Life Sciences Commons^™

The Subject Librarian Newsletter, Biology, Spring 2017, Sandy Avila

Libraries' Newsletters

No abstract provided.

Climate Change And The Evolution Of Insect Immune Function, Danae Perry

Electronic Theses and Dissertations

Insects are ectothermic organisms that have physiological, behavioral and life-history traits directly influenced by their environment. Investigations have shown that many insects use melanin to permanently darken their cuticles in cooler or drier climates to improve thermoregulation and desiccation resistance. Melanin is a major component of pathogen defense in insects. This suggests that environmentally driven adaptive changes in cuticular melanin may non-adaptively shape insect immune function. This hypothesis has been referred to as climate-related Cuticle Dependent Immune Investment (climate-related CDII). Climate-related CDII also suggests that a warming climate could lead to the evolution of a weakened melanin-based immune response due …

Advanced Castes At The Outset Of Eusociality In Wasps (Vespidae), Patrick Piekarski

Electronic Theses and Dissertations

A dominating and widespread view is that evolutionary change is gradual and waits upon mutation. Likewise, it is thought that workers and queens of eusocial insects diverged gradually and stepwise. That is, rudimentary castes preceded advanced castes. This paradigm hinges on eusociality having evolved once in Vespidae, and primitively eusocial paper wasps lacking ontogenetic caste biasing (differentiation of castes during larval development). Using a phylogenomic approach this study shows strong evidence for two origins of eusociality in vespid wasps, wherein one origin is likely characterized by the sudden appearance of castes with physiological, and perhaps even morphological, differences established before …

Plasticity Of Central And Peripheral Nervous System: Effects Of Oxygen-Glucose Deprivation (Ogd) And Chronic Intermittent Hypoxia (Cih), Jin Chen

Electronic Theses and Dissertations

Transient receptor potential canonical 6 (TRPC6) channels are permeable to Na+ and Ca2+ and are widely expressed in the brain. In this study, we investigated the role of TRPC6 following ischemia/reperfusion (I/R) and oxygen-glucose deprivation (OGD). We found that TRPC6 expression was increased in wild type (WT) mice cortical neurons following I/R and in primary neurons with OGD, and that deletion of TRPC6 reduced the I/R-induced brain infarct in mice and the OGD- /neurotoxin-induced neuronal death. Using live-cell imaging to examine intracellular Ca2+ levels ([Ca2+]i), we found that OGD induced a significant higher increase in glutamate-evoked Ca2+ influx compared to …

The Behavior Of Humans And Wildlife With Respect To Roads: Insights For Mitigation And Management, Molly Grace

Electronic Theses and Dissertations

Road ecology is the study of how roads and wildlife interact. Traditionally, road ecologists have primarily focused on one effect of roads: roadkill. Though roadkill can have devastating effects on wildlife populations, roads have sub-lethal impacts that are gaining more and more attention from the scientific community. These sub-lethal impacts include noise, light, and chemical pollution as well as altered habitat structure, which can all influence animal behavior. In this dissertation, I applied a behavioral ecology framework to study specific lethal and sub-lethal road effects with the goal of improving mitigation efforts. In Chapters 1 and 2, I evaluated how …

Effects Of An Acute High-Volume Isokinetic Intervention On Circulating Levels Of Tnf-Α And Stnfr: Influence Of Age, Eliott Arroyo Delgado

Electronic Theses and Dissertations

The immune system has been implicated in recovery and muscle regeneration following exercise. In response to muscle damage, the immune system responds with an increase in circulating pro-inflammatory cytokines with the goal of recruiting leukocytes to the damaged area. Tumor Necrosis Factor-alpha (TNF-α), in particular, has been shown to be implicated in both muscle regeneration and muscle wasting. However, it remains unclear whether TNF-α is responsible for the age-related losses in muscle size and function. Also, due to the high clearance rate of TNF-α from circulation, analyzing the circulating levels of soluble TNF-α receptors 1 and 2 (STNFR1 and STNFR2) …

