Life Sciences Commons^™

Distribution Of Shell-Boring Polychaetes At Shellfish Aquaculture Sites Along The Northeast Coast Of The Us, Samantha Silverbrand

Honors College

Coastal shellfish aquaculture has expanded substantially in recent years in Maine and New England as traditional wild fishery stocks have declined. As shellfish aquaculture has expanded, producers have become more concerned about marine worm pests (i.e., polychaetes) that infest cultured bivalves. In particular, worms from the genus Polydora (also known as “polydorids”) burrow into oyster and scallop shells where they feed and deposit mud. Bivalves cover over the muddy burrows creating blisters that can decrease their market value and hinder growth. Farmers and researchers have identified methods to control infestations of P. websteri, one common species of shell-boring worm. However, …

Comstock Point, Lubec, Maine - A Natural And Photographic History, Willaim H. Schlesinger, Lisa M. Dellwo

Documents from Environmental Organizations

A natural and photographic history of our lands compiled by Lisa Dellwo and Bill Schlesinger, with the help of many friends and neighbors.

Dataset For: “Shifts In Habitat, Habitat Use, And Demography Of American Lobsters In Coastal Maine Over The Past Quarter Century.”, Robert Jarrett Ii, Damian Brady, Richard Wahle, Robert Steneck

Non-Thesis Student Work

This is the dataset for the manuscript "Shifts in habitat, habitat use, and demography of American lobsters in coastal Maine over the past quarter century." Our study revisited 20 long-term monitored sites at 10 m depth along more than 320 km of the Gulf of Maine. Sampling used quadrat sampling via scuba divers. We recorded fundamental changes in lobster habitat use and distribution. The data include count, size, sex, number of claws, and shelter use of lobster in addition to substrate type, percent cover of kelp and other macroalgae. The data are included in six .csv format files: (1) data …

Driving The Workhorse: Maine’S Reliance On The Nearshore Environment, Angela Brewer

Maine Policy Review

The changing character of Maine’s coastal ecosystems has accelerated in full view of the users most reliant on nearshore habitats and the species they support. Adaptation and diversification facilitate continued harvest of Maine’s iconic ocean bounty, which supports the coastal economy despite compounding stresses from upland development, warmer and more acidic waters, and invasive species. Use intensification in the nearshore environment calls for coordinated discussions to nurture and innovate within and across habitats to preserve their longevity and sustain the people that depend on them. Recent legislative support for eelgrass and salt marsh mapping, and estuarine and marine water quality …

What Gives Me Hope, Heather M. Leslie

Maine Policy Review

The commentary focuses on the author's experiences over the last several years in Maine where she has conducted research, mentored students, and collaboratde with diverse community partners on a number of projects focused on shellfish fisheries co-management and other community-led resilience projects in coastal Maine.

The Sociocultural Significance Of Maine's Oyster Based On Media Coverage Analysis, Syeira Clark

Honors College

Throughout the last decade, the oyster aquaculture industry in Maine has boomed, with 6 million pounds of oysters being harvested in 2021, about the amount that was harvested in 2016 (Cough, 2022). According to the founders of the Maine Oyster Trail, there are over 150 oyster farms currently operating on Maine’s coast, which is about twice as many as there were in 2016 (Maine Sea Grant). With this boom in the industry has come a wave of opportunity, as well as news coverage about the shellfish. This study examines the socio-cultural significance to the state of Maine. While the oyster …

Coral Restoration: Comparisons In Space, Time, Impacts, And Costs, Allison Fargo

Honors College

Seventy-five percent of coral reefs globally face crisis due to anthropogenic disturbances, prompting heightened global coral restoration initiatives to preserve these vital ecosystems. Various regions employ diverse active coral restoration methodologies, including coral gardening, transplantation, micro-fragmentation, artificial reefs, and sexual propagation. Of these methods, coral gardening stands out as one of the most common and highly successful methods, alongside widespread transplantation practices. Restoration efforts predominantly focus on acroporids due to their relatively rapid growth and asexual fragmentation; however, a diverse range of coral species, including large, slow-growing varieties, is also employed in these endeavors. Costs vary significantly, ranging from $10,000 …

