Statistics and Probability Commons^™

Models For Data Analysis In Accelerated Reliability Growth, Cesar Alexander Ruiz Torres

Graduate Theses and Dissertations

This work develops new methodologies for analyzing accelerated testing data in the context of a reliability growth program for a complex multi-component system. Each component has multiple failure modes and the growth program consists of multiple test-fix stages with corrective actions applied at the end of each stage. The first group of methods considers time-to-failure data and test covariates for predicting the final reliability of the system. The time-to-failure of each failure mode is assumed to follow a Weibull distribution with rate parameter proportional to an acceleration factor. Acceleration factors are specific to each failure mode and test covariates. We …

Bayesian Analysis Of Binary Diagnostic Tests And Panel Count Data, Chunling Wang

Theses and Dissertations

This dissertation mainly explores several challenging topics that arise in diagnostic tests and panel count data in the Bayesian framework. Binary diagnostic tests, particularly multiple diagnostic tests with repeated measures and diagnostic procedures with a large number of raters, are studied. For panel count data, most traditional methods only handle panel count data for a single type of recurrent event. In this dissertation, we primarily focus on the case with multiple types of recurrent events.

In Chapter 1, an introduction to the binary diagnostic tests data and panel count data is presented and related literature works are briefly reviewed. To …

Small Area Estimation On Zero-Inflated Data Using Frequentist And Bayesian Approach, Kusman Sadik, Rahma Anisa, Euis Aqmaliyah

Journal of Modern Applied Statistical Methods

The most commonly used method of small area estimation (SAE) is the empirical best linear unbiased prediction method based on a linear mixed model. However, it is not appropriate in the case of the zero-inflated target variable with a mixture of zeros and continuously distributed positive values. Therefore, various model-based SAE methods for zero-inflated data are developed, such as the Frequentist approach and the Bayesian approach. Both approaches are compared with the survey regression (SR) method which ignores the presence of zero-inflation in the data. The results show that the two SAE approaches for zero-inflated data are capable to yield …

Applications Of Dynamic Linear Models To Random Allocation Models, Albert H. Lee Iii

Theses and Dissertations

Although advances in modern computational algorithms have provided researchers the ability to work problems which were once too computationally complex to solve, problems with high computation or large parameter spaces still remain. Problems such as those involving Time Series can be such problems. Chapter 1 looks at the the use of Exponentially Weighted Moving Averages developed by \citep{holt2004forecasting, winters1960forecasting} which were thought to provide sufficient solutions to these Time Series. A discussion is provided which illustrates the shortcomings of the EWMA and how its infinite number of possible starting values provides the modeler with an endless number of possible solutions …

Bayesian Approach To Finding The Most Likely Circuit Structure, Shannon Harms

Graduate Research Theses & Dissertations

Systems, and their reliabilities, depend on the reliabilities of the components that theyare composed of, and in this paper we want to nd the system structure that is the most likely given observed data. Bayesian methods were utilized in order to discover the posterior means, or observed reliabilities, of both the components and the systems. Assuming the serial and parallel system structures have independent components, we calculated system reliabilities based on observed component reliabilities by using the multiplication and addi- tion probability rules. We are then able to expand upon the numerical comparison method through a maximum likelihood analysis that …

On Improving Performance Of The Binary Logistic Regression Classifier, Michael Chang

UNLV Theses, Dissertations, Professional Papers, and Capstones

Logistic Regression, being both a predictive and an explanatory method, is one of the most commonly used statistical and machine learning method in almost all disciplines. There are many situations, however, when the accuracies of the fitted model are low for predicting either the success event or the failure event. Several statistical and machine learning approaches exist in the literature to handle these situations. This thesis presents several new approaches to improve the performance of the fitted model, and the proposed methods have been applied to real datasets.

