Other Oceanography and Atmospheric Sciences and Meteorology Commons^™

A Gap Analysis Of Meteorological Requirements For Commercial Space Operators, Nicholas Stapleton

Doctoral Dissertations and Master's Theses

Commercial space companies will soon be the primary method of launching people and supplies into orbit. Among the critical aspects of space launches are the meteorological concerns. Laws and regulations pertaining to meteorological considerations have been created to ensure the safety of the space industry and those living around spaceports; but, are they adequate? Perhaps the commercial space industry can turn to the commercial aviation industry to help answer that question. Throughout its history, the aviation industry has dealt with lessons learned from mishaps due to failures in understanding the significance of weather impacts on operations. Using lessons from the …

Short Period Gravity Waves In The Arctic Atmosphere Over Alaska, Michael Negale, Kim Nielsen, Michael J. Taylor, Britta Irving, Richard Collins

Physics Student Research

The propagation nature and sources of short-period gravity waves have been studied extensively at low and mid-latitudes, while their extent and nature at the polar regions are less known. During the last decade, observations from select sites on the Antarctic continent have revealed a significant presence of these waves over the southern Polar Region as well as shown unexpected dynamical behavior. In contrast, observations over the Arctic region are few and the dynamical behavior is unknown. A recent project was initiated in January 2011 to investigate the presence and dynamics of these waves over interior Alaska. This site provides an …

Nantucket Shellfish Management Plan, Matthew Herr, Frank Dutra, Tara Riley, Sarah Oktay, Peter Boyce, Doug Smith, Carl Sjolund, Jake Kritzer, Cormac Collier, Dave Fronzuto, Kristin Uiterwyk, Jack Wiggin, Dale Leavitt, Steve Bliven, Allison Novelly, Dan Hellin

Urban Harbors Institute Publications

Nantucket’s shellfisheries are significant both locally and nationally. Locally, commercial and recreational shellfishing are critical to the Island’s history, culture, and economy. Nationally, the Island’s largest commercial shellfishery — the Nantucket bay scallop fishery is one of the last wild-harvest bay scallop fisheries in the country, but there is growing concern over the health of the overall population and the sustainability of the fishery. Given the importance of the shellfisheries on Nantucket and the drastic decline of bay scallop populations elsewhere along the Atlantic coast, there is a compelling interest in ensuring that the Town’s shellfish are managed to sustain …

Sediment Transport And Distribution Over Continental Shelves: A Glimpse At Two Different River-Influenced Systems, The Cariaco Basin And The Amazon Shelf., Laura Lorenzoni

USF Tampa Graduate Theses and Dissertations

The aim of this dissertation was to understand lithogenic suspended sediment transport mechanisms and distribution in two river-influenced margins: The Cariaco Basin, Venezuela, and the Amazon Shelf, Brazil. Lithogenic sediment input in the Cariaco Basin is controlled by small mountainous rivers (SMR), while in the Amazon Shelf it is dominated by the Amazon River, the largest river in the world in terms of freshwater discharge (~20% of global riverine discharge). Optical transmissometer measurements were coupled with particulate organic matter (POM) observations to understand changes in the geochemical composition of suspended sediment and spatial/temporal distributions over the two regions of interest. …

Production Of Bioactive Secondary Metabolites By Florida Harmful Bloom Dinoflagellates Karenia Brevis And Pyrodinium Bahamense, Cheska Burleson

USF Tampa Graduate Theses and Dissertations

Despite the critical role algae serve as primary producers, increases or accumulation of certain algae may result in Harmful Algal Blooms (HABs). Algal toxins from these blooms contribute significantly to incidences of food borne illness, and evidence suggests HABs are expanding in frequency and distribution. Mitigation of these HABs without knowledge of the ecological purpose and biochemical regulation of their toxins is highly unlikely. The production, function, and potential of secondary metabolites produced by the dinoflagellates Karenia brevis and Pyrodinium bahamense, were investigated.

