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Glycomics Project Overview, Satya S. Sahoo Jan 2007

Glycomics Project Overview, Satya S. Sahoo

Kno.e.sis Publications

No abstract provided.


Brief Announcement: Space Adaptation: Privacy-Preserving Multiparty Collaborative Mining With Geometric Perturbation, Keke Chen, Ling Liu Jan 2007

Brief Announcement: Space Adaptation: Privacy-Preserving Multiparty Collaborative Mining With Geometric Perturbation, Keke Chen, Ling Liu

Kno.e.sis Publications

No abstract provided.


Schema-Driven Relationship Extraction From Unstructured Text, Cartic Ramakrishnan Jan 2007

Schema-Driven Relationship Extraction From Unstructured Text, Cartic Ramakrishnan

Kno.e.sis Publications

No abstract provided.


Semantically Annotating A Web Service, Kunal Verma, Amit P. Sheth Jan 2007

Semantically Annotating A Web Service, Kunal Verma, Amit P. Sheth

Kno.e.sis Publications

In the past few years, service-oriented architecture (SOA) has transitioned from a partially formed vision into a widely implemented paradigm, with Web services (WS) being the forerunners to implementing SOA-based solutions. But even though the current trend is to use Web services' standards-based nature to establish static connections between various components, businesses are starting to explore dynamic value-added propositions, such as reuse, interoperability, and agility.


Role Of Semantics In Autonomic & Adaptive Web Services And Processes, Amit P. Sheth Jan 2007

Role Of Semantics In Autonomic & Adaptive Web Services And Processes, Amit P. Sheth

Kno.e.sis Publications

The emergence of Service Oriented Architectures (SOA) has created a new paradigm of loosely coupled distributed systems. In the METEOR-S project, we have studied the comprehensive role of semantics in all stages of the life cycle of service and process-- including annotation, publication, discovery, interoperability/data mediation, and composition. In 2002-2003, we had offered a broad framework of semantics consisting of four types:1) Data semantics, 2) Functional semantics, 3) Non-Functional semantics and 4) Execution semantics. This talk describes the need for the four types of semantics, its standards-based support through WSDL-S/SAWSDL, and the need for such semantic representation to dynamic and …


Beyond Sawsdl - A Game Plan For Broader Adoption Of Semantic Web Services, Amit P. Sheth Jan 2007

Beyond Sawsdl - A Game Plan For Broader Adoption Of Semantic Web Services, Amit P. Sheth

Kno.e.sis Publications

After a flurry of research activities led by the OWL-S, WSMO, SWSF, and WSDL-S groups, we now have taken the first concrete steps toward building a Semantic Web Services (SWS) based solution, in the form of a W3C candidate recommendation SAWSDL [http://www.w3.org/2002/ws/sawsdl/], associated tools and use cases, and initial applications [1]. Where do we go from here? Researchers among us may be fully convinced of the importance and benefit of adding semantics to Web services and impatient to see their research translated into technologies and adapted for real use. However, I believe we may need to be patient and do …


Sa-Rest: Semantically Interoperable And Easier-To-Use Services And Mashups, Amit P. Sheth, Karthik Gomadam, Jonathan Lathem Jan 2007

Sa-Rest: Semantically Interoperable And Easier-To-Use Services And Mashups, Amit P. Sheth, Karthik Gomadam, Jonathan Lathem

Kno.e.sis Publications

Services based on the representational state transfer (REST) paradigm, a lightweight implementation of a service-oriented architecture, have found even greater success than their heavyweight siblings, which are based on the Web Services Description Language (WSDL.) and SOAP. By using XML-based messaging, RESTful services can bring together discrete data from different services to create meaningful data sets; mashups such as these are extremely popular today.


From “Glycosyltransferase” To “Congenital Muscular Dystrophy”: Integrating Knowledge From Ncbi Entrez Gene And The Gene Ontology, Satya S. Sahoo, Kelly Zeng, Olivier Bodenreider, Amit P. Sheth Jan 2007

From “Glycosyltransferase” To “Congenital Muscular Dystrophy”: Integrating Knowledge From Ncbi Entrez Gene And The Gene Ontology, Satya S. Sahoo, Kelly Zeng, Olivier Bodenreider, Amit P. Sheth

Kno.e.sis Publications

Entrez Gene (EG), Online Mendelian Inheritance in Man (OMIM) and the Gene Ontology (GO) are three complementary knowledge resources that can be used to correlate genomic data with disease information. However, bridging between genotype and phenotype through these resources currently requires manual effort or the development of customized software. In this paper, we argue that integrating EG and GO provides a robust and flexible solution to this problem. We demonstrate how the Resource Description Framework (RDF) developed for the Semantic Web can be used to represent and integrate these resources and enable seamless access to them as a unified resource. …


Survey Of Current Sensor Network Data Management Frameworks, Cory Henson, Satya S. Sahoo Jan 2007

Survey Of Current Sensor Network Data Management Frameworks, Cory Henson, Satya S. Sahoo

Kno.e.sis Publications

No abstract provided.


