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Biological and Chemical Physics Commons™
Open Access. Powered by Scholars. Published by Universities.®
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- Informacje dla studentów (in Polish) (18)
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- Wojciech Budzianowski (29)
- Faculty Scholarship (6)
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Articles 1 - 30 of 50
Full-Text Articles in Biological and Chemical Physics
Optimization Of Flagellar Locomotion In The Low Reynolds Number Regime, Aidan M. Trodden, Aidan M. Trodden
Optimization Of Flagellar Locomotion In The Low Reynolds Number Regime, Aidan M. Trodden, Aidan M. Trodden
Physics
This report investigates the computational and theoretical techniques - modeled by E. Lauga and C. Eloy - used to optimize the shape of an activated flagellum for enhanced cell motility. Cell motility is ubiquitous and has a large affect on biological systems such as marine life ecosystems, reproduction, and infection. The physical principles governing flagellar propulsion are explored using computational fluid dynamics simulations, mathematical modeling, and the sequential quadratic programming (SQP) optimization algorithm. Through iterative refinement, we can identify optimized flagellar shapes that would minimize the energetic cost dependent on a single dimensionless sperm numbers (Sp). The computation of the …
Long-Range And Chaotic Active Mixing Of Swimming Microbes In A Vortex Chain Flow, Nghia Le
Long-Range And Chaotic Active Mixing Of Swimming Microbes In A Vortex Chain Flow, Nghia Le
Honors Theses
We present experiments studying the motion and active mixing of swimming mi- crobes in laminar, vortex-dominated fluid flows. We are testing a theory that predicts the existence of swimming invariant manifolds (SwIMs) - invisible, one-way barriers blocking the paths of self-propelled tracers in the flow in one direction. We also pro- pose that the SwIMs together can form chute structures in three-dimensional phase space that facilitate cross-vortex transport of the microbes. We also observe evidence of how these structures promote long-range transport at different non-dimensional velocities (microbe’s velocity relative to flow velocity). Long-range transport is quan- tified by measuring the …
Fabrication And Investigation Of Microfluidic Devices That Produce Non-Linear Chemical Gradients, Elijah L. Waters
Fabrication And Investigation Of Microfluidic Devices That Produce Non-Linear Chemical Gradients, Elijah L. Waters
Electronic Theses and Dissertations
Investigation of cell chemotaxis requires controlled chemical gradients. We investigated microfluidic devices that could enhance small populations' cell assays because of their ability to generate various chemical gradients. Our five designs generate different chemical concentration landscapes that we can easily convert into tools to study cell response to growth factors. Gradient landscapes occurred by splitting and mixing two input fluid concentrations using bifurcations, trifurcations, and Y-mixing junctions in three consecutive steps. Such fluid flow manipulations resulted in nine concentration streams entering a 0.54-mm-wide gradient chamber. The first design used a 1:1 ratio Y-mixer (unbiased) when blending two concentrations, resulting in …
Frozen In Time: A Numerical Modeling Approach To The Study Of Ice Bearing Planetesimals Through Carbonaceous Chondrites, Jasmine M. Bayron
Frozen In Time: A Numerical Modeling Approach To The Study Of Ice Bearing Planetesimals Through Carbonaceous Chondrites, Jasmine M. Bayron
Dissertations, Theses, and Capstone Projects
Icy planetesimals are significant objects of study for meteoritics, planetary science, and astrobiology due to their connections to the origins of life and liquid water on Earth. An existing closed system aqueous alteration model was adapted to simulate several scenarios involving early Solar System geologic processes occurring in an icy planetesimal interior. The model described in this work has been developed not only to test the validity of constraints currently thought to apply to CM1 parent bodies, but to directly compare the implications of these constraints for the isotopic composition and the modal mineralogy of carbonaceous chondrites. Isotopic ratios of …
