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Articles 3871 - 3900 of 108148
Full-Text Articles in Life Sciences
Correction: Home Sweet Home: Spatiotemporal Distribution And Site Fidelity Of The Reef Manta Ray (Mobula Alfredi) In Dungonab Bay, Sudan (Movement Ecology, (2022), 10, 1, (22), 10.1186/S40462-022-00314-9), Anna M. Knochel, Nigel E. Hussey, Steven T. Kessel, Camrin D. Braun, Jesse E.M. Cochran, Graham Hill, Rebecca Klaus, Tarik Checkchak, Nasereldin M. Elamin El Hassen, Mohammed Younnis, Michael L. Berumen
Correction: Home Sweet Home: Spatiotemporal Distribution And Site Fidelity Of The Reef Manta Ray (Mobula Alfredi) In Dungonab Bay, Sudan (Movement Ecology, (2022), 10, 1, (22), 10.1186/S40462-022-00314-9), Anna M. Knochel, Nigel E. Hussey, Steven T. Kessel, Camrin D. Braun, Jesse E.M. Cochran, Graham Hill, Rebecca Klaus, Tarik Checkchak, Nasereldin M. Elamin El Hassen, Mohammed Younnis, Michael L. Berumen
Integrative Biology Publications
Following publication of the original article [1], it was noted that due to a typesetting error, a duplicated version of Figure 6 was published as Figure 5. The correct Figure 5 has been included in this Correction and the original article has been corrected. The publisher apologises to the authors and readers for the inconvenience caused by the error.
Cumulative Cultural Evolution And Mechanisms For Cultural Selection In Wild Bird Songs, Heather Williams, Andrew Scharf, Anna R. Ryba, D. Ryan Norris, Daniel J. Mennill, Amy E.M. Newman, Stéphanie M. Doucet, Julie C. Blackwood
Cumulative Cultural Evolution And Mechanisms For Cultural Selection In Wild Bird Songs, Heather Williams, Andrew Scharf, Anna R. Ryba, D. Ryan Norris, Daniel J. Mennill, Amy E.M. Newman, Stéphanie M. Doucet, Julie C. Blackwood
Integrative Biology Publications
Cumulative cultural evolution, the accumulation of sequential changes within a single socially learned behaviour that results in improved function, is prominent in humans and has been documented in experimental studies of captive animals and managed wild populations. Here, we provide evidence that cumulative cultural evolution has occurred in the learned songs of Savannah sparrows. In a first step, “click trains” replaced “high note clusters” over a period of three decades. We use mathematical modelling to show that this replacement is consistent with the action of selection, rather than drift or frequency-dependent bias. Generations later, young birds elaborated the “click train” …
Status Of The Western Australian Pastoral Rangelands 2022: Total Vegetative Cover And Cover Risk, Department Of Primary Industries And Regional Development
Status Of The Western Australian Pastoral Rangelands 2022: Total Vegetative Cover And Cover Risk, Department Of Primary Industries And Regional Development
Natural resources published reports
The Department of Primary Industries and Regional Development monitors and reports on the vegetation condition of pastoral rangelands in Western Australia. This 2022 short report uses remotely sensed total vegetative cover data available to the end of October 2022, rainfall data to November 2022 and Stock Return data reported in 2021 (the most recent available) to determine cover risk. Cover risk at the land conservation district (LCD) level is an indicator of the likelihood of total cover declining to, or remaining at, Low or Very low levels. Total cover and cover risk may not be indicative of vegetation condition and …
Home Sweet Home: Spatiotemporal Distribution And Site Fidelity Of The Reef Manta Ray (Mobula Alfredi) In Dungonab Bay, Sudan, Anna M. Knochel, Nigel E. Hussey, Steven T. Kessel, Camrin D. Braun, Jesse E.M. Cochran, Graham Hill, Rebecca Klaus, Tarik Checkchak, Nasereldin M. Elamin El Hassen, Mohammed Younnis, Michael L. Berumen
Home Sweet Home: Spatiotemporal Distribution And Site Fidelity Of The Reef Manta Ray (Mobula Alfredi) In Dungonab Bay, Sudan, Anna M. Knochel, Nigel E. Hussey, Steven T. Kessel, Camrin D. Braun, Jesse E.M. Cochran, Graham Hill, Rebecca Klaus, Tarik Checkchak, Nasereldin M. Elamin El Hassen, Mohammed Younnis, Michael L. Berumen
Integrative Biology Publications
