Other Ecology and Evolutionary Biology Commons^™

Statistical And Comparative Phylogeography Of Mexican Freshwater Taxa In Extreme Aquatic Environments, Lyndon M. Coghill

University of New Orleans Theses and Dissertations

Phylogeography aims to understand the processes that underlie the distribution of genetic variation within and among closely related species. Although the means by which this goal might be achieved differ considerably from those that spawned the field some thirty years ago, the foundation and conceptual breakthroughs made by Avise are nonetheless the same and are as relevant today as they were two decades ago. Namely, patterns of neutral genetic variation among individuals carry the signature of a species’ demographic past, and the spatial and temporal environmental heterogeneity across a species’ geographic range can influence patterns of evolutionary change. Aquatic systems …

Random Search Models Of Foraging Behavior: Theory, Simulation, And Observation., Ben C. Nolting

Department of Mathematics: Dissertations, Theses, and Student Research

Many organisms, from bacteria to primates, use stochastic movement patterns to find food. These movement patterns, known as search strategies, have recently be- come a focus of ecologists interested in identifying universal properties of optimal foraging behavior. In this dissertation, I describe three contributions to this field. First, I propose a way to extend Charnov's Marginal Value Theorem to the spatially explicit framework of stochastic search strategies. Next, I describe simulations that compare the efficiencies of sensory and memory-based composite search strategies, which involve switching between different behavioral modes. Finally, I explain a new behavioral analysis protocol for identifying the …

First State Record And Interdiction For The Wood Slave, Hemidactylus Mabouia (Moreau De Jonnès 1818) (Gekkonidae), In Maryland, Usa., Louis A. Somma, William L. Grogan Jr.

Papers in Herpetology

The Wood Slave, Hemidactylus mabouia (Moreau de Jonnès 1818; Fig. 1), is indigenous to Africa south of the Sahara, with nonindigenous populations established in Cape Verde, Mexico, much of Central and South America, numerous localities in the Caribbean, perhaps Madagascar, and at least 21 counties in Florida, USA (Carranza and Arnold 2006; Kraus 2009; Krysko et al. 2011a, 2011b; Meshaka 2011; Powell and Henderson 2012). Recently, H. mabouia has successfully invaded temperate regions of southern Africa and northern peninsular Florida (Alexander and Marais 2007, Krysko and Somma 2007).

On 20 December 2012, Brian R. Grogan and Shane Forsythe collected and …

Body Size Variation In Two Adjacent Populations Of Black Kingsnakes (Lampropeltis Nigra) In East Tennessee, Jesse Weber, Joshua Ennen

Chancellor’s Honors Program Projects

No abstract provided.

The Role Of Morphology In Diet And Flower Visitation By Five Species Of Cuban Flower-Visiting Bats, Lindsey Clairmont

Electronic Thesis and Dissertation Repository

Pollinator and flower morphology are important factors in structuring the plant-pollinator relationship. A pollinator’s morphology may influence aspects of its diet. Flower-visiting bats are an important pollinator group but very little is known about what influences their interactions with food plants. I examined the role of morphology in the partitioning of food resources for five species of flower-visiting Cuban bats. I analyzed cranial traits and body size to examine differences among species and to determine the degree of morphological specialization for flower-feeding for each species. I also collected dietary data from guano and used acoustic monitoring to assess bat activity …

Water Stress Strengthens Mutualism Among Ants, Trees, And Scale Insects, Elizabeth G. Pringle, Erol Akc¸Ay, Ted K. Raab, Rodolfo Dirzo, Deborah M. Gordon

Ted K. Raab

Abiotic environmental variables strongly affect the outcomes of species interactions. For example, mutualistic interactions between species are often stronger when resources are limited. The effect might be indirect: water stress on plants can lead to carbon stress, which could alter carbon-mediated plant mutualisms. In mutualistic ant–plant symbioses, plants host ant colonies that defend them against herbivores. Here we show that the partners’ investments in a widespread ant–plant symbiosis increase with water stress across 26 sites along a Mesoamerican precipitation gradient. At lower precipitation levels, Cordia alliodora trees invest more carbon in Azteca ants via phloem-feeding scale insects that provide the …

Project Safe Flight: Making New York Safe For Migratory Birds, Kaitlyn L. Parkins, Susan B. Elbin Ph.D., Adriana Palmer, Darren Klein, Elle Barnes

