Oceanography and Atmospheric Sciences and Meteorology Commons^™

Multi-Doppler Radar Wind Retrieval Data For Deep Convective Cloud Observed On May 11, 2020, Mariko Oue, Kirk North, Andrea Neumann

SoMAS Research Data

The US Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) program’s Southern Great Plains (SGP) site includes a heterogeneous distributed scanning Doppler radar network suitable for collecting coordinated Doppler velocity measurements in deep convective clouds. The surrounding National Weather Service (NWS) Next Generation Weather Surveillance Radar 1988 Doppler (NEXRAD WSR-88D) further supplements this network. The multi-Doppler radar reflectivity and velocity measurements are assimilated in a three-dimensional variational (3DVAR) algorithm to retrieve horizontal and vertical air motions in deep convective clouds. The data includes the 3D wind fields retrieved over a large analysis domain (100 km x 100 km) at storm-scale …

Multi-Doppler Radar Wind Retrieval Data For Deep Convective Clouds Observed In The Southern Great Plains On May 11, 2011, Mariko Oue, Kirk North, Andrea Neumann

SoMAS Research Data

The US Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) program’s Southern Great Plains (SGP) site includes a heterogeneous distributed scanning Doppler radar network suitable for collecting coordinated Doppler velocity measurements in deep convective clouds. The surrounding National Weather Service (NWS) Next Generation Weather Surveillance Radar 1988 Doppler (NEXRAD WSR-88D) further supplements this network. The multi-Doppler radar reflectivity and velocity measurements are assimilated in a three-dimensional variational (3DVAR) algorithm to retrieve horizontal and vertical air motions in deep convective clouds. The data includes the 3D wind fields retrieved over a large analysis domain (100 km x 100 km) at storm-scale …

Copepod Feeding Strategy Determines Response To Seawater Viscosity: Videography Study Of Two Calanoid Copepod Species, Abigail Tyrell

SoMAS Research Data

Calanoid copepods, depending on feeding strategy, have different behavioral and biological controls on their movements, thereby responding differently to environmental conditions such as changes in seawater viscosity. To understand how copepod responses to environmental conditions are mediated through physical, physiological, and/or behavioral pathways, we used high-speed microvideography to compare two copepod species, Acartia hudsonica and Parvocalanus crassirostris, under different temperature, viscosity, and dietary conditions. Acartia hudsonica exhibited “sink and wait” feeding behavior and typically responded to changes in seawater viscosity; increased seawater viscosity reduced particle-capture behavior and decreased the size of the feeding current. In contrast, P. crassirostris continuously …

A Multi-Platform, In-Situ Kinematic And Microphysical Analysis Of A Parallel Stratiform-Mesoscale-Convective System, Andrea Neumann, Michael Poellet, David J. Delene, Mark Askelson, Kirk North, Mariko Oue

Datasets

The North Dakota Citation Research Aircraft obtained measurements of stratiform precipitation clouds within mesoscale convective systems over Oklahoma during the spring of 2011 (MC3E) in conjunction with a multitude of ground- and airborne-based remote sensing instruments. The Citation was used to take measurements of base atmospheric variables as well as cloud and precipitation properties. Cloud droplet properties were measured by the Cloud Imaging Probe (CIP), Two-Dimensional Cloud probe (2D-C), the High-Volume Precipitation Spectrometer Version 3 (HVPS3) probe, with the spectra from these probes combined to create a single drop size distribution. The Atmospheric Radiation Measurement (ARM) program ran three X-Band …

Size And Density Of Upside-Down Jellyfish, Cassiopea Sp., And Their Impact On Benthic Fluxes In A Caribbean Lagoon, Chester B. Zarnoch, Noshin Hossain, Erika Fusco, Mary Alldred, Timothy J. Hoellein, Sophia Perdikaris

School of Global Integrative Studies: Faculty Publications

Anthropogenic disturbances may be increasing jellyfish populations globally. Epibenthic jellyfish are ideal organisms for studying this phenomenon due to their sessile lifestyle, broad geographic distribution, and prevalence in near-shore coastal environments. There are few studies, however, that have documented epibenthic jellyfish abundance and measured their impact on ecological processes in tropical ecosystems. In this study, the density and size of the upside-down jellyfish (Cassiopea spp.) were measured in Codrington Lagoon, Barbuda. A sediment core incubation study, with and without Cassiopea, also was performed to determine their impact on benthic oxygen and nutrient fluxes. Densities of Cassiopea were 24–168 …

