Life Sciences Commons^™

Usf Jamovi Tutorial Project: Open Education Resource, Aline Hitti, Saera Khan

USF OER Faculty Grant

Jamovi is an open source free software that USF staff, faculty and student can download to carry out any statistical analyses. The current report summarizes the progress made on an Open Education Resource Grant funded project, which aimed to created Jamovi tutorials. In this report, student feedback and faculty reaction are summarized after one semester of using the tutorials created.

Reevaluation Of The Described Subspecies Of Euphydryas Phaeton (Drury, 1773) With A Replacement Name For Melitaea Phaeton Schausi (Clark, 1927), Harry Pavulaan

The Taxonomic Report of the International Lepidoptera Survey

The present paper reevaluates the subspecific standing of the nominotypical and three described subspecies of Euphydryas phaeton (Drury, 1773). The nominotypical subspecies phaeton occupies the mid-Atlantic region, with undefined zones of contact with described subspecies borealis (F. Chermock & R. Chermock, 1940) to the north, and subspecies schausi (Clark, 1927) to the south. Nominotypical phaeton is an intermediate phenotype between borealis and schausi, which are each noticeably different from each other but both reasonably similar to intermediate (nominotypical) phaeton. Both borealis and schausi were synonymized under nominotypical phaeton since about time of their descriptions, by authors and list …

New Synonymies And Notes In Criodion Audinet-Serville (Coleoptera: Cerambycidae: Cerambycinae), Antonio Santos-Silva, Sergio Devesa

Insecta Mundi

Criodion angustatum Buquet, 1852 and C. pilosum Lucas, 1857 (Coleoptera: Cerambycidae: Cerambycinae) are synonymized with C. tomentosum Audinet-Serville, 1834. The holotypes of C. angustatum and C. hirsutum, and syntypes of C. pilosum and of C. tuberculatum Gahan, 1892 are illustrated for the first time. One of the type localities of C. tuberculatum is corrected.

Currently, Criodion Audinet-Serville, 1834 includes 13 species distributed from Guatemala to southern South America (Monné 2021; Tavakilian and Chevillotte 2021). Despite the relatively small number of species, they encompass several problems with their identification. For example, the specimens often identified as C. murinum Nonfried, 1895 …

Two New Species Of Deromecus Solier From Guatemala (Coleoptera: Elateridae: Pomachiliini), E. R. Fuller

Insecta Mundi

Deromecus georginas Fuller, new species, and Deromecus longitarsis Fuller, new species (Cole­optera: Elateridae: Pomachiliini) are described from cloud forest habitat on eastern coastal volcanoes in Quetzaltenango Department, Guatemala, and compared with Deromecus trivittatus Champion from Mexico.

Se describen la neuva especie Deromecus georginas Fuller y la neuva especie Deromecus longitarsis Fuller (Coleoptera: Elateridae: Pomachiliini), del hábitat del bosque nuboso, de los volcanes oriental de la costa, en el Departmento de Quetzaltenango, Guatemala, y se comparan con Deromecus trivittatus Cham­pion, de México.

The Elateridae are a conspicuous and diverse group of beetles in Central America (Champion 1894–1897). Adults of luminous …

Occurrence Of An Exotic Whitefly, Siphoninus Phillyreae (Haliday) (Hemiptera: Aleyrodidae) In South Korea And Its Potential Pathway Analysis, Seon Woo Lee, Hyun Jik Lee, Jun-Ran Kim, Soo-Jung Suh

Insecta Mundi

The ash whitefly, Siphoninus phillyreae (Haliday) (Hemiptera: Aleyrodidae), was first found in southern areas of South Korea during September 2019. During the survey of 2021, no additional specimens of the ash whitefly were found other than the previously reported regions. Attempts to trace a possible path­way for exotic ash whitefly suggested that this species probably followed pathways of illegal importation of infested plants from China or Japan and was unintentionally introduced into South Korea based on a survey-based study. This whitefly has not been intercepted at ports of entry to South Korea on imported plant material between 1999 and 2019 …

Micromentignatha Geberti, A New Tiger Beetle Species From Australia (Coleoptera: Cicindelidae), Jürgen Wiesner

Insecta Mundi

Micromentignatha geberti (Coleoptera: Cicindelidae), new species, is described. It is distinguished from the other members of the genus by its larger body size and shape of elytral maculation.