Background: Reef manta ray (Mobula alfredi) populations along the Northeastern African coastline are poorly studied. Identifying critical habitats for this species is essential for future research and conservation efforts. Dungonab Bay and Mukkawar Island National Park (DMNP), a component of a UNESCO World Heritage Site in Sudan, hosts the largest known M. alfredi aggregation in the Red Sea. Methods: A total of 19 individuals were tagged using surgically implanted acoustic tags and tracked within DMNP on an array of 15 strategically placed acoustic receivers in addition to two offshore receivers. Two of these acoustically monitored M. alfredi were also equipped …
Efficacy Of A Typical Clean-In-Place Protocol Against In Vitro Membrane Biofilms, Diwakar Singh, Sanjeev Anand
Efficacy Of A Typical Clean-In-Place Protocol Against In Vitro Membrane Biofilms, Diwakar Singh, Sanjeev Anand
Dairy Science and Food Science Faculty Publications: 2022 to Present
This study evaluates the effectiveness of a typical clean-in-place (CIP) protocol against in vitro biofilms on whey reverse osmosis (RO) membranes developed under static condition. Bacterial isolates obtained from RO membrane biofilms were used to develop single and multispecies biofilms under laboratory conditions. A typical commercial CIP protocol was tested against the 24-h-old biofilms, and included 6 sequential treatment steps based on alkali, surfactant, acid, enzyme, a second surfactant, and a sanitizer treatment step. Experiments were conducted in 4 replicates and the data were statistically analyzed. The results revealed a variation in the resistance of mixed-species biofilms against the individual …
Food Security & Urban Agriculture - Considerations For Soil Improvements And Crop Planning, Aaron Sedivy
Food Security & Urban Agriculture - Considerations For Soil Improvements And Crop Planning, Aaron Sedivy
Doctor of Plant Health Program: Dissertations and Student Research
Urban agriculture provides many benefits, such as energy conservation, rainwater remediation, increased aesthetic and property value, and therapeutic use for physical, cognitive, and emotional wellbeing. Urban agriculture can also provide critical integrity to each pillar of food security: availability, access, utilization, and stability. As urban agricultural activities increase, social interactions will follow in concert. This will provide opportunities for building trust through the two-way communication of contrasting perspectives, cultures, and beliefs using impartial narratives. Growers can use knowledge and understanding gained from these positive social interactions to formulate their personal paradigms for practice and better meet the needs of each …
Students' Perceptions Of Online Equine Courses And Their Impacts On Learning Outcomes, Blaire (Gibbens) Speck
Students' Perceptions Of Online Equine Courses And Their Impacts On Learning Outcomes, Blaire (Gibbens) Speck
Department of Animal Science: Dissertations, Theses, and Student Research
Post-secondary education is always changing and evolving. Over the last few years, significant changes in education have resulted in an increased number of online courses. Approximately 28% of students seeking higher education participate in at least one online course and 14% are enrolled exclusively in distance or online programs (Allen & Seaman, 2016). However, courses that are typically hands-on, like equine science, may be more challenging online. The hands-on experiences in equine science classes help prepare students for future careers. Due to an increase in students choosing to take courses online, a review of online teaching methods was conducted to …
Impacts Of Feeding Biochar To Beef Cattle On Greenhouse Gas Emissions And Performance And Characterizing Yearling Steers Grazing Smooth Bromegrass Pasture Using Gps, Holly Heil
Department of Animal Science: Dissertations, Theses, and Student Research
As global warming continues to rise, the pressure and growing demand for sustainable animal production is increasing. Livestock naturally produce greenhouse gas emissions through enteric fermentation. Dietary manipulation strategies have been sought out to decrease emissions in ruminants using feed additives.
