Aquaculture and Fisheries Commons^™

An Acoustic Monitoring Method For Assessing River Dolphin Presence And Changes In The Context Of Anthropogenic Development, Charles A. Muirhead

Graduate Masters Theses

Populations of river dolphins throughout Asia are in decline as a direct result of intensified anthropogenic activity along river systems. Water development projects, land use change, contamination, and intensified fishing practices are known factors contributing to the probable extinction of the Yangtze river dolphin (Lipotes vexillifer) and declining populations of the South Asian river dolphin (Platanista gangetica spp.), Irrawady dolphin (Orcaella brevirostris), and finless porpoise (Neophocaena a. asiaeorientalis). Although not yet as extensive, river system development in South America is following a similar path as that of Asia, with impacts on dolphin species likely to follow. Currently, the Amazon river …

The Infection Dynamics Of Sea Lice On Atlantic Salmon (Salmo Salar) In Cobscook Bay, Maine, Usa, Catherine Anne Frederick

Electronic Theses and Dissertations

Sea lice (Lepeophtheirus and Caligus spp) are parasitic copepods that infect the external surfaces of fish hosts. Salmon lice (L. salmonis) outbreaks are commonly reported by operations in Canada, Norway, Scotland, Ireland, and the United States and are a primary concern in aquaculture because of their fish health and economic impacts. When farmed fish mortalities and treatments are accounted for, annual losses from sea louse infestations exceed $300,000,000 (Costello 2009). Farms experiencing sea lice infections risk on-site re-infection and transmission to wild populations and other farms that are hydrographically connected. In Maine, Atlantic salmon farms are located in the northeast, …

Comparison Of Methods For Determining Biogeochemical Fluxes From A Restored Oyster Reef, Melanie Jackson, Michael S. Owens, Jeffrey C. Cornwell, M. Lisa Kellogg

VIMS Articles

Oyster reef restoration can significantly increase benthic denitrification rates. Methods applied to measure nutrient fluxes and denitrification from oyster reefs in previous studies include incubations of sediment cores collected adjacent to oyster clumps, benthic chambers filled with intact reef segments that have undergone in situ equilibration and ex situ incubation, and cores with single oysters. However, fluxes of nutrients vary by orders of magnitude among oyster reefs and methods. This study compares two methods of measuring nutrient and metabolic fluxes on restored oyster reefs: incubations including intact segments of oyster reef and incubations containing oyster clumps without underlying sediments. Fluxes …

Simulating Detection-Censored Movement Records For Home Range Analysis Planning, Lyndsie S. Wszola, Victoria L. Simonsen, Lucía Corral, Christopher J. Chizinski, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Home range estimation is an important analytical method in applied spatial ecology, yet best practices for addressing the effects of spatial variation in detection probability on home range estimates remain elusive. We introduce the R package “DiagnoseHR,” simulation tools for assessing how variation in detection probability arising from landscape, animal behavior, and methodological processes affects home range inference. We demonstrate the utility of simulation methods for home range analysis planning by comparing bias arising from three home range estimation methods under multiple detection scenarios. We simulated correlated random walks in three landscapes that varied in detection probability and constructed home …

Legacy Habitat Suitability Of Eastern Oysters (Crassostrea Virginica) In Louisiana: A Prelude To Mississippi River Delta Freshwater Diversions, Tasia Mv Denapolis

University of New Orleans Theses and Dissertations

The Louisiana oyster industry is greatly impacted by freshwater and sediment diversions that are part of the effort to restore the state’s coastline. A habitat suitability index (HSI) proposes species-habitat relationships that can be instrumental in creating impact assessments and suitability predictions for management as new diversions are implemented. An oyster (Crassostrea virginica) HSI was developed using three variables crucial to oyster sustainability: average annual salinity, minimum monthly salinity, and average salinity during the spawning season. These Legacy HSI visualizations show annual fluctuations in the distribution of zones suitable for oyster cultivation prior to proposed diversions in Pontchartrain …

Black Soldier Fly Larvae As Value-Added Feed For Aquaculture In Maine, Joshua Villazana

Electronic Theses and Dissertations

Black soldier flies (BSF), Hermetia illucens (Linnaeus) (Diptera: Stratiomyidae) consume decaying organic waste as larvae (BSFL) and can be used for recycling a variety of biogenic wastes. BSFL can also be processed into value-added animal feeds, including those used in aquaculture. An overarching goal of this project was to obtain additional insights into BSF biology to improve their rearing and handling in future mass-production facilities serving Maine aquaculture.