David Quentin Bowen: A Memorial, John T. Andrews, David R. Bridgland, Peter U. Clark, Thomas M. Cronin, Claude Hillaire-Marcel, Darrel Maddy, Gifford H. Miller, Daniel R. Muhs, Colin V. Murray-Wallace

United States Geological Survey: Staff Publications

The Quaternary community lost a giant and a leader on October 5, 2020, when David Quentin Bowen, known to many as “DQ” and founding editor of Quaternary Science Reviews, passed away in Cardiff. Born on February 14, 1938 in Llanelli, SouthWales, he received his PhD at University College London. David’s 50 years of contributions to our science cannot be adequately summarized in a brief memorial but past, present, and future generations of Quaternary scientists will long remember his landmark achievements in publishing, his scientific contributions, and his personal and professional class in all his endeavors.

Testing Glacial Isostatic Adjustment Models Of Last-Interglacial Sea Level History In The Bahamas And Bermuda, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Eugene S. Schweig, Mark P. Rowe

United States Geological Survey: Staff Publications

Part of the spatial variation in the apparent sea-level record of the last interglacial (LIG) period is due to the diverse response of coastlines to glacial isostatic adjustment (GIA) processes, particularly where coastlines were close to the Laurentide Ice Sheet during the past two glacial periods. We tested modeled LIG paleo-sea levels on New Providence Island (NPI), Bahamas and Bermuda by investigating emergent coral patch reefs and oolitic/peloidal beach deposits. Corals with closed-system histories collected from patch reefs on NPI have ages of 128-118 ka and ooids/peloids from beach ridges have closed-system ages of 128-116 ka. Elevations of patch reefs …

Uptake, Metabolism, And Elimination Of Fungicides From Coated Wheat Seeds In Japanese Quail (Coturnix Japonica), Michael S. Gross, Thomas G. Bean, Michelle L. Hladik, Barnett A. Rattner, Kathryn M. Kuivila

United States Geological Survey: Staff Publications

Pesticides coated to the seed surface potentially pose an ecological risk to granivorous birds that consume incompletely buried or spilled seeds. To assess the toxicokinetics of seeds treated with current-use fungicides, Japanese quail ( Coturnix japonica) were orally dosed with commercially coated wheat seeds. Quail were exposed to metalaxyl, tebuconazole, and fludioxonil at either a low dose (0.0655, 0.0308, and 0.0328 mg/kg of body weight, respectively) or a high dose (0.196, 0.0925, and 0.0985 mg/kg of body weight, respectively). Fungicides were rapidly absorbed and distributed to tissues. Tebuconazole was metabolized into tert-butylhydroxy-tebuconazole. All compounds were eliminated to below detection limits …

Adjusting The Lens Of Invasion Biology To Focus On The Impacts Of Climate-Driven Range Shifts, Piper D. Wallingford, Toni Lyn Morelli, Jenica M. Allen, Evelyn M. Beaury, Dana M. Blumenthal, Bethany A. Bradley, Jeffrey S. Dukes, Regan Early, Emily J. Fusco, Deborah E. Goldberg, Inés Ibáñez, Brittany B. Laginhas, Montserrat Vilà, Cascade J.B. Sorte

United States Geological Survey: Staff Publications

As Earth’s climate rapidly changes, species range shifts are considered key to species persistence. However, some range-shifting species will alter community structure and ecosystem processes. By adapting existing invasion risk assessment frameworks, we can identify characteristics shared with high-impact introductions and thus predict potential impacts. There are fundamen- tal differences between introduced and range-shifting species, primarily shared evolutionary histories between range shifters and their new community. Nevertheless, impacts can occur via analogous mechanisms, such as wide dispersal, community disturbance and low biotic resistance. As ranges shift in response to climate change, we have an opportunity to develop plans to facilitate …

Agenda, Hampton Roads Sea Level Rise/Flooding Adaptation Forum 2020, Ben Mcfarlane, Wie Yusuf

July 31, 2020: Site-Level Resilience Strategies

Agenda for the Hampton Roads Sea Level Rise/Flooding Adaptation Forum on July 31, 2020 via Virtual Forum.