Effects Of An Acute High-Volume Isokinetic Intervention On Inflammatory And Strength Changes: Influence Of Age, Joseph Gordon

Electronic Theses and Dissertations

PURPOSE: The purpose of this study was to compare the effects of a high volume isokinetic intervention on lower body strength and inflammation, as well as markers of muscle damage in the subsequent 48 hours between younger and middle-aged men. METHODS: 19 healthy, recreationally trained men were randomly assigned to two groups, younger adults (YA: 21.8 ± 2.0 y; 90.7 ± 11.6 kg; 21.5 ± 4.1 % body fat), or middle-aged adults (MA: 47.0 ± 4.4 y; 96.0 ± 21.5; 24.8 ± 6.3 % body fat). Both groups reported to the human performance laboratory (HPL) on four separate occasions. On …

A Major Dna Double Strand Repair Pathway And Cancer-Associated Circulating Proteins Are Effecters Of Epigenetic Revision., Brittany Allen

Electronic Theses and Dissertations

DNA methylation is a vital epigenetic process that acts as a major control mechanism for gene expression. In addition to its essential role in many normal cellular processes, it is also implicated in a wide variety of disease states and processes including cancer. Along with genetic mutations, aberrant DNA methylation patterns, specifically the inappropriate DNA methylation or demethylation of CpG residues, may activate oncogenes or suppress tumor suppressor genes, respectively. These changes can generate or facilitate the progression of tumorigenesis and tend to accumulate throughout the development of cancer. Although they play such a major role in cancer and in …

The Effects Of Sprint Interval Training And Maturity Status On Metabolic And Neuromuscular Fatigue Thresholds In Adolescents, Kyle Beyer

Electronic Theses and Dissertations

Purpose: To examine the maturity-related differences in the adaptations to systemic and localized fatigue thresholds (FTs) in response to sprint interval training (SIT) amongst adolescent male athletes. Methods: Twenty-seven adolescent male athletes, 11-17 years of age, completed pre-testing, six weeks of SIT, and post-testing. Participants were grouped according to their number of years from peak height velocity (PHV), an estimation of somatic maturity status, into PRE ( < -1.5yr), PERI (between -1.5 to +1.5yr) and POST ( > +1.5yr) PHV groups. Each testing session consisted of a ramp exercise protocol on a cycle ergometer. During the protocol, three systemic FTs, gas exchange threshold, ventilatory threshold, and respiratory compensation point were calculated …

Development Of Molecular Diagnostic Tools For Mycobacterium Species, Hillary Bengtson

Electronic Theses and Dissertations

This dissertation focuses on the development of diagnostic tools for mycobacteria using hybridization based technologies including binary deoxyribozyme (BiDz) sensors and microarrays. The genus Mycobacterium, is a diverse group of bacteria containing 150+ species including M. tuberculosis (M.tb) and non-tuberculous mycobacteria (NTM) which exhibit a range of pathogenicity, drug susceptibility and growth characteristics. M. tuberculosis (M.tb) is the causative agent of tuberculosis (TB) and the leading cause of infectious disease related deaths worldwide. The control of TB is limited by the lack of sensitive and specific diagnostic tools available at the point of care (POC). The studies presented here illustrate …

A Chemical And Genetic Approach To Study The Polyamine Transport System In Drosophila, Minpei Wang

Electronic Theses and Dissertations

Polyamines are small cationic molecules that play important roles in most vital cellular processes including cell growth and proliferation, regulation of chromatin structure, translation and programmed cell death. Cellular polyamine pools are maintained by a balance between biosynthesis and transport (export and import). Increased polyamine biosynthesis activity and an active transport system are characteristics of many cancer cell lines, and polyamine depletion has been shown to be a viable anticancer strategy. Polyamine levels can be depleted by α-difluoromethylornithine (DFMO), an inhibitor of the key polyamine biosynthesis enzyme ornithine decarboxylase. However, malignant cells often circumvent DFMO therapy by up-regulating polyamine import; …