Publications and Research

More than 100 species of migratory birds pass through New York City during spring and fall migrations. Located at the nexus of several migratory routes, New York City’s tall buildings and reflective glass pose a serious threat to over 100 species of migratory birds. Since 1997, NYC Audubon has led Project Safe Flight (PSF), a volunteer-based citizen-science project, with the goal of monitoring and mitigating bird collisions. We examined 16 years of PSF data, during which volunteers collected over 6,000 birds of 126 different species. The top two species, White-throated Sparrow and Common Yellowthroat, make up 23% of all collisions. …

Helminth Parasites Of The Raccoon (Procyon Lotor), Virginia Opossum (Didelphis Virginiana), And Striped Skunk (Mephitis Mephitis) From Keith County, Nebraska, Dennis J. Richardson

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Nine raccoons (Procyon lotor), 6 Virginia opossums (Didelphis virginiana), and 1 striped skunk (Mephitis mephitis) collected from Keith County, Nebraska were examined for helminth parasites. Raccoons were infected with the nematodes Arthrocephalus lotoris, Baylisascaris procyonis, and Capillaria plica, the trematode Fibricola cratera, and the tapeworm Atriotaenia procyonis. Opossums were infected with 1 nematode, 1 trematode, and 1 cestode species: Physaloptera turgida, Plagiorhchis elegans, and Oochoristica sp., respectively. The single striped skunk was infected with the nematode Physaloptera maxillaris and the cestodes Mesocestoides sp. and Oochoristica sp.

Wildlands Conservancy/Connick Ranch Research, Susie Van Kirk

Susie Van Kirk Papers

Susie Van Kirks research notes on the Wildlands Conservancy and Connick Ranch. Includes newspaper references, interviews, as well as deed, survey and patent information.

Distribution Of Chinook Salmon (Oncorhynchus Tshawytscha) In Upper-Columbia River Sub-Basins From Environmental Dna Analysis, Matthew Benjamin Laramie

Boise State University Theses and Dissertations

Determining accurate species distribution is crucial to conservation and management strategies for imperiled species, but challenging for small populations that are approaching extinction or being reestablished. We evaluated the efficacy of environmental DNA (eDNA) analysis for improving detection and thus known distribution of Chinook salmon in the Methow and Okanogan Sub-basins of the Upper-Columbia River, Washington, USA. We developed an assay to target a 90 base pair sequence of Chinook DNA and used quantitative polymerase chain reaction (qPCR) to quantify the amount of Chinook eDNA in 1-L water samples collected at 48 sites in the sub-basins. We collected samples once …

Niche Syndromes, Species Extinction Risks, And Management Under Climate Change, Dov F. Sax, Regan Early, Jesse Bellemare

Biological Sciences: Faculty Publications

The current distributions of species are often assumed to correspond with the total set of environmental conditions under which species can persist. When this assumption is incorrect, extinction risk estimated from species distribution models can be misleading. The degree to which species can tolerate or even thrive under conditions found beyond their current distributions alters extinction risks, time lags in realizing those risks, and the usefulness of alternative management strategies. To inform these issues, we propose a conceptual framework within which empirical data could be used to generate hypotheses regarding the realized, fundamental, and 'tolerance' niche of species. Although these …

Jellyfish Identification And Quantification In The San Francisco Estuary, Amalia Borson, Lindsay L. Sullivan, Wim Kimmerer

STAR Program Research Presentations

As potential predators and competitors of plankton-eating fish, jellyfish have the potential to negatively impact fish populations. Jellyfish were collected weekly with plankton tows from the RombergTiburonCenterpier in Tiburon, CA. Since some jellyfish were too small to identify, one tow was collected and preserved to record abundances, and a second tow was collected to rear jellyfish until distinguishing characteristics were visible enough for identification. Jellyfish in the preserved tows were then identified, measured, and counted, and their abundance (number m^-3) was calculated. Jellyfish from the second tows were reared in plastic buckets that were lightly bubbled using aquarium …

Cold Tolerance Of The Eastern Subterranean Termite, Reticulitermes Flavipes (Isoptera: Rhinotermitidae), In Ontario., Matthew W. Clarke, Graham J. Thompson, Brent J Sinclair

