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Articles 4531 - 4560 of 253814

Full-Text Articles in Life Sciences

Incidental Ring-Hyperenhancing Liver Micronodules At Ct Hepatic Arteriography-Guided Percutaneous Thermal Ablation Of Colorectal Liver Metastases, Jessica Albuquerque, Yuan-Mao Lin, Iwan Paolucci, Caleb S O'Connor, Ching-Wei Tzeng, Jean-Nicolas Vauthey, Kristy K Brock, Bruno C Odisio Mar 2024

Incidental Ring-Hyperenhancing Liver Micronodules At Ct Hepatic Arteriography-Guided Percutaneous Thermal Ablation Of Colorectal Liver Metastases, Jessica Albuquerque, Yuan-Mao Lin, Iwan Paolucci, Caleb S O'Connor, Ching-Wei Tzeng, Jean-Nicolas Vauthey, Kristy K Brock, Bruno C Odisio

Student and Faculty Publications

CT during hepatic arteriography (CTHA) is a highly sensitive imaging method for detecting colorectal liver metastases (CLMs), which supports its use during percutaneous thermal liver ablation. In contrast to its high sensitivity, its specificity for incidental small CLMs not detected at preablation cross-sectional imaging is believed to be low given the absence of specific imaging signatures and the common presence of pseudolesions. In this retrospective study of 22 patients (mean age, 55 years ± 10.6 [SD]; 63.6% male, 36.4% female) with CLMs undergoing CTHA-guided microwave percutaneous thermal ablation between November 2017 and October 2022, the authors provided a definition of …


An Atlas Of Epithelial Cell States And Plasticity In Lung Adenocarcinoma, Guangchun Han, Ansam Sinjab, Zahraa Rahal, Anne M Lynch, Warapen Treekitkarnmongkol, Yuejiang Liu, Alejandra G Serrano, Jiping Feng, Ke Liang, Khaja Khan, Wei Lu, Sharia D Hernandez, Yunhe Liu, Xuanye Cao, Enyu Dai, Guangsheng Pei, Jian Hu, Camille Abaya, Lorena I Gomez-Bolanos, Fuduan Peng, Minyue Chen, Edwin R Parra, Tina Cascone, Boris Sepesi, Seyed Javad Moghaddam, Paul Scheet, Marcelo V Negrao, John V Heymach, Mingyao Li, Steven M Dubinett, Christopher S Stevenson, Avrum E Spira, Junya Fujimoto, Luisa M Solis, Ignacio I Wistuba, Jichao Chen, Linghua Wang, Humam Kadara Mar 2024

An Atlas Of Epithelial Cell States And Plasticity In Lung Adenocarcinoma, Guangchun Han, Ansam Sinjab, Zahraa Rahal, Anne M Lynch, Warapen Treekitkarnmongkol, Yuejiang Liu, Alejandra G Serrano, Jiping Feng, Ke Liang, Khaja Khan, Wei Lu, Sharia D Hernandez, Yunhe Liu, Xuanye Cao, Enyu Dai, Guangsheng Pei, Jian Hu, Camille Abaya, Lorena I Gomez-Bolanos, Fuduan Peng, Minyue Chen, Edwin R Parra, Tina Cascone, Boris Sepesi, Seyed Javad Moghaddam, Paul Scheet, Marcelo V Negrao, John V Heymach, Mingyao Li, Steven M Dubinett, Christopher S Stevenson, Avrum E Spira, Junya Fujimoto, Luisa M Solis, Ignacio I Wistuba, Jichao Chen, Linghua Wang, Humam Kadara

Student and Faculty Publications

Understanding the cellular processes that underlie early lung adenocarcinoma (LUAD) development is needed to devise intervention strategies1. Here we studied 246,102 single epithelial cells from 16 early-stage LUADs and 47 matched normal lung samples. Epithelial cells comprised diverse normal and cancer cell states, and diversity among cancer cells was strongly linked to LUAD-specific oncogenic drivers. KRAS mutant cancer cells showed distinct transcriptional features, reduced differentiation and low levels of aneuploidy. Non-malignant areas surrounding human LUAD samples were enriched with alveolar intermediate cells that displayed elevated KRT8 expression (termed KRT8+ alveolar intermediate cells (KACs) here), reduced differentiation, increased plasticity and driver …