Discovery And Characterization Of Novel Antimicrobials Against Mycobacterium Tuberculosis, Carolina Rodrigues Felix

Electronic Theses and Dissertations

Tuberculosis disease is currently a global health emergency, causing the most deaths worldwide due a single infectious agent. Eradication of TB is hampered by lack of an effective vaccine and poor treatment options. During infection, host-derived cues such as hypoxia and starvation induce Mycobacterium tuberculosis to halt replication and become dormant, which leads to tolerance to front-line antibiotics used in the TB treatment. This dormant phenotype causes delayed clearance of M. tuberculosis, therefore a long treatment time is required for stable cure without relapse. Poor patient compliance increases the emergence of drug resistant strains, posing yet another challenge for the …

Go With The Flow: Patterns Of Connectivity In Low Dispersal Coral Reef Gobies (Coryphopterus Spp.) Throughout The Western Atlantic, Daniel Volk

Electronic Theses and Dissertations

Gene flow is an integral biological process that can mediate speciation. While many consider the ocean to be an open environment, there are many barriers that limit gene flow, particularly in the western Atlantic. I analyzed data from two widespread, coral reef fishes, the bridled goby (Coryphopterus glaucofraenum) and sand-canyon goby (C. venezuelae), throughout their range in the western Atlantic. Using two genetic datasets, mitochondrial DNA (mtDNA) and genomic SNPs, I investigated the evolutionary history of these species and inferred the location and strength of putative barriers. My results suggest that several unique lineages have genetically diverged from one another …

The Paths Less Traveled: Movement Of Gopher Tortoises Along Roads And Railways, Rhett Rautsaw

Electronic Theses and Dissertations

Urbanization and an expanding human population have led to a large degree of habitat destruction and fragmentation. These, in turn, reduce biodiversity and wildlife population sizes on a global scale. Transportation infrastructure, such as roads and railways, are some of the largest contributors to habitat fragmentation. Roads are well-established to negatively impact wildlife, but some studies suggest a potential use in habitat connectivity by functioning as wildlife corridors to connect distant populations. Railways are similarly known to impact wildlife by increasing mortality rates as well as provide unique risks such as electrocution and entrapment when compared to roads. However, the …

Discovery And Characterization Of Antimalarials With Novel Mechanisms Of Action, Bracken Roberts

Electronic Theses and Dissertations

Malaria kills over 500,000 people each year and over a third of the global population is at risk of infection. Though the human race has been fighting the malaria war for over 4,000 years and we have made great strides in eliminating malaria from many countries, we are treading on the edge of what could be another malaria epidemic primarily due to widespread drug resistance. There are documented cases of resistance for every known antimalarial in use today, including Artemisinins. It is critical that we open a new window of discovery in development of next generation antimalarials that circumvent current …

The Effect Of Repeated Sprint Training In Hypoxia And Beta-Alanine Supplementation On Exercise Performance, Ran Wang

Electronic Theses and Dissertations

The primary objective of this study was to evaluate the synergistic effects of repeated sprint training in hypoxia (RSH) and beta-alanine supplementation on performance in recreationally active men. Participants were randomly assigned to one of the following groups: hypoxia + beta-alanine (HB, n = 10), hypoxia + placebo (HP, n = 9), normoxia + beta-alanine (NB, n = 11) and normoxia + placebo (NP, n = 8). All participants completed a total of 8 training sessions (each consisting of 3 sets of 5 × 10-s sprints at a resistance of 7.5% of body mass, with 20-s rest intervals between sprints) …

Assessment Of Tattoo And Silicone Wounds In Terms Of Time Of Treatment And Perceived Treatment Quality, M Pettitt