Transformations of predictors is a common approach in fitting multiple linear and …

Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller

LSU Doctoral Dissertations

Several of the northwestern Gulf of Mexico (GOM) shelf-edge banks provide critical hard bottom habitat for coral and fish communities, supporting a wide diversity of ecologically and economically important species. These sites may be fish aggregation and spawning sites and provide important habitat for fish growth and reproduction. Already designated as habitat areas of particular concern, many of these banks are also under consideration for inclusion in the expansion of the Flower Garden Banks National Marine Sanctuary. This project aimed to gain a more comprehensive understanding of the communities and fish species on shelf-edge banks by way of gonad histology, …

A Bayesian Framework For Estimating Seismic Wave Arrival Time, Hua Zhong

Graduate Theses and Dissertations

Because earthquakes have a large impact on human society, statistical methods for better studying earthquakes are required. One characteristic of earthquakes is the arrival time of seismic waves at a seismic signal sensor. Once we can estimate the earthquake arrival time accurately, the earthquake location can be triangulated, and assistance can be sent to that area correctly. This study presents a Bayesian framework to predict the arrival time of seismic waves with associated uncertainty. We use a change point framework to model the different conditions before and after the seismic wave arrives. To evaluate the performance of the model, we …

Mle And Bayesian Methods To Analyze Data With Missing Values Below The Limit Of Detection, Xinxin Hu

Theses and Dissertations

As pesticides are widely used in agriculture, more and more people who work at places like farm are exposed to the pesticides. According to enviroment re- searches [Villarejo; 2003; Reigart and Roberts; 1999], being exposed to some kind of pesticides like Organophosphorus (OP) insecticides has significantly effected the health of farmworkers and their family. The actual level of pesticides can be detected with some limitation for now. However, it is hard to detect when the level is below the limit of detection (LOD). Therefore, the goal of our research is to propose several different methods to analyze data …

Exploring The Behavior Of Model Fit Criteria In The Bayesian Approximate Measurement Invariance: A Simulation Study, Abeer Atallah S. Alamri

USF Tampa Graduate Theses and Dissertations

Measurement invariance (MI) is conducted to ensure that differences found in the results of group comparisons are due to true substantive differences and not methodological artifacts. Previous cross-cultural and cross-national studies with large number of groups showed that the advanced measurement invariance level was rarely held when utilizing the traditional (frequentist) MI approach. The Bayesian approximate measurement invariance (BAMI) was introduced to override the traditional MI strict assumption, because trivial non-invariance in parameters across groups is allowed. Although the concept of the BAMI, which has been utilized since 2013, was incorporated into the context of structural equation modeling, there is …

Application Of A Hybrid Statistical–Dynamical System To Seasonal Prediction Of North American Temperature And Precipitation, Sarah Strazzo, Dan C. Collins, Andrew Schepen, Q. J. Wang, Emily Becker, Liweli Jia

Publications

Recent research demonstrates that dynamical models sometimes fail to represent observed teleconnection patterns associated with predictable modes of climate variability. As a result, model forecast skill may be reduced. We address this gap in skill through the application of a Bayesian postprocessing technique—the calibration, bridging, and merging (CBaM) method—which previously has been shown to improve probabilistic seasonal forecast skill over Australia. Calibration models developed from dynamical model reforecasts and observations are employed to statistically correct dynamical model forecasts. Bridging models use dynamical model forecasts of relevant climate modes (e.g., ENSO) as predictors of remote temperature and precipitation. Bridging and calibration …

Bayesian Hierarchical Meta-Analysis Of Asymptomatic Ebola Seroprevalence, Peter Brody-Moore

CMC Senior Theses

The continued study of asymptomatic Ebolavirus infection is necessary to develop a more complete understanding of Ebola transmission dynamics. This paper conducts a meta-analysis of eight studies that measure seroprevalence (the number of subjects that test positive for anti-Ebolavirus antibodies in their blood) in subjects with household exposure or known case-contact with Ebola, but that have shown no symptoms. In our two random effects Bayesian hierarchical models, we find estimated seroprevalences of 8.76% and 9.72%, significantly higher than the 3.3% found by a previous meta-analysis of these eight studies. We also produce a variation of this meta-analysis where we exclude …