Two independent finishing feedlot experiments evaluated two types of biochar and its effects on animal performance, carcass characteristics and greenhouse gas emissions. Experiment 1 utilized pistachio shell biochar and experiment 2 utilized biochar sourced from ponderosa pine wood waste, both types included at 1% of the diet DM. The addition of biochar to the diet did not impact animal …
Evaluation Of Nutritional Factors Affecting Sow Reproductive Longevity, J'Nan E. Wittler
Evaluation Of Nutritional Factors Affecting Sow Reproductive Longevity, J'Nan E. Wittler
Department of Animal Science: Dissertations, Theses, and Student Research
Sow reproductive longevity is an important trait for swine operations from a production and economic standpoint. Previous research has shown that a sow needs to produce 3 litters before she covers the costs associated with introducing her to the operation. A literature review of research conducted related to sow longevity is discussed in Chapter 1. Chapters 2 and 3 present data from the University of Nebraska – Lincoln’s long-term sow longevity research. The research looks at the effects of energy restriction with soy hulls during gilt development on sow reproductive longevity through 4 parities. Chapter 2 presents data from replications …
Image Analysis And Machine Learning In Agricultural Research, Xinzheng Chen
Image Analysis And Machine Learning In Agricultural Research, Xinzheng Chen
Doctor of Plant Health Program: Dissertations and Student Research
Agricultural research has been a focus for academia and industry to improve human well-being. Given the challenges in water scarcity, global warming, and increased prices of fertilizer, and fossil fuel, improving the efficiency of agricultural research has become even more critical. Data collection by humans presents several challenges including: 1) the subjectiveness and reproducibility when doing the visual evaluation, 2) safety when dealing with high toxicity chemicals or severe weather events, 3) mistakes cannot be avoided, and 4) low efficiency and speed.
Image analysis and machine learning are more versatile and advantageous in evaluating different plant characteristics, and this could …
The Casnr L.I.N.K.S. Newsletter: Learning Innovation Network For K-12 Schools, Edition 11, December 2022, Bailey Feit, Tammy Mittelstet
The Casnr L.I.N.K.S. Newsletter: Learning Innovation Network For K-12 Schools, Edition 11, December 2022, Bailey Feit, Tammy Mittelstet
CASNR L.I.N.K.S. Newsletter
The purpose of this L.I.N.K.S. newsletter is to provide a monthly update of opportunities and resources for K-12 schools to connect with the University of Nebraska's CASNR Food, Energy, Water, and Societal Systems (FEWS²) programs and partners.
This edition includes:
Teachers' corner, K-12 resources
Links to partners' newsletters
Top 5 success stories
FEWSS 2022 highlighted impact
Looking toward 2023
CASNR focus areas
Send your students to campus!
Scholarship opportunities
Are We Building Back Better?, Fabian M. Dayrit
Are We Building Back Better?, Fabian M. Dayrit
Chemistry Faculty Publications
No abstract provided.
Leveraging Pleiotropy To Discover And Interpret Gwas Results For Sleep-Associated Traits, Sung Chun, Sebastian Akle, Athanasios Teodosiadis, Brian E Cade, Heming Wang, Tamar Sofer, Daniel S Evans, Katie L Stone, Sina A Gharib, Sutapa Mukherjee, Lyle J Palmer, David Hillman, Jerome I Rotter, Craig L Hanis, John A Stamatoyannopoulos, Susan Redline, Chris Cotsapas, Shamil R Sunyaev
Leveraging Pleiotropy To Discover And Interpret Gwas Results For Sleep-Associated Traits, Sung Chun, Sebastian Akle, Athanasios Teodosiadis, Brian E Cade, Heming Wang, Tamar Sofer, Daniel S Evans, Katie L Stone, Sina A Gharib, Sutapa Mukherjee, Lyle J Palmer, David Hillman, Jerome I Rotter, Craig L Hanis, John A Stamatoyannopoulos, Susan Redline, Chris Cotsapas, Shamil R Sunyaev
Journal Articles
Genetic association studies of many heritable traits resulting from physiological testing often have modest sample sizes due to the cost and burden of the required phenotyping. This reduces statistical power and limits discovery of multiple genetic associations. We present a strategy to leverage pleiotropy between traits to both discover new loci and to provide mechanistic hypotheses of the underlying pathophysiology. Specifically, we combine a colocalization test with a locus-level test of pleiotropy. In simulations, we show that this approach is highly selective for identifying true pleiotropy driven by the same causative variant, thereby improves the chance to replicate the associations …