Brevetoxins were demonstrated by two different methods to localize within the cytosol of Karenia brevis. …

A Study Of The Eastern Oyster, Crassostrea Virginica, In Tampa Bay: Effects Of Perkinsus Marinus On Reproduction And Condition, Bridgit Melora Mccrickard

USF Tampa Graduate Theses and Dissertations

Abstract

Five sites in Tampa Bay, Florida, were sampled monthly from February 2006 to January 2007. These sites were located at the mouth of the Alafia River, in an inlet of Cross Bayou, on the easement of Gandy Bridge, near mangrove in Manatee County, and an inlet of Salt Creek, off Bayboro Harbor. Standard methods were used to determine shell height and Condition Index (CI). Intensity and prevalence of Perkinsus marinus were analyzed using Ray's Thioglycollate medium test, while Haplosporidium nelsoni was studied by histological examination. Histological methods were also used to determine sex ratios, reproductive phases, and egg diameters. …

The International Bathymetric Chart Of The Arctic Ocean (Ibcao) Version 3.0, Martin Jakobsson, Larry A. Mayer, Bernard Coakley, Julian A. Dowdeswell, Steve Forbes, Boris Fridman, Hanne Hodnesdal, Riko Noormets, Richard Pedersen, Michele Rebesco, Hans Werner Schenke, Yulia Zarayskaya, Daniela Accettella, Andy Armstrong, Robert M. Anderson, Paul Beinhoff, Angelo Camerlenghi, Ian Church, Margo Edwards, James V. Gardner, John K. Hall, Benjamin Hell, Ole Hestvik, Yngve Krisoffersen, Christian Marcussen, Rezwen Mohammad, David Mosher, Son V. Nghiem, Maria Teresa Pedrosa, Paola G. Travaglini, Pauline Weatherall

Center for Coastal and Ocean Mapping

[1] The International Bathymetric Chart of the Arctic Ocean (IBCAO) released its first gridded bathymetric compilation in 1999. The IBCAO bathymetric portrayals have since supported a wide range of Arctic science activities, for example, by providing constraint for ocean circulation models and the means to define and formulate hypotheses about the geologic origin of Arctic undersea features. IBCAO Version 3.0 represents the largest improvement since 1999 taking advantage of new data sets collected by the circum-Arctic nations, opportunistic data collected from fishing vessels, data acquired from US Navy submarines and from research ships of various nations. Built using an improved …

Long-Term Changes To The Frost-Free Season As A Function Of Climatic Continentality, Ian Blaylock

Mahurin Honors College Capstone Experience/Thesis Projects

The beginning, end, and length of the annual frost-free season vary considerably both spatially and temporally. The continentality of the climate of a given area has a close connection with the magnitude and nature of these variations. Long term changes in the frost-free season can be divided into three distinct phases: a lengthening of the frost-free season in the early 20^th century, a shortening in the mid-20^th century, and a renewed, intensified lengthening from 1970 to today. While oceanic and ultraoceanic climates experience decreased incidence of frosts relative to their continental counterparts, analysis has shown that overall 20 …

Florida Fishery-Wide Reproductive Indices Of Stone Crab, Menippe Mercenaria, And Their Application To Stock Assessment And Management, Claire Elizabeth Crowley

USF Tampa Graduate Theses and Dissertations

The stone crab, Menippe mercenaria, supported the third most valuable fishery in Florida in 2016. Declining catch per unit effort (CPUE) and overall negative trend in landings since 2000 have raised concerns among fisherman, researchers, and fishery managers about the resiliency of the fishery. The Florida Fish and Wildlife Research Institute estimated that the Florida stone crab fishery has been overexploited since 1997. Overexploited fisheries, such as the commercial stone crab fishery, risk induced changes in life history parameters, such as age at maturation and reproductive output. In turn, these population-level changes have the potential to reduce the spawning …

The Impacts Of Population Density, And State & National Litter Prevention Programs On Marine Debris, Melissa Rose Brogle

