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Longitudinal Data Analysis and Time Series Commons™
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- Genetics (4)
- Amplifications (1)
- As-treated analysis; Per-protocol analysis; Causal inference; Instrumental variables; Principal stratification; Propensity scores (1)
- Asymptotic bias and variance; Clustered survival data; Efficiency; Estimating equation; Kernel smoothing; Marginal model; Sandwich estimator (1)
- Asymptotic bias; EM algorithm; Maximum likelihood estimator; Measurement error; Structural modeling; Transitional Models (1)
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- Asymptotic efficiency; Conditional score method; Functional modeling; Measurement error; Longitudinal data; Semiparametric inference; Transition models (1)
- Binary time series; Complementary log-log link; Generalised linear mixed model; Multivariate gamma (1)
- Cancer (1)
- Causal inference; longitudinal data; observational data; dynamic treatment regime; Human Immunodeficiency Virus; antiretroviral (1)
- Clinical trials; Doubly randomized preference trials; EM algorithm; Partically randomized preference trials; Randomization; Selection bias (1)
- Clustered binary data; conditional maximum likelihood; marginal maximum likelihood; specification test (1)
- Copy number (1)
- DNA (1)
- Deletions (1)
- Empirical/statistical models; analytical methods; epidemiology; particulate matter; criteria pollutants (1)
- Genomic alterations (1)
- Intensity ratios (1)
- MCMC (1)
- MCMC; air pollution; spatio-temporal models; predictions; penalised splines (1)
- Tumor (1)
Articles 1 - 13 of 13
Full-Text Articles in Longitudinal Data Analysis and Time Series
Statistical Analysis Of Air Pollution Panel Studies: An Illustration, Holly Janes, Lianne Sheppard, Kristen Shepherd
Statistical Analysis Of Air Pollution Panel Studies: An Illustration, Holly Janes, Lianne Sheppard, Kristen Shepherd
UW Biostatistics Working Paper Series
The panel study design is commonly used to evaluate the short-term health effects of air pollution. Standard statistical methods for analyzing longitudinal data are available, but the literature reveals that the techniques are not well understood by practitioners. We illustrate these methods using data from the 1999 to 2002 Seattle panel study. Marginal, conditional, and transitional approaches for modeling longitudinal data are reviewed and contrasted with respect to their parameter interpretation and methods for accounting for correlation and dealing with missing data. We also discuss and illustrate techniques for controlling for time-dependent and time-independent confounding, and for exploring and summarizing …
Bayesian Hidden Markov Modeling Of Array Cgh Data, Subharup Guha, Yi Li, Donna Neuberg
Bayesian Hidden Markov Modeling Of Array Cgh Data, Subharup Guha, Yi Li, Donna Neuberg
Harvard University Biostatistics Working Paper Series
Genomic alterations have been linked to the development and progression of cancer. The technique of Comparative Genomic Hybridization (CGH) yields data consisting of fluorescence intensity ratios of test and reference DNA samples. The intensity ratios provide information about the number of copies in DNA. Practical issues such as the contamination of tumor cells in tissue specimens and normalization errors necessitate the use of statistics for learning about the genomic alterations from array-CGH data. As increasing amounts of array CGH data become available, there is a growing need for automated algorithms for characterizing genomic profiles. Specifically, there is a need for …
Structural Inference In Transition Measurement Error Models For Longitudinal Data, Wenqin Pan, Xihong Lin, Donglin Zeng
Structural Inference In Transition Measurement Error Models For Longitudinal Data, Wenqin Pan, Xihong Lin, Donglin Zeng
Harvard University Biostatistics Working Paper Series
No abstract provided.
Estimation In Semiparametric Transition Measurement Error Models For Longitudinal Data, Wenqin Pan, Donglin Zeng, Xihong Lin
Estimation In Semiparametric Transition Measurement Error Models For Longitudinal Data, Wenqin Pan, Donglin Zeng, Xihong Lin
Harvard University Biostatistics Working Paper Series
No abstract provided.
Nonparametric Regression Using Local Kernel Estimating Equations For Correlated Failure Time Data, Zhangsheng Yu, Xihong Lin
Nonparametric Regression Using Local Kernel Estimating Equations For Correlated Failure Time Data, Zhangsheng Yu, Xihong Lin
Harvard University Biostatistics Working Paper Series
No abstract provided.
Causal Inference In Hybrid Intervention Trials Involving Treatment Choice, Qi Long, Rod Little, Xihong Lin
Causal Inference In Hybrid Intervention Trials Involving Treatment Choice, Qi Long, Rod Little, Xihong Lin
Harvard University Biostatistics Working Paper Series
No abstract provided.
A Comparison Of Methods For Estimating The Causal Effect Of A Treatment In Randomized Clinical Trials Subject To Noncompliance, Rod Little, Qi Long, Xihong Lin
A Comparison Of Methods For Estimating The Causal Effect Of A Treatment In Randomized Clinical Trials Subject To Noncompliance, Rod Little, Qi Long, Xihong Lin
Harvard University Biostatistics Working Paper Series
No abstract provided.