Electronic Theses and Dissertations

At the point of injury, critical medical tasks include locating and identifying an injury as well as applying the appropriate initial care. Over the past decade, to increase the fidelity of wound representation and ultimately the quality of medical care, a considerable amount of research and development has occurred to improve simulated wounds during training, primarily at the point of injury. As material and techniques mature and as more relevant data is collected on tissue properties, examining what fidelity is required for training at the point of injury is crucial. The main objective of this effort was to assess a …

Downregulation In Ifngr1 Increases Suspectiblity To Mycobacterium Avium Subspecies Paratuberculosis Infection In Crohn's Disease, Zin Mar Htun

Electronic Theses and Dissertations

BACKGROUND: Crohn's disease (CD) is an inflammatory bowel disease (IBD) and has been associated with Mycobacterium avium subspecies paratuberculosis (MAP). MAP has been detected in stool, tissue and blood samples from patients with CD. Gamma interferon (γ-IFN) is an inflammatory cytokine that plays a crucial role in killing intracellular pathogens like MAP, and its receptor (IFNGR1) mutations cause immunodeficiency and severe disseminated mycobacterial infections. The role of MAP in association with IFNGR1 mutation in CD patients have not been investigated. METHODS: In this study, we investigated blood samples of 79 human subjects for MAP infection in association with IFNGR1 gene …

Mucking About: Hydrologic Regime And Soil Carbon Storage In Restored Subtropical Wetlands, Alicia Huber

Electronic Theses and Dissertations

Wetlands are extremely important ecosystems that have declined drastically worldwide, continue to be lost, and are threatened globally. They perform a number of important ecosystem services such as flood control, provide habitat for many species, and have aesthetic and recreational value. Wetlands are also important to the global carbon (C) cycle. Wetland soils are especially effective C sinks because they have high primary productivity and low decomposition rates due to flooded, anoxic conditions. Increased recognition of wetlands' value has led to more ecological and hydrological restoration of degraded wetlands to mitigate the effects of wetland destruction. Hydrological restoration, which attempts …

Using Biomarkers To Assess The Migratory Ecology And Reproduction Of The Florida Green Turtle (Chelonia Mydas), Ryan Chabot

Electronic Theses and Dissertations

Migratory connectivity between breeding and foraging areas is a vital component of the ecology of a diverse collection of marine vertebrates. Habitat quality, composition, and resource availability at these locations have direct ramifications for individual fitness. The green turtle (Chelonia mydas) is a long-lived, highly migratory species of conservation concern. Important green turtle nesting habitat in Florida is protected, but more information is needed to identify foraging habitats and the influence these habitats have on reproduction. Here, I used stable isotope analysis of δ13C, δ15N, and δ34S and satellite telemetry validation to determine the number of putative foraging areas used …

Cross-Continental Insights Into Jaguar (Panthera Onca) Ecology And Conservation, Joe Figel

Electronic Theses and Dissertations

The jaguar (Panthera onca) is a widely distributed large carnivore and the focal species of a range-wide connectivity initiative known as the jaguar conservation network (JCN). Comprised of ~83 Jaguar Conservation Units (JCUs) and ~75 corridors from northern Mexico to Argentina, the JCN functions as a conduit for jaguar movement and gene flow. Key linkages in the network are imperiled by human population growth, large-scale agriculture, highway expansion, and other infrastructural development. Labeled "corridors of concern," these vulnerable linkages are imperative to the maintenance of connectivity and genetic diversity throughout jaguar distribution. I take a multi-faceted approach to analyze conservation …

Novel Cytokine Signaling And Molecular Therapeutic Strategy In Pancreatic Cancer, Sarah Gitto