What, Where And When: Supporting Semantic, Spatial And Temporal Queries In A Dbms, Matthew Perry, Amit P. Sheth, Farshad Hakimpour, Prateek Jain Jan 2007

What, Where And When: Supporting Semantic, Spatial And Temporal Queries In A Dbms, Matthew Perry, Amit P. Sheth, Farshad Hakimpour, Prateek Jain

Kno.e.sis Publications

Spatial and temporal data are critical components in many applications. This is especially true in analytical domains such as national security and criminal investigation. The outcome of the analytical process in these applications often hinges on uncovering and analyzing complex relationships between disparate people, places and events. Fundamentally new query operators based on the graph structure of Semantic Web data models, such as semantic associations, are proving useful in these applications. However, these analysis mechanisms are primarily intended for thematic relationships. We describe a framework built around the RDF metadata model for analysis of thematic, spatial and temporal relationships between …


Learning To Model Spatial Dependency: Semi-Supervised Discriminative Random Fields, Chi-Hoon Lee, Shaojun Wang, Feng Jiao, Dale Schuurmans, Russell Greiner Jan 2007

Learning To Model Spatial Dependency: Semi-Supervised Discriminative Random Fields, Chi-Hoon Lee, Shaojun Wang, Feng Jiao, Dale Schuurmans, Russell Greiner

Kno.e.sis Publications

We present a novel, semi-supervised approach to training discriminative random fields (DRFs) that efficiently exploits labeled and unlabeled training data to achieve improved accuracy in a variety of image processing tasks. We formulate DRF training as a form of MAP estimation that combines conditional loglikelihood on labeled data, given a data-dependent prior, with a conditional entropy regularizer defined on unlabeled data. Although the training objective is no longer concave, we develop an efficient local optimization procedure that produces classifiers that are more accurate than ones based on standard supervised DRF training. We then apply our semi-supervised approach to train DRFs …


Collecting Expertise Of Researchers For Finding Relevant Experts In A Peer-Review Setting, Delroy H. Cameron, Boanerges Aleman-Meza, Ismailcem Budak Arpinar Jan 2007

Collecting Expertise Of Researchers For Finding Relevant Experts In A Peer-Review Setting, Delroy H. Cameron, Boanerges Aleman-Meza, Ismailcem Budak Arpinar

Kno.e.sis Publications

We present ideas for determining the expertise of researchers across various areas of computer science and for finding relevant experts/reviewers in a peer review setting. We explain how Semantic Web techniques for data collection and data representation using ontologies can be used in addressing this specific 'ExpertFinder' problem.


A Unified Approach To Retrieving Web Documents And Semantic Web Data, Trivikram Immaneni, Krishnaprasad Thirunarayan Jan 2007

A Unified Approach To Retrieving Web Documents And Semantic Web Data, Trivikram Immaneni, Krishnaprasad Thirunarayan

Kno.e.sis Publications

The Semantic Web seems to be evolving into a property-linked web of RDF data, conceptually divorced from (but physically housed in) the hyperlinked web of HTML documents. We discuss the Unified Web model that integrates the two webs and formalizes the structure and the semantics of interconnections between them. We also discuss the Hybrid Query Language which combines the Data and Information Retrieval techniques to provide a convenient and uniform way to retrieve data and documents from the Unified Web. We present the retrieval system SITAR and some preliminary results.


Evolution And Maintenance Of Frequent Pattern Space When Transactions Are Removed, Mengling Feng, Guozhu Dong, Jinyan Li, Yap-Peng Tan, Limsoon Wong Jan 2007

Evolution And Maintenance Of Frequent Pattern Space When Transactions Are Removed, Mengling Feng, Guozhu Dong, Jinyan Li, Yap-Peng Tan, Limsoon Wong

Kno.e.sis Publications

This paper addresses the maintenance of discovered frequent patterns when a batch of transactions are removed from the original dataset. We conduct an in-depth investigation on how the frequent pattern space evolves under transaction removal updates using the concept of equivalence classes. Inspired by the evolution analysis, an effective and exact algorithm TRUM is proposed to maintain frequent patterns. Experimental results demonstrate that our algorithm outperforms representative state-of-the-art algorithms.