Other Ecology and Evolutionary Biology Commons^™

The Shellfish Corner: Aquaculture Of Exotic Shellfish Species, Michael A. Rice

Michael A Rice

Ocean Acidification And Predator-Prey Relations: Correlating Disruption Of Predator Avoidance With Chemosensory Deficits, Alexandra Fw Sidun, William G. Wright

Student Scholar Symposium Abstracts and Posters

One of the most destructive effects of global climate change is the increased carbon sequestering and consequential acidification of our world’s oceans. The impacts of ocean acidification on marine organisms are still relatively unknown, especially effects on behavioral ecology. Avoiding predation has emerged from recent behavioral ecology literature as a critical feature in the life history of a wide array of animal species; experiments on marine fishes suggest acidic water compromises their predator-avoidance abilities. Recent assays in our lab suggest predator-induced behavior is reduced by weakly acidic water. These experiments do not address the potential factor of generalized malaise caused …

What Would The Babel Fish Say?, Monica Gagliano

Animal Sentience

Starting with its title, Key’s (2016) target article advocates the view that fish do not feel pain. The author describes the neuroanatomical, physiological and behavioural conditions involved in the experience of pain in humans and rodents and confidently applies analogical arguments as though they were established facts in support of the negative conclusion about the inability of fish to feel pain. The logical reasoning, unfortunately, becomes somewhat incoherent, with the arbitrary application of the designated human criteria for an analogical argument to one animal species (e.g., rodents) but not another (fish). Research findings are reported selectively, and questionable interpretations are …

Quantifying The Success Of Eastern Oyster Pilot Reefs In Brevard County, Florida, Lacie Anderson

Honors Undergraduate Theses

Crassostrea virginica, the eastern oyster, is a native keystone species that inhabits many coastal and estuarine ecosystems along the Atlantic seaboard. Introduction of the eastern oyster into estuarine areas with limited current populations is gaining popularity as a pro-active approach to improve estuarine water quality. In November 2014 and April 2015, a total of five pilot oyster reef treatments were deployed in Brevard County: bagged adult oysters (grown by community members under their docks through oyster gardening) collected in fall 2014 and spring 2015, bagged clean shell, oyster restoration mats, and empty plots (control). Locations of deployment included a …

Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters

University Faculty and Staff Publications

Marine species with planktonic larvae often have high spatial and temporal variation in recruitment that leads to subsequent variation in the ecology of benthic adults. Using a combination of published and unpublished data, we compared the population structure of the salt marsh snail, Littoraria irrorata, between the South Atlantic Bight and the Gulf Coast of the United States to infer geographic differences in recruitment and to test the hypothesis that the Deepwater Horizon oil spill led to widespread recruitment failure of L. irrorata in Louisiana in 2010. Size-frequency distributions in both ecoregions were bimodal, with troughs in the distributions consistent …

Phytoplankton Pigment Specific Growth And Losses Due To Microzooplankton Grazing In A Northern Gulf Of Mexico Estuary During Winter/Fall, Amanda M. Mcgehee, Donald G. Redalje

Gulf and Caribbean Research

Microzooplankton dilution grazing experiments were carried out on 6 dates, over a 3 month period at 2 locations in the Bay of St. Louis, MS (BSL) to determine phytoplankton pigment specific growth rates under natural (µ₀) and replete (µ_n) nutrient conditions and microzooplankton grazing. We hypothesized that diatoms would be the largest portion of the phytoplankton composition due to the winter/fall season and that these organisms would have the highest growth/grazing rates. We suspected that river flow from the Jourdan River would adversely affect growth and grazing rates of all phytoplankton classes. Growth rates of 5 …

Rare Occurrences Of Free-Living Bacteria Belonging To Sedimenticola From Subtidal Seagrass Beds Associated With The Lucinid Clam, Stewartia Floridana, Aaron M. Goemann

