Life Sciences Commons^™

Wavelet-Based Genomic Signal Processing For Centromere Identification And Hypothesis Generation, Deborah Weighill, David Macaua-Sanz, Stephen Paul Difiazio, Wayne Joubert, Manesh Shah, Jeremy Schmutz, Avinash Sreedasyam, Gerald Tuska, Daniel Jacobson

Faculty & Staff Scholarship

Various ‘omics data types have been generated for Populus trichocarpa, each providing a layer of information which can be represented as a density signal across a chromosome. We make use of genome sequence data, variants data across a population as well as methylation data across 10 different tissues, combined with wavelet-based signal processing to perform a comprehensive analysis of the signature of the centromere in these different data signals, and successfully identify putative centromeric regions in P. trichocarpa from these signals. Furthermore, using SNP (single nucleotide polymorphism) correlations across a natural population of P. trichocarpa, we find evidence for the …

Genome-Wide Association Study Identifies Genomic Loci Affecting Filet Firmness And Protein Content In Rainbow Trout, Ali Ali, Rafet Al-Tobasei, Daniela Lourenco, Tim Leeds, Brett Kenney, Mohamed Saleem

Faculty & Staff Scholarship

Filet quality traits determine consumer satisfaction and affect profitability of the aquaculture industry. Soft flesh is a criterion for fish filet downgrades, resulting in loss of value. Filet firmness is influenced by many factors, including rate of protein turnover. A 50K transcribed gene SNP chip was used to genotype 789 rainbow trout, from two consecutive generations, produced in the USDA/NCCCWA selective breeding program. Weighted single-step GBLUP (WssGBLUP) was used to perform genome-wide association (GWA) analyses to identify quantitative trait loci affecting filet firmness and protein content. Applying genomic sliding windows of 50 adjacent SNPs, 212 and 225 SNPs were associated …

Ancient Polyploidy And Genome Evolution In Palms, Craig F. Barrett, Michael R. Mckain, Brandon T. Sinn, Xue Jun Ge, Yuqu Zhang, Alexandre Antonelli, Christine D. Bacon

Faculty & Staff Scholarship

Mechanisms of genome evolution are fundamental to our understanding of adaptation and the generation and maintenance of biodiversity, yet genome dynamics are still poorly characterized in many clades. Strong correlations between variation in genomic attributes and species diversity across the plant tree of life suggest that polyploidy or other mechanisms of genome size change confer selective advantages due to the introduction of genomic novelty. Palms (order Arecales, family Arecaceae) are diverse, widespread, and dominant in tropical ecosystems, yet little is known about genome evolution in this ecologically and economically important clade. Here, we take a phylogenetic comparative approach to investigate …

Differential Responses Of Net N Mineralization And Nitrification To Throughfall Reduction In A Castanopsis Hystrix Plantation In Southern China, Li Chen, Yuanguang Wen, Ji Zeng, Hui Wang, Jingxin Wang, Bernard Dell, Shirong Liu

Faculty & Staff Scholarship

Background

Many regions in the world are experiencing changes in precipitation pattern, which likely impact soil nitrogen cycling and availability. However, we know little about how soil nitrogen processes respond to drought stress under climate change.

Methods

A continuous 5-year experiment of throughfall reduction treatment (TRT) was conducted in a Castanopsis hystrix plantation in subtropical China to assess how soil nitrogen processes responded to a change in precipitation. Net nitrogen transformation, soil properties, microbial biomass carbon (MBC) and nitrogen (MBN), and microbial community phospholipid fatty acids (PLFAs as bacteria, fungi and arbuscular mycorrhizal fungi (AMF)) were investigated in the wet …

Cooking Frequency Associated With Dietary Quality In Icook-4h Youth Participants At Baseline, Amber D. Ford, Sarah E. Colby, Marissa Mcelrone, Lisa Franzen-Castle, Melissa D. Olfert