Numerical Simulations Of Capsule Deformation Using A Dual Time-Stepping Lattice Boltzmann Method, Charles Armstrong, Yan Peng
Numerical Simulations Of Capsule Deformation Using A Dual Time-Stepping Lattice Boltzmann Method, Charles Armstrong, Yan Peng
Mathematics & Statistics Faculty Publications
In this work a quasisteady, dual time-stepping lattice Boltzmann method is proposed for simulation of capsule deformation. At each time step the steady-state lattice Boltzmann equation is solved using the full approximation storage multigrid scheme for nonlinear equations. The capsule membrane is modeled as an infinitely thin shell suspended in an ambient fluid domain with the fluid structure interaction computed using the immersed boundary method. A finite element method is used to compute the elastic forces exerted by the capsule membrane. Results for a wide range of parameters and initial configurations are presented. The proposed method is found to reduce …
Development Of A Comsol Microdialysis Model, Towards Creation Of Microdialysis On A Chip With Improved Geometries And Recovery, Patrick Pysz
Development Of A Comsol Microdialysis Model, Towards Creation Of Microdialysis On A Chip With Improved Geometries And Recovery, Patrick Pysz
Graduate Theses and Dissertations
Microdialysis (µD) sampling is a diffusion-limited sampling method that has been widely used in different biomedical fields for greater than 35 years. Device calibration for in vivo studies is difficult for current non-steady state analytes of interest correlated with both inflammatory response and microbial signaling molecules (QS); which exist in low ng/mL to pg/mL with molecular weights over a wide range of 170 Da to 70 kDa. The primary performance metric, relative recovery (RR), relating the collected sample to the extracellular space concentration varies from 10% to 60% per analyte even under controlled bench-top conditions. Innovations in microdialysis device design …
Quantification Of Contrast-Enhanced Ultrasound, Joseph Pathoulas
Quantification Of Contrast-Enhanced Ultrasound, Joseph Pathoulas
All College Thesis Program, 2016-2019
The aim of this experiment was to investigate the effect of manipulating ultrasound scanner settings on time-intensity curve parameters in a tube perfusion phantom system using contrast-enhanced ultrasound imaging. Imaging was performed using a Philips LOGIQ E9 ultrasound scanner equipped with a C1-6VN transducer and utilized two different microbubble contrast agents: Definity and Lumason. The ultrasound scanner settings manipulated included: gain, dynamic range, and frequency. Additionally, relative microbubble concentration, microbubble type, and perfusion flow rate were manipulated. Four time-intensity curve parameters (time to peak, area under curve, gradient, peak intensity) were measured from linearized pixel data. Time to peak was …
Call For Abstracts - Resrb 2019, July 8-9, Wrocław, Poland, Wojciech M. Budzianowski
Call For Abstracts - Resrb 2019, July 8-9, Wrocław, Poland, Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Comparison Between The Water Activation Effects By Pulsed And Sinusoidal Helium Plasma Jets, Han Xu, Dingxin Liu, Wenjie Xia, Chen Chen, Weitao Wang, Zhijie Liu, Xiaohua Wang, Michael G. Kong
Comparison Between The Water Activation Effects By Pulsed And Sinusoidal Helium Plasma Jets, Han Xu, Dingxin Liu, Wenjie Xia, Chen Chen, Weitao Wang, Zhijie Liu, Xiaohua Wang, Michael G. Kong
Bioelectrics Publications
Comparisons between pulsed and sinusoidal plasma jets have been extensively reported for the discharge characteristics and gaseous reactive species, but rarely for the aqueous reactive species in water solutions treated by the two types of plasma jets. This motivates us to compare the concentrations of aqueous reactive species induced by a pulsed and a sinusoidal plasma jet, since it is widely reported that these aqueous reactive species play a crucial role in various plasma biomedical applications. Experimental results show that the aqueous H2O2, OH/O2−, and O2−/ONOO− induced by the …