Masters Theses

Lucinid clams and their sulfur-oxidizing endosymbionts comprise two compartments of a three-stage, biogeochemical relationship among the clams, seagrasses, and microbial communities in marine sediments. A population of the lucinid clam, Stewartia floridana, was sampled from a subtidal seagrass bed at Bokeelia Island Seaport in Florida to test the hypotheses: (1) S. floridana, like other lucinids, are more abundant in seagrass beds than bare sediments; (2) S. floridana gill microbiomes are dominated by one bacterial operational taxonomic unit (OTU) at a sequence similarity threshold level of 97% (a common cutoff for species level taxonomy) from 16S rRNA genes; …

Haverstraw Bay Benthic Habitat Characterization, Robert M. Cerrato, Alison M. Flanagan, Roger D. Flood

School of Marine & Atmospheric Sciences Faculty Publications

High-resolution backscatter and bathymetric maps created by multibeam and sidescan sonar surveys were used to identify five different seafloor bottom types within Haverstraw Bay. Grab samples were collected within these areas to characterize sediment properties and macrofauna. Selected sampling locations were revisited and seafloor images were obtained with an HD underwater camera. Multivariate analysis was used to identify the most important factors explaining variations in community structure. Results indicated that categorical variables defining bottom types, grain size, and water depth can explain about 42% of community structure variation. In addition, shell length data collected for Rangia cuneata, an introduced …

Herbivore Impacts On The Invasive Marine Alga Grateloupia Turuturu, Emily Bishop, Carol Thornber

Senior Honors Projects

Invasive species have the ability to outcompete natives, and can create a monoculture if not mitigated by herbivores or some other mechanism. Limited information exists on the ecology of the invasive macroalga Grateloupia turuturu and how it is impacted by herbivores. Using laboratory mesocosm experiments, we investigated the ability of two invasive herbivore species common in Rhode Island, the snail Littorina littorea and Asian shore crab Hemigrapsus sanguineus, to control Grateloupia populations. In the first trial, Grateloupia was provided to a single herbivore (either Littorina or Hemigrapsus) or both herbivores together. Grateloupia controls were in the same mesocosms …

A Comparative Study Of Concurrent Acoustic And Diver Survey Data, And Fish Community Descriptions Of A High Latitude Coral Reef, Florida, Usa, Adam M. Zenone

FIU Electronic Theses and Dissertations

Fisheries independent data on relatively unstudied nekton communities were used to explore the efficacy of new tools to be applied in the investigation of shallow coastal coral reef habitats. These data obtained through concurrent diver visual and acoustic surveys provided descriptions of spatial community distribution patterns across seasonal temporal scales in a previously undocumented region. Fish density estimates by both diver and acoustic methodologies showed a general agreement in ability to detect distributional patterns across reef tracts, though magnitude of density estimates were different. Fish communities in southeastern Florida showed significant trends in spatial distribution and seasonal abundance, with higher …

Shifts In Attack Behavior Of An Important Kelp Forest Predator Within Marine Reserves, J. S. Berriman, M. C. Kay, D. C. Reed, A. Rassweiler, D. A. Goldstein, William G. Wright

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Marine reserves have become increasingly valuable tools with which to manage ecosystems. These reserves consistently restore populations of top predators, often reducing availability of their favored prey. We hypothesized that such prey reduction in reserves causes protected predators to alter their attack behavior to include less palatable prey, potentially amplifying top-down effects on community structure. To test this hypothesis, we presented the relatively unpalatable sea hare Aplysia californica to freely foraging spiny lobsters Panulirus interruptus in 4 marine no-take reserves, each paired with an adjacent fished area. We found that lobsters only attacked sea hares inside reserves, where lobster density …

Identification Of Saccharina Groenlandica (Phaeophyceae) Around The Svalbard Archipelago: Dna Barcoding Using Cytochrome C Oxidase Subunit 1 (Coi), Anniken Lydon

Master's Theses

In the Arctic, brown algae (kelps) and seaweeds are ecologically important: providing habitat, protection, and nutrients for invertebrate and vertebrate species living in nearshore environments. Migrations of biota between the North Pacific and North Atlantic Oceans have occurred periodically during Earth’s history leading to colonization of the Arctic Ocean. Around 3.5 Mya the “Great Trans-Arctic Biotic Interchange” occurred and the Laminariales order of kelp, thought to be of North Pacific origin, underwent a massive radiation and speciation event around the Arctic Ocean. Phylogenetic analysis performed on “Laminaria-like” specimens collected from six sampling locations around the Svalbard Archipelago identified …

