Physics Commons^™

Feedback Indices To Evaluate Llm Responses To Rebuttals For Multiple Choice Type Questions, Justin C. Dunlap, Anne-Simone Parent, Ralf Widenhorn

Physics Faculty Publications and Presentations

We present a set of indices designed to characterize Large Language Model (LLM) responses when challenged with rebuttals during a chat. Assessing how LLMs respond to user dissent is crucial for understanding their reliability and behavior patterns, yet the complexity of human-LLM interactions makes systematic evaluation challenging. Our approach employs a fictitious-response rebuttal method that quantifies LLM behavior when presented with multiple-choice questions followed by deliberate challenges to their fictitious previous response. The indices are specifically designed to detect and measure what could be characterized as sycophantic behavior (excessive agreement with user challenges) or stubborn responses (rigid adherence to the …

Detecting And Correcting Systematic Image Distortion In Digital Atomic-Resolution Images From Crystals: Projected Symmetry Of Graphite Calibration Samples For Scanning Prove Microscopy And Subperiodic Crystals For Aberration-Corrected Transmission Electron Microscopy, Tyler Michael Bortel

Dissertations and Theses

Though it is an impressive technology, Scanning Tunneling Microscopy (STM) produces images commonly plagued by small systematic errors, often called "drift". These effects have a variety of causes, most notably nonlinear behavior of piezoelectric actuator tubes responsible for the positioning of the scanning probe or sample. One result of these distortions is a potential incorrect classification of the symmetry groups and projected Laue classes of recorded images from crystals—made possible by using recently developed objective methods. An implementation of a known method for detecting and correcting these errors is presented. This method operates strictly in Fourier space so as to …

Rapid-Prototyping Nanofabrication: Lcd-Based Projection Lithography And Physical Vapor Deposition, Sabeel Saleem Mohammmed

University Honors Theses

The semiconductor industry's continued growth, driven in large part by demand for artificial intelligence hardware, has highlighted the need for greater workforce development in regions adjacent to major fabrication centers like Oregon's Silicon Forest. This capstone project lays the groundwork for a small scale and student led semiconductor fabrication lab at Portland State University by demonstrating two of the core steps in chip manufacturing: photolithography and thin film deposition. Rather than relying on conventional fixed reticles, this work explores a unique, low cost approach to patterning that uses an ultraviolet-compatible liquid crystal display (LCD) as a programmable reticle, allowing arbitrary …

The Method Of Periodic Averaging Applied To Reduced Coupled Mode Theory Models For Fiber Laser Amplifiers, Rebecca Nicole Bryant

Dissertations and Theses

Fiber laser amplifier (FLA) models are often implemented without rigorous mathematical justification or thorough numerical validation. Without a proper theoretical basis for assumptions and approximations, or a technical analysis of model performance, there is significant uncertainty about the limitations of any given reduced model and its suitability for an application. This research aims to address the lack of comprehensive assessment of FLA models by directly comparing distinct models and recommending a mathematical alternative to replace heuristic model-reduction techniques. The work in this dissertation is divided into two projects: a comparative study that uses existing FLA models to assess the validity …

Developing A High-Resolution Off-Axis Common-Mode Digital Holographic Microscope, Lucy Cook

University Honors Theses

Off-axis digital holographic microscopy (DHM) is a powerful tool for 3D, non-invasive live-cell tracking without moving parts. However, traditional setups face an inherent dilemma: split-path interferometers offer high spatial resolution but poor temporal stability, while more stable common-mode configurations are historically limited to lower numerical aperture (NA) regimes. This thesis bridges that gap by scaling a common-mode DHM architecture into a high-resolution benchtop instrument featuring NA = 0.65 objectives, paired with a high-power 520 nm laser source to combat transmission losses and sustain imaging frame rates across an expanded optical footprint. We map the multi-variable design space required to satisfy …

Modeling Turbulent Accretion Flows Around Black Holes: Azimuthal Flux Derivative Density Curves In 3d Mhd Simulations, Sasmitha Purushothaman, Matthew D. Duez, Pavan Chawhan

University Honors Theses

When modeling two-dimensional axisymmetric accretion disks around Kerr black holes, setting the azimuthal terms of the MHD equations to zero causes the loss of turbulence and dynamo effects. In this paper, we use three-dimensional models to identify the turbulence that arises from azimuthal flux derivatives (AFDs) and create probability density functions to characterize them. We establish a pipeline for calculating the AFDs, creating a distribution, and normalizing it. Then, we plot the dependence of the conditional probability of the AFDs on density, magnetic field strength, and velocity for the continuity and magnetic induction equations. Future research can take this information …