Assessing Selective Export Of Fluorescent Ssa4 Reporters, Caroline Firmin, Rebecca Adams
Assessing Selective Export Of Fluorescent Ssa4 Reporters, Caroline Firmin, Rebecca Adams
Science University Research Symposium (SURS)
The process of creating proteins from mRNA is necessary for cell viability. Importantly, the proteins that are generated are differentially regulated so that the cell makes specific proteins in response to its environment. For example, mRNA is selectively exported during stress conditions to allow response to this stress. During heat shock at 42°C, in which proteins are denatured, the gene SSA4 encodes a selectively transported protein chaperone that allows refolding of denatured proteins. This study sought to explore the mechanisms of this selective export. To do this, I analyzed the expression of a fluorescent reporter wherein GFP is expressed with …
Comparison Of Kanamycin-Resistant Bacteria In Earthworm Digestive Tracts And Soil From Compost Bins, Samantha Dooyema, Martin Dolan, Abigal Morse
Comparison Of Kanamycin-Resistant Bacteria In Earthworm Digestive Tracts And Soil From Compost Bins, Samantha Dooyema, Martin Dolan, Abigal Morse
Science University Research Symposium (SURS)
Antibiotic-resistant bacteria are becoming more prevalent in soil as humans have increased impacts on the environment. Previous research proposed that earthworms could affect bacteria distribution as soil is ingested and filtered through their bodies. This research aims to see if kanamycin-resistance bacteria is the same in earthworm digestive tracts as in the soil the earthworms inhabit. We expect that the gut contents and soil will vary in the occurrence of kanamycin-resistant bacteria. Earthworms and composted soil samples were collected from compost bins at a residential home in Nashville, Tennessee. Digestive tracts were dissected from the earthworms and homogenized. Kanamycin-resistant bacteria …
Developing Novel Remote Camera Approaches To Assess And Monitor The Population Status Of Australian Sea Lions, Mathew Hourston, Daniela Waltrick, Stuart Blight, Ainslie Denham, Alex Hesp, Steve Taylor
Developing Novel Remote Camera Approaches To Assess And Monitor The Population Status Of Australian Sea Lions, Mathew Hourston, Daniela Waltrick, Stuart Blight, Ainslie Denham, Alex Hesp, Steve Taylor
Fisheries research reports
This project trialled the use of remote cameras to monitor the relative abundance of Australian sea lions (ASLs, Neophoca cinerea) at three Western Australian (WA) breeding colonies. The research was undertaken by the Department of Primary Industries and Regional Development (DPIRD) to assess whether the analysis of camera footage could be used to estimate ASL relative abundance, providing an alternative to the traditional “boots on the ground” approach (hereon in “BoG”) of visiting colonies to count animals. This report outlines the strengths and limitations of this novel approach rather than providing an update on the population status of ASLs. …
A Framework For Detecting Noncoding Rare-Variant Associations Of Large-Scale Whole-Genome Sequencing Studies, Zilin Li, Xihao Li, Hufeng Zhou, Sheila M Gaynor, Margaret Sunitha Selvaraj, Theodore Arapoglou, Corbin Quick, Yaowu Liu, Han Chen, Ryan Sun, Rounak Dey, Donna K Arnett, Paul L Auer, Lawrence F Bielak, Joshua C Bis, Thomas W Blackwell, John Blangero, Eric Boerwinkle, Donald W Bowden, Jennifer A Brody, Brian E Cade, Matthew P Conomos, Adolfo Correa, L Adrienne Cupples, Joanne E Curran, Paul S De Vries, Ravindranath Duggirala, Nora Franceschini, Barry I Freedman, Harald H H Göring, Xiuqing Guo, Rita R Kalyani, Charles Kooperberg, Brian G Kral, Leslie A Lange, Bridget M Lin, Ani Manichaikul, Alisa K Manning, Lisa W Martin, Rasika A Mathias, James B Meigs, Braxton D Mitchell, May E Montasser, Alanna C Morrison, Take Naseri, Jeffrey R O'Connell, Nicholette D Palmer, Patricia A Peyser, Bruce M Psaty, Laura M Raffield, Susan Redline, Alexander P Reiner, Muagututi'a Sefuiva Reupena, Kenneth M Rice, Stephen S Rich, Jennifer A Smith, Kent D Taylor, Margaret A Taub, Ramachandran S Vasan, Daniel E Weeks, James G Wilson, Lisa R Yanek, Wei Zhao, Jerome I Rotter, Cristen J Willer, Pradeep Natarajan, Gina M Peloso, Xihong Lin