Removal Of Chlorine From Chlorine-Nitrogen Mixture In A Film Of Liquid Water, Sarwan S. Sandhu
Removal Of Chlorine From Chlorine-Nitrogen Mixture In A Film Of Liquid Water, Sarwan S. Sandhu
Sarwan S. Sandhu
In industry there are many examples of absorption of a gas with or without chemical reaction in the liquid phase. In physical absorption, a particular gaseous component is removed from a gas mixture due to its larger solubility in the liquid phase solvent. The removal of butane and pentane from a refinery gas mixture by a heavy oil in the liquid phase is an example of physical absorption. In absorption with chemical reaction, the gaseous component to be removed transfers across the gas-liquid interface due to a difference in the bulk chemical potentials or concentrations in the two phases. The …
C.V. - Wojciech Budzianowski, Wojciech M. Budzianowski
Renewable Energy And Sustainable Development (Resd) Group, Wojciech M. Budzianowski
Renewable Energy And Sustainable Development (Resd) Group, Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Procesy Cieplne I Aparaty (Lab), Wojciech M. Budzianowski
Inżynieria Chemiczna Lab., Wojciech M. Budzianowski
Distributions Of Long-Lived Radioactive Nuclei Provided By Star-Forming Environments, Marco Fatuzzo, Fred Adams
Distributions Of Long-Lived Radioactive Nuclei Provided By Star-Forming Environments, Marco Fatuzzo, Fred Adams
Faculty Scholarship
Radioactive nuclei play an important role in planetary evolution by providing an internal heat source, which affects planetary structure and helps facilitate plate tectonics. A minimum level of nuclear activity is thought to be necessary—but not sufficient—for planets to be habitable. Extending previous work that focused on short-lived nuclei, this paper considers the delivery of long-lived radioactive nuclei to circumstellar disks in star forming regions. Although the long-lived nuclear species are always present, their abundances can be enhanced through multiple mechanisms. Most stars form in embedded cluster environments, so that disks can be enriched directly by intercepting ejecta from supernovae …
Advantages Of A Finite Extensible Nonlinear Elastic Potential In Lattice Boltzmann Simulations, Tai-Hsien Wu, Dewei Qi
Advantages Of A Finite Extensible Nonlinear Elastic Potential In Lattice Boltzmann Simulations, Tai-Hsien Wu, Dewei Qi
The Hilltop Review
A new structure, generalized lattice nonlinear spring model (GLNSM), which adopts non-linear FENE-LJ potential instead of harmonic potential, has been coupled with lattice Boltzmann simulation for solving fluid-solid interaction problem. In this article, a significant work is the relationship between the GLNSM (FENE-LJ potential) and Young’s modulus has been described in detail. A validation has also been presented to prove that GLNSM is reliable.
Charged Particle Dynamics In The Magnetic Field Of A Long Straight Current-Carrying Wire, M. Fatuzzo, A. Prentice, T. Toepker
Charged Particle Dynamics In The Magnetic Field Of A Long Straight Current-Carrying Wire, M. Fatuzzo, A. Prentice, T. Toepker
Faculty Scholarship
The article discusses the concept behind motion of a charged particle in a non-uniform filed of a wire carrying current. Topics discussed include possible types of motion in a current carrying field, vector analysis of velocity and magnetic field of the particle and Coupled differential equations.
Inżynieria Chemiczna Ćw., Wojciech M. Budzianowski
Tematyka Prac Doktorskich, Wojciech M. Budzianowski
Tematyka Prac Doktorskich, Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Zespół Energii Odnawialnej I Zrównoważonego Rozwoju (Eozr), Wojciech M. Budzianowski
Zespół Energii Odnawialnej I Zrównoważonego Rozwoju (Eozr), Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
A Numerical Assessment Of Cosmic-Ray Energy Diffusion Through Turbulent Media, M. Fatuzzo, F. Melia
A Numerical Assessment Of Cosmic-Ray Energy Diffusion Through Turbulent Media, M. Fatuzzo, F. Melia
Faculty Scholarship
No abstract provided.
Effects Of Turbulence On Cosmic Ray Propagation In Protostars And Young Stars, M. Fatuzzo, F. C. Adams
Effects Of Turbulence On Cosmic Ray Propagation In Protostars And Young Stars, M. Fatuzzo, F. C. Adams
Faculty Scholarship
No abstract provided.