Amyopathic Dermatomyositis May Be On The Spectrum Of Autoinflammatory Disease: A Clinical Review, Saika Sharmeen, Lisa Christopher-Stine, Joann N Salvemini, Peter Gorevic, Richard Clark, Qingping Yao Mar 2024

Amyopathic Dermatomyositis May Be On The Spectrum Of Autoinflammatory Disease: A Clinical Review, Saika Sharmeen, Lisa Christopher-Stine, Joann N Salvemini, Peter Gorevic, Richard Clark, Qingping Yao

Student and Faculty Publications

Systemic autoinflammatory diseases (SAIDs) are distinct from autoimmune diseases. The former primarily results from abnormal innate immune response and genetic testing is crucial for disease diagnosis. Similar cutaneous involvement is a main feature for both SAID and dermatomyositis (DM), so they can be confused with each other. A literature search of PubMed and MEDLINE was conducted for relevant articles. The similarities and differences between these two types of diseases were analyzed. We found phenotypic similarities between these two types of disorders. Accumulating data supports a major role of the innate immune system and a similar cytokine profile. Molecular testing using …


Safety, Efficacy And Determinants Of Response Of Allogeneic Cd19-Specific Car-Nk Cells In Cd19+ B Cell Tumors: A Phase 1/2 Trial, David Marin, Ye Li, Rafet Basar, Hind Rafei, May Daher, Jinzhuang Dou, Vakul Mohanty, Merve Dede, Yago Nieto, Nadima Uprety, Sunil Acharya, Enli Liu, Jeffrey Wilson, Pinaki Banerjee, Homer A Macapinlac, Christina Ganesh, Peter F Thall, Roland Bassett, Mariam Ammari, Sheetal Rao, Kai Cao, Mayra Shanley, Mecit Kaplan, Chitra Hosing, Partow Kebriaei, Loretta J Nastoupil, Christopher R Flowers, Sadie Mae Moseley, Paul Lin, Sonny Ang, Uday R Popat, Muzaffar H Qazilbash, Richard E Champlin, Ken Chen, Elizabeth J Shpall, Katayoun Rezvani Mar 2024

Safety, Efficacy And Determinants Of Response Of Allogeneic Cd19-Specific Car-Nk Cells In Cd19+ B Cell Tumors: A Phase 1/2 Trial, David Marin, Ye Li, Rafet Basar, Hind Rafei, May Daher, Jinzhuang Dou, Vakul Mohanty, Merve Dede, Yago Nieto, Nadima Uprety, Sunil Acharya, Enli Liu, Jeffrey Wilson, Pinaki Banerjee, Homer A Macapinlac, Christina Ganesh, Peter F Thall, Roland Bassett, Mariam Ammari, Sheetal Rao, Kai Cao, Mayra Shanley, Mecit Kaplan, Chitra Hosing, Partow Kebriaei, Loretta J Nastoupil, Christopher R Flowers, Sadie Mae Moseley, Paul Lin, Sonny Ang, Uday R Popat, Muzaffar H Qazilbash, Richard E Champlin, Ken Chen, Elizabeth J Shpall, Katayoun Rezvani

Student and Faculty Publications

There is a pressing need for allogeneic chimeric antigen receptor (CAR)-immune cell therapies that are safe, effective and affordable. We conducted a phase 1/2 trial of cord blood-derived natural killer (NK) cells expressing anti-CD19 chimeric antigen receptor and interleukin-15 (CAR19/IL-15) in 37 patients with CD19+ B cell malignancies. The primary objectives were safety and efficacy, defined as day 30 overall response (OR). Secondary objectives included day 100 response, progression-free survival, overall survival and CAR19/IL-15 NK cell persistence. No notable toxicities such as cytokine release syndrome, neurotoxicity or graft-versus-host disease were observed. The day 30 and day 100 OR rates were …


Omics-Based Profiles And Biomarkers Of Respiratory Infections: Are We There Yet?, Jezreel Pantaleon Garcia, Scott E Evans Mar 2024

Omics-Based Profiles And Biomarkers Of Respiratory Infections: Are We There Yet?, Jezreel Pantaleon Garcia, Scott E Evans

Student and Faculty Publications

Descriptive omics-based clinical research provides valuable early steps in understanding host immune responses to respiratory pathogens in our global efforts to mitigate the impacts of severe respiratory infections with rapidly evolving technologies https://bit.ly/4bjJsvL