A Framework For Detecting Noncoding Rare-Variant Associations Of Large-Scale Whole-Genome Sequencing Studies, Zilin Li, Xihao Li, Hufeng Zhou, Sheila M Gaynor, Margaret Sunitha Selvaraj, Theodore Arapoglou, Corbin Quick, Yaowu Liu, Han Chen, Ryan Sun, Rounak Dey, Donna K Arnett, Paul L Auer, Lawrence F Bielak, Joshua C Bis, Thomas W Blackwell, John Blangero, Eric Boerwinkle, Donald W Bowden, Jennifer A Brody, Brian E Cade, Matthew P Conomos, Adolfo Correa, L Adrienne Cupples, Joanne E Curran, Paul S De Vries, Ravindranath Duggirala, Nora Franceschini, Barry I Freedman, Harald H H Göring, Xiuqing Guo, Rita R Kalyani, Charles Kooperberg, Brian G Kral, Leslie A Lange, Bridget M Lin, Ani Manichaikul, Alisa K Manning, Lisa W Martin, Rasika A Mathias, James B Meigs, Braxton D Mitchell, May E Montasser, Alanna C Morrison, Take Naseri, Jeffrey R O'Connell, Nicholette D Palmer, Patricia A Peyser, Bruce M Psaty, Laura M Raffield, Susan Redline, Alexander P Reiner, Muagututi'a Sefuiva Reupena, Kenneth M Rice, Stephen S Rich, Jennifer A Smith, Kent D Taylor, Margaret A Taub, Ramachandran S Vasan, Daniel E Weeks, James G Wilson, Lisa R Yanek, Wei Zhao, Jerome I Rotter, Cristen J Willer, Pradeep Natarajan, Gina M Peloso, Xihong Lin
Journal Articles
Large-scale whole-genome sequencing studies have enabled analysis of noncoding rare-variant (RV) associations with complex human diseases and traits. Variant-set analysis is a powerful approach to study RV association. However, existing methods have limited ability in analyzing the noncoding genome. We propose a computationally efficient and robust noncoding RV association detection framework, STAARpipeline, to automatically annotate a whole-genome sequencing study and perform flexible noncoding RV association analysis, including gene-centric analysis and fixed window-based and dynamic window-based non-gene-centric analysis by incorporating variant functional annotations. In gene-centric analysis, STAARpipeline uses STAAR to group noncoding variants based on functional categories of genes and incorporate …
Targeting A Highly Repetitive Genomic Sequence For Sensitive And Specific Molecular Detection Of The Filarial Parasite Mansonella Perstans From Human Blood And Mosquitoes, Nils Pilotte, Tamara Thomas, Michael F. Zulch, Allison R. Sirois, Corrado Minetti, Lisa J. Reimer, Steven A. Williams, Lori J. Saunders
Targeting A Highly Repetitive Genomic Sequence For Sensitive And Specific Molecular Detection Of The Filarial Parasite Mansonella Perstans From Human Blood And Mosquitoes, Nils Pilotte, Tamara Thomas, Michael F. Zulch, Allison R. Sirois, Corrado Minetti, Lisa J. Reimer, Steven A. Williams, Lori J. Saunders
Biological Sciences: Faculty Publications
Background Mansonella perstans is among the most neglected of the neglected tropical diseases and is believed to cause more human infections than any other filarial pathogen in Africa. Based largely upon assumptions of limited infection-associated morbidity, this pathogen remains understudied, and many basic questions pertaining to its pathogenicity, distribution, prevalence, and vector-host relationships remain unanswered. However, in recent years, mounting evidence of the potential for increased Mansonella infection-associated disease has sparked a renewal in research interest. This, in turn, has produced a need for improved diagnostics, capable of providing more accurate pictures of infection prevalence, pathogen distribution, and vector-host interactions. …
Functional Analysis Of Legionella Pneumophila Effector Protein, Shreya Neupane
Functional Analysis Of Legionella Pneumophila Effector Protein, Shreya Neupane
Masters Theses & Specialist Projects
Legionella pneumophila is a gram-negative bacterium that causes Legionnaire’s disease (a severe form of pneumonia) in humans. L. pneumophila can cause infection by utilizing its Type IV secretion system, a protein secretion system that transports proteins from the bacterial cytosol into the infected macrophage. Effectors released from the Type Iv secretion system allow L. pneumophila to create a safe environment to survive, replicate and cause infection. One such effector, RavQ, inhibits cell proliferation of mammalian HEK 293T cells and localizes to the cell’s nucleus, leading us to hypothesize that RavQ interferes with cellular activity in the nucleus. To detect its …