Electronic Theses and Dissertations

Pancreatic ductal adenocarcinoma (PDAC) is highly chemo-resistant and has a five year survival rate of < 8%. Risk factors of pancreatic cancer, such as chronic pancreatitis, help to elicit a pro-tumor immune response, and highly fibrotic environment that promotes tumorigenesis. To study how chronic pancreatitis promotes cancer initiation, traditional KRasG12D mice and double mutant Akt1Myr/KrasG12D mice were used to model microenvironment changes. Akt1Myr/KrasG12D mice were more susceptible to chronic tissue damage, accelerated tumor development and metastatic disease. These mice exhibited histological changes consistent with immune cell privilege, where M2 macrophages and non-cytotoxic eosinophils were co-localized with fibrotic regions. IL-5 expression was up regulated in pancreatic cells undergoing acinar to ductal metaplasia and then diminished in advanced lesions. Tumor cells treated with IL-5 exhibit increased migration and activation through STAT5 signaling. Collectively, the results suggest that eosinophils, which are responsive to IL-5, are key mediators in the pancreatic environment subjected to chronic inflammation and injury. Current therapeutics fall short in increasing patient survival. There remains an urgent need for innovative treatments and thus we tested difluoromethylornithine (DFMO) in combination with a novel polyamine transport inhibitor, Trimer44NMe, against Gemcitabine-resistant PDAC cells. Prior clinical failures when targeting polyamine biosynthesis with DFMO monotherapy may be due to tumor escape via an undefined polyamine transport system. In pancreatic tumor cells DFMO alone and with Trimer44NMe significantly reduced PDAC cell viability by inducing apoptosis or cell cycle arrest. In vivo orthotopic PDAC growth with DFMO treatment resulted in decreased c-Myc expression, a readout of polyamine pathway dysfunction. Moreover, dual inhibition significantly prolonged survival of tumor-bearing mice, and increased M1 macrophage infiltration and reduced FoxP3 expression. Collectively, these studies demonstrate that targeting polyamine pathways in PDAC is a promising immunomodulating therapy that increases survival.

Chaperonin Containing Tcp1 (Cct) As A Target For Cancer Therapy, Ana Carr

Electronic Theses and Dissertations

Treatments for aggressive cancers like triple negative breast cancer (TNBC) and small-cell lung cancer (SCLC) have not improved and remain associated with debilitating side effects. There is an unmet medical need for better, druggable targets and improved therapeutics. To this end, we investigated the role of Chaperonin-Containing TCP1 (CCT), an evolutionarily conserved protein-folding complex composed of eight subunits (CCT1-8), in oncogenesis. Our laboratory was the first to report that the CCT2 subunit is highly expressed in breast cancer and could be therapeutically targeted. To determine whether CCT is a marker of disease progression in other cancers, we analyzed CCT2 gene …

Reproductive Life History And Signal Evolution In A Multi-Species Assemblage Of Electric Fish, Joseph Waddell

Electronic Theses and Dissertations

Animals that co-occur in sympatry with multiple closely-related species use reproductive mate attraction signals not only to assess the quality of a potential conspecific mate (sexual selection), but also to discriminate conspecifics from heterospecifics (species recognition). However, the extent to which sexual selection and species recognition may interact, or even conflict, is poorly known. Neotropical electric fish offer unrivaled opportunities for understanding this problem. They generate simple, stereotyped mate attraction signals that are easy to record and quantify, and that are well-understood from the neurobiological perspective. Additionally, they live in electrically-crowded environments, where multiple congeners live and reproduce in close …

The Role Of The Y-Chromosome In The Evolution Of Autosomally Coded Traits, Ian Kutch

Electronic Theses and Dissertations

Recent work indicates that the Y-chromosome of the fruit fly Drosophila melanogaster can influence gene regulation on the autosomes and X chromosome. This newly discovered function of the Y has the potential to dramatically shape the regulatory evolution of numerous genes that reside throughout the genome; even for genes that code for both male and female traits. Given that the mechanism underlying the Y-linked influence on gene expression in D. melanogaster appears to exist in other independently evolved heterogametic sex chromosomes, the evolutionary implications of Y-linked regulatory variation (YRV) deserves to be explored. These implications include the potential for Y-chromosomes …