Biology Publications

We characterized the cold tolerance of natural populations of the Eastern subterranean termite (Reticulitermes flavipes (Kollar) [Isoptera, Rhinotermitidae]) in southwestern Ontario, Canada. We measured cold tolerance in workers from six colonies of termites established from Pelee Island in Lake Erie, and Point Pelee National Park. The mean critical thermal minimum, at which termites entered chill coma, ranged from 8.1 to 5.7°C. Mean supercooling points (SCP, the temperature at which individuals freeze) ranged from -4 to -4.6°C, and did not differ significantly between colonies, nor was SCP dependent on body size. Individuals survived brief exposure to low temperatures, as long as …

Greater Prairie-Chicken Nest Success And Habitat Selection In Southeastern Nebraska, Ty W. Matthews, Andrew J. Tyre, J. Scott Taylor, Jeffrey J. Lusk, Larkin A. Powell

School of Natural Resources: Faculty Publications

Greater prairie-chickens (Tympanuchus cupido pinnatus) are reported to benefit from grasslands created through the Conservation Reserve Program (CRP). Prairie-chicken population size increased noticeably in southeastern Nebraska after >15% of county-level landscapes were converted to CRP grasslands. But, the mechanisms behind the increase in population size are not well understood, and managers and policy makers could benefit from evidence of CRP’s relative contribution to populations of prairie-chickens. Therefore, our objectives were to characterize the relations of vegetation structure and composition with prairie-chicken nest-site selection and nest survival rates at both the macrohabitat (within landscape of study site) and microhabitat …

Feeding Ecology Of Delta Smelt During A Seasonal Pulse Of Turbidity, William A. Hilton, Aaron Johnson, Wim Kimmerer

STAR Program Research Presentations

The delta smelt (Hypomesus transpacificus) is a small, pelagic fish endemic to the San Francisco Estuary (SFE) and protected under federal and state endangered species acts. This study examines the diet of adult delta smelt during their spawning migration in the winters of 2010 and 2012. Delta smelt and their zooplankton prey were sampled concurrently during a seasonal pulse of turbidity at sites along their migratory route from the low salinity zone in Suisun Bay to the fresher waters of the Sacramento/San Joaquin Delta. Gut contents were identified to the lowest possible taxon and counted, along with zooplankton …

Warming Winters And Changing Habitats: Interactive Effects On Raptor Populations And Implications For Conservation, Neil A. Paprocki

Boise State University Theses and Dissertations

Studies across multiple spatial and temporal scales will improve understanding of the drivers of global change including habitat degradation, invasive species, and climate change. How global drivers affect the ecology of wintering raptors in western North America and the Great Basin may have important implications for changes in distribution and abundance, and consequently population persistence. I examined the winter distributions of six western North America raptor species using Christmas Bird Count data from 1975-2011 to assess range shifts over time and in relation to temperature. Also, I considered whether population patterns within Bird Conservation Regions (BCR) were best explained by …

Pelagic Larval Duration Links Life History Traits And Species Persistence In Darters (Percidae: Etheostomatinae), Morgan Jessica Douglas

Masters Theses

Pelagic larval duration (PLD) likely influences evolutionary processes including dispersal, genetic connectivity, and extinction in aquatic organisms. PLD has been well studied in marine systems, but very few freshwater species have been studied. Darters are a diverse group of freshwater North American fish with available information on the length of this stage from propagation efforts. There is surprising variation in the length of this stage ranging from 0 to 60 days. By compiling information from Conservations Fisheries, Inc. (Knoxville, TN) and the literature, we were able to make comparisons between the PLD of 23 species and other life history characteristics. …

Comparative Approaches To Studying Strategy: Towards An Evolutionary Account Of Primate Decision Making, Sarah F. Brosnan, Michael J. Beran, Audrey E. Parrish, Sara A. Price, Bart J. Wilson

Economics Faculty Articles and Research

How do primates, humans included, deal with novel problems that arise in interactions with other group members? Despite much research regarding how animals and humans solve social problems, few studies have utilized comparable procedures, outcomes, or measures across different species. Thus, it is difficult to piece together the evolution of decision making, including the roots from which human economic decision making emerged. Recently, a comparative body of decision making research has emerged, relying largely on the methodology of experimental economics in order to address these questions in a cross-species fashion. Experimental economics is an ideal method of inquiry for this …