Deciphering The Role Of Spl12 And Agl6 From A Genetic Module That Functions In Nodulation And Root Regeneration In Medicago Sativa., Vida Nasrollahi, Ze-Chun Yuan, Qing Shi Mimmie Lu, Tim Mcdowell, Susanne Kohalmi, Abdelali Hannoufa
Deciphering The Role Of Spl12 And Agl6 From A Genetic Module That Functions In Nodulation And Root Regeneration In Medicago Sativa., Vida Nasrollahi, Ze-Chun Yuan, Qing Shi Mimmie Lu, Tim Mcdowell, Susanne Kohalmi, Abdelali Hannoufa
Biology Publications
Our results show that SPL12 plays a crucial role in regulating nodule development in Medicago sativa L. (alfalfa), and that AGL6 is targeted and downregulated by SPL12. Root architecture in plants is critical because of its role in controlling nutrient cycling, water use efficiency and response to biotic and abiotic stress factors. The small RNA, microRNA156 (miR156), is highly conserved in plants, where it functions by silencing a group of SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) transcription factors. We previously showed that transgenic Medicago sativa (alfalfa) plants overexpressing miR156 display increased nodulation, improved nitrogen fixation and enhanced root regenerative capacity during vegetative …
Characterizing The Cutaneous Microbiome Of Eurycea Lucifuga As A Potential Defense Against Chytridiomycosis, Madeline Key
Characterizing The Cutaneous Microbiome Of Eurycea Lucifuga As A Potential Defense Against Chytridiomycosis, Madeline Key
Senior Honors Theses
Chytridiomycosis is an emerging infectious disease that is significantly reducing global amphibian populations. The disease is caused by Batrachochytrium dendrobatidis (Bd), a fungus that lethally modifies amphibian skin. Recent research has suggested that the cutaneous microbiome of individual amphibians may play a role in susceptibility to the pathogen. In this study, twelve cave salamanders (Eurycea lucifuga) were collected. Cutaneous bacteria from each salamander were isolated and identified using Sanger Sequencing. Additionally, a Bd-challenge assay was performed to determine each isolate’s antifungal activity. Results indicated many microbial isolates possessed inhibitory capabilities against Bd, which may …
Spatial Models Can Improve The Experimental Design Of Field-Based Transplant Gardens By Preventing Bias Due To Neighborhood Crowding, Andrii Zaiats, Juan M. Raquena-Mullor, Matthew J. Germino, Jennifer S. Forbey, Bryce A. Richardson, T. Trevor Caughlin
Spatial Models Can Improve The Experimental Design Of Field-Based Transplant Gardens By Preventing Bias Due To Neighborhood Crowding, Andrii Zaiats, Juan M. Raquena-Mullor, Matthew J. Germino, Jennifer S. Forbey, Bryce A. Richardson, T. Trevor Caughlin
Biology Faculty Publications and Presentations
Field-based transplant gardens, including common and reciprocal garden experiments, are a powerful tool for studying genetic variation and gene-by-environment interactions. These experiments assume that individuals within the garden represent independent replicates growing in a homogenous environment. Plant neighborhood interactions are pervasive across plant populations and could violate assumptions of transplant garden experiments. We demonstrate how spatially explicit models for plant–plant interactions can provide novel insights on genotypes' performance in field-transplant garden designs. We used individual-based models, based on data from a sagebrush (Artemisia spp.) common garden, to simulate the impact of spatial plant–plant interactions on between-group differences in plant …
Legacy Metal Contamination Is Reflected In The Fish Gut Microbiome In An Urbanised Estuary, Alessandra L. Suzzi, Michael Stat, Geoff R. Macfarlane, Justin R. Seymour, Nathan L. R. Williams, Troy F. Gaston, Md Rushna Alam, Megan J. Huggett
Legacy Metal Contamination Is Reflected In The Fish Gut Microbiome In An Urbanised Estuary, Alessandra L. Suzzi, Michael Stat, Geoff R. Macfarlane, Justin R. Seymour, Nathan L. R. Williams, Troy F. Gaston, Md Rushna Alam, Megan J. Huggett
Research outputs 2022 to 2026
Estuaries are critical habitats subject to a range of stressors requiring effective management. Microbes are gaining recognition as effective environmental indicators, however, the response of host associated communities to stressors remains poorly understood. We examined microbial communities from seawater, sediments and the estuarine fish Pelates sexlineatus, in Australia's largest urbanised estuary, and hypothesised that anthropogenic contamination would be reflected in the microbiology of these sample types. The human faecal markers Lachno3 and HF183 were not detected, indicating negligible influence of sewage, but a gradient in copy numbers of the class 1 integron (intI-1), which is often used as …