USF Tampa Graduate Theses and Dissertations

Marine debris is improperly disposed of solid waste, also called litter, which is deposited in the marine environment (NOAA, 2010). Litter prevention techniques such as fines, cleanups, incentives, and others, can help to decrease litter, and ultimately decrease marine debris. This research analyzed 2000 and 2010 International Coastal Cleanup (ICC) data obtained from The Ocean Conservancy to ascertain whether certain litter prevention techniques did reduce amounts and types of marine debris found in coastal areas. The litter prevention techniques analyzed included state bottle bills, voluntary monofilament fishing line recycling programs, and the Keep America Beautiful (KAB) cigarette butt litter prevention …

Evidence For Viral Infection In The Copepods Labidocera Aestiva And Acartia Tonsa In Tampa Bay, Florida, Darren Stephenson Dunlap

USF Tampa Graduate Theses and Dissertations

Mesozooplankton are of critical importance to marine food webs by transferring energy from the microbial food web to higher trophic levels and depositing energy to the deeper ocean layers through fecal deposition. While decades of research have shown that viruses have significant impacts in the oceans, and infect a wide range of organisms from bacteria to whales, there is still little known about the impacts of viruses on the mesozooplankton community. As copepods are the most abundant mesozooplankton group, this study sought to characterize the viruses present in natural populations of the calanoid copepods Acartia tonsa and Labidocera aestiva in …

An Ecological Assessment Of A Juvenile Estuarine Sportfish, Common Snook (Centropomus Undecimalis), In A Tidal Tributary Of Tampa Bay, Florida, Adam Benjamin Brame

USF Tampa Graduate Theses and Dissertations

The common snook, Centropomus undecimalis, is an estuarine dependent sport fish that relies upon subtidal wetlands as nursery habitat. Despite the economic and recreational significance of this species, there are portions of its life history and biology that are poorly understood, particularly its early life history. Understanding juvenile snook use of wetland habitats is crucial given the rapid loss and degradation of these areas to anthropogenic impacts. Young-of-the-year snook were collected in pond and creek habitats of a single wetland system to assess early life ecology and habitat use. Proxies of habitat quality were used to determine which habitats …

A Ctd Biotag For Mid-Sized Marine Predators, Heather Broadbent

USF Tampa Graduate Theses and Dissertations

Biologging tools for investigating the study of fine-scale linkages between animal behavior and the physical microstructure of the marine habitat are technically limited by substantial size, high cost or low sensor resolution. However, recent advances in electronic technologies and process techniques present attractive alternatives to current tag designs. Motivated by the need for a low-cost, compact CTD biotag for medium-sized marine animals, the University of South Florida Center for Ocean Technology developed a multi-sensor biotag for quantitative measurements of ocean salinity. This dissertation describes the development and performance of a novel CTD biotag used for animal-borne measurements of the physical …

A Paleoclimate Modeling Experiment To Calculate The Soil Carbon Respiration Flux For The Paleocene-Eocene Thermal Maximum, David M. Tracy

Masters Theses 1911 - February 2014

The Paleocene-Eocene Thermal Maximum (PETM) (55 million years ago) stands as the largest in a series of extreme warming (hyperthermal) climatic events, which are analogous to the modern day increase in greenhouse gas concentrations. Orbitally triggered (Lourens et al., 2005, Galeotti et al., 2010), the PETM is marked by a large (-3‰) carbon isotope excursion (CIE). Hypothesized to be methane driven, Zeebe et al., (2009) noted that a methane based release would only account for 3.5°C of warming. An isotopically heavier carbon, such as that of soil and C3 plants, has the potential to account for the …

Interannual And Spatial Impacts Of Phenological Transitions, Growing Season Length, And Spring And Autumn Temperatures On Carbon Sequestration: A North America Flux Data Synthesis, Chaoyang Wu, Alemu Gonsamo, Jing Ming Chen, Werner A. Kurz, David T. Price, Peter M. Lafleur, Rachhpal S. Jassal, Danilo Dragoni, Gil Bohrer, Christopher M. Gough, Shashi B. Verma, Andrew E. Suyker, J. William Munger