Assessing And Analyzing Bat Activity With Acoustic Monitoring: Challenges And Interpretations, Amanda M. Adams

Electronic Thesis and Dissertation Repository

Acoustic monitoring is a powerful technique for learning about the ecology of bats, but understanding sources of variation in the data collected is important for unbiased interpretation. The objectives of this dissertation were to investigate sources of variation in acoustic monitoring and make recommendations for acoustic survey design and analysis. I addressed this goal in three ways: i) variation resulting from differences in bat detectors, ii) methods for objective identification of peak activity, and iii) the use of stationary transects to address within-site spatial variation.

First, I compared variation of detection of echolocation calls among commonly available bat detectors and …

Effects Of Multiple Ecological Drivers On Recruitment And Succession Of Coral Reef Macroalgal Communities, Alain Duran

FIU Electronic Theses and Dissertations

The study evaluated the effects of herbivory pressure, nutrient availability and potential propagule supply on recruitment and succession of coral reef macroalgal communities. Recruitment and succession tiles were placed in a nutrient-herbivory factorial experiment and macroalgal abundances were evaluated through time. Proportional abundances of macroalgal form-functional groups on recruitment and succession tiles were similar to field established communities within treatments, evidencing possible effects of adult macroalgae as propagule supply. Macroalgal abundance of recruitment tiles increased with nutrient loading and herbivory reduction combined whereas on succession tiles nutrient loading increased abundance of articulated-calcareous only when herbivores were excluded. Macroalgal field established …

Ectoparasites Of The Virginia Opossum (Didelphis Virginiana), Raccoon (Procyon Lotor), And Striped Skunk (Mephitis Mephitis) From Keith County, Nebraska, Lance A. Durden, Dennis J. Richardson

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Six Virginia opossums (Didelphis virginiana), nine raccoons (Procyon lotor) and one striped skunk (Mephitis mephitis) collected from Keith County Nebraska were examined for ectoparasites. All three host species were parasitized by adults of the American dog tick, Dermacentor variabilis. Opossums were also parasitized by the flea Pulex simulans and the tiny fur mite Didelphilichus serri­fer; the latter species represents a new state record for Nebraska. Raccoons were also parasitized by P. simulans and by the lago­morph-associated flea Euhoplopsyllus glacialis affinis, whereas the skunk was also parasitized by the chewing louse Neotrichodectes …

Overwintering In New Zealand Stick Insects, Alice B. Dennis, Luke T. Dunning, Christopher J. Dennis, Brent J. Sinclair, Thomas R. Buckley

Biology Publications

Stick insects are found in a variety of habitats throughout New Zealand, including at least four species that occur at high altitudes. Here they face physiological challenges that differ from their typically warmer lowland habitats, but their strategies to deal with harsh winter conditions are not known. Autumn and winter field surveys, coupled with caging experiments, were conducted to determine which life stages are overwintering in montane and lowland habitats. Data loggers were placed for approximately one year at each site to measure the leaf litter and canopy microhabitat temperatures. From this, we have found that alpine and lowland stick …

Patch Burning: Integrating Fire And Grazing To Promote Heterogeneity, John R. Weir, Samuel D. Fuhlendorf, David M. Engle, Terrence G. Bidwell, D. Chad Cummings, R. Dwayne Elmore, Ryan F. Limb, Brady W. Allred, J. Derek Scasta, Stephen L. Winter

United States Fish and Wildlife: Staff Publications

Heterogeneity refers to the differences in habitats across the landscape, and it is required for diverse plant and wildlife communities. Some heterogeneity is inherent, caused by differences in soils, while most heterogeneity is disturbance driven. Climate, fire, and grazing are the main three disturbance factors that have historically shaped the landscape. All three are still very important to the continued diversity and health of the plants and animals associated with our prairies, shrublands, and forestlands across the Great Plains. While we cannot control the climate, we can manage grazing by stocking rate, season of use, and kind and type of …

Reexamination Of Herpetofauna On Mormon Island, Hall County, Nebraska, With Notes On Natural History, Keith Geluso, Mary J. Harner