An Infinite Set Of One-Range Addition Theorems Without An Infinite Second Series, For Slater Orbitals And Their Derivatives, Applicable To Multiple Coordinate Systems, Jack C. Straton

Physics Faculty Publications and Presentations

Addition theorems have been indispensable tools for the reduction of quantum transition amplitudes. They are normally utilized at the start of the process to move the angular dependence within plane waves, Coulomb potentials, and the like, into a sum over spherical harmonics that allows the angular integration to be carried out. These have historically been “two-range” addition theorems, characterized by the two-fold notation r>=Max[r1,r2] and r< =Min[r1,r2] and comprising a single infinite series. More recently, “one-range” addition theorems have been created that have no such piecewise notation, but at the cost of the introduction of another infinite series. We use a very different approach to derive an infinite set of addition theorems for Slater orbitals, hydrogenic and Hylleraas wave functions, and so on, that retain the one-range variable dependence but have, at worst, a finite second series rather than an infinite one. In addition, unlike previous addition theorems, they are applicable to more than one coordinate system. One of these addition theorems may also be used for Yukawa-like functions that may appear late in the reduction of amplitude integrals, and we show its utility for an integral that has stubbornly defied reduction to analytic form for nearly sixty years. Finally, we craft indefinite integrals of 15 half-integer Macdonald functions multiplied by (inverse) powers and negative exponentials containing squares of the integration variable.

Multiple-Valued Quantum Automata For Robotics, Yuchen Huang

Dissertations and Theses

This dissertation introduces a new type of quantum automata, their encoding and circuit realization. I concentrate on possible applications in robotics. Several methods and application of quantum automata and quantum circuit-based controllers for elementary robotic systems, with a focus on humanoid robot motion, emotion, and behavior generation are illustrated in detail. The research introduces several novel methodologies that bridge quantum computing principles with robotic control, aiming to overcome the limitations of classical deterministic and probabilistic approaches.

The dissertation first presents a quantum-circuit-based framework for generating non-repetitive and expressive (e)motions in a humanoid robot actor, using superposition and entanglement to produce …

Microbial Communities Of Selected Regions Of The Deep Springs Lake Aquifer System, Rania Zaki, Emma Bourne, Andrew Storino, Jay Nadeau

Physics Faculty Publications and Presentations

Deep Springs Lake is a small, isolated, highly alkaline soda lake in Inyo County of Eastern California, USA. It is a seasonally filled salt lake or playa, and is part of a closed aquifer system. Such closed systems are globally rare, occurring only in arid zones where annual evaporation is greater than annual rainfall. Deep Springs Lake’s hydrology and geology have been well studied, and it is home to a unique toad species, but its microbiome remains unexplored. Here we perform 16S, 18S, and ITS amplicon sequencing of the lake water, dried salt crust at the edges the lake, and …

Synthesis And Characterization Of Highly Stable Fisetin Encapsulated In Lecithin-Chitosan-Savie Nanoparticles, Hart Monyatovsky, Travis Anderson, Jay Nadeau

Physics Faculty Publications and Presentations

Senolytic drugs, of the class of polyphenolic flavonoids, have attracted attention for a wide variety of medical applications for which they may be delivered topically, orally, and/or intravenously. However, due to their hydrophobicity and sensitivity to light and oxygen, they have been proven difficult to package and deliver. Here we report a synthesis method for encapsulated fisetin using lecithin-chitosan ionic gelation with a recently reported surfactant that is an alternative to polyethylene glycol (PEG)-containing compounds. Called “Savie” for a contraction of its components, sarcosine-Vitamin E, this surfactant allows for production of sub-100 nm nanoparticles that are bench stable for at …

Guided Modes Through The Dual Perspectives Of Geometrical Optics And Wave Equation, Mason Spears

Mathematics and Statistics Undergraduate Departmental Honors Theses

In an optical waveguide, only finitely many electric field intensity profiles travel without loss, and these are aptly named guided modes. This paper uses fundamental concepts from the two paradigms of interpreting light, geometrical and physical optics, to derive guided modes axiomatically. First, basic principles of geometrical optics are demonstrated in a slab waveguide to explain characteristics of optical waveguides such as total internal reflection and numerical aperture. Dispersion curves are assembled from the same principles and used to show that only finitely many guided modes exist for a given waveguide. Next, Maxwell’s equations are used to derive the famous …

A Veblenian Approach To Chaos Theory, Isaiah Henry

Hatfield Graduate Journal of Public Affairs

This paper provides a comparative analysis of Veblen's belief in disequilibrium, the field of chaos theory, and how these two frameworks connect. We explore the similarities and differences between Veblen's theories and the principles of chaos theory, including their shared emphasis on complexity and unpredictability. By analyzing the connections between Veblen's economic theories and chaos theory, we can gain a deeper understanding of the nature of disequilibrium and the complex forces that shape our world.

Teaching Diffuse, Specular, And Total Internal Reflection Via A Halo Effect, Paul R. Destefano, Ralf Widenhorn

Physics Faculty Publications and Presentations

Interesting and pedagogically useful physics can be found in the halo produced by a laser pointer directed into a shallow body of water. We describe a simple model for this phenomenon using geometric optics and support this model with empirical evidence. We also discuss and verify extensions to this model that explain variations in the visual pattern. These variants include a double halo pattern and a disk of dim light that can be produced with minor modifications of the single halo configuration. Although the level of complexity differs, all of these models rely on the same ray optics, specifically refraction …

Glacial-Interglacial And Millennial-Scale Changes In Nitrous Oxide Emissions Pathways And Source Regions, J. A. Menking, J. E. Lee, E. J. Brook, J. Schmitt, L. Soussaintjean, H. Fischer, J. Kaiser, A. Rice

Physics Faculty Publications and Presentations

During the transition from the Last Glacial Maximum (LGM) to the Holocene, the atmospheric N2O mole fraction increased by 80 nmol mol−1. Using ice core measurements of N2O isotopomer ratios, we show that this increase was driven by increases in both nitrification and denitrification, with the relative partitioning between both production pathways depending on the assumed isotopic end‐member source signatures. Similarly, we also attribute a 35 nmol mol−1 N2O mole fraction increase during the Heinrich Stadial 4/Dansgaard Oeschger 8 (HS4/DO8) millennial‐scale event to increases in both N2O production pathways. In contrast, the 25 nmol mol−1 N2O mole fraction decrease during …

Extant Life Detection Using Label-Free Video Microscopy In Analog Aquatic Environments, Carl D. Snyder, Manuel Bedrossian, Casey Barr, Jody W. Deming, Chris A. Lindensmith, Christian Stenner, Jay L. Nadeau

Physics Faculty Publications and Presentations

The ability of microbial active motion, morphology, and optical properties to serve as biosignatures was investigated by in situ video microscopy in a wide range of extreme field sites where such imaging had not been performed previously. These sites allowed for sampling seawater, sea ice brines, cryopeg brines, hypersaline pools and seeps, hyperalkaline springs, and glaciovolcanic cave ice. In all samples except the cryopeg brine, active motion was observed without any sample treatment. Active motion was observed in the cryopeg brines when samples were subjected to a temperature gradient above in situ. In general, levels of motility were low in …

Layout-Aware Quantum Circuitry And Algorithmic Extensions To Grover's Algorithm, Ali Al-Bayaty

Dissertations and Theses

Lov K. Grover introduced, in 1996, Grover's algorithm as a quantum search algorithm to find all solutions for quantum oracles representing classical problems. My research observed that the Grover diffusion operator of Grover's algorithm gives wrong solutions when Boolean oracles are designed in some logical structures. Therefore, I invented the new "controlled-diffusion operator" for Boolean oracles as a new approach for Grover's algorithm that always correctly solves the problem of Grover's algorithm.

Another important problem in quantum computing is designing reliable and cost-effective quantum gates using reversible binary logic. In classical logic design, the stage of logic design can be …

3F4 Hypergeometric Functions As A Sum Of A Product Of 1F2 Functions, Jack C. Straton

Physics Faculty Publications and Presentations

This paper shows that certain ₃F₄ hypergeometric functions can be expanded in sums of pair products of ₁F₂ functions. In special cases, the ₃F₄ hypergeometric functions reduce to ₂F₃ functions. Further special cases allow one to reduce the ₂F₃ functions to ₁F₂ functions, and the sums to products of ₀F₁ (Bessel) and ₁F₂ functions. The class of hypergeometric functions with summation theorems are thereby expanded beyond those expressible as pair-products of ₂F₁ functions, ₃F₂ functions, and generalized Whittaker functions, into …

Descending An Inclined Plane With A Large Language Model, Justin C. Dunlap, Ryan Sissons, Ralf Widenhorn

Physics Faculty Publications and Presentations

[This paper is part of the Focused Collection in Artificial Intelligence Tools in Physics Teaching and Physics Education Research.] We present a study in which a version of a common conservation of mechanical energy introductory physics problem, an object released on an inclined plane, is given to OpenAI’s GPT-4 large language model (LLM). We investigate how different permutations of object, action verb, and property of the incline impact the responses of the LLM. The problem setup and prompting was left purposefully minimal, requiring the LLM to state multiple assumptions to justify the final answer. We specifically studied how different keywords …

Summed Series Involving 1F2 Hypergeometric Functions, Jack C. Straton

Physics Faculty Publications and Presentations

Summation of infinite series has played a significant role in a broad range of problems in the physical sciences and is of interest in a purely mathematical context. In a prior paper, we found that the Fourier–Legendre series of a Bessel function of the first kind J_N(kx) and modified Bessel functions of the first kind I_N(kx) lead to an infinite set of series involving ₁F₂ hypergeometric functions (extracted therefrom) that could be summed, having values that are inverse powers of the eight primes 1/ ( 2ⁱ 3^j 5^{k …}

Monitoring Water Meniscus Formation At Nanocontacts With Shear-Force Acousto Near-Field Microscopy, Xiaohua Wang, Rodolfo Fernandez, Theodore Brockman, Kacharat Supichayanggoon, Andres H. La Rosa

Physics Faculty Publications and Presentations

Shear-force acoustic near-field microscopy (SANM) is employed to monitor stochastic formation and post dynamic response of a water meniscus that bridges a tapered gold probe (undergoing lateral oscillations of a few nanometers amplitude at constant frequency) and a flat (gold or silicon oxide) substrate. As the probe further approaches the substrate, its amplitude decreases. Shear forces (of yet unknown precise origin) are typically invoked to explain the apparently pure damping effects affecting the probe's motion. Herein, SANM measurements underscore instead the role of near-field acoustic emission from the water meniscus as an elastic energy dissipation channel involved in shear interactions. …

Pt-Symmetry And Eigenmodes, Tamara Gratcheva

University Honors Theses

Spectra of systems with balanced gain and loss, described by Hamiltonians with parity and time-reversal (PT) symmetry is a rich area of research. This work studies by means of numerical techniques, how eigenvalues and eigenfunctions of a Schrodinger operator change as a gain-loss parameter changes. Two cases on a disk with zero boundary conditions are considered. In the first case, within the enclosing disk, we place a parity (P) symmetric configuration of three smaller disks containing gain and loss media, which does not have PT-symmetry. In the second case, we study a PT-symmetric configuration …

Motion History Images: A New Method For Tracking Microswimmers In 3d, Max Riekeles, Hadi Albalkhi, Megan Marie Dubay, Jay Nadeau, Christian A. Lindensmith

Physics Faculty Publications and Presentations

Quantitative tracking of rapidly moving micron-scale objects remains an elusive challenge in microscopy due to low signal-to-noise. This paper describes a novel method for tracking micron-sized motile organisms in off-axis Digital Holographic Microscope (DHM) raw holograms and/or reconstructions. We begin by processing the microscopic images with the previously reported Holographic Examination for Life-like Motility (HELM) software, which provides a variety of tracking outputs including motion history images (MHIs). MHIs are stills of videos where the frame-to-frame changes are indicated with color time-coding. This exposes tracks of objects that are difficult to identify in individual frames at a low signal-to-noise ratio. …

Going Down An Incline With Chatgpt, Corey R. Sissons

Student Research Symposium

In our Large Language Model (LLM) research, examining ChatGPT 4, we devised a physics problem involving an object descending an inclined plane. Through variations in terminology such as "rolling," "sliding," "solid sphere," "hollow sphere," "wooden ramp," "no-slip ramp," and more, we sought to evaluate LLM responses for different scenarios. Our analysis aimed to discern whether the LLM’s answers exhibited expertise in the field of physics. This experiment sheds light on LLM’s ability to give accurate and precise physics answers as well as variation in responses to nuanced changes in problem formulation. This provides valuable insights into its proficiency and potential …

Development Of A Two-Photon Laser Scanning Microscope, Jess Hollenbaugh

Student Research Symposium

The objective of this project was to convert a Sarastro 2000 confocal laser scanning microscope into a system capable of imaging using two-photon excitation (TPE) fluorescence for the use of the PSU biology department. TPE microscopy operates on the ability of fluorophores to accept two photons each with half the energy of a desired transition in a single quantum event via a virtual energy state and then emit a higher energy photon upon relaxation. This is preferable to single-photon excitation (SPE) due to the lower energy photons causing less damage to delicate biological samples. The adaptation process included physically altering …