Bioaccumulation And Biomagnification Of Potential Toxic Elements (Ptes): An Avicennia Germinans–Uca Rapax Trophic Transfer Story From Jobos Bay, Puerto Rico, Michael Martinez-Colon, Henry Alegria, Hatice Kubra-Gul, Ashley Huber, Perihan Kurt-Karakus

USF St. Petersburg Campus Faculty Publications

In southern Puerto Rico along the coastline bordering the Jobos Bay National Estuarine Research Reserve, environmental encroachment has exposed mangrove forest to different sources of pollution. Potentially toxic element concentrations from the F1Tess (exchangeable), F4Tess (oxidizable), mangrove leaf litter (MLL), and fiddler crab whole body soft tissue were analyzed to assess the fate and transport of pollutants from the environment and its transition into flora-fauna via trophic transfer. Geo-accumulation factor values suggest the bay has experienced limited to no pollution when combining the concentrations of potentially toxic elements extracted from the F1Tess and F4Tess sediment fractions. These geochemical sedimentary compartments …

Bee Abundance Along A Tropical Montane Elevational Gradient And Implications For Crop Pollination Services, Kristin M. Conrad

Online Theses and Dissertations

Tropical forests are among the biologically richest ecosystems on Earth, but how most organisms in these forests will respond to a warming climate remains uncertain. Insects are expected to be highly responsive to climate change due to their short life cycles that are strongly influenced by temperature. Plants depend on pollinators to set seed and reproduce, and many animal populations rely on the resources provided by flowering plants. There is an urgent need to document elevational distributions and thermal specialization for tropical bee species to understand how these important pollinators may respond to warming temperatures. My four-year study (2016-2019) aims …

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- January 2020, Natalie Umphlett, Rezaul Mamood, Paul Flanagan, Logan Winters, Kierstin Blomberg, Emilee Lachenmeier, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Staff spotlight...........................1

Year in review............................2

Updates on engagement and tools.....................................3

Observer awards......................3

Overview of regional climate conditions..................................4

AMS annual meeting.............5

Recent and upcoming travel and activities.............................6

Uptake, Metabolism, And Elimination Of Fungicides From Coated Wheat Seeds In Japanese Quail (Coturnix Japonica), Michael S. Gross, Thomas G. Bean, Michelle L. Hladik, Barnett A. Rattner, Kathryn M. Kuivila

United States Geological Survey: Staff Publications

Pesticides coated to the seed surface potentially pose an ecological risk to granivorous birds that consume incompletely buried or spilled seeds. To assess the toxicokinetics of seeds treated with current-use fungicides, Japanese quail ( Coturnix japonica) were orally dosed with commercially coated wheat seeds. Quail were exposed to metalaxyl, tebuconazole, and fludioxonil at either a low dose (0.0655, 0.0308, and 0.0328 mg/kg of body weight, respectively) or a high dose (0.196, 0.0925, and 0.0985 mg/kg of body weight, respectively). Fungicides were rapidly absorbed and distributed to tissues. Tebuconazole was metabolized into tert-butylhydroxy-tebuconazole. All compounds were eliminated to below detection limits …

Dropsonde Observations Of The Ageostrophy Within The Pre-Cold-Frontal Low-Level Jet Associated With Atmospheric Rivers, Rueben Demirdgian, Joel R. Norris, Andrew Martin, F. Martin Ralph

Geography Faculty Publications and Presentations

The pre-cold-frontal low-level jet (LLJ) is an important contributor for water vapor transport within atmospheric rivers, though its dynamics are not completely understood. The present study investigates the LLJ using dropsonde observations from 24 cross-atmospheric river transects taken during the CalWater-2014, 2015 and the AR-Recon 2016, 2018 field campaigns. It is found that the LLJ, located at ;1-km elevation ahead of the cold front, has an average maximum wind speed of 30ms21 and is strongly supergeostrophic with an average ageostrophic component of 6ms21. The alongfront ageostrophy occurs within the atmospheric layer (750–1250 m) known to strongly control orographic precipitation associated …