Faculty & Staff Scholarship

Background: Increased intakes of ready-made and fast foods paralleled with decreased homemade food consumption have been associated with increased rates of obesity. Researchers have shown associations between cooking self-efficacy (SE) and cooking frequency (CF) with dietary quality and weight status. Some cooking interventions have shown positive associations with dietary outcomes, such as increased fruit and vegetable intake and decreased fast food consumption. There is still much unknown about SE and CF, especially among youth. Objective: Determine baseline SE and CF and the associations with dietary quality and body mass index (BMI) of youth enrolled in iCook 4H. Methods: Youth (n=228, …

The Identification Of Differentially Expressed Genes Between Extremes Of Placental Efficiency In Maternal Line Gilts On Day 95 Of Gestation, Shanice K. Krombeen, Vijay Shankar, Rooksana E. Noorai, Christopher A. Saski, Julia L. Sharp, Matthew E. Wilson, Tiffany A. Wilmoth

Faculty & Staff Scholarship

Background: Placental efficiency (PE) describes the relationship between placental and fetal weights (fetal wt/placental wt). Within litters, PE can vary drastically, resulting in similarly sized pigs associated with differently sized placentas, up to a 25% weight difference. However, the mechanisms enabling the smaller placenta to grow a comparable littermate are unknown. To elucidate potential mechanisms, morphological measurements and gene expression profiles in placental and associated endometrial tissues of high PE and low PE feto-placental units were compared. Tissue samples were obtained from eight maternal line gilts during gestational day 95 ovario-hysterectomies. RNA was extracted from tissues of feto-placental units with …

Portable X-Ray Fluorescence Spectroscopy For Rapid And Cost-Effective Determination Of Elemental Composition Of Ground Forage, Yadav Sapkota, Louis M. Mcdonald, Thomas C. Griggs, Thomas J. Basden, Brandon Lee Drake

Faculty & Staff Scholarship

The recent development of portable X-ray fluorescence spectrometers (PXRF) has created new avenues for rapid plant elemental concentration determination at reduced cost while avoiding hazardous chemicals. A few studies have indicated the potential use of PXRF for homogenous plant tissue analysis. However, there is a lack of information for analysis of heterogeneous plant samples like livestock forage, which consists of a mixture of several species and plant parts, each varying in elemental concentration. Our objective was to evaluate PXRF for forage analysis, specifically the effect of forage particle size and scan time on important elements including P, K, Ca, and …

Appalachian Economic Futures, Dewayne Barton, John Deskins, Paul Corbit Brown, William Hal Gorby, Jill Moles Mullins, Nicholas F. Stump, Matt Winans, Brenden E. Mcneil, Eloise Elliott, Chris Haddox, E Gordon Gee, Eddie Brzostek, Audra Slocum, Trevor Mckenzie, Tom Hansell

Exhibit Panels

When people talk about the future of Appalachia, they typically mean economic futures: What will happen to coal jobs? How will Appalachia diversify its economy? What about poverty? Stereotypes about our region represent our people as disinterested in education, and hostile to innovation, technology, and sustainability. We see a different story. This part of the exhibit looks at ways that Appalachians are taking their strong sense of culture, their linguistic distinctiveness, and their relationship to the natural world to imagine new futures in diverse industries, sustainable practices, and stronger education systems.

Activation Of Adenosine A2a But Not A2b Receptors Is Involved In Uridine Adenosine Tetraphosphate-Induced Porcine Coronary Smooth Muscle Relaxation, Changyan Sun, Tong Jiao, Daphne Merkus, Dirk J. Duncker, S. Jamal Mustafa, Zhichao Zhou