Predicting Marine Teleost Responses To Ocean Warming And Pollution, Akila Harishchandra

Electronic Theses and Dissertations

Ocean warming and pollution are two detrimental anthropogenic factors causing rapid marine ecosystem degradation recorded in the past decades. These factors alter the marine environment intolerable for many marine species, forcing them to either adapt or shift their contemporary habitat ranges to reduce the extinction risk embedded with environmental degradation. Estimating marine species’ habitat range shifts, and their potential for developing adaptive mechanisms are critical for ecosystem conservation and management, human health risk assessment, and climate change vulnerability assessments. Given that, for the first chapter of this thesis, we focused on developing a species distribution model (SDM) integrating marine species …

Biophysical Factors Impacting Sea Lice Settlement And Survival, Eleanor R. Glahn

Electronic Theses and Dissertations

Atlantic salmon (Salmo salar L.) aquaculture production in Maine is a valuable contributor to the economy, the expansion of which has been challenged by the parasitic salmon louse Lepeophtheirus salmonis. As planktonic organisms, the life of the salmon louse is primarily dictated by the physical conditions of the environment: the temperature for development time, salinity for survival, and current velocity for transport. Salmon lice are obligate parasites for whom the successful infection of a suitable host is critical to completion of their life cycle. However, little is understood about the effects of current velocity on infection success. Hydrodynamic …

Optimizing Strategies To Hydraulically Plant Atlantic Salmon Eggs Based On Fry Dispersal Patterns, Ernest J. Atkinson

Electronic Theses and Dissertations

The Gulf of Maine Distinct Population Segment of Atlantic Salmon has suffered from habitat loss and exploitation over the last century. Hatchery supplementation has prevented the extirpation of the species, but stocking methods represent tradeoffs between survival, domestication, and logistics. Egg planting, the use of eyed embryos, maximizes natural rearing opportunities which can be important for adaptation. This method, however, is logistically demanding and requires significant labor over large spatial, but short temporal, scales dictated by the ontogeny of the fish. However, the survival and dispersal behavior of Atlantic Salmon fry immediately after emergence from eggs planted in artificial nests …

Ontogeny Of Size-Specific Prey Selection And Handling Behavior Of Larval Lobster (Homarus Americanus), Evelyn M. Layland

Electronic Theses and Dissertations

The American lobster (Homarus americanus) plays an integral role in the coastal Northwest Atlantic as a benthic consumer and the target of the most valuable single-species fishery in North America. In the past decade, benthic recruitment of juvenile lobster has declined, even as egg production has increased, suggesting heightening levels of larval mortality. Recent correlative studies in the Gulf of Maine further suggest early stage larval survival may be related to the supply and composition of planktonic foods. Despite these correlative studies and the economic importance of the species, relatively little is yet known about how larval lobster …

Climate Change And An Evolving Fishery: Do Declining Maternal Size And Planktonic Foods Affect Lobster Larval Survival In The Gulf Of Maine?, Alexander J. Ascher

Electronic Theses and Dissertations

Many marine organisms exhibit bipartite life-cycles whereby reproductive adults dwell on the benthos while the larvae are pelagic. The pelagic stage is subject to mortality rates which far exceed those experienced by the organism during its benthic existence. The larval phase therefore represents an important bottleneck to larval recruitment. Small changes to survivorship in the plankton can have large consequences for subsequent year-class strength. Understanding the factors influencing successful larval recruitment is an important step towards predicting future stock abundances and maintaining healthy fisheries. The American lobster (Homarus americanus) is a large benthic crustacean which is economically and culturally important …

Expression Of The Rag-1 Gene In Larval Yellowtail Kingfish, Gabriella Peluso

Honors College

Aquaculture has taken over from capture fisheries as a primary global provider of seafood products. Seriola lalandi, or Yellowtail kingfish, has become a species of interest, as it is a fish notable for its marketability and culinary desirability. With the expansion of aquaculture and the increased amount of high-level operating facilities comes an increased risk of disease outbreaks. There are methods commonly used within these facilities for disease control, including incorporating nutritional feeds into the fishes’ diets, safe husbandry practices, and vaccinations. While these methods can be effective, they have caveats that must be considered. Adequate diets and improved …

I Ain't Afraid Of No Crab: Intertidal Gastropod Littorina Littorea Behavioral Response To Predation Risk By Carcinus Maenas, Isabelle Erin Smy

Honors College

Littorina littorea is an intertidal, invasive gastropod species common in the Gulf of Maine. In this paper, I studied the avoidance and risk-reducing behavioral responses of L. littorea to predation risk by invasive crustacean species Carcinus maenas. Avoidance and risk-reducing behavior in this study are defined by the tendency to move towards the edge and out of a simulated tide pool and the tendency to reduce feeding. The goal of this study was to determine whether the exposure to chemical cues of predators resulted in an increase in avoidance behavior, risk-reducing behavior, and a reduction in the time before the …

Evaluating Edna Metabarcoding As A Mic-Roe-Scopic Net To Catch Salmon Pathogens, Noah Burby

Honors College

Wild Atlantic salmon in the Gulf of Maine (GOM) is a Distinct Population Segment (DPS) that has been listed since 2000 as endangered by the U.S. Fish and Wildlife Service (USFWS) and the National Oceanic and Atmospheric Administration (NOAA). The current challenge is year-over-year decreases in the number of mature salmon returning to the Penobscot River for reproduction. Early detection of pathogen presence could allow for the identification of infection and the application of corrective measures. Environmental DNA (eDNA) is simply DNA that is collected from environmental samples (e.g., water, air, and soils), which consists of whole microorganisms and genetic …

Maine’S Potential To Be A Global Leader In Sustainable Seaweed Harvesting And Management, Hannah M. Webber, Stefan Claesson, Shep Erhart, Catherine V. Schmitt, Jessica F. Muhlin

Maine Policy Review

A multitude of macroalgae (i.e., seaweed) species that are harvested in Maine are economically and ecologically important. Currently, management of these resources in Maine is focused on rockweed (Ascophyllum nodosum). This seaweed grows in abundance along intertidal rocky shores and provides a number of benefits including serving as habitat and nursery for many species including fin-fish, coastal protection from storms and sea level rise, carbon sequestration, and is a harvestable natural resource used primarily in fertilizer and animal feed production. It is critical that these functions and benefits are maintained and harvesting activities managed to ensure a sustainable …

Comanagement In Maine: Integrating Fishermen’S Ecological Knowledge Into Government Oversight Of Fisheries, Anne Hayden

Maine Policy Review

Comanagement is the sharing of responsibility for management between fishermen and fisheries agencies. It shifts fishermen’s incentives to include longer term conservation goals, generates fine-scale information for management that would not otherwise be available, and develops fishing strategies that are consistent with conservation. Analysis of comanaged fisheries in Maine, for lobster, clams, river herring, and scallops, indicates that comanagement improves fisheries productivity and is more effective than standard, top-down, broad-scale fisheries management.

Reducing Plastic Pollution In The Ocean: Mycobuoys As A Potential Solution, Sue S. Van Hook

Maine Policy Review

Natural mushroom mycelium-based MycoBuoys are an alternative to ubiquitous plastic flotation devices used in Maine aquaculture, fisheries and harbors. They fit perfectly into a circular economic model where natural resources are borrowed for a specific purpose and are returned as elements at the end of product life. MycoBuoys may be composted or used as mulch where 100% of the material enhances soil nutrients upon decomposition. In contrast to this cradle-to-cradle product, currently ubiquitous Stryofoam buoys have expensive end life costs in terms of ecosystem and organismal health consequences. Styrene is a known carcinogen, and the foam particles degrade into smaller …

Community Science In Support Of Ecosystem-Based Management: A Case Study From The Damariscotta River Estuary, Maine, Usa, Sarah C. Risley, Kara E. Pellowe, Melissa L. Britsch, Meredith M. White, Heather M. Leslie

Maine Policy Review

Coastal marine ecosystems are dynamic social-ecological systems (SESs) that support diverse ecosystem services and human activities. The complexity of SESs means that ecosystem-based approaches are increasingly used to support coastal marine ecosystem stewardship. We report how a community science program in Maine, USA offers a model of organizational innovation to expand capacities for shellfish research and management. Since 2019, we have collaborated with local students, shellfish harvesters, and others in data collection, interpretation, and application, contributing to local shellfish management and ecosystem sustainability. We demonstrate how community-based social and ecological research can build adaptive capacities by centering local knowledge; generating …

Why Is The Depletion Of Our Important Fish Stocks So Persistent?, James A. Wilson

Maine Policy Review

In the 1980s and 1990s, two events changed the fundamental structure of Maine's coastal ecology: inshore herring and then nearshore groundfish stocks were overfished and disappeared. Surprisingly, even without fishing, there has been no recovery. Standard fisheries management assumes that the recovery of any locally overfished place should be quick – fish from other places will 'fill in.'

In contrast, recent scientific work on social learning among animals suggests that fish have communication and learning abilities comparable to other vertebrates. Learning allows groups of fish to adapt to much more local places than possible if adaptation depended on genetics alone. …

Strategies To Promote Value And Resilience In The American Lobster (Homarus Americanus) Industry, Nicole Orminski

Electronic Theses and Dissertations

The American lobster (Homarus americanus) fishery is the most valuable single-species fishery in the United States and Canada (DFO, 2021; NOAA Fisheries, n.d.). Coastal communities on both sides of the border rely on the American lobster supply chain, which economically links the two countries with one another and with other countries around the globe. Ongoing disruptions (or shocks) threaten the functionality of the supply chain, and increased globalization leads to greater exposure to shocks as they are transmitted between systems. One research study described in this thesis aims to add value to the industry via post-harvest treatment of …

Understanding The Impacts Of Anthropogenic Effects An Habitat Variability Interactions On Maine's Rocky Intertidal Ecosystem, Laura Braun

Electronic Theses and Dissertations

The rocky intertidal ecosystem is an important ecological and cultural aspect of the picturesque Maine coast, playing a vital role in not only Maine’s coastal ecosystem, but also to Maine’s economy. It’s distinct community structure along the sharp elevational gradient and the presence of daily stressors (wave action, heat, and desiccation), make the rocky intertidal ecosystem an important model ecosystem to monitor for effects from anthropogenic impacts. In this thesis, I describe attempts to monitor and understand the impacts of two of these anthropogenic impacts on this system: climate change and industrial harvesting of Ascophyllum nodosum along Maine’s coast. For …

Using Reflex Actions To Predict Delayed Post-Harvest Mortality Of American Lobster (Homarus Americanus) In Maine’S Lobster Supply Chain, Cassandra Leeman

Electronic Theses and Dissertations

In live seafood industries, maintaining product quality and survivorship are critical aspects of the supply chain infrastructure. Post-harvest mortality in the American lobster (Homarus americanus) fishery can result in a significant loss in revenue for the largest single species fishery in North America. In Maine, the wholesale lobster distribution supply chain directly and indirectly supports state and local economies, providing almost $1 billion in revenue and dominates the fishery, producing 82% of the total lobster landings in the USA (Donihue, 2018; NOAA, 2021). However, at least 2% of the lobster landed in Maine die before they reach consumers, representing an …

Remotely Sensed Assessment Of The Preferred Habitat Of Alexandrium Catenella In The Gulf Of Maine And The Bay Of Fundy, Andre F. Bucci

Electronic Theses and Dissertations

Harmful Algal Blooms (HABs) of the toxic dinoflagellate Alexandrium catenella are an annually recurring problem in the Gulf of Maine (GoM), resulting in risks to human health and substantial economic losses due to shellfish harvesting closures. The monitoring approaches in the region are restricted to real-time identification of the HABs events, when they are clearly underway and already causing deleterious effects to the environment. To fully function as an early warning system rather than an immediate response, monitoring strategies need to be focused on environmental conditions preceding A. catenella HABs. However, the current understanding of the preferred habitat for A. …

Modeling Life History And Population Dynamics Of American Lobster And Atlantic Sea Scallops In A Warming Gulf Of Maine, Cameron T. Hodgdon

Electronic Theses and Dissertations

Climate change is impacting many marine species distributions, life histories, and behaviors, as well as their associated fisheries and overall production. This is perhaps especially true for the Gulf of Maine (GOM). Here, warming rates are exceeding a vast majority of the world’s oceans. This highly dynamic system supports myriad species, but is both economically recognized and culturally known for its Atlantic sea scallop (Placopecten magellanicus) and American lobster (Homarus americanus) fisheries. This dissertation examines the influence of regional climate change on these species in an effort to predict how these stocks and their fisheries may …

Age, Growth, Foraging, And Trophic Ecology Of Bigeye (Thunnus Obesus) And Yellowfin (Thunnus Albacares) Tuna In Continental Shelf And Slope Regions Of The Northeast U.S., Riley S. Austin

Electronic Theses and Dissertations

Traditional stock assessments require, in part, accurate knowledge of growth relationships to estimate a variety of aspects involved in population conservation management of exploited species. In addition, the local distribution and condition of top pelagic predators is driven by detection of abundant forage aggregations and along with traditional stock assessments, should be considered for effective management of marine populations. Empirical analyses of these data are severely lacking for bigeye (Thunnus obesus) and yellowfin (Thunnus albacares) tuna in the Atlantic Ocean, especially for the former. Given historical studies’ observations of these two top predators use as biological samplers due to their …

Identifying Umbrella Species To Inform The Conservation Of Intertidal Areas In Acadia National Park, Abigiail Muscat

Honors College

The nearshore ecosystem in Maine (USA) supports several bird species that rely on intertidal and subtidal zones, including high densities of migratory shorebirds and wintering waterfowl. Additionally, Acadia National Park (ANP) includes some of the country’s highest densities of both Purple Sandpipers (Calidris maritima) and Harlequin Ducks (Histrionicus histrionicus). Here I investigated whether conservation actions taken to preserve these two species of high conservation concern might also benefit the larger taxonomic groups to which they belong, a concept known as “umbrella species conservation”. To answer this question, bird abundance surveys were conducted within ANP during 2021, and detection and occupancy …

The Effect Of Large Wood Restoration On Algal Biomass And Spatial Distribution In The Narraguagus River, Kiera M. Luu

Honors College

The Atlantic Salmon (Salmo salar) is an anadromous fish native to the eastern US and Canada. Though they used to inhabit much of the eastern coasts of New England and Canada, the last of the United States’ wild Atlantic Salmon are now mostly limited to Maine. Due to habitat destruction from dams and historic logging activity, the quality of food sources, spawning grounds, and essential juvenile salmon habitat have been severely impacted. This habitat is the rearing area for many young salmon, and its quality influences their growth and recruitment into the overall Atlantic salmon population. Restoration of Atlantic salmon …

Development Of A High Throughput, Whole Organism Assay For Studying Metabolic Capacity In Crassostrea Virginica, Avuntaura Gulledge

Honors College

Genetic improvement of commercial lines has been a key component in the increased production of eastern oysters (Crassostrea virginica). One form of genetic improvement, induced triploidy, is commonly used to produce sterile oysters with faster growth and higher meat quality. However, the details of the physiological advantage provided by triploidy are poorly understood. Whole animal respiration is an important indicator of an individual’s capacity to meet increased energetic demands for growth and stress response. I have developed an assay for the Agilent’s XFe96 Extracellular Flux Analyzer to measure metabolic capacity (i.e., rates of basal, maximal, mitochondrial, and non-mitochondrial oxygen consumption) …

Comparing Two Non-Invasive Methods For Assessing Marine Mammal Genetic Diversity: Environmental Dna Vs. Fecal Dna, Sydney Jackson

Honors College

As technology and science progresses, the methodology behind observing, monitoring, and sampling marine mammals advances as well. One such technique is environmental DNA or eDNA, which entails extracting organismal DNA from water samples without ever handling or disturbing the organism. It is a cost-efficient and non-invasive method that can be utilized in the sampling of seal haulout sites as is its purpose for this research. Another method, using the DNA analysis of seal fecal samples, is a less invasive method that can also be utilized to monitor and assess marine mammals. Through collecting both fecal and water samples from gray …