Termodynamika Procesowa I Techniczna Lab., Wojciech M. Budzianowski
Termodynamika Procesowa I Techniczna Lab., Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Tematyka Prac Dyplomowych Dla Studentów Wydziału Mechaniczno-Energetycznego Pwr., Wojciech M. Budzianowski
Tematyka Prac Dyplomowych Dla Studentów Wydziału Mechaniczno-Energetycznego Pwr., Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Tematyka Prac Dyplomowych Dla Studentów Wydziału Chemicznego Pwr., Wojciech M. Budzianowski
Tematyka Prac Dyplomowych Dla Studentów Wydziału Chemicznego Pwr., Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Mechanika Płynów Lab., Wojciech M. Budzianowski
Mechanika Płynów Lab., Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Microfluidic Electrical Sorting Of Particles Based On Shape In A Spiral Microchannel, John Dubose, Xinyu Lu, Saurin Patel, Shizhi Qian, Sang Woo Joo
Microfluidic Electrical Sorting Of Particles Based On Shape In A Spiral Microchannel, John Dubose, Xinyu Lu, Saurin Patel, Shizhi Qian, Sang Woo Joo
Mechanical & Aerospace Engineering Faculty Publications
Shape is an intrinsic marker of cell cycle, an important factor for identifying a bioparticle, and also a useful indicator of cell state for disease diagnostics. Therefore, shape can be a specific marker in label-free particle and cell separation for various chemical and biological applications. We demonstrate in this work a continuous-flow electrical sorting of spherical and peanut-shaped particles of similar volumes in an asymmetric double-spiral microchannel. It exploits curvature-induced dielectrophoresis to focus particles to a tight stream in the first spiral without any sheath flow and subsequently displace them to shape-dependent flow paths in the second spiral without any …
An Unexpected Particle Oscillation For Electrophoresis In Viscoelastic Fluids Through A Microchannel Constriction, Xinyu Lu, Saurin Patel, Meng Zhang, Sang Woo Joo, Shizhi Qian, Amod Ogale, Xiangchun Xuan
An Unexpected Particle Oscillation For Electrophoresis In Viscoelastic Fluids Through A Microchannel Constriction, Xinyu Lu, Saurin Patel, Meng Zhang, Sang Woo Joo, Shizhi Qian, Amod Ogale, Xiangchun Xuan
Mechanical & Aerospace Engineering Faculty Publications
Electrophoresis plays an important role in many applications, which, however, has so far been extensively studied in Newtonian fluids only. This work presents the first experimental investigation of particle electrophoresis in viscoelastic polyethylene oxide (PEO) solutions through a microchannel constriction under pure DC electric fields. An oscillatory particle motion is observed in the constriction region, which is distinctly different from the particle behavior in a polymer-free Newtonian fluid. This stream-wise particle oscillation continues until a sufficient number of particles form a chain to pass through the constriction completely. It is speculated that such an unexpected particle oscillating phenomenon is a …
Mechaniczny Rozdział Faz Proj., Wojciech M. Budzianowski
Mechaniczny Rozdział Faz Proj., Wojciech M. Budzianowski
Wojciech Budzianowski
No abstract provided.
Challenges And Prospects Of Processes Utilising Carbonic Anhydrase For Co2 Separation, Patrycja Szeligiewicz, Wojciech M. Budzianowski
Challenges And Prospects Of Processes Utilising Carbonic Anhydrase For Co2 Separation, Patrycja Szeligiewicz, Wojciech M. Budzianowski
Wojciech Budzianowski
This article provides an analysis of processes for separation CO2 by using carbonic anhydrase enzyme with particular emphasis on reactive-membrane solutions. Three available processes are characterised. Main challenges and prospects are given. It is found that in view of numerous challenges practical applications of these processes will be difficult in near future. Further research is therefore needed for improving existing processes through finding methods for eliminating their main drawbacks such as short lifetime of carbonic anhydrase or low resistance of reactive membrane systems to impurities contained in flue gases from power plants.