School of Natural Resources: Faculty Publications

Understanding feedbacks of ecosystem carbon sequestration to climate change is an urgent step in developing future ecosystem models. Using 187 site-years of flux data observed at 24 sites covering three plant functional types (i.e. evergreen forests (EF), deciduous forests (DF) and non-forest ecosystems (NF) (e.g., crop, grassland, wetland)) in North America, we present an analysis of both interannual and spatial relationships between annual net ecosystem production (NEP) and phenological indicators, including the flux-based carbon uptake period (CUP) and its transitions, degree-day-derived growing season length (GSL), and spring and autumn temperatures. Diverse responses were acquired between annul NEP and these indicators …

In Situ Phytoplankton Analysis: There’S Plenty Of Room At The Bottom, Jeffrey S. Erickson, Nicole N. Hashemi, James M. Sullivan, Alan D. Weidemann, Frances S. Ligler

Nastaran Hashemi

Approximately 70% of the earth is covered with water, within which the most dominant organism is phytoplankton. Not only is phytoplankton at the base of the marine food web, but it also fixes excess carbon dioxide and regulates sulfur on a global scale.1 Changes in phytoplankton populations have been linked to toxicity to humans and marine life, pollution, and global climate change.2 Routine monitoring of both fresh and salt water ecosystems has been taking place formany years, with consortia set up explicitly for this purpose. Consensus indicates that five categories of information are useful for early warning systems.3,4 These are …

What Can We Learn From Past Warm Climates?, Raymond S. Bradley

Raymond S Bradley

With limited political action to control fossil fuel use and associated greenhouse gas emissions, there is increasing emphasis on preparing for inevitable climate changes. But what changes should the world plan for? Model simulations provide some guidance about expected future climate scenarios, but we can also learn from past experience. Although there are no episodes in the past that are strictly comparable to the future, which is a world in which climate is modulated by human activities, there were warm periods in the past which resulted from other forcing factors. There are some lessons we can learn from paleoclimate records …

Comparison Of The X-Track Altimetry Estimated Currents With Moored Adcp And Hf Radar Observations On The West Florida Shelf, Yonggang Liu, Robert H. Weisberg, Stefano Vignudelli, Laurent Roblou, Clifford R. Merz

Yonggang Liu

The performance of coastal altimetry over a wide continental shelf is assessed using multiple-year ocean current observations by moored Acoustic Doppler Current Profilers (ADCP) and high-frequency (HF) radar on the West Florida Shelf. Across-track, surface geostrophic velocity anomalies, derived from the X-TRACK along-track sea level anomalies are compared with the near surface current vector components from moored ADCP observations at mid shelf. The altimeter-derived velocity anomalies are also directly compared with the HF radar surface current vector radial components that are aligned perpendicular to the satellite track. Preliminary results indicate the potential usefulness of the along-track altimetry data in contributing …

Seasonal Variability On The West Florida Shelf, Yonggang Liu, Robert H. Weisberg

Yonggang Liu

The seasonal variations of the West Florida Continental Shelf (WFS) circulation and sea level are described using observations of velocity from an array of moored acoustic Doppler current profilers and various ancillary data. With record lengths ranging from 3 years to over a decade, a robust seasonal cycle in velocity is found, which varies across the shelf in a dynamically sensible way. Over most of the inner shelf these seasonal variations are primarily in response to local forcing, through Ekman-geostrophic spin-up, as previously found for the synoptic scale variability. Thus the inner shelf circulation is predominantly upwelling favorable from fall …

Simulation Of Coastal Inundation Instigated By Storm Surge And River Discharge In The Chesapeake Bay Using Sub-Grid Modeling Coupled With Lidar Data, J. D. Loftis, H. V. Wang

Presentations

Sub-grid modeling is a novel method by which water level elevations on the sub-grid level can be obtained through the combination of water levels and velocities efficiently calculated at the coarse computational grid, the discretized bathymetric depths, and local friction parameters without resorting to solve the full set of equations. Sub-grid technology essentially allows velocity to be determined rationally and efficiently at the sub-grid level. This salient feature enables coastal flooding to be addressed in a single cross-scale model from the ocean to the upstream river channel without overly refining the grid resolution. To this end, high-resolution DEMs will be …