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The Platte River in central Nebraska, USA, was historically surrounded by mixed grass and tallgrass prairies and wet meadows, but many of those habitats were lost or altered during the last century with unknown effects on animals that reside in them. Researchers first surveyed herpetofauna on part of a large island preserve in the Platte River, Mormon Island, Hall County, Nebraska, in 1980 when the land was protected for conservation. They documented 10 species, including three species of amphibians and seven species of reptiles. We inventoried herpetofauna after 30 years of conservation management on Mormon Island and adjacent Shoemaker Island. …

Fish And Decapod Community Structure In Estuarine Habitats Of The New Orleans Land Bridge, Including A Description Of The Life Cycle Of Tarpon (Megalops Atlanticus) In Southeastern Louisiana, William Stein Iii

University of New Orleans Theses and Dissertations

Estuarine marshes are generally considered to be productive but not necessarily diverse ecosystems. During 24 consecutive months, I collected 65,000 fishes and decapods comprising over 65 species from the New Orleans Land Bridge, an estuarine salt marsh. My research details the distribution of nekton across five contiguous but geomorphically different regions, which I defined as “Areas”. This factor “Area” was significant in explaining community composition differences in 11 of the 24 months I evaluated. That is, during those 11 months community structure was different among the Areas. Specific “month” was also found to be a significant factor as community structure …

Amphibian Occupancy And Functional Connectivity Of Restored Wetlands In The Missouri River Floodplain, Michelle L. Hellman

School of Natural Resources: Dissertations, Theses, and Student Research

Wetland decline may threaten many taxa including shorebirds, amphibians, and fish. As agencies increase restoration of wetland habitat, monitoring is crucial to inform the process. Permeable skin sensitive to water quality and biphasic life histories requiring both terrestrial and aquatic habitat make amphibians good indicators of wetland health. I modeled amphibian occupancy in restored Missouri River bends to determine habitat characteristics associated with the presence of amphibians.

Occupancy modeling acknowledges imperfect detection and allows the inclusion of detection covariates. To assess detection I examined two methods currently used to assess anuran occupancy in wetlands, aural anuran surveys and tadpole dip-netting. …

Ant Community Dynamics And The Effects Of Global Warming, Katharine Lisa Stuble

Doctoral Dissertations

This dissertation seeks to provide an understanding of how species coexist and, further, how climate change may alter communities by acting on the mechanisms that promote coexistence. Specifically, I examined coexistence among ant species in eastern deciduous forests and the effects that warming may have on foraging activity. Through a series of field observations, I sought evidence for the importance of four of the most commonly cited mechanisms for coexistence among ant species: the dominance – discovery tradeoff, the dominance – thermal tolerance tradeoff, spatial segregation, and niche partitioning. In this system, I did not find evidence for any of …

Federal Conservation Spending Allocated By Agency, Emily Clare Manneschmidt

Chancellor’s Honors Program Projects

No abstract provided.

Genetic Variation And Dispersal In Penstemon Hirsutus And P. Tenuiflorus, Anna Katherine Becker

Masters Theses

Studying plant-pollinator relationships essential for understanding angiosperm evolution. In the large endemic genus Penstemon (Plantaginaceae), shifts in pollination syndrome are proposed to be important for explaining taxonomic and morphological diversity (Wilson et al., 2004; Wolfe et al., 2006). However, little work has been done to determine the relationship between morphological and genetic divergence within pollination syndromes. This study utilized genetic data to explore whether divergence in corolla morphology among nine closely related, bee pollinated Penstemon species was consistent with pollinator-driven selection.

Bee pollinated species in Penstemon subsection Penstemon are often divided into two morphological groups based on inflation of the …

A Phylogeny And Revised Classification Of Squamata, Including 4161 Species Of Lizards And Snakes, R. Alexander Pyron, Frank T. Burbrink, John J. Wiens

Publications and Research

Background: The extant squamates (>9400 known species of lizards and snakes) are one of the most diverse and conspicuous radiations of terrestrial vertebrates, but no studies have attempted to reconstruct a phylogeny for the group with large-scale taxon sampling. Such an estimate is invaluable for comparative evolutionary studies, and to address their classification. Here, we present the first large-scale phylogenetic estimate for Squamata.

Results: The estimated phylogeny contains 4161 species, representing all currently recognized families and subfamilies. The analysis is based on up to 12896 base pairs of sequence data per species (average = 2497 bp) from 12 genes, …