Faculty & Staff Scholarship

Activation of both adenosine A2A and A2B receptors (A2BR) contributes to coronary vasodilation. We previously demonstrated that uridine adenosine tetraphosphate (Up4A) is a novel vasodilator in the porcine coronary microcirculation, acting mainly on A2AR in smooth muscle cells (SMC). We further investigated whether activation of A2BR is involved in Up4A-mediated coronary SMC relaxation. Both A2AR and A2BR may stimulate H2O2 production leading to activation of KATP channels in SMCs, we also studied the involvement of H2O2 and KATP channels in Up4A-mediated effect. Coronary small arteries dissected from the apex of porcine hearts were mounted on wire myograph for Up4A concentration …

Comparative Genomic Analysis Of Six Glossina Genomes, Vectors Of African Trypanosomes, Geoffrey M. Attardo, Adly M. M. Abd-Alla, Alvaro Acosta-Serrano, James E. Allen, Rosemary Bateta, Joshua B. Benoit, Kostas Bourtzis, Jelle Caers, Guy Caljon, Mikkel B. Christensen, David W. Farrow, Markus Friedrich, Aurélie Hua-Van, Emily C. Jennings, Denis M. Larkin, Daniel Lawson, Michael J. Lehane, Vasileios P. Lenis, Ernesto Lowy-Gallego, Rosaline W. Macharia, Anna R. Malacrida, Heather G. Marco, Daniel Masiga, Gareth L. Maslen, Irina Matetovic, Richard P. Meisel, Irene Meki, Veronika Michalkova, Wolfgang J. Miller, Patrick Minx, Paul O. Mireji, Lino Ometto, Andrew G. Parker, Rita Rio, Clair Rose, Andrew J. Rosendale, Omar Rota-Stabelli, Grazia Savini, Liliane Schoofs, Francesca Scolari, Martin T. Swain, Peter Takáč, Chad Tomlinson, George Tsiamis, Jan Van Abbeele, Aurelien Vigneron, Jingwen Wang, Wesley C. Warren, Robert M. Waterhouse, Mathew T. Weirauch, Brian L. Weiss, Richard K. Wilson, Xin Zhao, Serap Aksoy

Faculty & Staff Scholarship

Background: Tsetse flies (Glossina sp.) are the vectors of human and animal trypanosomiasis throughout subSaharan Africa. Tsetse flies are distinguished from other Diptera by unique adaptations, including lactation and the birthing of live young (obligate viviparity), a vertebrate blood-specific diet by both sexes, and obligate bacterial symbiosis. This work describes the comparative analysis of six Glossina genomes representing three sub-genera: Morsitans (G. morsitans morsitans, G. pallidipes, G. austeni), Palpalis (G. palpalis, G. fuscipes), and Fusca (G. brevipalpis) which represent different habitats, host preferences, and vectorial capacity. Results: Genomic analyses validate established evolutionary relationships and sub-genera. Syntenic analysis of Glossina relative …

Influence Of Climate Change And Postdelisting Management On Long‐Term Population Viability Of The Conservation‐Reliant Kirtland's Warbler, Donald J. Brown, Deahn M. Donner, Christine A. Ribic, Carol I. Bocetti

Faculty & Staff Scholarship

Rapid global climate change is resulting in novel abiotic and biotic conditions and in‐ teractions. Identifying management strategies that maximize probability of long‐term persistence requires an understanding of the vulnerability of species to environmen‐ tal changes. We sought to quantify the vulnerability of Kirtland's Warbler (Setophaga kirtlandii), a rare Neotropical migratory songbird that breeds almost exclusively in the Lower Peninsula of Michigan and winters in the Bahamian Archipelago, to pro‐ jected environmental changes on the breeding and wintering grounds. We devel‐ oped a population‐level simulation model that incorporates the influence of annual environmental conditions on the breeding and wintering grounds, …

The Regulatory Landscape Of A Core Maize Domestication Module Controlling Bud Dormancy And Growth Repression, Zhaobin Dong, Yuguo Xiao, Rajanikanth Govindarajulu, Regina Feil, Muriel L. Siddoway, Torrey Nielsen, John E. Lunn, Jennifer Hawkins, Clinton Whipple, George Chuck

Faculty & Staff Scholarship

Many domesticated crop plants have been bred for increased apical dominance, displaying greatly reduced axillary branching compared to their wild ancestors. In maize, this was achieved through selection for a gain-of-function allele of the TCP transcription factor teosinte branched1 (tb1). The mechanism for how a dominant Tb1 allele increased apical dominance, is unknown. Through ChIP seq, RNA seq, hormone and sugar measurements on 1 mm axillary bud tissue, we identify the genetic pathways putatively regulated by TB1. These include pathways regulating phytohormones such as gibberellins, abscisic acid and jasmonic acid, but surprisingly, not auxin. In addition, metabolites involved in sugar …

Development Of Multifunctional Overhauser-Enhanced Magnetic Rresonance Imaging For Concurrent In Vivo Mapping Of Tumor Interstitial Oxygenation, Acidosis And Inorganic Phosphate Concentration, Artem A. Gorodetskii, Timothy D. Eubank, Benoit Driesschaert, Martin Poncelet, Emily Ellis, Valery V. Khramtsov, Andrey A. Bobko

Faculty & Staff Scholarship

Tumor oxygenation (pO2), acidosis (pH) and interstitial inorganic phosphate concentration (Pi) are important parameters of the malignant behavior of cancer. A noninvasive procedure that enables visualization of these parameters may provide unique information about mechanisms of tumor pathophysiology and provide clues to new treatment targets. In this research, we present a multiparametric imaging method allowing for concurrent mapping of pH, spin probe concentration, pO2, and Pi using a single contrast agent and Overhauser-enhanced magnetic resonance imaging technique. The developed approach was applied to concurrent multifunctional imaging in phantom samples and in vivo in a mouse model of …

Planning Emergency Shelters For Urban Disasters: A Multi-Level Location–Allocation Modeling Approach, Yijun Shi, Guofang Zhai, Lihua Xu, Quan Zhu, Jinyang Deng

Faculty & Staff Scholarship

In recent years, cities are threatened by various natural hazards. Planning emergency shelters in advance is an effective approach to reducing the damage caused by disasters and ensuring the safety of residents. Thus, providing the optimal layout of urban emergency shelters is an important stage of disaster management and an act of humanitarian logistics. In order to study the optimal layout of emergency shelters in small mountain cities, this paper constructs multi-level location models for different grades of emergency shelters so as to minimize the travel and construction costs and maximize the coverage rate. Specifically, the actual service of emergency …

A New Transgenic Reporter Line Reveals Wnt-Dependent Snai2 Re-Expression And Cranial Neural Crest Differentiation In Xenopus, Jiejing Li, Mark Perfetto, Christopher Materna, Rebecca Li, Hong Thi Tran, Kris Vleminckx, Melinda K. Duncan, Shuo Wei

Faculty & Staff Scholarship

During vertebrate embryogenesis, the cranial neural crest (CNC) forms at the neural plate border and subsequently migrates and diferentiates into many types of cells. The transcription factor Snai2, which is induced by canonical Wnt signaling to be expressed in the early CNC, is pivotal for CNC induction and migration in Xenopus. However, snai2 expression is silenced during CNC migration, and its roles at later developmental stages remain unclear. We generated a transgenic X. tropicalis line that expresses enhanced green fuorescent protein (eGFP) driven by the snai2 promoter/enhancer, and observed eGFP expression not only in the pre-migratory and migrating CNC, but …

Characterization And Localization Of Cyclin B3 Transcript In Both Oocyte And Spermatocyte Of The Rainbow Trout (Oncorhynchus Mykiss), Wenzhi Guan, Liangjie Qiu, Bo Zhang, Jianbo Yao, Qing Xiao, Gaofeng Qiu

Faculty & Staff Scholarship

B-type cyclins are regulatory subunits with distinct roles in the cell cycle. To date, at least three subtypes of B-type cyclins (B1, B2, and B3) have been identified in vertebrates. Previously, we reported the characterization and expression profiles of cyclin B1 and B2 during gametogenesis in the rainbow trout (Oncorhynchus mykiss). In this paper, we isolated another subtype of cyclin B, cyclin B3 (CB3), from a cDNA library of the rainbow trout oocyte. The full-length CB3 cDNA (2,093 bp) has an open reading frame (1,248 bp) that encodes a protein of 416 amino acid residues. The CB3 transcript …

Uncovering The Signaling Landscape Controlling Breast Cancer Cell Migration Identifies Novel Metastasis Driver Genes, Esmee Koedoot, Michiel Fokkelman, Vasiliki-Maria Rogkoti, Marcel Smid, Iris Van De Sandt, Hans De Bont, Chantal Pont, Janna E. Klip, Steven Wink, Mieke A. Timmermans, Erik A. C. Wiemer, Peter Stoilov, John A. Foekens, Sylvia E. Le Dévédec, John W. M. Martens, Bob Van De Water

Faculty & Staff Scholarship

Ttriple-negative breast cancer (TNBC) is an aggressive and highly metastatic breast cancer subtype. Enhanced TNBC cell motility is a prerequisite of TNBC cell dissemination. Here, we apply an imaging-based RNAi phenotypic cell migration screen using two highly motile TNBC cell lines (Hs578T and MDA-MB-231) to provide a repository of signaling determinants that functionally drive TNBC cell motility. We have screened ~4,200 target genes individually and discovered 133 and 113 migratory modulators of Hs578T and MDA-MB-231, respectively, which are linked to signaling networks predictive for breast cancer progression. The splicing factors PRPF4B and BUD31 and the transcription factor BPTF are essential …

West Virginia Food Dessert Summit Program, West Virginia University Davis College Of Agriculture, Natural Resources And Design, West Virginia University School Of Public Health, West Virginia University Extension Service, Wvu Foundation, Usda Natural Resources Conservation Service

West Virginia Food Desert Summit 2019

Program from the 2019 West Virginia Food Desert Summit, held in Bridgeport, WV on December 10, 2019.

Role Of Geographic Distance In Clonal Propagation Of Asimina Triloba Subpopulations Of Northern West Virginia, Kari Fontana

Undergraduate Student Research

Clonality prevails as reproductive strategy of choice in several plant species, including Asimina triloba. More commonly known as the North American Paw Paw tree, this plant yields high domestication potential and well as scientific value. Clonality and inbreeding are highly common in Paw Paw which can pose a threat to the species’ success due the effect on genetic variation. The goal of this experiment was to examine geographic distance in the context of clonality by determining the number of individuals and clones within and among subpopulations. Methodology includes analysis of plant genetic makeup through extraction, amplification, and iSSR analysis. Data …

Infestation Of Japanese Honeysuckle (Lonerica Japonica) Shows Variation In Soil Microbial Community Composition And Species Diversity In Wvu Core Arboretum, Jackie Mullins

Undergraduate Student Research

Invasive species are found to cause alteration of biodiversity, competition with native species, and other environment and ecological changes across the globe. Also, invasive species have economic implications. When specifically talking about invasive plant species, an important influence is soil microbes that can altered or are altered after growth of invasive plant species. One invasive plant, Lonerica japonica, is extensively spread across the globe but has had little research done, specifically in if it alters the microbes of the soil. Having L. japonica readily available in the West Virginia University Core Arboretum, soil samples were collected from sites of …

Differences In Soil Bacterial Diversity After Treatment With Benzyl Isothiocyanate, An Allelopathic Secondary Metabolite Derivative Of Alliaria Petiolata (Garlic Mustard), Samantha Pagel

Undergraduate Student Research

The species, Alliaria petiolata (garlic mustard), has overtaken the understory of North American forests for over a century, but how the plant has become invasively successful is not well understood. There is some indication that the secretion and breakdown of its allelopathic metabolic compounds, known as glucosinolates, contribute to its success. Benzyl isothiocyanate, an end product of garlic mustard glucosinolate breakdown, has been found in previous studies to inhibit seed germination and the growth of certain mycorrhizal fungi species. Soil bacterial communities, in addition to fungi, play an important role in the surrounding abiotic and biotic environment. This study aims …

Morphological And Phylogenetic Resolution Of Diplodia Spp., Emerging Canker Pathogens Of Oak (Quercus Spp.), In The United States, Savannah Lyn Ferreira

Graduate Theses, Dissertations, and Problem Reports

In Mediterranean Europe and the United States, oak species (Quercus spp.) have been in a state of declining health and vigor for the past several decades. Several biotic agents have been found to contribute to this decline to varying degrees including Phytophthora cinnamomi and Armillaria spp., both causal agents of root rots, and various insect defoliators. In the U.S., Bretziella fagacearum, the causal agent of oak wilt, has also been implicated. More recently, Diplodia corticola (Dc) and other Diplodia spp. have been implicated in causing dieback and mortality of oak species in Europe and in …

Nitrogen Self-Doped Activated Carbons Derived From Bamboo Shoots As Adsorbent For Methylene Blue Adsorption, Bingbing Mi, Jingxin Wang, Hongzhong Xiang, Fang Liang, Jianfei Yang, Zixing Feng, Tao Zhang, Wanhe Hu, Xianmiao Liu, Zhijia Liu, Benhua Fei

Faculty & Staff Scholarship

Bamboo shoots, a promising renewable biomass, mainly consist of carbohydrates and other nitrogen-related compounds, such as proteins, amino acids and nucleotides. In this work, nitrogen self-doped activated carbons derived from bamboo shoots were prepared via a simultaneous carbonization and activation process. The adsorption properties of the prepared samples were evaluated by removing methylene blue from waste water. The factors that affect the adsorption process were examined, including initial concentration, contact time and pH of methylene blue solution. The resulting that BSNC-800-4 performed better in methylene blue removal from waste water, due to its high specific surface area (2270.9 m2 g−1), …

Cerulean Warbler (Setophaga Cerulea) And Associated Species Response To Operational Silviculture In The Central Appalachian Region, Gretchen Emily Nareff

Graduate Theses, Dissertations, and Problem Reports

In this study, I assessed the response of Cerulean Warblers (Setophaga cerulea) and 5 additional songbird species to timber harvests prescribed through operational silviculture. The research took place in relatively contiguous mature deciduous forests in 4 states in the central Appalachian region—Kentucky, Pennsylvania, Virginia, and West Virginia, USA.

For the first part of the study, I collected Cerulean Warbler abundance and territory data through point counts and territory mapping, respectively. I used the point count data to model Cerulean Warbler abundance pre- and post-harvest at 5 study areas (Kentucky [n=1], Virginia [n=2], West Virginia [n=2]) and post-harvest at …

Estimating The Age Of A Bloodstain Using Droplet Digital Pcr, Kalee Rae Crampton

Graduate Theses, Dissertations, and Problem Reports

Biological evidence is extremely valuable in the investigation of a crime due to the presence of DNA. DNA evidence is considered the gold standard in court cases due to its ability to link a suspect to a piece of evidence. In addition to DNA evidence, biological stains have the potential to provide a temporal link between an individual and a crime scene. Previous studies have shown that relative rates of RNA degradation can be used in order to estimate the age of bloodstains. Here, we examined the ability of droplet digital PCR to be used in place of quantitative PCR …

Genetic Regulation Of The Elicitation Of Glyceollin Biosynthesis In Soybean, Md. Asraful Jahan

Graduate Theses, Dissertations, and Problem Reports

Glyceollin phytoalexins are the pathogen-elicited defense metabolites that belong to the isoflavonoid family of molecules of soybean (Glycine max L. Merr). Phytophthora root and stem rot of soybean caused by Phytophthora sojae is a destructive disease throughout the soybean-growing regions worldwide causing devastating economic damages (globally $1-2 billion and over $250 million in the USA) every year. Engineering soybean plants that produce higher levels of glyceollins could confer resistance against this pathogen. Glyceollins also show anticancer and neuroprotective activities in mammals, therefore they are important for agriculture and medical research. Firstly, we were interested in understanding how biotic and …

The Impact Of Tree Species, Elevated Nitrogen Deposition, Stand Age, And Environmental Factors On Herbaceous Plant Communities In A Central Appalachian Hardwood Forest, Lacey J. Smith

Graduate Theses, Dissertations, and Problem Reports

Although the herb layer represents less than 1% of the biomass of temperate forests, this layer may contain up to 90% of the plant species in the forest and can contribute up to 20% of the foliar litter, thus playing an essential role in forest biodiversity and nutrient cycling. The objectives of this study were to investigate the differences in cover, species richness, Shannon-Wiener diversity, and evenness of herb layer plants a) under tree species associated with contrasting soil nitrogen levels and b) in watersheds that vary in nitrogen deposition, stand age, and watershed aspect at the Fernow Experimental Forest …

Characterization And Quantification Of Major Flavonol Glycosides In Ramps (Allium Tricoccum), Wijdan M. Dabeek, Nik Kovinich, Callee Walsh, Melissa Ventura Marra

Faculty & Staff Scholarship

The ramp (Allium tricoccum) is a traditional plant in the eastern Appalachian Mountains. Ramps have been used in traditional medicine for their health-promoting roles in lowering blood pressure and cholesterol. Information on the chemical composition of the potentially bioactive components in ramps is limited. Therefore, the aim of this work was to characterize and quantify major flavonols in ramps. Flavonoids were extracted in 50% methanol and 3% acetic acid. Characterization was conducted using UHPLC-PDA-MS and MS/MS, and quantification was performed using UHPLC-PDA detection. The major flavonol glycosides were kaempferol sophoroside glucuronide, quercetin sophoroside glucuronide, kaempferol rutinoside glucuronide, quercetin hexoside glucuronide, …

Neural Processing Of Communication Signals: The Extent Of Sender–Receiver Matching Varies Across Species Of Apteronotus, Kathryne M. Allen, Gary Marsat

Faculty & Staff Scholarship

As communication signal properties change, through genetic drift or selective pressure, the sensory systems that receive these signals must also adapt to maintain sensitivity and adaptability in an array of contexts. Shedding light on this process helps us to understand how sensory codes are tailored to specific tasks. In a species of weakly electric fish, Apteronotus albifrons, we examined the unique neurophysiological properties that support the encoding of electrosensory communication signals that the animal encounters in social exchanges. We compare our findings to the known coding properties of the closely related species Apteronotus leptorhynchus to establish how these animals …

The Nac Family Transcription Factor Gmnac42–1 Regulates Biosynthesis Of The Anticancer And Neuroprotective Glyceollins In Soybean, Md Asraful Jahan, Brianna Harris, Matthew Lowery, Katie Coburn, Aniello M. Infante, Ryan J. Percifield, Amanda G. Ammer, Nik Kovinich

Faculty & Staff Scholarship

Background

Glyceollins are isoflavonoid-derived pathogen-inducible defense metabolites (phytoalexins) from soybean (Glycine max L. Merr) that have important roles in providing defense against pathogens. They also have impressive anticancer and neuroprotective activities in mammals. Despite their potential usefulness as therapeutics, glyceollins are not economical to synthesize and are biosynthesized only transiently and in low amounts in response to specific stresses. Engineering the regulation of glyceollin biosynthesis may be a promising approach to enhance their bioproduction, yet the transcription factors (TFs) that regulate their biosynthesis have remained elusive. To address this, we first aimed to identify novel abiotic stresses that enhance …