Fishes Of The Choctawhatchee River System In Southeastern Alabama And Northcentral Florida, Thomas P. Simon, Charles C. Morris, Bernard R. Kuhajda, Carter R. Gilbert, Henry L. Bart Jr., Nelson Rios, Paul M. Stewart, Thomas P. Simon Iv, Mitt Denney

Southeastern Fishes Council Proceedings

The diversity and distribution of fish species occurring in the Choctawhatchee River drainage in southeastern Alabama and northcentral Florida were surveyed to obtain historical baseline information. Three hundred seventy-four sites were evaluated for species diversity and distribution in the drainage, including compilation of unpublished records from southeastern natural history museums. The greatest diversity at any single site was 37 species. Sixty-eight sites were represented by 15 species or more, and 26 sites were represented by a single species. The most frequently encountered species includes Gambusia holbrooki, Percina nigrofasciata, Esox americanus, Notropis texanus, Lepomis macrochirus, Cyprinella n. sp. cf venusta, …

Mussels As Samplers Of Regional Microplastic Contamination Trends, Nick Lyon

Summer Research

The effect of microplastics on marine invertebrates is almost completely unknown, and must be studied if marine habitats are to be protected from further damage. This research begins to clarify the environmental and physiological factors that affect microplastic contamination in Mytilus mussels. The tissues of mussels were examined for the presence of microplastic particles. Plastic particulates were measured for size and documented to determine if significant differences were present between mussels of different sizes, at different tidal positions, and at different locations around Puget Sound. Significant levels of microplastic contamination were found, with some statistically relevant trends.

Non-Consumptive Effects Of Predators In Coral Reef Communities And The Indirect Consequences Of Marine Protected Areas, Laura Catano

FIU Electronic Theses and Dissertations

Predators exert strong direct and indirect effects on ecological communities by intimidating their prey. Non-consumptive effects (NCEs) of predators are important features of many ecosystems and have changed the way we understand predator-prey interactions, but are not well understood in some systems. For my dissertation research I combined a variety of approaches to examine the effect of predation risk on herbivore foraging and reproductive behaviors in a coral reef ecosystem. In the first part of my dissertation, I investigated how diet and territoriality of herbivorous fish varied across multiple reefs with different levels of predator biomass in the Florida Keys …

Salinity Distribution Of Microplankton In The San Francisco Estuary, Carrie Ann Sharitt, Lindsay Sullivan, Wim Kimmerer

STAR Program Research Presentations

Microplankton are a diverse group of planktonic organisms ranging from 0.02 to 0.2 millimeters. Since the group is defined solely by size, it spans numerous taxonomic groups, including both heterotrophs and autotrophs. Microplankton are abundant in all aquatic ecosystems and are important prey for many organisms, including bivalves, crustaceans, and fish. The San Francisco Bay is truly an estuary as saltwater enters the estuary under the Golden Gate Bridge and freshwater flows in from the Sacramento and San Joaquin Rivers. Thus, there is a gradient of salinity from freshwater (0) in the rivers to saltwater by the Golden Gate Bridge …

Factors In Long-Term Algal Composition Of Cayman Reefs: Determining Effects Of Natural Disturbance And Grazer Pressures, Patrick J. Doughty

Lawrence University Honors Projects

Abstract. Current research shows a worldwide shift in the population dynamics of reefs attributed to increasing human disturbance. With increasing nutrient additions, competitive populations of turf and macroalgae bloom and dominate coral reefs leading to decreased health of the reef as a whole. Unfortunately, few studies have been done showing the long-term changes in algae composition on reefs. In order to find the significant factors in the long-term composition of algae on reefs, algae and fish abundance data were collected through the Lawrence University Marine Program and analyzed for this study. Algae were split into three functional groups: encrusting, turf …

Coral-Fish Dynamics And Interactions: A Case Study Of Grand Cayman, Eileen Shea Davis

