Aquaculture and Fisheries Commons^™

The Impacts Of A Quagga And Zebra Mussel Infestation, Casey Silva

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Invasive species issues have been on the rise in the United States for decades. These organisms can disrupt the natural flow of an ecosystem and overtake native species, altering an environment as a whole. The introduction of the zebra mussel (Dreissena polymorpha) in 1988, followed by the quagga mussel (Dreissena rostriformis) in 1989 is arguably the most prolific aquatic infestation the nation is currently up against (Hoddle, 2022). Beginning in the Great Lakes, both quagga and zebra mussels quickly spread their infestations through the Midwest and the East coast. The potential invasion of these species across …

A Call For Ethical And Responsible Treatment Of Invasive Species By Recreational Anglers, Kevin A. Adeli

Human–Wildlife Interactions

Invasive species pose a prominent threat to global biodiversity, with aquatic ecosystems being particularly susceptible. In an effort to limit the spread of aquatic invasive species, numerous public awareness programs have been launched, and several regions have enacted “must-kill” angling regulations, which prohibit the live release of invasive fish species when captured. Many education programs, however, demonize invasive species and lack any instruction for humane euthanasia. This unbalanced approach has translated into widespread mistreatment of invasive species among recreational anglers. This piece addresses these concerns by discussing their significance and providing recommendations for how education programs can adopt a more …

Universal Healthcare: Is It The Future?, Izzy Wappett

Fall Student Research Symposium 2021

About 8.5% of the United States population has no form of healthcare. The rest of the population either has a form of public or private insurance given to them by the government, private insurers, or employers. But there are countries worldwide that have systems where every citizen has healthcare. This is called universal healthcare. Universal Healthcare has shown to be more effective because it portrays healthcare as less of a privilege and more of a right to all. But many Americans view this kind of system as controlling and a system that takes away your freedom. But as studies and …

Investigating The Primary Production Of Bear Lake's Filamentous Algal Blooms, Maycee Page

Student Research Symposium

Filamentous algae blooms(FABs) have been appearing on the Western Shore of Bear Lake within the last couple of years with minimal research done on them. Through YSI meter sampling of light and dark trials of Bear Lake’s Eastern and Western shores and Fluorometer analysis of samples of filamentous algae taken from each site, gross primary production(GPP), net ecosystem production(NEP), and community respiration were calculated. Through graphical analysis between many of the factors that were accounted for, one statistical significance found was between the mass in milligrams of periphyton produced and the gross primary production. The two have a negative correlation …

Evaluating The Effect Of The Removal Of Non-Native Trout In Two High Elevation Tributary Streams In The Intermountain West, Clint Brunson

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Native fish species such as Bonneville Cutthroat Trout (BCT) require cold, clear, well-connected streams for spawning and rearing as well as access to complimentary habitats. Increasing river temperatures and lower water flows may have allowed non-native Brown Trout (BNT) to migrate into higher elevation pristine streams. Additionally, anthropogenic actions such as stocking non-native Brown and Brook (BKT) and Rainbow Trout (RBT) for angling opportunities impact BCT. Invasion of these tributaries by non-native species may reduce or eliminate cutthroat trout by predation, competition, displacement, genetic suppression, and exclusion. A seven-fold increase in BNT numbers of 50 to 350 from 2017 to …

Utah Land Management Evaluation And Assessment Network Needs Assessment, Jordan Smith

All Current Publications

It can be difficult to make and implement land management decisions that are informed by the best available science, satisfy different stakeholders, and are compliant with established policies and regulations. Local, state, and federal entities with the capacity to influence land management decisions, can benefit from an understanding of the shared needs of landowners and managers. This needs assessment reports on the shared information, funding, and research needs expressed by land managers and owners throughout Utah who make decisions about: (1) fire prevention and suppression; (2) livestock grazing; (3) fisheries; or (4) wildlife. The report provides a high-level assessment of …

Challenges In Columbia River Fisheries Conservation: A Response To Duda Et Al., Brian K. Hand, Courtney G. Flint, Chris A. Frissell, Clint C. Muhlfeld, Shawn P. Devlin, Brian P. Kennedy, Robert L. Crabtree, W. Arthur Mckee, Gordon Luikart, Jack A. Stanford