Short-Period Gravity Waves Over Alaska, Michael Negale, Kim Nielsen, Michael J. Taylor, Britta Irving, Richard Collins

Physics Student Research

The propagation nature and sources of short-period gravity waves have been studied extensively at low and mid-latitudes, while their extent and nature at the polar regions are less known. During the last decade, observations from select sites on the Antarctic continent have revealed a significant presence of these waves over the southern Polar Region as well as shown unexpected dynamical behavior. In contrast, observations over the Arctic region are few and the dynamical behavior is unknown. A recent project was initiated in January 2011 to investigate the presence and dynamics of these waves over interior Alaska. This site provides an …

Assessing Delta Oxygen-18 In The Coral Genus Isopora For Reconstructing Indo-Pacific Regional And Seasonal Climate, Gavin Lemley

Legacy Theses & Dissertations (2009 - 2024)

Paleoclimate reconstructions often utilize coral reefs with very long time spans such as the genus Porites and Diploastrea, because of their potential to provide centuries of continuous climate records via geochemical signatures. Smaller corals, such as the genus Isopora, have been essentially unexplored as climate archives because their small skeletons (<1 m) and short lifespans (years to decades) do not provide such continuous geochemical records. There has not been a practical application for such corals until recently. In early 2010, the Integrated Ocean Drilling Program Leg 325 (IODP-325) cored drowned fossil reefs off the Great Barrier Reef (GBR) with the objectives of reconstructing sea level and surface ocean conditions since the Last Glacial Maximum. Out of 213 massive fossil corals that were recovered, most were massive Isoporan colonies. A 30-specimen subset of these fossils range in age from ~32,000 to ~11,500 years before present with even temporal spacing, based on preliminary U/Th dating of core catcher samples. This age distribution is excellent for meeting IODP-325 objectives, but the suitability of Isopora for paleoclimate analyses remains unknown.

Occurrence, Toxicity, And Diversity Of Pseudo-Nitzschia In Florida Coastal Waters, Sheila O'Dea

USF Tampa Graduate Theses and Dissertations

Domoic acid (DA), a potent neurotoxin that has the potential to cause amnesic shellfish poisoning (ASP), is produced by members of the marine diatom genus Pseudo-nitzschia. Outbreaks of ASP in humans and of DA poisoning in birds and marine mammals have been reported across the United States and Canada since the late 1980's. Pseudo-nitzschia species can be extremely abundant in Florida waters, with densities often exceeding 10⁶ cells/L, and sometimes exceeding 10⁷ cells/L. Based on preliminary data, it is evident that at least nine species of Pseudo-nitzschia are found in Florida coastal waters. At least six of …

Micronekton And Macrozooplankton Of The Western Antarctic Peninsula And The Eastern Ross Sea: Contrast Between Two Different Thermal Regimes, Melanie Leigh Parker

USF Tampa Graduate Theses and Dissertations

ABSTRACT

Micronekton and macrozooplankton were sampled from the Western Antarctic Peninsula (WAP) and eastern Ross Sea regions. Samples were collected over the course of six research cruises to the Southern Ocean. Four of those cruises were conducted in the Marguerite Bay region of the WAP during the austral fall and winter of 2001 and 2002. A fifth cruise sampled faunal assemblages at nine sites, ranging from Joinville Island at the northern tip of the WAP to Charcot Island near the southern extent of the WAP, during austral fall 2010. A sixth cruise was conducted in the pack ice within the …

On The Spatial And Temporal Variability Of Upwelling In The Southern Caribbean Sea And Its Influence On The Ecology Of Phytoplankton And Of The Spanish Sardine (Sardinella Aurita), Digna Tibisay Rueda-Roa