Exploring A Bayesian Analysis Of Opinion Dynamics Using The Approximate Bayesian Computation Method, Jessica L. Bishop

Graduate Research Theses & Dissertations

Social media has created a whole new framework in the way we understand ones expression of opinion, and how ones' opinion can influence others. Models of opinion dynamics, such as a probabilistic modeling framework of opinion dynamics over time are given by Abir De, Isabel Valera, Niloy Ganguly, Sourangshu Bhattacharya, and Manuel Gomez Rodriguez in ``Learning and Forecasting Opinion Dynamics in Social Networks." In this paper, we will continue to explore their models, now coming from a Bayesian statistical standpoint, specifically looking at the Approximate Bayesian Computation (ABC) method for the computation of better estimations for the data. We will …

Evaluation Of Epilepsy Surgery Using Bayesian Multinomial Regression, Kacy Danielle Kane

Graduate Research Theses & Dissertations

We are exploring the effectiveness of brain surgeries that are supposed to eliminate or reduce the frequency of seizures in young Epilepsy patients. The long-term effectiveness of brain surgeries is evaluated by ordinal categories and brings longitudinal categorical responses.

Using a Bayesian multinomial regression model we examine the responses by the lobe of brain and other covariates as well as time. To overcome computational difficulties we utilize latent variables for multinomial responses and compare the results with frequentists methods.

Site- And Location-Adjusted Approaches To Adaptive Allocation Clinical Trial Designs, Brian S. Di Pace

Theses and Dissertations

Response-Adaptive (RA) designs are used to adaptively allocate patients in clinical trials. These methods have been generalized to include Covariate-Adjusted Response-Adaptive (CARA) designs, which adjust treatment assignments for a set of covariates while maintaining features of the RA designs. Challenges may arise in multi-center trials if differential treatment responses and/or effects among sites exist. We propose Site-Adjusted Response-Adaptive (SARA) approaches to account for inter-center variability in treatment response and/or effectiveness, including either a fixed site effect or both random site and treatment-by-site interaction effects to calculate conditional probabilities. These success probabilities are used to update assignment probabilities for allocating patients …

Bayesian And Semi-Bayesian Estimation Of The Parameters Of Generalized Inverse Weibull Distribution, Kamaljit Kaur, Kalpana K. Mahajan, Sangeeta Arora

Journal of Modern Applied Statistical Methods

Bayesian and semi-Bayesian estimators of parameters of the generalized inverse Weibull distribution are obtained using Jeffreys’ prior and informative prior under specific assumptions of loss function. Using simulation, the relative efficiency of the proposed estimators is obtained under different set-ups. A real life example is also given.

Bayesian Classification Methods For Bat Call Identification, Zhongmao Liu

Arts & Sciences Graduate Student Theses and Dissertations

Bat call classification is widely used in bat population monitoring in the field of ecology. Since bat populations are susceptible to changes in their surroundings, it is essential to monitor bat populations for purposes of bat protection and bio-environment protection. The purpose of this thesis is to compare the performance of several classification methods applied to a data set extracted from audio recordings for different species of bats in Mexico. The methods under comparison are (i) a nonparametric Bayesian approach using a multinomial probit model with Gaussian process prior; (ii) support vector machines (SVM); (iii) naive Bayes; and (iv) Bayesian …

Multivariate Analysis Of The Cotton Seed Ionome Reveals A Shared Genetic Architecture, Duke Pauli, Greg Ziegler, Min Ren, Matthew A. Jenks, Douglas J. Hunsaker, Min Zhang, Ivan Baxter, Michael A. Gore

Faculty & Staff Scholarship

To mitigate the effects of heat and drought stress, a better understanding of the genetic control of physiological responses to these environmental conditions is needed. To this end, we evaluated an upland cotton (Gossypium hirsutum L.) mapping population under water-limited and well-watered con- ditions in a hot, arid environment. The elemental concentrations (ionome) of seed samples from the pop- ulation were profiled in addition to those of soil samples taken from throughout the field site to better model environmental variation. The elements profiled in seeds exhibited moderate to high heritabilities, as well as strong phenotypic and genotypic correlations between elements …

Bayesian Semiparametric Methods For Analyzing Panel Count Data, Jianhong Wang

Theses and Dissertations

Panel count data commonly arise in epidemiological, social science, medical studies, in which subjects have repeated measurements on the recurrent events of interest at different observation times. Since the subjects are not under continuous monitoring, the exact times of those recurrent events are not observed but the counts of such events within the adjacent observation times are known. Panel count data can be considered as a special type of longitudinal data with a count response variable in the literature. Compared to the frequentist literature, very limited Bayesian approaches have been developed to analyze panel count data. In this dissertation, several …

A Linear-Linear Growth Model With Individual Change Point And Its Application To Ecls-K Data, Ping Zhang

Graduate Theses and Dissertations

The latent growth curve model with piecewise functions is a useful analytics tool to investigate the growth trajectory consisted of distinct phases of development in observed variables. An interesting feature of the growth trajectory is the time point that the trajectory changes from one phase to another one. In this thesis, we propose a simple computational pipeline to locate the change point under the linear-linear piecewise model and apply it to the longitudinal study of reading and math ability in early childhood (from kindergarten to eighth grade). In the first step, we conduct the hypothesis testing to filter out the …

Bayesian Approach On Short Time-Course Data Of Protein Phosphorylation, Casual Inference For Ordinal Outcome And Causal Analysis Of Dietary And Physical Activity In T2dm Using Nhanes Data., You Wu

Electronic Theses and Dissertations

This dissertation contains three different projects in proteomics and causal inferences. In the first project, I apply a Bayesian hierarchical model to assess the stability of phosphorylated proteins under short-time cold ischemia. This study provides inference on the stability of these phosphorylated proteins, which is valuable when using these proteins as biomarkers for a disease. in the second project, I perform a comparative study of different confounding-adjusted to estimate the treatment effect when the outcome variable is ordinal using observational data. The adjusted U-statistics method is compared with other methods such as ordinal logistic regression, propensity score based stratification and …

A Bayesian Variable Selection Method With Applications To Spatial Data, Xiahan Tang

Graduate Theses and Dissertations

This thesis first describes the general idea behind Bayes Inference, various sampling methods based on Bayes theorem and many examples. Then a Bayes approach to model selection, called Stochastic Search Variable Selection (SSVS) is discussed. It was originally proposed by George and McCulloch (1993). In a normal regression model where the number of covariates is large, only a small subset tend to be significant most of the times. This Bayes procedure specifies a mixture prior for each of the unknown regression coefficient, the mixture prior was originally proposed by Geweke (1996). This mixture prior will be updated as data becomes …

Peptide Identification: Refining A Bayesian Stochastic Model, Theophilus Barnabas Kobina Acquah

Electronic Theses and Dissertations

Notwithstanding the challenges associated with different methods of peptide identification, other methods have been explored over the years. The complexity, size and computational challenges of peptide-based data sets calls for more intrusion into this sphere. By relying on the prior information about the average relative abundances of bond cleavages and the prior probability of any specific amino acid sequence, we refine an already developed Bayesian approach in identifying peptides. The likelihood function is improved by adding additional ions to the model and its size is driven by two overall goodness of fit measures. In the face of the complexities associated …

Regularized Neural Network To Identify Potential Breast Cancer: A Bayesian Approach, Hansapani S. Rodrigo, Chris P. Tsokos, Taysseer Sharaf

Journal of Modern Applied Statistical Methods

In the current study, we have exemplified the use of Bayesian neural networks for breast cancer classification using the evidence procedure. The optimal Bayesian network has 81% overall accuracy in correctly classifying the true status of breast cancer patients, 59% sensitivity in correctly detecting the malignancy and 83% specificity in correctly detecting the non-malignancy. The area under the receiver operating characteristic curve (0.7940) shows that this is a moderate classification model.

Methods To Account For Breed Composition In A Bayesian Gwas Method Which Utilizes Haplotype Clusters, Danielle F. Wilson-Wells

Department of Statistics: Dissertations, Theses, and Student Research

In livestock, prediction of an animal’s genetic merit using genomic information is becoming increasingly common. The models used to make these predictions typically assume that we are sampling from a homogeneous population. However, in both commercial and experimental populations the sire and dam of an individual may be a mixture of different breeds. Haplotype models can capture this population structure.

Two models based on breed specific haplotype clusters where developed to account for differences across multiple breeds. The first model utilizes the breed composition of the individual, while the second utilizes the breed composition from the sire and dam. Haplotype …

Teaching The Quandary Of Statistical Jurisprudence: A Review-Essay On Math On Trial By Schneps And Colmez, Noah Giansiracusa

Journal of Humanistic Mathematics

This review-essay on the mother-and-daughter collaboration Math on Trial stems from my recent experience using this book as the basis for a college freshman seminar on the interactions between math and law. I discuss the strengths and weaknesses of this book as an accessible introduction to this enigmatic yet deeply important topic. For those considering teaching from this text (a highly recommended endeavor) I offer some curricular suggestions.

Development And Application Of Bayesian Semiparametric Models For Dependent Data, Junshu Bao

Theses and Dissertations

Dependent data are very common in many research fields, such as medicine (repeated measures), finance (time series), traffic (clustered), etc. Effective control/modeling of the dependency among data can enhance the performance of the models and result in better prediction. In many cases, the correlation itself may be of great interest. In this dissertation, we develop novel Bayesian semi-/nonparametric regression models to analyze data with various dependence structures. In Chapter 2, a Bayesian non- parametric multivariate ordinal regression model is proposed to fit drinking behavior survey data from DWI offenders. The responses are two-dimensional ordinal data, drinking frequency and drinking quantity …

Bayesian Nonparametric Approaches To Multiple Testing, Density Estimation, And Supervised Learning, William Cipolli Iii

Theses and Dissertations

This dissertation presents methods for several applications of Polya tree models. These novel nonparametric approaches to the problems of multiple testing, density estimation and supervised learning provide an alternative to other parametric and nonparametric models. In Chapter 2, the proposed approximate finite Polya tree multiple testing procedure is very successful in correctly classifying the observations with non-zero mean in a computationally efficient manner; this holds even when the non-zero means are simulated from a mean-zero distribution. Further, the model is capable of this for “interestingly different” observations in the cases where that is of interest. Chapter 3 proposes discrete, and …

A Comparison Of Estimation Methods For Nonlinear Mixed-Effects Models Under Model Misspecification And Data Sparseness: A Simulation Study, Jeffrey R. Harring, Junhui Liu

Journal of Modern Applied Statistical Methods

A Monte Carlo simulation is employed to investigate the performance of five estimation methods of nonlinear mixed effects models in terms of parameter recovery and efficiency of both regression coefficients and variance/covariance parameters under varying levels of data sparseness and model misspecification.

Inference For A Zero-Inflated Conway-Maxwell-Poisson Regression For Clustered Count Data., Hyoyoung Choo-Wosoba

Electronic Theses and Dissertations

This dissertation is directed toward developing a statistical methodology with applications of the Conway-Maxwell-Poisson (CMP) distribution (Conway, R. W., and Maxwell, W. L., 1962) to count data. The count data for this dissertation exhibit three different characteristics: clustering, zero inflation, and dispersion. Clustering suggests that observations within clusters are correlated, and the zero inflation phenomenon occurs when the data exhibit excessive zero counts. Dispersion implies that the mean is greater/smaller than the variance unlike a Poisson distribution. The dissertation starts with an introduction of inference for a zero-inflated clustered count data in the first chapter. Then, it presents novel methodologies …