Distribution And Export Of Particulate Organic Carbon In East Antarctic Coastal Polynyas, Lavenia Ratnarajah, Viena Puigcorbé, Sébastien Moreau, Montserrat Roca-Martí, Julie Janssens, Matthew Corkill, Luis Duprat, Cristina Genovese, Jan Lieser, Pere Masqué, Delphine Lannuzel
Distribution And Export Of Particulate Organic Carbon In East Antarctic Coastal Polynyas, Lavenia Ratnarajah, Viena Puigcorbé, Sébastien Moreau, Montserrat Roca-Martí, Julie Janssens, Matthew Corkill, Luis Duprat, Cristina Genovese, Jan Lieser, Pere Masqué, Delphine Lannuzel
Research outputs 2022 to 2026
Polynyas represent regions of enhanced primary production because of the low, or absent, sea-ice cover coupled with the proximity of nutrient sources. However, studies throughout the Southern Ocean suggest elevated primary production does not necessarily result in increased carbon export. Three coastal polynyas in East Antarctica and an off-shelf region were visited during the austral summer from December 2016 to January 2017 to examine the vertical distribution and concentration of particulate organic carbon (POC). Carbon export was also examined using thorium-234 (234Th) as a proxy at two of the polynyas. Our results show that concentrations and integrated POC …
Editorial: Tropicalization In Seagrasses: Shifts In Ecosystem Function, Glenn A. Hyndes, Jessie C. Jarvis, Kenneth L. Heck
Editorial: Tropicalization In Seagrasses: Shifts In Ecosystem Function, Glenn A. Hyndes, Jessie C. Jarvis, Kenneth L. Heck
Research outputs 2022 to 2026
Seagrass meadows form highly productive and diverse ecosystems that provide a range of ecosystem services along coasts of most continents (Barbier et al., 2011; Nordlund et al., 2016), yet they continue to experience large losses through direct and indirect human disturbances (Waycott et al., 2009; Duarte et al., 2018). Like other coastal ecosystems, including coral reefs and kelp forests, seagrasses are showing strong negative responses to elevated ocean temperatures and heatwaves, in which rising temperatures exceed their thresholds for survival [...].
Maturity Stage At Harvest Influences Antioxidant Phytochemicals And Antibacterial Activity Of Jujube Fruit (Ziziphus Mauritiana Lamk. And Ziziphus Spina-Christi L.), Adhbah R. H. Aldhanhani, Zienab F. R. Ahmed, Nikolaos Tzortzakis, Zora Singh
Maturity Stage At Harvest Influences Antioxidant Phytochemicals And Antibacterial Activity Of Jujube Fruit (Ziziphus Mauritiana Lamk. And Ziziphus Spina-Christi L.), Adhbah R. H. Aldhanhani, Zienab F. R. Ahmed, Nikolaos Tzortzakis, Zora Singh
Research outputs 2022 to 2026
Fruits of the genus Ziziphus are known for their medicinal and nutritional value. Thus, this study aimed to investigate the influence of different maturity stages (unripe, half-ripe, and ripe fruit) at harvest on the physicochemical characteristics, phytochemical composition, antioxidants, and antibacterial activities of Ziziphus mauritiana and Ziziphus spina-christi fruits. In both plant species, the unripe fruits had significantly higher (P < 0.05) phenolic and flavonoid content and antioxidant and antibacterial activity compared with ripe fruits. At all maturity stages, these features were significantly higher (P < 0.05) in Z. spina-christi fruits than in Z. mauritiana fruits. Regardless of the species, 13 phenolic compounds were identified and quantified in the fruit extracts. For both species, the concentration of individual phenolic compounds changed with fruit maturity. Among the phenolic compounds, the gallic acid, 4-hydroxybenzoic acid, salicylic acid, catechin, and rutin levels were significantly higher (P < 0.05) in Z. spina-christi fruits than those for Z. mauritiana fruits, whereas vanillic acid and quercetin showed the opposite trend. Additionally, trans-cinnamic acid was only detected in Z. spina-christi fruits. In conclusion, the mature unripe jujube fruit, especially in Z. spina-christi, was shown to be a promising source of various naturally occurring compounds of significant interest owing to its pharmacological and therapeutic properties as an antioxidant, anti-inflammatory, and analgesic.