Sociology, Social Work and Anthropology Faculty Publications

The salmonid fisheries of the Columbia River Basin (CRB) have enormous socioeconomic, cultural, and ecological importance to numerous diverse stakeholders (eg state, federal, tribal, nonprofit), and there are a wide array of opinions and perspectives on how these fisheries should be managed. Although we appreciate Duda et al.'s commentary, it offers only one perspective of many in this context. The objective of our paper (Hand et al. 2018) was to provide justification for “the importance of social–ecological perspectives when communicating conservation values and goals, and the role of independent science in guiding management policy and practice for …

Estimating Waterbird Abundance On Catfish Aquaculture Ponds Using An Unmanned Aerial System, Paul C. Burr, Sathishkumar Samiappan, Lee A. Hathcock, Robert J. Moorhead, Brian S. Dorr

Human–Wildlife Interactions

In this study, we examined the use of an unmanned aerial system (UAS) to monitor fish-eating birds on catfish (Ictalurus spp.) aquaculture facilities in Mississippi, USA. We tested 2 automated computer algorithms to identify bird species using mosaicked imagery taken from a UAS platform. One algorithm identified birds based on color alone (color segmentation), and the other algorithm used shape recognition (template matching), and the results of each algorithm were compared directly to manual counts of the same imagery. We captured digital imagery of great egrets (Ardea alba), great blue herons (A. herodias), …

Expanding Instream Flows To Protect Ecosystems In Overallocated River Basins, Belize A. Lane, David E. Rosenberg

Reports

Utahns are expressing a rapidly growing interest in protecting and enhancing instream flows for outdoor recreation and environmental benefits (Endter-Wada et al. 2015). However, many Utah rivers are already over-allocated for agricultural, municipal, hydropower and other water uses, making it difficult to procure additional water for instream flows. ‘Use it or lose it’ western water law and mentality encourages Utahns to use water rather than return it to rivers and ecosystems.

This briefing reviews existing instream flow practices allowed by the Utah water rights system and the challenges to implementation. We suggest key technical and legislative opportunities within and outside …

Using Systematic Conservation Planning To Establish Management Priorities For Freshwater Salmon Conservation, Matanuska-Susitna Basin, Ak, Usa, Andrew W. Witt, Edd Hammill

Ecology Center Publications

1- The Alaskan Matanuska-Susitna Basin (MSB) provides habitat for all five Pacific salmon species, and their large seasonal spawning runs are important both ecologically and economically. However, the encroachment of human development through urbanization and extractive industries poses a serious risk to salmon habitat in the MSB.

2- Using systematic conservation planning techniques, different methods of incorporating anthropogenic risks were assessed to determine how to cost-effectively conserve salmon habitat in the area.

3- The consequences of four distinct conservation scenarios were quantified: no consideration of either urbanization or extractive industries (‘Risk ignored’ scenario); accounting for the risk of urbanization, and …

Age-Specific Estimates Indicate Potential Deleterious Capture Effects And Low Survival Of Stocked Juvenile Colorado Pikeminnow (Ptychocheilus Lucius), Scott R. Clark, Mary M. Conner, Scott L. Durst, Nathan R. Franssen

Wildland Resources Faculty Publications

Hatcheries and stocking programs have become necessary to repatriate or augment populations of imperiled fishes worldwide. Over nearly two decades, millions of endangered juvenile Colorado Pikeminnow Ptychocheilus lucius have been stocked into the San Juan River (Colorado, New Mexico, and Utah); however, recruitment of these individuals to adult life stages (age ≥6) remains low. Using a mark–recapture data set collected from annual riverwide electrofishing efforts between 2003 and 2016, we investigated apparent survival and capture probabilities of stocked Colorado Pikeminnow to identify age‐specific bottlenecks contributing to this lack of recruitment. With relatively high capture rates, which averaged between 0.34 and …

The Relationship Between Measures Of Annual Livestock Disturbance In Western Riparian Areas And Stream Conditions Important To Trout, Salmon, And Char, Lindsey M. Goss, Brett B. Roper