Volcanic Impact On Stratospheric Chlorine Chemistry And Perchlorate Formation: Evidence From Ice Cores, Joshua Andrew Kennedy

Electronic Theses and Dissertations

Perchlorate, suspected to be chemically formed in both the troposphere and stratosphere, has been recently measured in Arctic snow and ice cores. These comprise both discontinuous snow and ice cores from the Canadian Arctic and a continuous record of perchlorate was compiled from an analysis of Greenland ice cores. While the background perchlorate concentration typically is very low, a few spikes in concentration coinciding with deposition of volcanic sulfate were observed in the Greenland record, suggesting that perchlorate levels in the atmosphere may be impacted by volcanic eruptions. As of yet, no work has been done to investigate the connection …

An Annual Time Series Of Weekly Size-Resolved Aerosol Properties In The Megacity Of Metro Manila, Philippines, Connor Stahl, Melliza Templonuevo Cruz, Paola Angela Bañaga, Grace Betito, Rachel A. Braun, Mojtaba Azadi Aghdam, Maria Obiminda L. Cambaliza, Genevieve Rose Lorenzo, Alexander B. Macdonald, Preciosa Corazon Pabroa, John Robin Yee, James Bernard Simpas, Armin Sorooshian

Physics Faculty Publications

Size-resolved aerosol samples were collected in Metro Manila between July 2018 and October 2019. Two Micro-Orifice Uniform Deposit Impactors (MOUDI) were deployed at Manila Observatory in Quezon City, Metro Manila with samples collected on a weekly basis for water-soluble speciation and mass quantification. Additional sets were collected for gravimetric and black carbon analysis, including during special events such as holidays. The unique aspect of the presented data is a year-long record with weekly frequency of size-resolved aerosol composition in a highly populated megacity where there is a lack of measurements. The data are suitable for research to understand the sources, …

Projecting Regions Of North Atlantic Right Whale, Eubalaena Glacialis, Habitat Suitability In The Gulf Of Maine In 2050, Camille Ross

Honors Theses

North Atlantic right whales (Eubalaena glacialis) are endangered. Understanding the role environmental conditions play in habitat suitability is key to determining the regions in need of protection for conservation of the species, particularly as climate change shifts suitable habitat. This thesis uses three species distribution modeling algorithms, together with historical data on whale abundance(1993 to 2009) and environmental covariates to build monthly ensemble models of past E. glacialis habitat suitability in the Gulf of Maine. Then, the models are projected onto the year 2050 for a range of climate scenarios. Specifically, the distribution of the species was modeled …

Abiotic Formation Of Dissolved Organic Sulfur In Anoxic Sediments Of Santa Barbara Basin, Hussain A. Abdulla, David J. Burdige, Tomoko Komada

OES Faculty Publications

Sulfurization has been found to enhance organic matter preservation and petroleum formation in marine sediments. However, we do not yet have a comprehensive understanding of sulfurization mechanisms. In this study, we investigated several possible mechanisms of dissolved organic sulfur (DOS) formation in the top 4.5 m of anoxic sediments of Santa Barbara Basin (SBB), California Borderland. Using Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR-MS), we identified chemical formulas of potential dissolved organic matter (DOM) precursors to these DOS compounds. We also examined how the formulas of abiotically formed DOS changed as a function of depth across a major redox …

Deep Equatorial Pacific Ocean Oxygenation And Atmospheric Co2 Over The Last Ice Age, Franco Marcantonio, Ryan Hostak, Jennifer E. Hertzberg, Matthew W. Schmidt

OES Faculty Publications

Ventilation of carbon stored in the deep ocean is thought to play an important role in atmospheric CO₂ increases associated with Pleistocene deglaciations. The presence of this respired carbon has been recorded by an array of paleoceanographic proxies from various locations across the global ocean. Here we present a new sediment core from the Eastern Equatorial Pacific (EEP) Ocean spanning the last 180,000 years and reconstruct high-resolution 230Th-derived fluxes of 232Th and excess barium, along with redox-sensitive uranium concentrations to examine past variations in dust delivery, export productivity, and bottom-water oxygenation, respectively. Our bottom-water oxygenation record is compared to …