We tested BSFL growth in the laboratory on seven seafood wastes from Maine fish processing facilities. Substrates potentially suitable for BSFL rearing included finfish trimmings, wet sea cucumber, dry quahog, and sea …

Intensive Oyster Aquaculture Can Reduce Disease Impacts On Sympatric Wild Oysters, Tal Ben-Horin, Colleen Burge, David Bushek, Maya Groner, Dina Proestou, Lauren Huey, Gorka Bidegain, Ryan Carnegie

VIMS Articles

Risks associated with disease spread from fish and shellfish farming have plagued the growth and public perception of aquaculture worldwide. However, by processing nutrients and organic material from the water column, the culture of many suspension-feeding bivalves has been proposed as a novel solution toward mitigating problems facing coastal water quality, including the removal of disease-causing parasites. Here we developed and simulated an epidemiological model describing sympatric oyster Crassostrea virginica populations in aquaculture and the wild impacted by the protozoan parasite Perkinsus marinus. Our model captured the indirect interaction between wild and cultured populations that occurs through sharing water-borne P. …

Gofish: A Versatile Nested Pcr Strategy For Environmental Dna Assays For Marine Vertebrates, Mark Y. Stoeckle, Mithun Das Mishu, Zachary Charlop-Powers

Publications and Research

Here we describe GoFish, a strategy for single-species environmental DNA (eDNA) presence/absence assays using nested PCR. The assays amplify a mitochondrial 12S rDNA segment with vertebrate metabarcoding primers, followed by nested PCR with M13-tailed, species-specific primers. Sanger sequencing confirms positives detected by gel electrophoresis. We first obtained 12S sequences from 77 fish specimens for 36 northwestern Atlantic taxa not well documented in GenBank. Using these and existing 12S records, we designed GoFish assays for 11 bony fish species common in the lower Hudson River estuary and tested seasonal abundance and habitat preference at two sites. Additional assays detected nine cartilaginous …

Checklist Of Zooplanktons In Different Rivers Of Bajwat Area, Zahid Bhatti, Muhammad Asif Gondal, Asad Ghufran, Andleeb Batool

Journal of Bioresource Management

Zooplanktons are important fish and waterfowl food. Limnological studies of Marala Wetlands, a complex created by three rivers, i.e., Jammu Tawi, Chenab and Manawar Tawi, entering Bajwat area located 25 km from North of Sialkot city from state of Jammu and Kashmir, were carried out between October, 2000 to September 2001. This survey was carried out to create a checklist of zooplanktons existing in the study site which would help in future studies relating to aquatic biodiversity and ecological studies of wetlands. A minimum of 25 species of zooplanktons were present in the wetland area, which can be included into …

Optimization Of Light Irradiance During The Early Life Of Sexually-Produced Porites Astreoides And Agaricia Agaricites Recruits, Nicholas J. Mcmahon

HCNSO Student Theses and Dissertations

Current solutions of coral restoration rely mainly on fragmentation. Though a reliable technique, this asexual form of reproduction does not benefit the genetic diversity of the coral reef. With many global and local stressors threatening corals’ existence, the resiliency of corals to future ocean conditions depends highly on sexual reproduction to produce new genotypes. New technology allows coral spawning/larval release, larval settlement and rearing to be carried out in an aquarium system. Many of the techniques necessary to maintain coral recruits are well-established, however the effects of light intensity remain to be studied for these early life stages. Newly …

Leds To Replace Fluorescent Tubes For Growth Of Cultured Algae, Grace Alego, Christopher Bentley, Rebecca Smith, Darian Kelley, Richard Synder

Reports

Fluorescent bulbs are widely used for algal culture stocks and production in aquaculture operations. Metal halide lamps are also used for production tanks with significant electricity demand and heat production. LED technology promises lower operational costs with less energy waste as heat for equivalent light energy production. Re-tooling algal production facilities with new LED fixtures incurs significant expense that must be recaptured in savings over time. The initial cost, added to concerns over the unknown response of algae to LED light sources may both be factors inhibiting incorporation of this new technology. LED replacement tubes are available to retrofit fluorescent …

Landings, Vol. 26, No. 12, Maine Lobstermen’S Community Alliance

Landings: News & Views from Maine's Lobstering Community

Landings content emphasizes science, history, resource sustainability, economic development, and human interest stories related to

Maine’s lobster industry. The newsletter emphasizes lobstering as a traditional, majority-European American lifeway with an economic and social heritage unique to the coast of Maine. The publication focuses how ongoing research to engage in sustainable, non-harmful, and non-wasteful commercial fishing practices benefit both the fishery and Maine's coastal legacy.

Maine Lobstermen’s Community Alliance (MLCA) started publication of Landings, a 24-page newsletter in January 2013 as the successor of the Maine Lobstermen’s Association (MLA) Newsletter. As of 2022, the MLCA published over 6,500 copies of …

Impacts Of A Multi-Trap Line On Benthic Habitat Containing Emergent Epifauna Within The Mid-Atlantic Bight, Cara C. Schweitzer, Rom Lipcius, Bradley G. Stevens

VIMS Articles

Alteration and degradation of benthic structure by fishing gear can impede efforts to manage fish stock sustainably. Although the impacts of mobile gear are well known, effects of passive gear (e.g. fish traps) upon structure have been little studied. We modified commercial traps for American lobster Homarus americanus and black sea bass Centropristis striata by attaching GoPro (R) cameras to ascertain the degree and nature of impacts to seafloor habitats. Customized traps were included within a line of 20 traps, deployed and retrieved according to standard commercial fishing practice. Less than 5% of traps landed directly on bedforms when deployed. …

Assessment Of The Relationship Of Stock And Recruitment In The Atlantic Surfclam Spisula Solidissima In The Northwestern Atlantic Ocean, Jeremy R. Timbs, Eric N. Powell, Roger L. Mann

VIMS Articles

Atlantic surfclams support a major commercial fishery in the western North Atlantic Ocean with landings consistently between 15,000 and 25,000 metric tons since 1982. The stock is not and historically has not been overfished nor has overfishing occurred; however, in recent years landings per unit effort have declined. Surfclams are a biomass dominant on the continental shelf and a bellwether of climate change in the northwestern Atlantic. This study investigated the relationship of broodstock and recruitment during a period when Mid-Atlantic warming initiated a shelf-wide shift in the surfclams range. A species distribution function model was used to assess the …

Growth Characteristics Of Newly Isolated Indonesian Microalgae Under Diferent Salinity, Michael A. Rice, Wa Iba, Gary H. Wikfors, Lucie Maranda

Michael A Rice

Ponds For Peace: A Collaborative Aquaculture Project In Liberia, Joseph Buttner

Joseph Buttner

Freshwater Aquaculture And Its Permitting In Rhode Island: Two Case Studies, Michael A. Rice, Joseph B. Haberek, David Beutel

Michael A Rice

Freshwater Aquaculture And Its Permitting In Rhode Island: Two Case Studies, Michael A. Rice, Joseph B. Haberek, David Beutel

Michael A Rice

Multi-Metric Conservation Assessment For The Imperiled Clinch Dace, Michael James Moore, Donald J. Orth, Eric M. Hallerman

Southeastern Fishes Council Proceedings

Planning frameworks allow managers to spatially prioritize actions to promote species conservation. Traditional aquatic conservation planning frameworks are often organized at the ecological community or ecosystem level, which often neglect imperiled taxa occupying species-poor assemblages. In this study, we develop a multi-metric conservation assessment for the 15 geographically distinct candidate conservation areas (CCAs) occupied by the imperiled Clinch Dace (Chrosomus sp. cf. saylori). Clinch Dace habitat is threatened by anthropogenic landscape alterations, especially for coal mining and timber harvest. Our framework used four metrics to assess the conservation value of each subpopulation of Clinch Dace namely: “habitat …

Transforming Lives In Coastal Communities Through Economic Development: Breeding Crassostrea Virginica For Alternative Oyster Culture, Brian Randall Callam

LSU Doctoral Dissertations

This dissertation helped address the commercialization of triploid Crassostrea virginica production and develop tetraploid C. virginica broodstock in Louisiana by addressing triploid commercialization and tetraploid broodstock development. This was done by: 1) developing regional breeding plans for diploid and tetraploid C. virginica targeted at the Gulf Coastal Region, 2) assessing the effect of chromosome set manipulation on gonadal development in diploid, triploid, and tetraploid C. virginica, 3) quantifying the variation of commercially important hatchery traits in triploid C. virginica larvae from different tetraploid parents, 4) developing an up-to-date remote setting manual for the Gulf Coastal Region for industry use, …

Integrated Use Of Drones And Qr Codes As Complementary Components For Monitoring, Control And Surveillance Systems For Artisanal Fishing Vessels In Peru, Eduardo Israel Zamora Chung

World Maritime University Dissertations

No abstract provided.

Compliance And Enforcement For The Exclusive Economic Zone Fisheries Management In The United Republic Of Tanzania, Christian Alphonce Nzowa

World Maritime University Dissertations

No abstract provided.

Integrate Use Of Drones And Qr Codes As Complementary Components For Monitoring, Control And Surveillance Systems For Artisanal Fishing Vessels In Peru, Eduardo Israel Zamora Chung

World Maritime University Dissertations

This dissertation aims to design a new monitoring, control and surveillance (MCS) component that may be suitable for Peruvian artisanal fishing. When it refers to suitable, it means that it should be low-cost and compatible with other MCS systems to improve the fight against Illegal, Unreported and Unregulated (IUU) fishing. In this regard, through the triangulation among methods including the content analysis as well as interviews and questionnaires to the primary stakeholders of the Peruvian artisanal fishing, it was found that there is a direct connection between a suitable MCS and the fulfilment of the target 14.b of the Sustainable …

Community-Based Organisations As An Approach To Effective Sustainable Artisan Fishing, Mary Mindi Wabit Epse Ngawana

World Maritime University Dissertations

Fishing in Cameroon is one of the main economic activities and lifeline of the coastal communities in the South West Region of Cameroon, especially the artisanal fishing which is mostly traditional and subsistence. Cameroon fisheries are either fully exploited or are already in the critical state of over-exploitation by foreigners and local communities. However, illegal fishing and aggressive fishing practices in the marine environment has led to over exploitation of the fisheries, mangroves and environmental deterioration. There is an urgent need to develop and introduce effective and efficient sustainable approaches, to the exploitation and management of Cameroon’s fisheries and other …

Iuu Fishing: A Gateway To Transnational Crimes In Jamaica, Judy-Ann Icinda Neil

World Maritime University Dissertations

No abstract provided.

Managing Lake Fertility Within The Guidelines Of A Nutrient Management Plan And Based On Algal Nutrient Limitation, Bradley J. Austin, J. Thad Scott, Brian E. Haggard

Technical Reports

The specific objectives were to first, monitor nutrients, algal biomass, and water clarity in lakes Cove, Spring, and Wedington. Second, evaluate whether algal growth in each of the lakes was limited by N, P, or both N and P. This research was conducted to help USFS better manage lake fertilization to maximize algal growth and improve the fisheries within these lakes.

Resource Assessment Report: Temperate Demersal Elasmobranch Resource Of Western Australia, Matias Braccini, Nick Blay, S. A. Hesp, Brett Molony

Fisheries research reports

This document provides a cumulative description and assessment of the Temperate Demersal Elasmobranch Resource (TDER) and all of the fishing activities (i.e. fisheries / fishing sectors) affecting this resource in WA. Future Resource Assessment Reports will assess the State-wide sharks and rays resource.

The report is focused on the temperate indicator species (whiskery, gummy, dusky and sandbar sharks) used to assess the suites of demersal sharks and rays that comprise this resource. These species are primarily captured by demersal gillnets used in the Temperate Demersal Gillnet and Demersal Longline Fisheries (TDGDLF) that operate in the West Coast and South Coast …

Ecosystem Based Fisheries Management (Ebfm) Risk Assessment Of The Western Australian Sea Cucumber Fishery, F J. Webster, Anthony M. Hart

WA Marine Stewardship Council report series

This report provides a comprehensive overview of the commercial Western Australian Sea Cucumber Fishery (SCF) and the outcomes from the 2016 ecological risk assessment for this fishery. Two key species, sandfish (Holothuria scabra) and redfish (Actinopyga echinites), are targeted by the commercial SCF through hand collection by diving and wading primarily in shallow waters of northern WA.

Troubled Waters: Threats And Extinction Risk Of The Sharks, Rays And Chimaeras Of The Arabian Sea And Adjacent Waters, Rima W. Jabado, Peter M. Kyne, Riley A. Pollom, David A. Ebert, Colin A. Simpfendorfer, Gina M. Ralph, Shakha S. Al Dhaheri, K. V. Akhilesh, Khadeeja Ali, Mohamud Hassan Ali

Biological Sciences Faculty Publications

The extinction risk of sharks, rays and chimaeras is higher than that for most other vertebrates due to low intrinsic population growth rates of many species and the fishing intensity they face. The Arabian Sea and adjacent waters border some of the most important chondrichthyan fishing and trading nations globally, yet there has been no previous attempt to assess the conservation status of species occurring here. Using IUCN Red List of Threatened Species Categories and Criteria and their guidelines for application at the regional level, we present the first assessment of extinction risk for 153 species of sharks, rays and …

Landings, Vol. 26, No. 11, Maine Lobstermen’S Community Alliance

Landings: News & Views from Maine's Lobstering Community

Landings content emphasizes science, history, resource sustainability, economic development, and human interest stories related to

Maine’s lobster industry. The newsletter emphasizes lobstering as a traditional, majority-European American lifeway with an economic and social heritage unique to the coast of Maine. The publication focuses how ongoing research to engage in sustainable, non-harmful, and non-wasteful commercial fishing practices benefit both the fishery and Maine's coastal legacy.

Maine Lobstermen’s Community Alliance (MLCA) started publication of Landings, a 24-page newsletter in January 2013 as the successor of the Maine Lobstermen’s Association (MLA) Newsletter. As of 2022, the MLCA published over 6,500 copies of …