USF Tampa Graduate Theses and Dissertations

The Southern Caribbean Sea experiences a strong upwelling process along the coast from about 61°W to 75.5°W and 10-13°N. In this dissertation three aspects of this upwelling system are examined: (A) A mid-year secondary upwelling that was previously observed in the southeastern Caribbean Sea between June-July, when land based stations show a decrease in wind speed. The presence and effects of this upwelling along the whole southern Caribbean upwelling system were evaluated, as well as the relative forcing contribution of alongshore winds (Ekman Transport, ET) and wind-curl (Ekman Pumping, EP). (B) Stronger upwelling occurs in two particular regions, namely the …

Shelf-Scale Mapping Of Fish Distribution Using Active And Passive Acoustics, Carrie Christy Wall

USF Tampa Graduate Theses and Dissertations

Fish sound production has been associated with courtship and spawning behavior. Acoustic recordings of fish sounds can be used to identify distribution and behavior. Passive acoustic monitoring (PAM) can record large amounts of acoustic data in a specific area for days to years. These data can be collected in remote locations under potentially unsafe seas throughout a 24-hour period providing datasets unattainable using observer-based methods. However, the instruments must withstand the caustic ocean environment and be retrieved to obtain the recorded data. This can prove difficult due to the risk of PAMs being lost, stolen or damaged, especially in highly …

Thermal Determinants Of Nest Site Selection In Loggerhead Sea Turtles, Caretta Caretta, At Casey Key, Florida, Lindsey Nicole Flynn

USF Tampa Graduate Theses and Dissertations

Many environmental cues are thought to influence nest site selection by loggerhead sea turtles, Caretta caretta, and much debate exists over the possible influence of sand temperature. This study had two primary objectives: (1) to measure thermal differences across transects of a major nesting beach of Casey Key (28.7 N, 82.3 W), Florida and (2) to evaluate thermal pattern variation that influenced nesting patterns of adult female loggerhead sea turtles. A secondary objective of this study was to determine the efficacy of infrared thermometers to collect sand surface temperatures in the field.

Temperature data were collected from 145 nest …

Spatial And Temporal Variability Of Remotely Sensed Ocean Color Parameters In Coral Reef Regions, Daniel Brooks Otis

USF Tampa Graduate Theses and Dissertations

The variability of water-column absorption due to colored dissolved organic matter (CDOM) and phytoplankton in coral reef regions is the focus of this study. Hydrographic and CDOM absorption measurements made on the Bahamas Banks and in Exuma Sound during the spring of 1999 and 2000 showed that values of salinity and CDOM absorption at 440nm were higher on the banks (37.18 psu, 0.06 m^-1), compared to Exuma Sound (37.04 psu, 0.03 m^-1). Spatial patterns of CDOM absorption in Exuma Sound revealed that plumes of CDOM-rich water flow into Exuma Sound from the surrounding banks. To examine absorption variability in reef …

Responses To Chemical Exposure By Foraminifera: Distinguishing Dormancy From Mortality, Benjamin James Ross

USF Tampa Graduate Theses and Dissertations

The Deepwater Horizon blowout in 2010 released an estimated 4.9 million barrels of crude oil into the Gulf of Mexico in the 83 days between the initial explosion and the capping of the well. Response included extensive use of Corexit© oil dispersant. Although South Florida was spared exposure by currents, this event highlights the need for effective bioassay organisms for coral reefs. Amphistegina spp. are benthic foraminifers that host diatom symbionts in a relationship similar to that of coral and their zooxanthellae. Amphistegina spp. occur abundantly in reef communities nearly worldwide, are easily collected and maintained in culture, and are …

Optical Detection And Classification Of Phytoplankton Taxa Through Spectral Analysis, Daniel Tyler Sensi

USF Tampa Graduate Theses and Dissertations

Phytoplankton serve as the bottom of the marine food web and therefore play an essential role in marine ecosystems. On the other hand, coastal phytoplankton communities can adversely affect the marine ecosystem and humans. A variety of techniques have been developed to measure and study phytoplankton, including in situ methods (e.g., flow cytometry) and laboratory methods (e.g., microscopic taxonomy). These provide accurate measurements of phytoplankton taxa and concentrations, yet they are limited in space and time, and synoptic information is difficult to obtain with these techniques.

Optical remote sensing may provide complementary information for its synoptic nature, as demonstrated by …