Due to the kindness of Christian Kerkering, I was able to study specimens of a tiger beetle species he recently acquired. It proved to be new to science and is described herein. It is a member of Micromentignatha Sumlin, 1981, which raises the number of species in this genus to four (Wiesner 2020: 327). A key to distinguish these congeners as well as a catalog of the genus are given herein.

Ishtarella Thailandica Martens, New Genus, New Species (Hymenoptera: Braconidae: Aphidiinae) Of Aphid Parasitoid From Thailand, With A Country Checklist Of Aphidiinae, Abigail P. Martens, Matthew L. Buffington, Donald L.J. Quicke, Marisa Raweearamwong, Buntika A. Butcher, Paul J. Johnson

Insecta Mundi

Ishtarella Martens new genus (Hymenoptera: Braconidae: Aphidiinae) and I. thailandica Martens new species are described and illustrated from Doi Phu Kha National Park, Nan Province, Thailand. The genus is assigned to the tribe Aphidiini, subtribe Trioxina. Based on morphology, Ishtarella appears most closely related to Binodoxys Mackauer. An updated checklist of the aphidiine fauna of Thailand, based on published records, is presented.

Parasitoid wasps in the subfamily Aphidiinae (Hymenoptera: Braconidae) comprise about 60 genera and more than 650 species worldwide (Yu et al. 2016). The Aphidiinae of Thailand were all but unknown prior to a Thai­land Inventory Group for Entomological …

Ardella Magnaemirabilis (Coleoptera: Scarabaeidae: Melolonthinae: Ardellini), A New Scarabaeoid Species, Genus And Tribe From The Southwestern United States, M. J. Paulsen

Insecta Mundi

An interesting new taxon of scarabaeoid beetle is described from western Texas, USA. The remark­ably small chafer, Ardella magnaemirabilis new genus, new species (Coleoptera: Scarabaeidae: Melolonthinae: Ardellini) is described and compared to other diminutive scarabaeoid genera from drier habitats of the southwestern USA. The tribe Ardellini, new tribe, is erected to accommodate the unusual genus.

After a few centuries with entomologists scouring the continent, the discovery of unknown Nearctic scarab gen­era is no longer commonplace. The western United States, in particular, is biogeographically diverse with pockets of endemism that makes such discoveries still possible, driving collectors to continue sampling …

New Larval Host Plants And Ecological Observations On North American Cerambycidae (Coleoptera), Josef Vlasak, Katerina Vlasakova

Insecta Mundi

New larval hosts are presented for 152 North American Cerambycidae (Coleoptera). Larval host plants of Aneflus calvatus Horn in Leng, Aneflomorpha arizonica Linsley, Aneflomorpha fisheri Linsley, Ane­flomorpha opacicornis Linsley, Anelaphus magnipunctatus (Knull), Atylostagma glabra Schaeffer, Cacophrissus pauper Bates, Elytroleptus limpianus Skiles and Chemsak, Obrium rubidum LeConte, and Stenelytrana splen­dens (Knull) are reported for the first time. The types of wood utilized by larvae of Leptorhabdium pictum (Haldeman), Sphenostethus taslei (Buquet), Typocerus lugubris (Say), and Xestoleptura octonotata (Say) are discussed. Notes on larval morphology and larval habits of Aneflus spp. and Stenaspis solitaria (Say), includ­ing a correction of a published host …

Nesting Behavior, Ecology, And Functional Morphology Of The Trapdoor Spider-Hunting Spider Wasp Aporus (Plectraporus) Hirsutus (Banks) (Hymenoptera: Pompilidae), Frank E. Kurczewski, Alice J. Abela, Rick C. West

Insecta Mundi

Macrophotographs in series taken by Alice Abela on sandy coastal dunes in Santa Barbara and San Luis Obispo Counties, CA in 2010–2021 supplement and enhance F. X. Williams (1928) study of the ecol­ogy and nesting behavior of the trapdoor spider-hunting spider wasp Aporus (Plectraporus) hirsutus (Banks) (Hymenoptera: Pompilidae: Aporini). Abela’s macrophotographs and observations provide new details of adult wasp feeding, functional morphology, hunting, digging and prey transport, and host spider trapdoor, entrance, burrow structure, host capture and escape activity. Newly reported host records from this study and online photographs expand A. hirsutus host selection in the large wafer-lid …

Biologic Tnf-Α Inhibitors Reduce Microgliosis, Neuronal Loss, And Tau Phosphorylation In A Transgenic Mouse Model Of Tauopathy, Weijun Ou, Joshua Yang, Juste Simanauskaite, Matthew Choi, Demi M. Castellanos, Rudy Chang, Jiahong Sun, Nataraj Jagadeesan, Karen D. Parfitt, David H. Cribbs, Rachita K. Sumbria

Pharmacy Faculty Articles and Research

Background

Tumor necrosis factor-α (TNF-α) plays a central role in Alzheimer’s disease (AD) pathology, making biologic TNF-α inhibitors (TNFIs), including etanercept, viable therapeutics for AD. The protective effects of biologic TNFIs on AD hallmark pathology (Aβ deposition and tau pathology) have been demonstrated. However, the effects of biologic TNFIs on Aβ-independent tau pathology have not been reported. Existing biologic TNFIs do not cross the blood–brain barrier (BBB), therefore we engineered a BBB-penetrating biologic TNFI by fusing the extracellular domain of the type-II human TNF-α receptor (TNFR) to a transferrin receptor antibody (TfRMAb) that ferries the TNFR into the brain via …

Phenological And Social Characterization Of Three Lasioglossum (Dialictus) Species Inferred From Long-Term Trapping Collections, Lyllian A.-J. Corbin, David N. Awde, Miriam H. Richards

Entomology Faculty Publications

Detailed social and phenological data collected from nesting aggregations exist for relatively few sweat bee species because nesting aggregations are rarely found in large numbers, even when local populations are highly abundant. This limits researchers’ abilities to assess the social status of many species, which in turn, limits our ability to trace the sequence of evolutionary steps between alternative social states. To address this problem, we demonstrate the utility of rehydrated, pinned specimens from pan trap and netting collections for generating inferences about the phenology and social status of a well-studied sweat bee species, Lasioglossum (Dialictus) laevissimum. …

Nutritional Status Of Children Living Within Institution-Based Care: A Retrospective Analysis With Funnel Plots And Control Charts For Programme Monitoring, Emily Delacey, Evan Hilberg, Elizabeth Allen, Michael Quiring, Cally J. Tann, Nora Ellen Groce, James Vilus, Ethan A. Bergman, Merzel Demasu-Ay, Hang T. Dam, Marko Kerac

All Faculty Scholarship for the College of Education and Professional Studies

Objectives The aim of this study is to fill a key information gap on the nutrition-related epidemiology of orphaned and vulnerable children living within institution-based care (IBC) across six countries.

Design A retrospective analysis with Shewhart control charts and funnel plots to explore intersite and over time variations in nutritional status.

Setting We conducted a retrospective analysis of records from Holt International’s Child Nutrition Programme from 35 sites in six countries; Mongolia, India, Ethiopia, Vietnam, China and the Philippines.

Participants Deidentified health records from Holt International’s online nutrition screening database included records from 2926 children, 0–18 years old. Data were …

Inhibition Of Bruton Tyrosine Kinase Reduces Neuroimmune Cascade And Promotes Recovery After Spinal Cord Injury, Chen Guang Yu, Vimala Bondada, Hina Iqbal, Kate L. Moore, John C. Gensel, Subbarao Bondada, James W. Geddes

Physiology Faculty Publications

Microglia/astrocyte and B cell neuroimmune responses are major contributors to the neurological deficits after traumatic spinal cord injury (SCI). Bruton tyrosine kinase (BTK) activation mechanistically links these neuroimmune mechanisms. Our objective is to use Ibrutinib, an FDA-approved BTK inhibitor, to inhibit the neuroimmune cascade thereby improving locomotor recovery after SCI. Rat models of contusive SCI, Western blot, immunofluorescence staining imaging, flow cytometry analysis, histological staining, and behavioral assessment were used to evaluate BTK activity, neuroimmune cascades, and functional outcomes. Both BTK expression and phosphorylation were increased at the lesion site at 2, 7, 14, and 28 days after SCI. Ibrutinib …

Implications Of Salinity Normalization Of Seawater Total Alkalinity In Coral Reef Metabolism Studies, Travis A. Courtney, Tyler Cyronak, Alyssa J. Griffin, Andreas J. Andersson

Marine & Environmental Sciences Faculty Articles

Salinity normalization of total alkalinity (TA) and dissolved inorganic carbon (DIC) data is commonly used to account for conservative mixing processes when inferring net metabolic modification of seawater by coral reefs. Salinity (S), TA, and DIC can be accurately and precisely measured, but salinity normalization of TA (nTA) and DIC (nDIC) can generate considerable and unrecognized uncertainties in coral reef metabolic rate estimates. While salinity normalization errors apply to nTA, nDIC, and other ions of interest in coral reefs, here, we focus on nTA due to its application as a proxy for net coral reef calcification and the importance for …

Application Of A Bacteriophage–Sanitizer Combination In Post-Harvest Control Of E. Coli O157:H7 Contamination On Spinach Leaves In The Presence Or Absence Of A High Organic Load Produce Wash, Badrinath Vengarai Jagannathan, Steven Kitchens, Stuart Price, Melissa Morgan, Paul Priyesh Vijayakumar

Animal and Food Sciences Faculty Publications

Foodborne illness due to the consumption of contaminated products continues to be a serious public health issue. Bacteriophages might provide a natural and effective way to control and reduce the pathogenic bacterial population on food products. Researchers have conducted various experiments to prove their effectiveness against different pathogens and their ability to act as a natural intervention to control pathogen populations, especially in the food industry. In this study, a cocktail of bacteriophages (phages) was added to wash water in the presence of a high organic load along with commercially used sanitizers (chlorine or Sanidate 5.0) to study the efficacy …

A Mathematical Model For Transport And Growth Of Microbes In Unsaturated Porous Soil, Harihar Khanal, Andrei Ludu, Ramesh Chandra Timsina, Kedar Nath Uprety

Publications

In this work, we develop a mathematical model for transport and growth of microbes by natural (rain) water infiltration and flow through unsaturated porous soil along the vertical direction under gravity and capillarity by coupling a system of advection diffusion equations (for concentration of microbes and their growth-limiting substrate) with the Richards equation. (e model takes into consideration several major physical, chemical, and biological mechanisms. (e resulting coupled system of PDEs together with their boundary conditions is highly nonlinear and complicated to solve analytically. We present both a partial analytic approach towards solving the nonlinear system and finding the main …

Novel Biomarkers Of Ciliary Extracellular Vesicles Interact With Ciliopathy And Alzheimer’S Associated Proteins, Ashraf M. Mohieldin, Amal Alachkar, John R. Yates Iii, Surya M. Nauli

Pharmacy Faculty Articles and Research

Ciliary extracellular vesicles (ciEVs), released from primary cilia, contain functional proteins that play an important role in cilia structure and functions. We have recently shown that ciEVs and cytosolic extracellular vesicles (cyEVs) have unique and distinct biomarkers. While ciEV biomarkers have shown some interactions with known ciliary proteins, little is known about the interaction of ciEV proteins with proteins involved in ciliopathy and neurodegenerative disorders. Here, we reveal for the first time the protein-protein interaction (PPI) between the top five ciEVs biomarkers with ciliopathy and Alzheimer disease (AD) proteins. These results support the growing evidence of the critical physiological roles …

Nutritional And Physiological Constraints Contributing To Limitations In Small Intestinal Starch Digestion And Glucose Absorption In Ruminants, Ronald J. Trotta, David L. Harmon, James C. Matthews, Kendall C. Swanson

Animal and Food Sciences Faculty Publications

Increased efficiency of nutrient utilization can potentially be gained with increased starch digestion in the small intestine in ruminants. However, ruminants have quantitative limits in the extent of starch disappearance in the small intestine. The objective is to explore the nutritional and physiological constraints that contribute to limitations of carbohydrate assimilation in the ruminant small intestine. Altered digesta composition and passage rate in the small intestine, insufficient pancreatic α-amylase and/or small intestinal carbohydrase activity, and reduced glucose absorption could all be potentially limiting factors of intestinal starch assimilation. The absence of intestinal sucrase activity in ruminants may be related to …

Influence Of Prolonged Serotonin And Ergovaline Pre-Exposure On Vasoconstriction Ex Vivo, Eriton E. L. Valente, David L. Harmon, James L. Klotz

Animal and Food Sciences Faculty Publications

Ergot alkaloid mycotoxins interfere in many functions associated with serotonergic neurotransmitters. Therefore, the objective was to evaluate whether the association of serotonin (5-hydroxytryptamine, 5-HT) and ergot alkaloids during a 24 h pre-incubation could affect the vascular contractile response to ergot alkaloids. To evaluate the effects of 24 h exposure to 5-HT and ergot alkaloids (ergovaline, ERV), two assays were conducted. The first assay determined the half-maximal inhibitory concentration (IC₅₀)following the 24 h pre-exposure period, while the second assay evaluated the effect of IC₅₀ concentrations of 5-HT and ERV either individually or in combination. There was an interaction …

Likely Community Transmission Of Covid-19 Infections Between Neighboring, Persistent Hotspots In Ontario, Canada, Ben C. Shirley, Eliseos J. Mucaki, Peter Rogan

Biochemistry Publications

Introduction: This study aimed to produce community-level geo-spatial mapping of confirmed COVID-19 cases in Ontario Canada in near real-time to support decision-making. This was accomplished by area-to-area geostatistical analysis, space-time integration, and spatial interpolation of COVID-19 positive individuals.
Methods: COVID-19 cases and locations were curated for geostatistical analyses from March 2020 through June 2021, corresponding to the first, second, and third waves of infections. Daily cases were aggregated according to designated forward sortation area (FSA), and postal codes (PC) in municipal regions Hamilton, Kitchener/Waterloo, London, Ottawa, Toronto, and Windsor/Essex county. Hotspots were identified with area-to-area tests including Getis-Ord Gi*, Global …

Affective Computing For Late-Life Mood And Cognitive Disorders, Erin Smith, Eric A. Storch, Ipsit Vahia, Stephen T.C. Wong, Helen Lavretsky, Jeffrey L. Cummings, Harris A. Eyre

Brain Health Faculty Publications

Affective computing (also referred to as artificial emotion intelligence or emotion AI) is the study and development of systems and devices that can recognize, interpret, process, and simulate emotion or other affective phenomena. With the rapid growth in the aging population around the world, affective computing has immense potential to benefit the treatment and care of late-life mood and cognitive disorders. For late-life depression, affective computing ranging from vocal biomarkers to facial expressions to social media behavioral analysis can be used to address inadequacies of current screening and diagnostic approaches, mitigate loneliness and isolation, provide more personalized treatment approaches, and …

Evaluation Of Salmonella Biofilm Cell Transfer From Common Food Contact Surfaces To Beef Products, Rong Wong, David A. King, Norasak Kalchayanand

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Meat contamination by Salmonella enterica is a serious public health concern. Available data have suggested that biofilm formation at processing plants and contaminated contact surfaces might contribute to meat contamination. Because transfer from contact surfaces to food products via direct contact has been deemed the most common bacteria transmission route that can lead to contamination, we evaluated the effect of Salmonella biofilm forming ability, contact surface material, and beef surface tissue type on Salmonella biofilm transfer from hard surfaces to beef products. Salmonella biofilms developed on the common contact surfaces stainless steel (SS) and polyvinylchloride (PVC) were transferred consecutively via …

Sharing The Salt Bowl: Counterion Identity Drives N-Alkyl Resorcinarene Affinity For Pyrophosphate In Water, Kwaku Twum, Seyed Iraj Sadraei, Jordan Feder, S. Maryamdokht Taimoory, Kari Rissanen, John F. Trant, Ngong Kodiah Beyeh

Chemistry and Biochemistry Publications

N-Alkyl ammonium resorcinarene chloride receptors, NARX4, have been shown to act as high-sensitivity detectors of pyrophosphate (PPi), a biomarker of disease, in aqueous media through the chloride-to-PPi exchange [NAR(Cl)4 to NARPPi]. The nature of the anion of the macrocyclic NARX4 (X = Cl−, Br−, triflate OTf−) receptor greatly influences the PPi-affinity in aqueous media. The binding affinity for [NAR (Cl)4] is 3.61 × 105 M−1, while the NAR (Br)4 and NAR (OTf)4 show stronger binding of 5.30 × 105 M−1, and 6.10 × 105 M−1, respectively. The effects of upper rim ammonium cation, –N+H2R substituents (R = 3-hydroxypropyl, cyclohexyl, …

High-Resolution Cryo-Electron Microscopy Structure Of Photosystem Ii From The Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803, Christopher J. Gisriel, Jimin Wang, Jinchan Liu, David A. Flesher, Krystle M. Reiss, Hao-Li Huang, Ke R. Yang, William H. Armstrong, M. R. Gunner, Victor S. Batista, Richard J. Debus, Gary W. Brudvig

Publications and Research

Photosystem II (PSII) enables global-scale, light-driven water oxidation. Genetic manipulation of PSII from the mesophilic cyanobacterium Synechocystis sp. PCC 6803 has provided insights into the mechanism of water oxidation; however, the lack of a highresolution structure of oxygen-evolving PSII from this organism has limited the interpretation of biophysical data to models based on structures of thermophilic cyanobacterial PSII. Here, we report the cryo-electron microscopy structure of PSII from Synechocystis sp. PCC 6803 at 1.93-Å resolution. A number of differences are observed relative to thermophilic PSII structures, including the following: the extrinsic subunit PsbQ is maintained, the C terminus of the …

Bactericidal Effects And Stability Of Ll-37 And Cama In The Presence Of Human Lung Epithelial Cells, Regina Geitani, Carole Ayoub Moubareck, Floriane Costes, Léa Marti, Gabrielle Dupuis, Dolla Karam Sarkis, Lhousseine Touqui

All Works

Cationic antimicrobial peptides (CAMPs) are important actors in host innate immunity and represent a promising alternative to combat antibiotic resistance. Here, the bactericidal activity of two CAMPs (LL-37, and CAMA) was evaluated against Pseudomonas aeruginosa (PA) in the presence of IB3-1 cells, a cell line derived from patients with cystic fibrosis. The two CAMPs exerted different effects on PA survival depending on the timing of their administration. We observed a greater bactericidal effect when IB3-1 cells were pretreated with sub-minimum bactericidal concentrations (Sub-MBCs) of the CAMPs prior to infection. These findings suggest that CAMPs induce the production of factors by …

The Effects Of Boric Acid Sugar Bait On Wolbachia Trans-Infected Male Aedes Albopictus (Zap Males®) In Laboratory Conditions, Vindhya S. Aryaprema, Whitney A. Qualls, Karen L. Dobson, Stephen L. Dobson, Rui-De Xue

Entomology Faculty Publications

The field release of Wolbachia trans-infected male mosquitoes, as well as the use of toxic sugar baits, is a novel and promising candidate technique for integrated mosquito management programs. However, the methods of action of the two techniques may not be complementary, because the Wolbachia method releases mosquitoes into the environment expecting a wild population reduction in subsequent generations while the toxic baits are intended to reduce the wild population by killing mosquitoes. This laboratory study was conducted to evaluate the effectiveness of boric acid toxic sugar baits on Wolbachia trans-infected male Aedes albopictus, relative to wild-type Ae. albopictus …

Adipose-Specific Pparα Knockout Mice Have Increased Lipogenesis By Pask–Srebp1 Signaling And A Polarity Shift To Inflammatory Macrophages In White Adipose Tissue, Terry D. Hinds, Jr., Zachary A. Kipp, Mei Xu, Frederique B. Yiannikouris, Andrew J. Morris, Donald F. Stec, Walter Wahli, David E. Stec

Pharmacology and Nutritional Sciences Faculty Publications

The nuclear receptor PPARα is associated with reducing adiposity, especially in the liver, where it transactivates genes for β-oxidation. Contrarily, the function of PPARα in extrahepatic tissues is less known. Therefore, we established the first adipose-specific PPARα knockout (Ppara^FatKO) mice to determine the signaling position of PPARα in adipose tissue expansion that occurs during the development of obesity. To assess the function of PPARα in adiposity, female and male mice were placed on a high-fat diet (HFD) or normal chow for 30 weeks. Only the male Ppara^FatKO animals had significantly more adiposity in the inguinal white …

Genetic Contributors Of Incident Stroke In 10,700 African Americans With Hypertension: A Meta-Analysis From The Genetics Of Hypertension Associated Treatments And Reasons For Geographic And Racial Differences In Stroke Studies, Nicole D. Armstrong, Vinodh Srinivasasainagendra, Amit Patki, Rikki M. Tanner, Bertha A. Hidalgo, Hemant K. Tiwari, Nita A. Limdi, Ethan M. Lange, Leslie A. Lange, Donna K. Arnett, Marguerite R. Irvin

Epidemiology and Environmental Health Faculty Publications

Background: African Americans (AAs) suffer a higher stroke burden due to hypertension. Identifying genetic contributors to stroke among AAs with hypertension is critical to understanding the genetic basis of the disease, as well as detecting at-risk individuals.

Methods: In a population comprising over 10,700 AAs treated for hypertension from the Genetics of Hypertension Associated Treatments (GenHAT) and Reasons for Geographic and Racial Differences in Stroke (REGARDS) studies, we performed an inverse variance-weighted meta-analysis of incident stroke. Additionally, we tested the predictive accuracy of a polygenic risk score (PRS) derived from a European ancestral population in both GenHAT and REGARDS AAs …

Nondestructive Detection Of Codling Moth Infestation In Apples Using Pixel-Based Nir Hyperspectral Imaging With Machine Learning And Feature Selection, Nader Ekramirad, Alfadhl Y. Khaled, Lauren E. Doyle, Julia R. Loeb, Kevin D. Donohue, Raul T. Villanueva, Akinbode A. Adedeji

Electrical and Computer Engineering Faculty Publications

Codling moth (CM) (Cydia pomonella L.), a devastating pest, creates a serious issue for apple production and marketing in apple-producing countries. Therefore, effective nondestructive early detection of external and internal defects in CM-infested apples could remarkably prevent postharvest losses and improve the quality of the final product. In this study, near-infrared (NIR) hyperspectral reflectance imaging in the wavelength range of 900–1700 nm was applied to detect CM infestation at the pixel level for three organic apple cultivars, namely Gala, Fuji and Granny Smith. An effective region of interest (ROI) acquisition procedure along with different machine learning and data processing …