportions. With that data, the species evenness, richness, and diversity was calculated; first, with raw field …

Daphnia Magna As A Model To Study The Obesogenic Effects Of Environmental Pollutants: Development Of Assays To Assess Changes In Lipid Production, Allison Georgescu, Roberta Attanasio, Asia Bright

Georgia State Undergraduate Research Conference

No abstract provided.

Cichlid Behavioral Ecology: Streams Of Costa Rica, Ali Saheb, Erfan Ranjbar, Shannon Dieffenderfer, Yazmeen Almutairri, Nicole Williams-Ugula, Ella Brook Gray, Adel Pereira

Georgia State Undergraduate Research Conference

No abstract provided.

Where The Wild Things Are: Investigating Body Size As A Mechanism For Persistence, Meghan A. Balk

Biology ETDs

Body size is a trait under selection. Genetic drift, climate, diet quality, and biotic interactions all select upon body size at the population, species, and community levels. These factors can be important in the context of rapidly changing climate. One of the ways an animal can persist in its environment is through morphological adaptation in situ. Here, I investigate four questions relating to the evolution of body size: (1) what is the limit in body size change in response to climatic change; (2) how does body size influence the thermal tolerances of animals; (3) how does body size evolve …

Trap-Neuter-Return Programs And The Importance Of Associated Public Awareness, Nicolette Sliwa

Biology: Student Scholarship & Creative Works

The focus of this paper is to describe a typical Trap-Neuter-Return (TNR) program and highlight the major pros and cons surrounding this somewhat controversial method of managing the overwhelming free-roaming cat population. The effects of the species’ overabundance on the environment and human health are also discussed. Citing studies completed on TNR programs around the globe as well as mathematical models, the effectiveness of this method is compared to other, currently used alternatives. Finally, it has been suggested that the general awareness level a neighborhood possesses about the true goals of TNR programs has a potentially significant impact on the …

Costs Of Reproduction And Carry-Over Effects In Breeding Albatrosses, Glenn T. Crossin, Richard A. Phillips, Christine R. Lattin, L. Michael Romero, Xavier Bordeleau, Christopher M. Harris, Oliver P. Love, Tony D. Williams

Integrative Biology Publications

We investigated the physiology of two closely related albatross species relative to their breeding strategy: black-browed albatrosses (Thalassarche melanophris) breed annually, while grey-headed albatrosses (T. chrysostoma) breed biennially. From observations of breeding fate and blood samples collected at the end of breeding in one season and feather corticosterone levels (fCort) sampled at the beginning of the next breeding season, we found that in both species some post-breeding physiological parameters differed according to breeding outcome (successful, failed, deferred). Correlations between post-breeding physiology and fCort, and links to future breeding decisions, were examined. In black-browed albatrosses, post-breeding physiology and fCort were not …