Wildfires Enhance Phytoplankton Production In Tropical Oceans, Dongyan Liu, Chongran Zhou, John K. Keesing, Oscar Serrano, Axel Werner, Yin Fang, Yingjun Chen, Pere Masque, Janine Kinloch, Aleksey Sadekov, Yan Du
Wildfires Enhance Phytoplankton Production In Tropical Oceans, Dongyan Liu, Chongran Zhou, John K. Keesing, Oscar Serrano, Axel Werner, Yin Fang, Yingjun Chen, Pere Masque, Janine Kinloch, Aleksey Sadekov, Yan Du
Research outputs 2022 to 2026
Wildfire magnitude and frequency have greatly escalated on a global scale. Wildfire products rich in biogenic elements can enter the ocean through atmospheric and river inputs, but their contribution to marine phytoplankton production is poorly understood. Here, using geochemical paleo-reconstructions, a century-long relationship between wildfire magnitude and marine phytoplankton production is established in a fire-prone region of Kimberley coast, Australia. A positive correlation is identified between wildfire and phytoplankton production on a decadal scale. The importance of wildfire on marine phytoplankton production is statistically higher than that of tropical cyclones and rainfall, when strong El Niño Southern Oscillation coincides with …
Long-Term Patterns Of An Interconnected Core Marine Microbiota, Anders K. Krabberød, Ina M. Deutschmann, Marit F. M. Bjorbækmo, Vanessa Balagué, Caterina R. Giner, Isabel Ferrera, Esther Garcés, Ramon Massana, Josep M. Gasol, Ramiro Logares
Long-Term Patterns Of An Interconnected Core Marine Microbiota, Anders K. Krabberød, Ina M. Deutschmann, Marit F. M. Bjorbækmo, Vanessa Balagué, Caterina R. Giner, Isabel Ferrera, Esther Garcés, Ramon Massana, Josep M. Gasol, Ramiro Logares
Research outputs 2022 to 2026
Background Ocean microbes constitute ~ 70% of the marine biomass, are responsible for ~ 50% of the Earth’s primary production and are crucial for global biogeochemical cycles. Marine microbiotas include core taxa that are usually key for ecosystem function. Despite their importance, core marine microbes are relatively unknown, which reflects the lack of consensus on how to identify them. So far, most core microbiotas have been defined based on species occurrence and abundance. Yet, species interactions are also important to identify core microbes, as communities include interacting species. Here, we investigate interconnected bacteria and small protists of the core pelagic …
Adult Home Range Size And Juvenile Movements Of Gray Hawks In The Lower Rio Grande Valley, Texas, Usa, Michael T. Stewart, William S. Clark, Brian A. Millsap, Brent D. Bibles, Timothy Brush
Adult Home Range Size And Juvenile Movements Of Gray Hawks In The Lower Rio Grande Valley, Texas, Usa, Michael T. Stewart, William S. Clark, Brian A. Millsap, Brent D. Bibles, Timothy Brush
Biology Faculty Publications and Presentations
We studied the natural history of Gray Hawks (Buteo plagiatus) in the Lower Rio Grande Valley of Texas. We used GPS-GSM telemetry to quantify dispersal time and distance, winter home range size of juveniles, and home range size of adults. Home ranges were calculated using the kernel Brownian bridge home range estimator. The median dispersal date for 14 juvenile Gray Hawks was 11 August and they traveled a median straight-line distance of 453 km. Mean winter home range sizes for 11 juveniles was 707 ha. For juveniles, female winter home ranges were larger than those of males, and …
The Impact Of Glycine Betaine Applications On Drought Response In Wild Blueberries, Abigail Fisher
The Impact Of Glycine Betaine Applications On Drought Response In Wild Blueberries, Abigail Fisher
Honors College
Wild blueberries are an economically important crop for Maine, and with warming temperatures leading to increased periods of drought and increased soil moisture deficits, it is important to find new ways to combat the effects of drought. In this study, we aimed to look at the effect of foliar-applied glycine betaine applications on wild lowbush blueberries in both field and greenhouse experiments. The product being tested was Bluestim, a foliar-applied product containing >96% pure glycine betaine sold by Biobest. The product is claimed to work as an osmoprotectant allowing the plant to maintain turgor pressure and protect enzymes and macromolecules …