Watershed Sciences Faculty Publications

Managing livestock disturbance in riparian zones in a manner that provides economic returns to ranchers while protecting streams is an important aspect of rangeland management on public lands in the western United States. Attempts to balance economic and ecologic outcomes have been made more difficult due to the presence of several salmonid species that are protected under the Endangered Species Act. One approach to proper management of livestock use near streams has been to define the allowable limits of disturbance using 2 metrics, streambank alteration and stubble height. We evaluated 153 stream reaches within the Interior Columbia Basin to determine …

A Comparison Of Five Statistical Methods For Predicting Stream Temperature Across Stream Networks, Maike F. Holthuijzen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The health of freshwater aquatic systems, particularly stream networks, is mainly influenced by water temperature, which controls biological processes and influences species distributions and aquatic biodiversity. Thermal regimes of rivers are likely to change in the future, due to climate change and other anthropogenic impacts, and our ability to predict stream temperatures will be critical in understanding distribution shifts of aquatic biota. Spatial statistical network models take into account spatial relationships but have drawbacks, including high computation times and data pre-processing requirements. Machine learning techniques and generalized additive models (GAM) are promising alternatives to the SSN model. Two machine learning …

Body Condition Of Endangered Humpback Chub In Relation To Temperature And Discharge In The Lower Colorado River, Forest P. Hayes, Michael J. Dodrill, Brandon S. Gerig, Colton Finch, William E. Pine Iii

Watershed Sciences Faculty Publications

Determining the population status of endangered Humpback Chub Gila cypha is a major component of the adaptive management program designed to inform operation of Glen Canyon Dam upstream from Grand Canyon, Arizona. In recent decades, resource managers have identified a portfolio of management actions (with intermittent implementation) to promote population recovery of Humpback Chub, including nonnative fish removal, changes in water release volumes and discharge ramping schedules, and reductions in hydropower peaking operations. The Humpback Chub population in Grand Canyon has increased over this same period, causal factors for which are unclear. We took advantage of unusual hydrology in the …

Growth Of Endangered Humpback Chub In Relation To Temperature And Discharge In The Lower Colorado River, W. E. Pine Iii, K. Limburg, B. Gerig, Colton Finch, D. Chagaris, L. Coggins, D. Speas, D. A. Hendrickson

Watershed Sciences Faculty Publications

Assessments of growth can provide information needed to understand how fish populations respond to changing environmental conditions and management actions, including ecosystem experimentation. We estimated growth rates and parameter uncertainty from otoliths of endangered Humpback Chub Gila cypha from the Colorado River in Grand Canyon, Arizona. We then compared growth of Humpback Chub , age 2 that were 1) occupying the mainstem Colorado River during a period of variable discharge and cooler water temperatures (1980–1998; epoch 1), 2) occupying the Colorado River during a period of moderate discharge variability and warmer water (2001–2011; epoch 2), and 3) occupying the unregulated …

Characterizing Growth And Condition Of Endangered Humpback Chub In The Lower Colorado River, William E. Pine Iii, Brandon S. Gerig, Colton Finch

Watershed Sciences Faculty Publications

This paper is a preface to the two papers that follow in this issue. The two papers (by Pine et al. and Hayes et al.) use long-term fish sampling data from ongoing Humpback Chub monitoring efforts and archival otolith samples (from museums) collected in the lower Colorado and Little Colorado Rivers during periods of both cold- and warm-water conditions to assess whether Humpback Chub growth characteristics may have responded to changes in water temperature. Growth patterns are often of interest to resource managers because growth integrates a large range of environmental and ecological factors, including habitat conditions. Together, these papers …

From Disaster To Sustainability: The Story Of The Pacific Groundfish, Matthew Richards

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

This paper reviews the circumstances that led to the collapse of the Pacific groundfish fishery and the steps that fishery managers took to curb over-harvesting and bring the fishery back to sustainability. Fishery managers utilized various management tools such as a vessel buyback program, regulatory mechanisms, and market strategies to improve the available data on the fishery, improve safety for fishermen, and reduce harvest rates and overcapitalization. By employing a diverse range of measures, managers developed a system by with they successfully balanced conservation objectives and minimized adverse impacts to fishing communities. Overcapitalization and overharvest continue to degrade the health …

Evaluating Habitat-Based Niche Requirements And Potential Recruitment Bottlenecks For Imperiled Bluehead Sucker (Catostomus Discobolus), Bryan C. Maloney