The Effect Of K562-Il21-2 Plasma Membrane Particles On The Proliferation Of Natural Killer Cells To Fight Cancer, Michelle Prophete

Honors Undergraduate Theses

Immunotherapy has emerged as a current and future paradigm of cancer treatment, which utilizes the body’s immune system to eradicate cancer. Natural Killer (NK) cells as part of the innate immune system have immense potential in their anti-tumor cytotoxic activities and host cell surveillance properties. NK cells comprise approximately five to fifteen percent of peripheral blood lymphocytes and can be proliferated in vitro using recently developed methods with co-cultures with feeder cells (derived from engineered tumor cells) or plasma membrane (PM) particles, produced from the fore mentioned feeder cells, in combination with soluble cytokines. For efficient growth and maintenance of …

The Response Of Satellite Glial Cells To P2x7 Receptor Activation, Christina D. Kursewicz

Honors Undergraduate Theses

Satellite glial cells (SGCs) surround the cell bodies of neurons of the peripheral nervous system, including those of the sensory ganglia. Their close apposition to the neuronal soma allows for bi-directional communication between neurons and SGCs, which are thought to regulate neuronal activity. After nerve injury, SGCs in the dorsal root ganglia contribute to neuropathic pain. Although the mechanisms are not fully understood, SGCs show increased coupling via gap junctions, and communicate with the neuron via bi-directional purinergic signaling after nerve injury. The increased coupling between SGCs and neurons may have implications for chronic pain following peripheral nerve injury. In …

An Rnai Screen To Identify Components Of A Polyamine Transport System, Adam J. Foley

Honors Undergraduate Theses

Polyamines, specifically putrescine, spermidine, and spermine, are small cationic molecules found in all organisms. Cells can biosynthetically make these molecules, or alternatively, they can be transported from the extracellular environment. Malignant cells have been shown to require relatively high amounts of polyamines. There is a chemotherapeutic agent, DFMO, used to block the biosynthesis of polyamines. Many malignant cells can circumvent DFMO therapy by activating their transport system. A potential solution is to simultaneously block biosynthesis and transport of polyamines. However, little is known about the polyamine transport system in higher eukaryotes.

This thesis aims to add to the basic biological …

Alpha-Synuclein: Insight Into The Hallmark Of Parkinson's Disease As A Target For Quantitative Molecular Diagnostics And Therapeutics, Baggio A. Evangelista

Honors Undergraduate Theses

Parkinson’s disease (PD) is the second-most common neurodegenerative disease after Alzheimer’s disease. With 500,000 individuals currently living with Parkinson’s and nearly 60,000 new cases diagnosed each year, this disease causes significant financial burden on the healthcare system - amassing to annual expenditures totaling 200 billion dollars; predicted to increase through 2050. The disease phenotype is characterized by a combination of a resting tremor, bradykinesia, muscular rigidity, and depression due to dopaminergic neuronal death in the midbrain. The cause of the neurotoxicity has been largely discussed, with strong evidence suggesting that the protein, alpha-Synuclein, is a key factor. Under native conditions, …

Characterizing The Function Of The N-Terminal Domain Of Omi/Htra2, Christine Nguyen

Honors Undergraduate Theses

The yeast two-hybrid system was used to isolate and characterize protein interactors of the N-terminal domain of the serine protease Omi/HtrA2 (high temperature requirement protein A2) encompassing amino acids 31-133. This large domain of Omi/HtrA2 is usually cleaved and removed through autoproteolysis to produce the mature form of the protein. Whether the N-terminal domain has any function after its removal is unknown. Omi/HtrA2 is involved in a variety of diseases including cancers, neurodegenerative disorders, and metabolic disorders, but thus far, it is assumed that its normal function is the degradation of specific substrates. To characterize any potential function of Omi/HtrA2’s …