A Computationally Tractable Multivariate Random Effects Model For Clustered Binary Data, Brent A. Coull, E. Andres Houseman, Rebecca A. Betensky
A Computationally Tractable Multivariate Random Effects Model For Clustered Binary Data, Brent A. Coull, E. Andres Houseman, Rebecca A. Betensky
Harvard University Biostatistics Working Paper Series
No abstract provided.
Individualized Treatment Rules: Generating Candidate Clinical Trials, Maya L. Petersen, Steven G. Deeks, Mark J. Van Der Laan
Individualized Treatment Rules: Generating Candidate Clinical Trials, Maya L. Petersen, Steven G. Deeks, Mark J. Van Der Laan
U.C. Berkeley Division of Biostatistics Working Paper Series
Statistical methods have rarely been applied to learn individualized treatment rules, or rules for altering treatments over time in response to changes in individual covariates. Termed dynamic treatment regimes in the statistical literature, such individualized treatment rules are of primary importance in the practice of clinical medicine. History-Adjusted Marginal Structural Models (HA-MSM) estimate individualized treatment rules that assign, at each time point, the first action of the future static treatment plan that optimizes expected outcome given a patient's covariates. However, as we discuss here, the optimality of these rules can depend on the way in which treatment was assigned in …
Semiparametric Latent Variable Regression Models For Spatio-Temporal Modeling Of Mobile Source Particles In The Greater Boston Area, Alexandros Gryparis, Brent A. Coull, Joel Schwartz, Helen H. Suh
Semiparametric Latent Variable Regression Models For Spatio-Temporal Modeling Of Mobile Source Particles In The Greater Boston Area, Alexandros Gryparis, Brent A. Coull, Joel Schwartz, Helen H. Suh
Harvard University Biostatistics Working Paper Series
Traffic particle concentrations show considerable spatial variability within a metropolitan area. We consider latent variable semiparametric regression models for modeling the spatial and temporal variability of black carbon and elemental carbon concentrations in the greater Boston area. Measurements of these pollutants, which are markers of traffic particles, were obtained from several individual exposure studies conducted at specific household locations as well as 15 ambient monitoring sites in the city. The models allow for both flexible, nonlinear effects of covariates and for unexplained spatial and temporal variability in exposure. In addition, the different individual exposure studies recorded different surrogates of traffic …
A Diagnostic Test For The Mixing Distribution In A Generalised Linear Mixed Model, Eric J. Tchetgen, Brent A. Coull
A Diagnostic Test For The Mixing Distribution In A Generalised Linear Mixed Model, Eric J. Tchetgen, Brent A. Coull
Harvard University Biostatistics Working Paper Series
We introduce a diagnostic test for the mixing distribution in a generalised linear mixed model. The test is based on the difference between the marginal maximum likelihood and conditional maximum likelihood estimates of a subset of the fixed effects in the model. We derive the asymptotic variance of this difference, and propose a test statistic that has a limiting chi-square distribution under the null hypothesis that the mixing distribution is correctly specified. For the important special case of the logistic regression model with random intercepts, we evaluate via simulation the power of the test in finite samples under several alternative …
On The Violation Of Bounds For The Correlation In Generalized Estimating Equation Analyses Of Binary Data From Longitudinal Trials, Justine Shults, Wenguang Sun, Xin Tu, Jay Amsterdam
On The Violation Of Bounds For The Correlation In Generalized Estimating Equation Analyses Of Binary Data From Longitudinal Trials, Justine Shults, Wenguang Sun, Xin Tu, Jay Amsterdam
UPenn Biostatistics Working Papers
It is well-known that the correlation among binary outcomes is constrained by the marginal means, yet approaches such as generalized estimating equations (GEE) do not check that the constraints for the correlations are satisfied. We explore this issue for Markovian dependence in the context of a GEE analysis of a clinical trial that compares Venlafaxine with Lithium in the prevention of major depressive episode. We obtain simplified expressions for the constraints for the logistic model and the equicorrelated and first-order autoregressive correlation structures. We then obtain the limiting values of the GEE and quasi-least squares (QLS) estimates of the correlation …
Use Of Unbiased Estimating Equations To Estimate Correlation In Generalized Estimating Equation Analysis Of Longitudinal Trials, Wenguang Sun, Justine Shults, Mary Leonard
Use Of Unbiased Estimating Equations To Estimate Correlation In Generalized Estimating Equation Analysis Of Longitudinal Trials, Wenguang Sun, Justine Shults, Mary Leonard
UPenn Biostatistics Working Papers
In a recent publication, Wang and Carey (Journal of the American Statistical Association, 99, pp. 845-853, 2004) presented a new approach for estimation of the correlation parameters in the framework of generalized estimating equations (GEE). They considered correlated continuous, binary and count data with a generalized Markov correlation structure that includes the first-order autoregressive AR(1) and Markov structures as special cases. They made detailed comparisons with pseudo-likelihood (PL) and the first stage of quasi-least squares (QLS), a two-stage approach in the framework of generalized estimating equations (GEE). In this note we extend their comparisons for the second (bias corrected) stage …