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Changes to rivers that alter physical and thermal habitat may cause fish population abundance to decline, due to fewer individuals maturing and entering the adult population. The Weber River has become highly degraded with many dams and diversions altering fish habitat, river volume, velocity, and temperature, and limiting movement between reaches. Bluehead suckers (Catostomus discobolus) occupy only 47% of their historical range and the genetically-distinct Weber River (northern UT) population is declining and contains few young, juvenile fish. My objectives were to determine whether spawning and rearing habitat available in the Weber River may be limiting bluehead sucker …

Comparison Of Burbot Populations Across Adjacent Native And Introduced Ranges, Annika W. Walters, Elizabeth G. Madenville, W. Carl Saunders, Paul C. Gerrity, Joseph A. Skorupski, Zack E. Underwood, Eric I. Gardunio

Watershed Sciences Faculty Publications

Introduced species are a threat to biodiversity. Burbot, Lota lota, a fish native to the Wind River Drainage, Wyoming and a species of conservation concern, have been introduced into the nearby Green River Drainage, Wyoming, where they are having negative effects on native fish species. We compared these native and introduced burbot populations to evaluate potential mechanisms that could be leading to introduction success. We examined genetic ancestry, physical habitat characteristics, community composition, and burbot abundance, relative weight, and size structure between the native and introduced range to elucidate potential differences. The origin of introduced burbot in Flaming Gorge …

A Lota Lota Consumption: Trophic Dynamics Of Non-Native Burbot In A Valuable Sport Fishery, Stephen L. Klobucar, W. Carl Saunders, Phaedra Budy

Watershed Sciences Student Research

Unintentional and illegal introductions of species disrupt food webs and threaten the success of managed sport fisheries. Although many populations of Burbot Lota lota are declining in the species’ native range, a nonnative population recently expanded into Flaming Gorge Reservoir (FGR), Wyoming–Utah, and threatens to disrupt predator–prey interactions within this popular sport fishery. To determine potential impacts on sport fishes, especially trophy Lake Trout Salvelinus namaycush, we assessed the relative abundance of Burbot and quantified the potential trophic or food web impacts of this population by using diet, stable isotope, and bioenergetic analyses. We did not detect a significant …

Interdisciplinary Modeling For Water-Related Issues Graduate Course, Laurel Saito, Alexander Fernald, Timothy Link

All ECSTATIC Materials

The science and management of aquatic ecosystems is inherently interdisciplinary, with issues associated with hydrology, atmospheric science, water quality, geochemistry, sociology, economics, environmental science, and ecology. Addressing water resources issues in any one discipline invariably involves effects that concern other disciplines, and attempts to address one issue often have consequences that exacerbate existing issues or concerns, or create new ones (Jørgensen et al. 1992; Lackey et al. 1975; Straskraba 1994) due to the strongly interactive nature of key processes (Christensen et al. 1996). Thus, research and management of aquatic ecosystems must be interdisciplinary to be most effective, but such truly …

Schooling Increases Risk Exposure For Fish Navigating Past Artificial Barriers, Bertrand H. Lemasson, James W. Haefner, Mark D. Bowen

Biology Faculty Publications

Artificial barriers have become ubiquitous features in freshwater ecosystems and they can significantly impact a region's biodiversity. Assessing the risk faced by fish forced to navigate their way around artificial barriers is largely based on assays of individual swimming behavior. However, social interactions can significantly influence fish movement patterns and alter their risk exposure. Using an experimental flume, we assessed the effects of social interactions on the amount of time required for juvenile palmetto bass (Morone chrysops × M. saxatilis) to navigate downstream past an artificial barrier. Fish were released either individually or in groups into the flume …

Colorado River Cutthroat Trout Habitat Resistance And Resilience To Climate Change, Kate H. Olsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Government agencies and private organizations spend large amounts of public money attempting to return ecosystems to a more natural state, which have often been harmed or even destroyed as a result of modern development. Colorado River cutthroat trout, Oncorhyncus clarki pleuriticus, are a subspecies of cutthroat trout. Cutthroat trout live in the Rocky Mountains of the western United States. The population of this particular subspecies has been severely reduced by human actions, and currently only 12% of its historic populations still exist. To improve the condition of cutthroat trout, fisheries professionals and biologists are working to restore natural populations. …