Lawrence University Honors Projects

To better understand the ecological interactions of coral reefs, it is important to understand the mechanisms that control the distribution and abundance of reef-building corals as well as the mechanisms that control the diversity and abundance of the fish community that inhabits these reef habitats. The purpose of this study was to identify specific coral-fish interactions among the reefs of Grand Cayman in order to gain insight into the biological effects of fish on the assemblage of hard corals. Using data collected by the Lawrence University Marine Program (LUMP), a number of exploratory statistical analyses were run in order to …

Effects Of Multiple Ecological Drivers On Recruitment And Succession Of Coral Reef Macroalgal Communities, Alain Duran

FIU Electronic Theses and Dissertations

The study evaluated the effects of herbivory pressure, nutrient availability and potential propagule supply on recruitment and succession of coral reef macroalgal communities. Recruitment and succession tiles were placed in a nutrient-herbivory factorial experiment and macroalgal abundances were evaluated through time. Proportional abundances of macroalgal form-functional groups on recruitment and succession tiles were similar to field established communities within treatments, evidencing possible effects of adult macroalgae as propagule supply. Macroalgal abundance of recruitment tiles increased with nutrient loading and herbivory reduction combined whereas on succession tiles nutrient loading increased abundance of articulated-calcareous only when herbivores were excluded. Macroalgal field established …

Fish And Decapod Community Structure In Estuarine Habitats Of The New Orleans Land Bridge, Including A Description Of The Life Cycle Of Tarpon (Megalops Atlanticus) In Southeastern Louisiana, William Stein Iii

University of New Orleans Theses and Dissertations

Estuarine marshes are generally considered to be productive but not necessarily diverse ecosystems. During 24 consecutive months, I collected 65,000 fishes and decapods comprising over 65 species from the New Orleans Land Bridge, an estuarine salt marsh. My research details the distribution of nekton across five contiguous but geomorphically different regions, which I defined as “Areas”. This factor “Area” was significant in explaining community composition differences in 11 of the 24 months I evaluated. That is, during those 11 months community structure was different among the Areas. Specific “month” was also found to be a significant factor as community structure …

The Effects Of Thermal Stress And Algal Competition On The Early Life-History Stages Of Porites Astreoides And The Development Of Stress-Detecting Biomarkers For Use In Scleractinan Corals, Kevin C. Olsen

UNF Graduate Theses and Dissertations

Scleractinian coral populations are declining worldwide in response to numerous stressors operating on both global and regional scales. Rising sea surface temperatures associated with global climate change and the increasing frequency of coral-macroalgae competitive interactions are two of the gravest ecological drivers facing coral reef ecosystems. However, little is known about how these stressors interact to impact corals, their health, and potential modes of population recovery. These threats also highlight the need to develop reliable techniques that detect stress in multiple life-history stages of hermatypic corals prior to the degradation of coral reef habitats. To address these concerns we evaluated …

The “Curse Of Rafinesquina:” Negative Taphonomic Feedback Exerted By Strophomenid Shells On Storm-Buried Lingulids In The Cincinnatian Series (Katian, Ordovician) Of Ohio, Rebecca Freeman, Benjamin Dattilo, Aaron Morse, Michael Blair, Steve Felton, John Pojeta

Benjamin F. Dattilo

Taphonomic feedback is the idea that accumulation of organic remains either enhances the habitat for some organisms (positive taphonomic feedback), and/or degrades the habitat for others (negative taphonomic feedback). Examples of epibionts living on skeletal remains are direct evidence of positive taphonomic feedback. Disruption of infaunal burrowing activities by skeletal fragments is an example of negative taphonomic feedback; direct fossil evidence of this phenomenon has not been documented previously. Infaunal organisms are vulnerable to exhumation or entombment during storms, but organisms that burrow can also re-establish viable life positions subsequently. For example, when modern lingulids re-burrow after exhumation, they first …

Evolutionary Adaptation Of Marine Zooplankton To Global Change, Hans Dam

Hans G. Dam

Predicting the response of the biota to global change remains a formidable endeavor. Zooplankton face challenges related to global warming, ocean acidification, the proliferation of toxic algal blooms, and increasing pollution, eutrophication, and hypoxia. They can respond to these changes by phenotypic plasticity or genetic adaptation. Using the concept of the evolution of reaction norms, I address how adaptive responses can be unequivocally discerned from phenotypic plasticity. To date, relatively few zooplankton studies have been designed for such a purpose. As case studies, I review the evidence for zooplankton adaptation to toxic algal blooms, hypoxia, and climate change. Predicting the …