It’S Dead! Can Postbiotics Really Help Performance And Recovery? A Systematic Review, Chad M. Kerksick, Jessica M. Moon, Ralf Jäger Mar 2024

It’S Dead! Can Postbiotics Really Help Performance And Recovery? A Systematic Review, Chad M. Kerksick, Jessica M. Moon, Ralf Jäger

Faculty Scholarship

In recent years, postbiotics have increased in popularity, but the potential relevancy of postbiotics for augmenting exercise performance, recovery, and health is underexplored. A systematic literature search of Google Scholar and PubMed databases was performed with the main objective being to identify and summarize the current body of scientific literature on postbiotic supplementation and outcomes related to exercise performance and recovery. Inclusion criteria for this systematic review consisted of peer-reviewed, randomized, double-blind, and placebo-controlled trials, with a population including healthy men or women >18 years of age. Studies required the incorporation of a postbiotic supplementation regimen and an outcome linked …


Milk Or Kefir, In Comparison To Water, Do Not Enhance Running Time-Trial Performance In Endurance Master Athletes, Kristen N. Gross, Patrick S. Harty, Joesi M. Krieger, Petey W. Mumford, Kyle L. Sunderland, Anthony M. Hagele, Chad Kerksick Mar 2024

Milk Or Kefir, In Comparison To Water, Do Not Enhance Running Time-Trial Performance In Endurance Master Athletes, Kristen N. Gross, Patrick S. Harty, Joesi M. Krieger, Petey W. Mumford, Kyle L. Sunderland, Anthony M. Hagele, Chad Kerksick

Faculty Scholarship

This study compared flavored kefir (KFR) and flavored milk (MLK) as a recovery drink in endurance master athletes. Using a randomized, placebo-controlled, non-blinded crossover design, 11 males and females completed three testing visits whilst acutely ingesting either KFR, MLK, or water as a placebo (PLA). KFR supplementation occurred for 14 days before the KFR-testing day, followed by a 3-week washout period. Testing visits consisted of an exhausting-exercise (EE) bout, a 4-h rest period where additional carbohydrate feeding was provided, and a treadmill 5 km time trial (TT). The Gastrointestinal Symptom Rating Scale (GSRS) survey was assessed at four timepoints. Blood …


Ecological Risk Assessment For The Western Australian Cephalopod Resource, Cameron J. Desfosses, Kimberley A. Smith, Lachlan W.S. Strain, Dave Murphy, Keyley Hogan-West, Daniel Yeoh, Shannon Burchert, Linda Wiberg, Bec Oliver, Brett M. Crisafulli, Gabby E. Mitsopoulos Mar 2024

Ecological Risk Assessment For The Western Australian Cephalopod Resource, Cameron J. Desfosses, Kimberley A. Smith, Lachlan W.S. Strain, Dave Murphy, Keyley Hogan-West, Daniel Yeoh, Shannon Burchert, Linda Wiberg, Bec Oliver, Brett M. Crisafulli, Gabby E. Mitsopoulos

Fisheries research reports

On 27 October 2023, the Department of Primary Industries and Regional Development (DPIRD, Department) convened an ecological risk assessment (ERA) of the fisheries that access the statewide Cephalopod Resource (Resource), which comprises a range of octopus, squid and cuttlefish species. This document contains the background information used to support the ERA risk scoring process, and a summary of the workshop discussions that were relevant to the risk scoring. The background information includes an overview of Western Australian commercial fisheries that access the Resource, focusing primarily on the Octopus Interim Managed Fishery (OIMF), Cockburn Sound Line and Pot Managed Fishery (CSLPMF), …


Ecological Risk Assessment For The Western Australian Large Pelagic Fish Resource, Kimberley A. Smith, Paul Lewis, Kendra Travaille, Brett M. Crisafulli, Liv Rynvis, Gabby E. Mitsopoulos Mar 2024

Ecological Risk Assessment For The Western Australian Large Pelagic Fish Resource, Kimberley A. Smith, Paul Lewis, Kendra Travaille, Brett M. Crisafulli, Liv Rynvis, Gabby E. Mitsopoulos

Fisheries research reports

In December 2023, the Department of Primary Industries and Regional Development (DPIRD, the Department) convened an ecological risk assessment (ERA) of the fisheries that access the Statewide Large Pelagic Fish Resource (Resource). This Resource comprises a range of tropical and temperate species including mackerels, billfish, kingfish, cobia, mahi mahi and tunas. This document contains the background information used to support the ERA risk scoring process, scoring from the workshop and a summary of the workshop discussions that were relevant to the risk scoring. This includes an overview of Western Australian commercial fisheries that access the Resource, with a focus on …