Comparison Of Topographic Surveying Techniques In Streams, Sara G. Bangen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Bonneville Power Administration (BPA) Fish and Wildlife Program (FWP) mitigates impacts, including mortality, from hydroelectric dams in the Columbia River Basin for ESA-listed salmon and steelhead populations and other species of special concern. Given the extensive economic resources invested in mitigation and the incredible diversity of in-stream habitat across the Columbia River basin, questions have arisen about which sampling strategies are most tractable across the entire Columbia River Watershed, but also produce datasets that allow researchers to answer meaningful questions about salmonid populations and trends in habitat. In response to these issues, the NOAA Integrated Status and Effectiveness Monitoring …

A Study Of The Spawning Ecology And Early Life History Survival Of Bonneville Cutthroat Trout, Phaedra E. Budy, Sarah Wood, Brett B. Roper

Watershed Sciences Faculty Publications

We completed a large-scale field experiment in four tributaries of the Logan River, Utah, where the largest metapopulation of imperiled Bonneville cutthroat trout Oncorhynchus clarkii utah persists. We documented the spatial and temporal distributions of spawners, quantified substrate use versus substrate availability, and evaluated differences in hatch and emergence fry success between and among sites in relation to habitat characteristics. We observed considerable variability in the timing, magnitude, and duration of spawning among study areas (streams), in part as a function of a variable, multipeaked hydrograph. Nevertheless, across study areas, >70% of redds were constructed on the final descending limb …

Genetic Status Of Isolated Populations Of Colorado River Cutthroat Trout (Oncorhynchus Clarkii Pleuriticus) In The North Fork Little Snake River Drainage, Wyoming, Rachel Van Horne

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Over the last century native cutthroat trout populations have declined in the western United States. Habitat fragmentation is one of the main causes for this decline. Human actions such as the construction of roads, weirs, dams, and water diversions intersect streams and prevent the natural movement of fish. In many cases native cutthroat trout are now confined to headwater streams above human-created barriers. These barriers not only fragment the populations but also increase the risk of individual population extinction.

This study established a baseline genetic structure for nine isolated populations of Colorado River cutthroat trout in the North Fork Little …

Mercury In The Pelagic And Benthic Food Webs Of The Great Salt Lake, Wayne A. Wurtsbaugh, Erin Fleming, Caleb Izdepski, Jodi Gardberg

Watershed Sciences Faculty Publications

No abstract provided.

Mercury And Selenium Bioaccumulation In The Stromatolite Community Of The Great Salt Lake, Utah, Usa, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

No abstract provided.

Lakes As Buffers Of Stream Dissolved Organic Matter (Dom) Variability: Temporal Patterns Of Dom Characteristics In Mountain Stream-Lake Systems, K. J. Goodman, Michelle A. Baker, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

Lakes within fluvial networks may affect dissolved organic matter (DOM) dynamics in streams by dampening spring DOM snowmelt flushing responses and/or by increasing summer DOM production. We assessed the temporal variability of dissolved organic carbon (DOC) concentration and DOM characteristics (specific ultraviolet absorbance (SUVA254); DOC:dissolved organic nitrogen (DOC:DON)), as well as DOC export in seven paired lake inflows and outflows in the Sawtooth Mountain lake district, Idaho. We hypothesized that lakes would decrease stream DOM temporal variability and increase DOM export as a result of autotrophic production. We correlated DOM variability with landscape factors to evaluate potential drivers of DOM …

Assessing Linkages Among Landscape Characteristics, Stream Habitat, And Macroinvertebrate Communities In The Idaho Batholith Ecoregion, Andrew C. Hill

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Understanding the composition of lotic communities and the landscape processes and habitat characteristics that shape them is one of the main challenges confronting stream ecologists. In order to better understand the linkages among landscape processes, stream habitat, and biological communities and to understand how accurately our measurements represent important factors influencing biological communities, it is important to test explicit hypotheses regarding these linkages. Increasing our understanding of aquatic communities in a hierarchical context and recognizing how well our measurements represent factors structuring aquatic communities will help managers better evaluate the influence of land management practices on aquatic ecosystems, direct conservation …