Marine Fungi Of U.S. Gulf Of Mexico Barrier Island Beaches: Biodiversity And Sampling Strategy, Allison Kathleen Walker

Dissertations

Marine fungi are an important but often overlooked component of marine ecosystems. Primarily saprotrophic, they are vital to coastal nutrient cycling processes and food webs. However, basic marine fungal distribution data are lacking in many parts of the world, as is knowledge of the sampling intensity required to characterize the biodiversity of these communities. The roles of substrate, season and latitude in shaping intertidal ascomycete community structure were examined for the U.S. Gulf of Mexico, and the role of sampling frequency on species richness estimates was also addressed. Best sampling practices were developed and 750 collections of beach detritus, sand …

Developing Monitoring Methods For Leptasterias Spp. As Sentinel Species In Detecting Local Environmental Changes, Zachary Sturbaum, Kathryn Nuessly, Riley J. Smith, C. Sarah Cohen

STAR Program Research Presentations

Leptasterias spp., a six-rayed sea star, is found in rocky intertidal habitats ranging from Alaska to central California. Leptasterias spp. can be monitored on a broad scale throughout their range by a variety of means using timed counts and random plot censusing in order to detect both large-scale and local-level changes in the environment due to climate change, land-based human activity, or other environmental events. Leptasterias brood their young externally until the embryos grow into fully developed juveniles. These juveniles disperse by crawling away, limiting their dispersal potential. This localized dispersal provides an opportunity to use Leptasterias spp …

Testing The Salinity Tolerance Levels Of Similar Invasive Species Found In The San Francisco Bay, Julia M. Smith, C. Sarah Cohen, Elizabeth Sheets

STAR Program Research Presentations

Testing the salinity tolerance levels of similar invasive species found in the San Francisco Bay

Julia Smith^1,2, Elizabeth Sheets², and C. Sarah Cohen²

¹Department of Teacher Education, California State University, Sacramento ²Department of Biology and Romberg Tiburon Center, San Francisco State University

Three non-indigenous colonial ascidian species, Botrylloides violaceus, Botrylloides diegensis, and Botryllus schlosseri, have become well established in San Francisco Bay. Two species, B. violaceous and B. schlosseri, are globally distributed, and understanding the salinity ranges and tolerances of these successful invaders in their introduced habitats is important for …

Fish Assemblage Dynamics And Red Drum Habitat Selection In Bayou St. John And Associated Urban Waterways Located Within The City Of New Orleans, Louisiana, Patrick W. Smith Mr.

University of New Orleans Theses and Dissertations

Bayou St. John (BSJ) and City Park Lakes and Lagoons (CPLL) are urban waterways in New Orleans, Louisiana. I studied habitat selection of red drum in BSJ, and fish assemblage change in BSJ and CPLL over 40 years. Temperature was found to be the best predictor of red drum habitat selection in Bayou St. John, while salinity and change in depth also were found to be good predictors for certain sites. Potential prey item abundance did not appear to influence habitat selection. Using data from 1971 – 2010, nearshore habitats in CPLL were affected by Hurricane Katrina, but have sense …

Population Size, Habitat Use And Diet Of Kittlitz's Murrelets In Prince William Sound, Alaska, Andrew J. Allyn

Masters Theses 1911 - February 2014

During the summer of 2008 and 2009, we studied the ecology of the Kittlitz’s Murrelet (Brachyramphus brevirostris), a small diving seabird and candidate for the U.S. Endangered Species List, in Prince William Sound (PWS), Alaska. At-sea survey data suggests that the population significantly increased from 2001 to 2009, however there is limited evidence of reproductive success. Habitat use models showed individuals were observed in shallower waters, closer to glaciers, the shoreline, and further from moraines than the available habitat during the daytime. Finer extent sampling from 2008 suggests temperature-depth profiles also influence Kittlitz’s Murrelet daytime habitat use. The …

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …