Aquaculture and Fisheries Commons^™

The Importance Of Keeping The Big Ones: Harvest Slot Limits And Marine Protected Areas For The Management Of The Caribbean Spiny Lobster, Gayathiri Gnanalingam

Biological Sciences Theses & Dissertations

Fishing typically removes the oldest and/or largest individuals from populations undermining stability and reproductive success. Traditional fisheries management tools fail to protect these oldest and/or largest individuals, but two less conventional tools: marine protected areas (MPAs), and harvest slot limits have the potential to do so. Here I tested the possible use of these tools for the Caribbean spiny lobster, Panulirus argus, an iconic and economically valued species. After decades of intense fishing, the largest lobsters have largely been wiped out. The loss of the largest lobsters is significant as large lobsters have considerably greater reproductive potential than their …

Fishery Interaction Modeling Of Cetacean Bycatch In The California Drift Gillnet Fishery To Inform A Dynamic Ocean Management Tool, Nicholas B. Sisson

Biological Sciences Theses & Dissertations

Understanding the drivers that lead to interaction between target species in a fishery and marine mammals is a critical aspect in efforts to reduce bycatch. In the California drift gillnet fishery static management approaches and gear changes have reduced bycatch but neither measure ascertains the underlying dynamics causing bycatch events. To avoid further potentially drastic measures such as hard caps, dynamic management approaches that consider the scales relevant to physical dynamics, animal movement and human use could be implemented. A key component to this approach is determining the factors that lead to fisheries interactions. Using 25 years (1990-2014) of National …

Lack Of Delayed-Type Hypersensitivity In Striped Bass (Morone Saxatilis), Jessica Shannon Miller

Biological Sciences Theses & Dissertations

Mycobacteriosis is a fatal disease in fishes caused by acid-fast bacteria in the genus Mycobacterium. This disease impacts aquaculture, aquariums, and wild fishes. Unfortunately, there are currently no non-lethal diagnostic tests for mycobacterial infection in fishes. Type IV delayed type hypersensitivity (DTH) responses in vivo and in vitro are currently used for the non-lethal detection of mycobacterial infections in humans and in animals; however, there is little information available on DTH responses in fishes. In this work, we examine in vivo DTH response in Striped Bass (Morone saxatilis), an important U.S. Eastern seaboard fish species, experimentally …

The Effect Of "Casitas" On Lobster Biology And Fishery Sustainability In The Bahamas, Lester George Gittens

Biological Sciences Theses & Dissertations

“Casitas” (artificial table-like structures) are a commercial fishing gear used to harvest Caribbean spiny lobster (Panulirus argus) in the Caribbean and in The Bahamas, where lobster is the most valuable fishery. Yet, casitas are largely unregulated in The Bahamas and they may threaten fishery sustainability through alteration of lobster growth, disease, or mortality rates and due to insufficient information concerning their number and location. Focusing on the lobster fishery in The Bahamas, my objectives were to: (1) investigate the mortality, growth, and susceptibility to disease of lobsters collected in casitas compared to wooden traps and those living in …

Predictors Patterns And Processes Of Extinction Risk In Porgies And Seabreams (Family: Sparidae), Mia Theresa B. Conteros

Biological Sciences Theses & Dissertations

A variety of human-induced changes are having profound impacts on the marine environment, and no area on the planet remains unaffected by the detrimental effects of our activities. These stressors can potentially lead to synergistic effects, causing accelerated biodiversity loss and diminished ecosystem functioning. Identification and understanding of the factors that drive species to heightened risk of extinction are important goals in conservation.

The Sparidae are commercially important and ecologically complex marine fishes; global extinction risk assessments using the IUCN Red List of Threatened Species methodology show that 9% (13 species) have increased vulnerability to population declines from intense fishing …

Comparative Phylogeography Of The Emperor Snappers Lethrinus Lentjan And Lethrinus Harak (Lethrinidae: Percoidei) In The Coral Triangle, Andrew B. Hines

Biological Sciences Theses & Dissertations

Many questions remain regarding the origins of the well-known peak in marine biodiversity found in the Coral Triangle. Barriers to gene flow may promote lineage diversification and provide the potential for speciation contributing to the high biodiversity in this area. Population structure was examined in two species of Emperor Snappers (Lethrinidae), Lethrinus harak and Lethrinus lentjan. These species were selected because they share similar life-history traits and geographic distributions, but differ in their habitat preferences. Specimens were collected from within the Coral Triangle as well as other localities across the Indo-Pacific. To investigate phylogeographic patterns and structure a hypervariable …

Molecular Phylogenetics Of Perciform Fishes Using The Nuclear Recombination Activating Gene 1, Andrew R. Mahon

Biological Sciences Theses & Dissertations

The order Perciformes contains one-third of all extant fishes in twenty different suborders and over 10,000 species. Few systematic investigations have been performed on this large group of fishes at the suborder level and their evolutionary history is widely recognized as problematic. This dissertation presents three studies: a molecular phylogenetic analysis of the putative suborders of the order Perciformes, an analysis of interrelationships of the families of the perciform suborder Percoidei, and a multi-gene investigation of the percoid superfamily Sparoidea.

The taxa sampled in this dissertation represent one of the most inclusive molecular datasets, to date, testing the monophyly of …

The Ecological Ramifications Of Disease And Density In The Caribbean Spiny Lobster, Panulirus Argus, Donald C. Behringer Jr.

Biological Sciences Theses & Dissertations

In 1999, I discovered the first virus known to be pathogenic to any species of lobster. HLV-PA is a pathogenic herpes-like virus that infects juvenile Caribbean spiny lobster, Panulirus argus, in the waters off south Florida (USA), and it alters the behavior and ecology of this species in fundamental ways. Gross signs of HLV-PA infection are lethargy, morbidity, cessation of molting, and discolored, “milky” hemolymph that does not clot. HLV-PA infects the hemocytes of host lobsters, specifically the hyalinocytes and semi-granulocytes, but not the granulocytes. When hemolymph from infected donors was injected into healthy juvenile lobsters, 90% of the …

Male Reproductive Dynamics In The Caribbean Spiny Lobster Panulirus Argus, Jamie S. Heisig

Biological Sciences Theses & Dissertations

The population size structure of the Caribbean Spiny Lobster, Panulirus argus, in the Florida Keys, Florida (USA) has undergone a dramatic shift as a result of fishing pressure on the large individuals of the population. Male lobsters are affected most by fishing because of sexual dimorphism in size and other studies have shown that male size has direct impacts on reproductive output (i.e., number of fertilized eggs/clutch) that are independent of female size. To assess more precisely the impact of male size on fertilization success, I conducted laboratory experiments and field observations to examine various male reproductive attributes over …

Vertical Distributions Of Zooplankton At The Mouth Of Chesapeake Bay And Calibration Of Backscatter From An Acoustic Doppler Current Profiler, Arthur Keith Jenkins

Biological Sciences Theses & Dissertations

This study investigated the physical factors influencing the vertical distribution of zooplankton at the mouth of the Chesapeake Bay and attempted to derive biological data from acoustic Doppler current profiler (ADCP) backscatter. A single site was occupied in the North Channel at the mouth of Chesapeake Bay (37° 04' N, 75° 58' W) from 17.0–19.7 November 1999. Temperature, salinity, fluorescence, light transmission, current velocity and backscatter were measured throughout the sampling period. Plankton samples were collected every hour from 3.5, 7.5, and 11.5 m.

We found little association between ADCP backscatter and plankton concentrations, but stronger correlations between backscatter and …

Development Of An Electrotransformation Technique For Streptococcus Iniae And Preliminary Characterization Of The Hemolysin Associated With This Bacterium, Kimberly Ann Hahn

Biological Sciences Theses & Dissertations

Streptococcus iniae is a gram-positive organism responsible for causing disease in both freshwater as well as saltwater fish. Every year fisheries lose fish by the tons due to diseases caused by this organism. In 1991, the first reported human case of disease associated with this organism was described. Since this initial case, there have been numerous other reported cases of S. iniae infections. This organism is a catalase negative, facultatively anaerobic organism that produces a capsule and when plated onto blood agar demonstrates β-hemolytic activity.

In this study, the relationship between the hemolysin produced by S. iniae and the lactate …

In Support Of A Rationally Managed Fishery: Age And Growth In Patagonian Toothfish (Dissostichus Eleginoides), Julian R. Ashford

Biological Sciences Theses & Dissertations

Patagonian toothfish (Dissostichus eleginoides) occur on the continental shelves and shelf breaks of southern South America and the Southern Ocean. Stock structure, critical to good fisheries management, can be inferred from growth differences between areas, but available growth data are compromised by inconsistencies in age estimation methods, sampling and sample sizes, and techniques used to derive estimates. I asked the scientific question: how is growth in Patagonian toothfish structured spatially within the Southern Ocean? I developed a multi-stage randomized design to sample fish caught by commercial longline, and an age estimation methodology. Because toothfish are difficult to age, …

Biological And Physical Observations On Larval Spot (Leiostomus Xanthurus) Recruiting To Oregon And Ocracoke Inlets North Carolina, Thomas R. Wasaff

Biological Sciences Theses & Dissertations

Patterns of abundance, length, age, and growth of larval spot (Leiostomus xanthurus) were compared to assess the variability between spot larvae ingressing to two North Carolina inlets. The source of variability for the recruitment of larval fishes to estuarine nurseries has been linked to environmental stochasticity. Wind data and seasurface temperature satellite images were analyzed as two influential environmental variables that may help explain recruitment variability. As part of the South Atlantic Bight Recruitment Experiment (SABRE), spot larvae were collected between October 1994 and April 1995 as they recruited to Pamlico Sound through Oregon Inlet, located north of Cape Hatteras, …

Evaluation Of Fish Scale Chemistry For Determining Habitat Associations, Brian Kenneth Wells

Biological Sciences Theses & Dissertations

This is the first work examining the utility of scale chemistry for determining natal origins and habitat associations. I quantified a relationship of scale chemistry to water chemistry, quantified geographic variation in scale chemistry, and evaluated stability of scale chemistry through maturation. Scale chemistry accurately reflected trace element composition of the water in which fish had lived. Juvenile spot (Leiostomus xanthurus) were held in four concentrations of Sr, Cd, and Ba maintained at either 20°C or 25°C, for 42 days. Strontium:Ca, Cd:Ca, and Ba:Ca levels in scales were linearly related to environmental concentrations while temperature had no effect. …

Growth And Yield-Per-Recruit Modeling Of Spot (Leiostomus Xanthurus) In The Chesapeake Bay, And A Comparison Of Biological Reference Points, Kevin Ray Piner

Biological Sciences Theses & Dissertations

Spot were sampled from the Chesapeake Bay commercial fishery from 1993–1995 to determine if spot are overfished. Transversely sectioned otoliths were determined to be the most appropriate structure for ageing spot. It was determined that spot have a high natural mortality rate (M = 0.9) and fast growth (K = 0.6). This combination of M and K makes spot relatively impervious to growth overfishing as determined by yield-per-recruit modeling. Because spot are nearly impervious to growth overfishing, management thresholds based on yield-per-recruit modeling may be inappropriate. In addition, the combination of high M and fast K makes it possible to …

Effect Of Sampling Errors On Estimates Of Recruitment And Fishing Mortality From Separable Virtual Population Analysis, Emmanis Dorval

Biological Sciences Theses & Dissertations

Separable virtual population analysis (SVPA) models provide estimates of historical recruitment and fishing mortality from analyzing catch data based on the separability of fishing mortality into age specific-gear selection and yearly mortality. These models assume that the catch is randomly sampled and that sampling error is a random variable with constant variance and mean equal to zero. These models do not account for sampling measurement errors that occur when the catch partitioned by age is not measured on every sampling unit without error, and spatio-temporal errors that occur when the observed catch is not representative of the harvested population throughout …

Reproductive Biology Of Chesapeake Bay Black Drum, Pogonias Cromis, With An Assessment Of Fixatives And Stains For Histological Examination Of Teleost Ovaries, Brian K. Wells

Biological Sciences Theses & Dissertations

Based on three years of data collection on the periodicity of the spawning run, the gonadosomatic index (GSI), and gonad histology, the spawning season for Chesapeake Bay black drum was found to be significantly shorter and later compared to populations from Florida and the Gulf of Mexico. The GSI is maximal in early April when black drum first enter the Chesapeake Bay region in contrast to data from Florida where GSI peaks during February and March. I confirm that black drum from the Chesapeake Bay are batch spawners. These results match those found for populations of black drum in the …

Computer Simulation Techniques To Assess Bias And Precision In The Roving Creel Survey Estimator, David L. Wade

Biological Sciences Theses & Dissertations

Fisheries scientists use roving creel survey methods to estimate total catch and total effort of recreational fisheries. Bias in the roving creel estimators had been known to the scientific community, but it had not been quantified. I developed a roving-creel-survey computer simulation model to investigate the bias and precision of roving creel estimators, and estimated parameters for the model based on field observations from the blue crab (Callinectes sapidus) fishery of the Chesapeake Bay. The computer model was used to identify bias in roving-creel effort and catch estimators and to demonstrate survey methods that will reduce this bias. …

Age Growth And Reproduction Of Black Drum, Pogonias Cromis, In Virginia, Stephen J. Bobko

Biological Sciences Theses & Dissertations

The black drum, Pogonias cromis, is of great economic importance to the communities of the lower Eastern Shore of Virginia. Fish are sought both commercially and recreationally during their yearly spring spawning run. Although the number of fish caught each year does not rival other exploited species, it is a directed fishery that partially supports many local fishermen, seafood distributors, marinas, motel owners, and restauranteurs.

Black drum were collected during the fall of 1989 and the spring of 1990 to investigate the population dynamics of fish found in Virginia's Chesapeake Bay and surrounding coastal waters. A total of 235 fish …

A Review Of The Pacific Members Of The Gobiid Fish Genus Bollmannia Jordan, Robin L. Bedenbaugh

Biological Sciences Theses & Dissertations

The Pacific members of the genus Bollmannia Jordan 1890 comprise seven species of gobies distributed from Baja California to Peru and west to the Galapagos Archipelago.

Previous authors recognized nine nominal species, all known only from their brief original accounts. Those accounts do not allow for proper discrimination of the species. All nominal species were re­ examined using meristic, morphometric, and pigment-pattern characteristics. Three of the nine nominal species are herein considered synonymous with previously described forms. The six valid nominal species are redescribed, a new species is described, and a key and illustrations are provided for the seven valid …

Age And Growth Of The Tautog, Tautoga Onitis (Pisces: Labridae), From Lower Chesapeake Bay And Coastal Waters Of Virginia, E. Brian Hostetter

Biological Sciences Theses & Dissertations

The tautog, Tautoga onitis (Pisces: Labridae), is rapidly gaining popularity in Virginia by anglers, spearfishermen and specialized commercial interests. In Virginia, tautog are seasonally abundant on hard bottom substrates in nearshore (ca. 2-10 m) habitats and inhabit offshore wrecks and reef areas (ca. 10-30 m) year round. Habitat restriction and slow growth of the species coupled with recent technological advances in marine electronics which simplify locating tautog populations by user groups may contribute to overexploitation of tautog within the region.

Tautog were collected over a two year period from the lower Chesapeake Bay and nearshore waters of the Atlantic Ocean …

The Seasonality Of Occurrence Of Larval And Juvenile Sciaenids In A Virginia Seaside Estuary, James Howard Cowan Jr.

Biological Sciences Theses & Dissertations

The seasonality of occurrence and relative abundance of larval and juvenile fishes, particularly members of the family Sciaenidae, from a Virginia seaside estuary were determined from ichthyoplankton and trawl collections made from March 1979 to March 1980.

The larvae of 20 species distributed among 15 families were identified from the ichthyoplankton. Larvae of the bay anchovy, Anchoa mitchilli, and the Atlantic silverside, Menidia menidia, dominated the samples and made up 57 and 34%, respectively, of all larvae collected. Peak occurrence began in May and continued through August. Fish larvae were present in the study area all year.

Twenty-eight …

The Feasibility Of Commercial Scale Culture Of Atlantic Sturgeon, Acipenser Oxyrhynchus, Christopher John Coffing

Biological Sciences Theses & Dissertations

Abstract unavailable.

Osteology Of Trypauchenichthys Sumatrensis Hardenburg, Christine Parrish Baer

Biological Sciences Theses & Dissertations

The osteology of a Malaysian goby was examined in detail and compared to other gobioids. Results indicated that Trypauaheniahthys sumatrensis is a specialized, but definite member of the Gobioidei. Some osteological characteristics of a related fish, Trypauchen vagina, were also discussed.