Procedures For Rangeland Condition Assessment In The Kimberley 2022, Department Of Primary Industries And Regional Development Mar 2024

Procedures For Rangeland Condition Assessment In The Kimberley 2022, Department Of Primary Industries And Regional Development

Natural resources published reports

This report defines the procedures used in 2022 by the Department of Primary Industries and Regional Development (DPIRD) to complete rangeland condition assessment (RCA) in the Kimberley region which has grass-based pastures. For the rest of the pastoral estate, DPIRD uses the Procedures for RCA in the Pilbara and southern rangelands which have predominantly shrub pastures.

RCA is the process DPIRD uses to make systematic, lease-level assessment of rangeland. Rangeland condition considers both the condition of pastures (as defined in the Pasture condition guide for the Kimberley, Ryan et al. 2013) and soils as determined by erosion, using the …


Spectrophotometric Analysis Of Purple Urine Secondary To Methylene Blue And Hydroxocobalamin Co-Administration, Jeremy Hardin, Henrik Galust, Richard Franklin Clark, Binh Ly, Raymond Theodore Suhandynata Mar 2024

Spectrophotometric Analysis Of Purple Urine Secondary To Methylene Blue And Hydroxocobalamin Co-Administration, Jeremy Hardin, Henrik Galust, Richard Franklin Clark, Binh Ly, Raymond Theodore Suhandynata

Student and Faculty Publications

BACKGROUND: The development of purple urine after methylene blue (methylthioninium chloride) and hydroxocobalamin co-administration is a rare clinical entity that has not been fully elucidated. A 47-year-old male presented to the emergency department with hypotension, cyanosis, and depressed mental status. The patient was noted to have profound peripheral and central cyanosis, as well as chocolate-colored arterial blood. He was treated with both methylene blue and hydroxocobalamin and developed purple urine for approximately 1 week.

METHODS: Color chromatography was performed by placing the patient's urine directly onto absorbent filter paper. Urine spectrophotometry was performed utilizing the NanoDrop One/One C UV-Vis Spectrophotometer. …


Image-Based Multiplex Immune Profiling Of Cancer Tissues: Translational Implications. A Report Of The International Immuno-Oncology Biomarker Working Group On Breast Cancer., Chowdhury Arif Jahangir, David B. Page, Glenn Broeckx, Claudia A. Gonzalez, Caoimbhe Burke, Clodagh Murphy, Jorge S. Reis-Filho, Amy Ly, Paul Harms, Shahin Sayed Mar 2024

Image-Based Multiplex Immune Profiling Of Cancer Tissues: Translational Implications. A Report Of The International Immuno-Oncology Biomarker Working Group On Breast Cancer., Chowdhury Arif Jahangir, David B. Page, Glenn Broeckx, Claudia A. Gonzalez, Caoimbhe Burke, Clodagh Murphy, Jorge S. Reis-Filho, Amy Ly, Paul Harms, Shahin Sayed

Pathology, East Africa

Recent advances in the field of immuno-oncology have brought transformative changes in the management of cancer patients. The immune profile of tumours has been found to have key value in predicting disease prognosis and treatment response in various cancers. Multiplex immunohistochemistry and immunofluorescence have emerged as potent tools for the simultaneous detection of multiple protein biomarkers in a single tissue section, thereby expanding opportunities for molecular and immune profiling while preserving tissue samples. By establishing the phenotype of individual tumour cells when distributed within a mixed cell population, the identification of clinically relevant biomarkers with high-throughput multiplex immunophenotyping of tumour …


Comstock Point, Lubec, Maine - A Natural And Photographic History, Willaim H. Schlesinger, Lisa M. Dellwo Mar 2024

Comstock Point, Lubec, Maine - A Natural And Photographic History, Willaim H. Schlesinger, Lisa M. Dellwo

Documents from Environmental Organizations

A natural and photographic history of our lands compiled by Lisa Dellwo and Bill Schlesinger, with the help of many friends and neighbors.


Do Nitrogen And Phosphorus Influence Channel Catfish Growth In A Great Plains River?, Camden E. Oathout, Mark A. Pegg Mar 2024

Do Nitrogen And Phosphorus Influence Channel Catfish Growth In A Great Plains River?, Camden E. Oathout, Mark A. Pegg

International Journal of Undergraduate Research and Creative Activities

Evaluating abiotic environmental factors that influence growth of sportfish is key to understanding population dynamics and making appropriate management decisions. This is especially true in river systems where primary and secondary productivity can vary across temporal and spatial scales. In this study, we assessed fish responses to ambient nutrient levels (total nitrogen and total phosphorus) using growth rates determined from age-1 Channel Catfish, Ictalurus punctatus, in Platte River, Nebraska. Water quality and growth data were collected from sites across the central and lower Platte River from 2007 to 2013. We analyzed Platte River water quality data to find yearly average …


Herptile Gut Microbiomes: A Natural System To Study Multi-Kingdom Interactions Between Filamentous Fungi And Bacteria, Lluvia Vargas-Gastélum, Alexander S. Romer, Marjan Ghotbi, Jason W. Dallas, Reed. N. Alexander, Kylie C. Moe, Kerry L. Mcphail, George F. Neuhaus, Leila Shadmani, Joseph W. Spatafora, Jason E. Stajich, Javier F. Tabima, Donald M. Walker Mar 2024

Herptile Gut Microbiomes: A Natural System To Study Multi-Kingdom Interactions Between Filamentous Fungi And Bacteria, Lluvia Vargas-Gastélum, Alexander S. Romer, Marjan Ghotbi, Jason W. Dallas, Reed. N. Alexander, Kylie C. Moe, Kerry L. Mcphail, George F. Neuhaus, Leila Shadmani, Joseph W. Spatafora, Jason E. Stajich, Javier F. Tabima, Donald M. Walker

Biology

Reptiles and amphibians (herptiles) are some of the most endangered and threatened species on the planet and numerous conservation strategies are being implemented with the goal of ensuring species recovery. Little is known, however, about the gut microbiome of wild herptiles and how it relates to the health of these populations. Here, we report results from the gut microbiome characterization of both a broad survey of herptiles, and the correlation between the fungus Basidiobolus, and the bacterial community supported by a deeper, more intensive sampling of Plethodon glutinosus, known as slimy salamanders. We demonstrate that bacterial communities sampled from frogs, …


Effects Of Storage Conditions On Chemistry And Technological Properties Of Different Cultivars Of Chickpea, Shirin Kazemzadeh Pournaki, Atanu Biswas, Clifford Hall Mar 2024

Effects Of Storage Conditions On Chemistry And Technological Properties Of Different Cultivars Of Chickpea, Shirin Kazemzadeh Pournaki, Atanu Biswas, Clifford Hall

Dairy Science and Food Science Faculty Publications: 2022 to Present

The impact of storage conditions, such as 40 °C, high humidities (55% and 65%), and storage (360 days), on the nutritional value, pasting, and functional properties, color differences, and quality of protein and starch in five Chickpea (Cicer arietinum) cultivars (Crown, Royal, Sierra, Orion, and Frontier) was determined. The Sierra cultivar had the highest initial moisture content (MC, 7.7 ± 0.01%), and MC increased over time for all samples stored at 55% and 65% RH and 21 °C. Protein (PC), total starch (TSC), and fat (FC) contents changed in all cultivars during storage. Under the same storage conditions …


Overview Of Commercial Horticulture Farms In Vermont, Vernon P. Grubinger Mar 2024

Overview Of Commercial Horticulture Farms In Vermont, Vernon P. Grubinger

UVM Extension Faculty Publications

This 8-page report summarizes U.S. Census of Agriculture data over 20 years that describes horticultural farms in Vermont. These data are for farms producing apples, berries, Christmas trees, floriculture crops, grapes, and/or vegetables. Trends in farm number, annual sales, and production acreage are presented and discussed. Additional data sources are used to describe organic production, membership in grower associations, and high tunnel production.


Foraminifera As A Model Of Eukaryotic Genome Dynamism, Caitlin Timmons, Kristine Le, H. B. Rappaport, Elinor G. Sterner, Xyrus X. Maurer-Alcaláh, Susan T. Goldstein, Laura A. Katz Mar 2024

Foraminifera As A Model Of Eukaryotic Genome Dynamism, Caitlin Timmons, Kristine Le, H. B. Rappaport, Elinor G. Sterner, Xyrus X. Maurer-Alcaláh, Susan T. Goldstein, Laura A. Katz

Biological Sciences: Faculty Publications

In contrast to the canonical view that genomes cycle only between haploid and diploid states, many eukaryotes have dynamic genomes that change content throughout an individual’s life cycle. However, the few detailed studies of microeukaryotic life cycles render our understanding of eukaryotic genome dynamism incomplete. Foraminifera (Rhizaria) are an ecologically important, yet understudied, clade of microbial eukaryotes with complex life cycles that include changes in ploidy and genome organization. Here, we apply fluorescence microscopy and image analysis techniques to over 2,800 nuclei in 110 cells to characterize the life cycle of Allogromia laticollaris strain Cold Spring Harbor (CSH), one of …


Metropolitan Monitoring Program 2023, Alissa C. Tate, Lucy J. Rudd, Claire B. Smallwood, Karina L. Ryan Mar 2024

Metropolitan Monitoring Program 2023, Alissa C. Tate, Lucy J. Rudd, Claire B. Smallwood, Karina L. Ryan

Fisheries research reports

Annual surveys of shore- and boat-based recreational fishers within the Metropolitan zone of the West Coast bioregion provide information on human dimensions and catch-per-fisher as well as mean length and weight of key recreationally caught species. For shore-based fishers, estimates of effort, catch and harvest are also presented for key nearshore species. This information is used to support ongoing assessments for key demersal and nearshore species and review the effectiveness of fisheries managements, such as Australian Herring and Southern Garfish.

A roving creel survey of shore-based fishers was used to collect data between Ocean Reef and Point Peron (30% of …


Nebline, Mar./Apr. 2024 Mar 2024

Nebline, Mar./Apr. 2024

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Seven Garden Gaffes to Avoid This Year by Sarah Browning

Youth Advance Health Equity with Community-Based Research by Emily Gratopp

Recipe of the Month: Crunchy Kohlrabi Salad by Emily Gratopp

GROBigRed Virtual Learning Series

Garden Guide: Things to Do This Month

2024 Lincoln Early Childhood Conference

2024 Chemigation Training

Corn Yield Challenge for 4-H and FFA Members

Lancaster County Ag VIP Awards

4-H Teens Work Together to Lead the Lock-In

4-H Horse/Livestock Judging Teams at Nationals

Heart of 4-H Volunteer Award: Sheridan Swotek and Kim Bowen

4-H Club Gives Youth With Disabilities Opportunity to Show Lambs

4-H Rabbit Show, March …


Evaluation Of Ndot’S Sediment Barrier Practices Using Performance Data, Michael A. Perez, Wesley N. Donald, J. Blake Whitman, Brian G. Roche Mar 2024

Evaluation Of Ndot’S Sediment Barrier Practices Using Performance Data, Michael A. Perez, Wesley N. Donald, J. Blake Whitman, Brian G. Roche

Nebraska Department of Transportation: Research Reports

To protect waterways adjacent to construction projects with disturbed land, a 50 ft (15 m) vegetated buffer or equivalent sediment controls are required. However, there is little guidance on the effectiveness of vegetated buffers in removing sediment or how sediment barriers can aid shorter buffers or replace buffers. A modeling methodology was developed and used to determine the performance of 11,664 50 ft (15 m) vegetated buffer configurations with Nebraska conditions; sediment capture averaged 92.6% and ranged from 18.5% to 99.5%. To determine the performance of Nebraska Department of Transportation standard and modified sediment barrier installations, a large-scale testing methodology …


Assessing Biological Condition Of Restored Streams In An Agriculturally Impaired Chesapeake Bay Sub-Watershed, Julia M. Portmann, Bruce Wiggins Mar 2024

Assessing Biological Condition Of Restored Streams In An Agriculturally Impaired Chesapeake Bay Sub-Watershed, Julia M. Portmann, Bruce Wiggins

Department of Biology - Faculty Scholarship

Intensive agricultural practices can be detrimental to aquatic biological conditions; however, restoration such as removing livestock and creating in-stream habitat can strengthen biotic communities. Smith Creek, a sub-watershed of the Chesa- peake Bay, was designated a showcase watershed in 2010 by the United States Department of Agriculture to demonstrate the efficacy of widespread restoration. Our study sought to follow up on these efforts by assessing the individual and combined impacts of restoration, habitat, and land cover on aquatic macroinvertebrate communities in Smith Creek. We predicted that longer-restored sites, sites with less surrounding pasture, and streams with larger substrate size would …


Different Levels Of Single-Strain Probiotic (Bacillus Subtilis) With Proteolytic Enzyme (Serratiopeptidase) Can Be Used As An Alternative To Antibiotic Growth Promoters In Broiler, Muhammad Mushtaq, Baseerat Ali, Majid Ali, Neelam Bibi, Rabin Raut, Gamaleldin M. Suliman, Ayman A. Swelum Mar 2024

Different Levels Of Single-Strain Probiotic (Bacillus Subtilis) With Proteolytic Enzyme (Serratiopeptidase) Can Be Used As An Alternative To Antibiotic Growth Promoters In Broiler, Muhammad Mushtaq, Baseerat Ali, Majid Ali, Neelam Bibi, Rabin Raut, Gamaleldin M. Suliman, Ayman A. Swelum

Agricultural and Environmental Sciences Faculty Research

In the current study, the proteolytic enzyme (serratiopeptidase) was used to enhance the efficacy of Bacillus subtilis (B. subtilis) probiotic as a growth promotor in broiler chicken. The effects of serratiopeptidase on the efficacy of different levels of B. subtilis as a growth promotor in broiler chicks were evaluated regarding growth performance traits, villus histomorphometric characterization, and intestinal microbiota count. Day-old broiler chicks (n = 120) were allocated into 4 groups having 3 replicates/group. In the control group (C), the basal diet was kept without supplementation. In treatment groups (P100, P150, and P200), the basal diet was supplemented with 100, …


Advances In Methods For Trna Sequencing And Quantification, Nigam H. Padhiar, Upendra Katneni, Anton A. Komar, Yuri Motorin, Chava Kimchi-Sarfaty Mar 2024

Advances In Methods For Trna Sequencing And Quantification, Nigam H. Padhiar, Upendra Katneni, Anton A. Komar, Yuri Motorin, Chava Kimchi-Sarfaty

Biological, Geological, and Environmental Faculty Publications

In the past decade tRNA sequencing (tRNA-seq) has attracted considerable attention as an important tool for the development of novel approaches to quantify highly modified tRNA species and to propel tRNA research aimed at understanding the cellular physiology and disease and development of tRNA-based therapeutics. Many methods are available to quantify tRNA abundance while accounting for modifications and tRNA charging/acylation. Advances in both library preparation methods and bioinformatic workflows have enabled developments in next-generation sequencing (NGS) workflows. Other approaches forgo NGS applications in favor of hybridization-based approaches. In this review we provide a brief comparative overview of various tRNA quantification …


Design And Test The Effectiveness Of Interpretive Signs Using Eye Tracking And Biometric Data, Hadara Gordon, Wendy Miyazaki Mar 2024

Design And Test The Effectiveness Of Interpretive Signs Using Eye Tracking And Biometric Data, Hadara Gordon, Wendy Miyazaki

Baker/Koob Endowments Awarded Projects

Recreational trails on forested lands should satisfy the needs of recreationists, safeguard important habitats, and maintain the natural environment (Kortenkamp et al., 2021). Appropriate management is critical because of the increasing number of visitors. Signs are a cost-effective method to reduce the negative impacts on visitors and enhance visitor experiences (Brown et al., 2010). This research aimed to investigate how visitors pay attention to signs, view the trail surrounded by trees and behave in a natural space.


Investigating The Mechanisms Of Surface Sensing Using Motility Appendages By Pseudomonas Aeruginosa Pa14, Christopher James Geiger Mar 2024

Investigating The Mechanisms Of Surface Sensing Using Motility Appendages By Pseudomonas Aeruginosa Pa14, Christopher James Geiger

Dartmouth College Ph.D Dissertations

Biofilms are surfaced attached communities of cells encased in an extracellular matrix. The transition from free-swimming planktonic cells to a surface attached biofilm begins with cellular changes that occur after surface contact. This process is known as "surface sensing" and the opportunistic pathogen Pseudomonas aeruginosa PA14 uses its two motility appendages, type IV pili (T4P) and a single, polar flagellum to sense and traverse surfaces. The first cellular changes to occur within this organism upon surface contact is an increase in the second messengers cAMP and cdi- GMP. While the genes involved in surface sensing by P. aeruginosa are known, …


Two New Species Of Bumblebee Scarabs (Coleoptera: Glaphyridae: Lichnanthe Burmeister) From The Central United States: A New Discovery In Wyoming Resolves A Century-Old Puzzle From The Nebraska Sand Hills, Matthew J. Paulsen Mar 2024

Two New Species Of Bumblebee Scarabs (Coleoptera: Glaphyridae: Lichnanthe Burmeister) From The Central United States: A New Discovery In Wyoming Resolves A Century-Old Puzzle From The Nebraska Sand Hills, Matthew J. Paulsen

Insecta Mundi

The genus Lichnanthe Burmeister (Coleoptera: Scarabaeoidea: Glaphyridae) has comprised eight Nearctic species and contains the only New World members of their family. Here, two new species of arenicolous bumblebee scarabs are described from the central United States. The recent discovery of an undescribed Wyoming species led to the reevaluation of a dubious 134-year-old Nebraska Lichnanthe specimen, indicating that it also was an undescribed species. These two species, Lichnanthe brusti new species from central Wyoming and L. bruneri new species from central Nebraska are immediately distinguishable from all existing species of the genus by their square mandibles.

ZooBank registration. urn:lsid:zoobank.org:pub:401927DA-66D9-47A1-AE68-965210824713


Anthrenus (Anthrenus) Muehlei, A New Species (Coleoptera: Dermestidae: Megatominae) From Iran, Graham J. Holloway, Andreas Herrmann Mar 2024

Anthrenus (Anthrenus) Muehlei, A New Species (Coleoptera: Dermestidae: Megatominae) From Iran, Graham J. Holloway, Andreas Herrmann

Insecta Mundi

A new species, Anthrenus muehlei Holloway and Herrmann (Coleoptera: Dermestidae: Megatominae), from Iran is described. Images of internal and external features are presented. Only female specimens were found and described, but the bursa copulatrix contains obvious sclerites enabling easy differentiation from all other known species from the Palaearctic A. pimpinellae complex. The possible function and taxonomic implication of the sclerites is mentioned.

ZooBank registration. urn:lsid:zoobank.org:pub:97661C20-803E-4785-A4B0-58B16C94D9A2


Field Research Report: Results From The Enreec Vri Field For The 2021, 2022, And 2023 Crop Seasons, Derek M. Heeren, Ali T. Mohammed, Eric Wilkening, Christopher M. U. Neale, Alan L. Boldt, Ankit Chandra, Precious Nneka Amori, Ivo Z. Goncalves, Yeyin Shi, Guillermo R. Balboa Mar 2024

Field Research Report: Results From The Enreec Vri Field For The 2021, 2022, And 2023 Crop Seasons, Derek M. Heeren, Ali T. Mohammed, Eric Wilkening, Christopher M. U. Neale, Alan L. Boldt, Ankit Chandra, Precious Nneka Amori, Ivo Z. Goncalves, Yeyin Shi, Guillermo R. Balboa

Department of Biological Systems Engineering: Conference Presentations and White Papers

Long-term irrigation management research has been conducted from 2014 to 2023 for corn and soybean at the Eastern Nebraska Research, Extension, and Education Center (ENREEC) Variable Rate Irrigation (VRI) Field located in subhumid east-central Nebraska (in the Lower Platte North Natural Resources District). The objective of this report was to present the overall results from the VRI Field for 2021 to 2023. Across the three growing seasons, there were the following irrigation treatments: Best Management Practice (BMP), 50% BMP, 125% BMP, rainfed, Spatial ET Modeling Interface (SETMI), SDD1, SDD2, machine-learning-based Cyber-Physical System (CPS), a student team recommended rate, and industry …


Impact Of Sodium Benzoate And A High Fat Diet On Kidney Of Mice., Anna Lipinski Mar 2024

Impact Of Sodium Benzoate And A High Fat Diet On Kidney Of Mice., Anna Lipinski

College of Arts & Sciences Senior Honors Theses

Sodium Benzoate (SB) is a commonly utilized food preservative with potential therapeutic uses for neurological conditions such as Alzheimer’s disease and hepatic encephalopathy. Consumption of SB is generally regarded as safe (GRAS), by the Food and Drug Administration, at amounts of 0.1% by weight of food. However, previous reports indicate that SB exposure may induce histological alterations in kidney structures and promote oxidative stress. Thus, with increasing obesity rates and fatty diets, the effects of SB coupled to a high fat diet (HFD) remain to be determined. This study addressed the hypothesis that SB with a HFD will increase extracellular …