Metabolic Profiling Reveals Biochemical Pathways Responsible For Eelgrass Response To Elevated Co2 And Temperature, Carmen C. Zayas-Santiago, Albert Rivas-Ubach, Li-Jung Kuo, Nicholas D. Ward, Richard C. Zimmerman

OES Faculty Publications

As CO₂ levels in Earth’s atmosphere and oceans steadily rise, varying organismal responses may produce ecological losers and winners. Increased ocean CO₂ can enhance seagrass productivity and thermal tolerance, providing some compensation for climate warming. However, the metabolic shifts driving the positive response to elevated CO₂ by these important ecosystem engineers remain unknown. We analyzed whole-plant performance and metabolic profiles of two geographically distinct eelgrass (Zostera marina L.) populations in response to CO₂ enrichment. In addition to enhancing overall plant size, growth and survival, CO₂ enrichment increased the abundance of Calvin Cycle and …

An Oceanographic Perspective On Early Human Migrations To The Americas, Thomas C. Royer, Bruce Finney

OES Faculty Publications

Early migrants to the Americas were likely seaworthy. Many archaeologists now agree that the first humans who traveled to the Americas more than 15,000 years before present (yr BP) used a coastal North Pacific route. Their initial migration was from northeastern Asia to Beringia where they settled for thousands to more than ten thousand years. Oceanographic conditions during the Last Glacial Maximum (18,000-24,000 yr BP) would have enhanced their boat journeys along the route from Beringia to the Pacific Northwest because the influx of freshwater that drives the opposing Alaska Coastal Current was small, global sea level was at least …

Towards Sustained Monitoring Of Subsidence At The Coast Using Insar And Gps: An Application In Hampton Roads, Virginia, Brett Buzzanga, David P.S. Bekaert, Ben D. Hamlington, Simran S. Sangha

OES Faculty Publications

Hampton Roads is among the regions along the U.S. Atlantic Coast experiencing high rates of relative sea level rise. Partly to mitigate subsidence from aquifer compaction, Hampton Roads is injecting treated wastewater into the underlying aquifer. However, the GPS (Global Positioning System) station spacing (∼30 km) is too coarse to capture the spatial variability of subsidence and potential uplift from the injection. We present a cost‐effective workflow for generating an InSAR (interferometric synthetic aperture radar) and GPS combined displacement product. We leverage a live, open‐access archive of InSAR products generated from Sentinel‐1 data. We find an overall subsidence rate of …

Quantifying Seagrass Distribution In Coastal Water With Deep Learning Models, Daniel Perez, Kazi Islam, Victoria Hill, Richard Zimmerman, Blake Schaeffer, Yuzhong Shen, Jiang Li

OES Faculty Publications

Coastal ecosystems are critically affected by seagrass, both economically and ecologically. However, reliable seagrass distribution information is lacking in nearly all parts of the world because of the excessive costs associated with its assessment. In this paper, we develop two deep learning models for automatic seagrass distribution quantification based on 8-band satellite imagery. Specifically, we implemented a deep capsule network (DCN) and a deep convolutional neural network (CNN) to assess seagrass distribution through regression. The DCN model first determines whether seagrass is presented in the image through classification. Second, if seagrass is presented in the image, it quantifies the seagrass …

Bacterial Biofilms Colonizing Plastics In Estuarine Waters, With An Emphasis On Vibrio Spp. And Their Antibacterial Resistance, Amanda L. Laverty, Sebastian Primke, Claudia Lorenz, Gunnar Gerdtz, Fred Dobbs

OES Faculty Publications

Since plastics degrade very slowly, they remain in the environment on much longer timescales than most natural organic substrates and provide a novel habitat for colonization by bacterial communities. The spectrum of relationships between plastics and bacteria, however, is little understood. The first objective of this study was to examine plastics as substrates for communities of Bacteria in estuarine surface waters. We used next-generation sequencing of the 16S rRNA gene to characterize communities from plastics collected in the field, and over the course of two colonization experiments, from biofilms that developed on plastic (low-density polyethylene, high-density polyethylene, polypropylene, polycarbonate, polystyrene) …

Modelling Silicate - Nitrate - Ammonium Co-Limitation Of Algal Growth And The Importance Of Bacterial Remineralisation Based On An Experimental Arctic Coastal Spring Bloom Culture Study, Tobias R. Vonnahme, Martial Leroy, Silke Thoms, Dick Van Oevelen, H. Rodger Harvey, Svein Kristiansen, Rolf Gradinger, Christoph Voelker

OES Faculty Publications

Arctic coastal ecosystems are rapidly changing due to climate warming, which makes modelling their productivity crucially important to better understand future changes. System primary production in these systems is highest during the pronounced spring bloom, typically dominated by diatoms. Eventually the spring blooms terminate due to silicon or nitrogen limitation. Bacteria can play an important role for extending bloom duration and total CO2 fixation through ammonium regeneration. Current ecosystem models often simplify the effects of nutrient co-limitations on algal physiology and cellular ratios and neglect bacterial driven regeneration, leading to an underestimation of primary production. Detailed biochemistry- and cell-based models …

Microplastic Fragment And Fiber Contamination Of Beach Sediments From Selected Sites In Virginia And North Carolina, Usa, Gabrielle Z. Dodson, A. Katrina Shotorban, Patrick G. Hatcher, Derek Waggoner, Sutapa Ghosal, Nora Noffke

OES Faculty Publications

Microplastic particles (<5 >mm) constitute a growing pollution problem within coastal environments. This study investigated the microplastic presence of estuarine and barrier island beaches in the states of Virginia and North Carolina, USA. Seventeen sediment cores were collected at four study sites and initially tested for microplastic presence by pyrolysis-gas chromatography–mass spectrometry. For the extraction, microplastic particles were first separated from the sediment using a high-density cesium chloride solution (1.88 g/mL). In a second step, an oil extraction collected the remaining microplastic particles of higher densities. Under the light microscope, the extracted microplastic particles were classified based on their morphologies …

Performance Across Worldview-2 And Rapideye For Reproducible Seagrass Mapping, Megan M. Coffer, Blake A. Schaeffer, Richard C. Zimmerman, Victoria Hill, Jiang Li, Kazi A. Islam, Peter J. Whitman

OES Faculty Publications

Satellite remote sensing offers an effective remedy to challenges in ground-based and aerial mapping that have previously impeded quantitative assessments of global seagrass extent. Commercial satellite platforms offer fine spatial resolution, an important consideration in patchy seagrass ecosystems. Currently, no consistent protocol exists for image processing of commercial data, limiting reproducibility and comparison across space and time. Additionally, the radiometric performance of commercial satellite sensors has not been assessed against the dark and variable targets characteristic of coastal waters. This study compared data products derived from two commercial satellites: DigitalGlobe's WorldView-2 and Planet's RapidEye. A single scene from each platform …

Hydrothermal Activity And Seismicity At Teahitia Seamount: Reactivation Of The Society Islands Hotspot?, Christopher R. German, Joseph A. Resing, Guangyu Xu, Isobel A. Yeo, Sharon L. Walker, Colin W. Devey, James W. Moffett, Gregory A. Cutter, Olivier Hyvernaud, Dominique Reymond

OES Faculty Publications

Along mid-ocean ridges, submarine venting has been found at all spreading rates and in every ocean basin. By contrast, intraplate hydrothermal activity has only been reported from five locations, worldwide. Here we extend the time series at one of those sites, Teahitia Seamount, which was first shown to be hydrothermally active in 1983 but had not been revisited since 1999. Previously, submersible investigations had led to the discovery of low-temperature (≤30°C) venting associated with the summit of Teahitia Seamount at ≤1500 m. In December 2013 we returned to the same site at the culmination of the US GEOTRACES Eastern South …

Corrigendum To "Upper Water Structure And Mixed Layer Depth In Tropical Waters: The Seats Station In The Northern South China Sea, Jen-Hua Tai, George T.F. Wong, Xiaoju Pan

OES Faculty Publications

No abstract provided.