Neutron Time Of Flight Spectrometry As A Diagnostic Tool For Inertial Electrostatic Confinement Fusion Plasmas, Andrew H. Dempsey, Erik J. Sanchez

Student Research Symposium

Inertial electrostatic confinement (IEC) is a method for achieving fusion of light nuclei wherein ions are injected into a spherically symmetric system of concentric electrodes. When the innermost electrode is held at negative high voltage with respect to the outer electrode, ions injected into the reactor at cathode (ground) potential accelerate toward the anode where they may undergo collisions with sufficient energy to overcome Coulomb repulsion and achieve nuclear fusion. The most commonly used IEC fusion fuels are deuterium-deuterium (D-D) and deuterium-tritium (D-T). Both fuels undergo fusion reactions that result in production of fast neutrons with distinct energies. Neutron production …

Reed Research Reactor Neutron Beam Characterization And Analysis, Vee Bartko, Jerry Newhouse

Student Research Symposium

Using neutron activation analysis of 99% pure gold foils, the authors characterize the neutron dose and shape of the neutron beam at the Reed Research Reactor (RRR). The experimental procedure followed extensive modeling in Monte Carlo N-Particle (MCNP) and Tool for Particle Simulation (TOPAS) simulations, in which the beam was projected to be roughly collimated. The shape, defined in terms of neutron flux, was measured by placing the foils directly on top of the neutron beam cap at powers of 1, 5, and 10 kilowatts. The flux was then converted to neutron dose via the Nuclear Regulatory Commission's neutron fluence …

Development Of A Fast-Neutron Source Localization System, Abdulsalam F. Al Mutairi

Student Research Symposium

Power generation by nuclear fusion is a continuing ambition that has been the focus of nuclear fusion research for nearly a hundred years. However, small-scale fusion reactors have further propulsion and neutron imaging applications that don’t require greater than breakeven efficiencies that a fusion energy source needs. Inertial Electrostatic Confinement (IEC) fusion devices have the potential for miniaturization, making them a strong candidate for such applications. Yet the contributions of different interactions within an IEC fusion device are still not fully understood. Imaging an IEC device and investigating each interaction's Neutron Production Rate (NPR) can enhance design efficiency. Neutron imaging …

Fluorescence Microscopy With Deep Uv, Near Uv, And Visible Excitation For In Situ Detection Of Microorganisms, Noel Case, Nikki Johnston, Jay Nadeau

Physics Faculty Publications and Presentations

We report a simple, inexpensive design of a fluorescence microscope with light-emitting diode (LED) excitation for detection of labeled and unlabeled microorganisms in mineral substrates. The use of deep UV (DUV) excitation with visible emission requires no specialized optics or slides and can be implemented easily and inexpensively using an oblique illumination geometry. DUV excitation (<280 >nm) is preferable to near UV (365 nm) for avoidance of mineral autofluorescence. When excited with DUV, unpigmented bacteria show two emission peaks: one in the near UV ∼320 nm, corresponding to proteins, and another peak in the blue to green range, corresponding to …

Spectroscopic End Point Detection With An Electron Beam Evaporator, Ryan Mcgraw

University Honors Theses

Spectroscopic end point detection is a common tool used for measuring slope changes in wavelength intensity. Using algorithms able to apply this concept, coatings will be able to be dynamically measured in real time and stopped at the appropriate level to ensure process uniformity. It is currently applied to reductive processes such as etching, where the surface will start to be eaten away, creating a plasma. When the entire amount of a material on a substrate has been eaten away, the plasma will change color as it is beginning to etch a different material. Using a spectrometer, this point where …

Open-Inquiry Opens Doors To Intriguing Optics Experiments At Home: A Case Study, Paul R. Destefano, Ralf Widenhorn

Physics Faculty Publications and Presentations

[This paper is part of the Focused Collection on Instructional labs: Improving traditions and new directions.] This manuscript presents a case study of an introductory physics student who, during the remote learning conditions imposed during the COVID-19 pandemic, found inspiration within a new, openinquiry, project-based, laboratory curriculum designed at Portland State University. The phenomenon investigated by the study subject was intriguing to both the student and the lab instructors for its unfamiliar and instructive optical effect: a ring-shaped pattern or halo created by a laser diffusely reflected in a shallow body of water. Drawing on classwork and interview responses, this …