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2013

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Articles 451 - 480 of 541

Full-Text Articles in Oceanography and Atmospheric Sciences and Meteorology

Validation Of Stratospheric And Mesospheric Ozone Observed By Smiles From International Space Station, Y. Kasai, H. Sagawa, D. Kreyling, E. Dupuy, P. Baron, J. Mendrok, K Suzuki, T. O. Sato, T. Nishibori, S. Mizobuchi, P. F. Bernath Jan 2013

Validation Of Stratospheric And Mesospheric Ozone Observed By Smiles From International Space Station, Y. Kasai, H. Sagawa, D. Kreyling, E. Dupuy, P. Baron, J. Mendrok, K Suzuki, T. O. Sato, T. Nishibori, S. Mizobuchi, P. F. Bernath

Chemistry & Biochemistry Faculty Publications

We observed ozone O3 in the vertical region between 250 and 0.0005 hPa (~ 12-96 km) using the Superconducting Submillimeter-Wave Limb-Emission Sounder (SMILES) on the Japanese Experiment Module (JEM) of the International Space Station (ISS) between 12 October 2009 and 21 April 2010. The new 4K superconducting heterodyne receiver technology of SMILES allowed us to obtain a one order of magnitude better signal-to-noise ratio for the O3 line observation compared to past spaceborne microwave instruments. The non-sun-synchronous orbit of the ISS allowed us to observe O3 at various local times. We assessed the quality of the vertical …


Oligohaline Wetland Response And Recovery Following Storm-Driven Saltwater Intrusion In Coastal Louisiana, Whitney Marie Kiehn Jan 2013

Oligohaline Wetland Response And Recovery Following Storm-Driven Saltwater Intrusion In Coastal Louisiana, Whitney Marie Kiehn

LSU Doctoral Dissertations

Coastal ecosystems occupy an interface between land and ocean, making them vulnerable to a variety of natural and anthropogenic disturbances. Large, episodic disturbances (mega-disturbances) cause immediate and long-lasting changes to coastal wetland plant communities and soils by changing the environmental conditions in which they exist. Here I examined the impacts of storm-induced saltwater intrusion and post-intrusion conditions on the structure and growth of an oligohaline wetland plant community, and on wetland soil biogeochemistry and conditions during and after saltwater intrusion. In the greenhouse, a six-week saltwater intrusion reduced canopy cover and species richness. Once intrusion stress was alleviated, plant community …


Patterns And Pathways Of Wetland Sedimentation And Landscape Change In Coastal Louisiana, Andrew William Tweel Jan 2013

Patterns And Pathways Of Wetland Sedimentation And Landscape Change In Coastal Louisiana, Andrew William Tweel

LSU Doctoral Dissertations

Coastal Louisiana wetlands exist in a dynamic physical environment and retracted dramatically in the last century. Here I examine the spatial and temporal variability of this landscape with an emphasis on the interactions between anthropogenic landscape modifications and geological processes.

The Mississippi River watershed underwent drastic changes during the past 200 years, beginning with widespread land clearing and, later, large-scale reservoir construction. These modifications caused increases in suspended sediment concentrations, then sharp decreases, and have remained relatively stable since 1960. I show how changes in land area of the Mississippi River birdfoot delta reflect these fluctuations, and that they are …


A Study Of The Temporal And Spatial Distribution Of Ichthyoplankton And Post-Larval Penaeids Recruiting Into A Louisiana Tidal Pass, Matthew John Kupchik Jan 2013

A Study Of The Temporal And Spatial Distribution Of Ichthyoplankton And Post-Larval Penaeids Recruiting Into A Louisiana Tidal Pass, Matthew John Kupchik

LSU Doctoral Dissertations

This dissertation attempts to better understand astronomical, meteorological, and oceanographic forcing of offshore-spawned, estuarine-dependent species from continental shelf to estuarine waters through tidal passes. The vertical distribution of zoo-/ichthyoplankton within the inner continental shelf from the Louisiana Offshore Oil Platform monitoring project (1978-1995) provided an important offshore end member for the estuarine recruitment study, and is potentially useful in predicting vulnerabilities to past and future oil spills. The role that atmospheric cold front passages may have on densities and movement of zoo-/ichthyoplankton recruiting through the Bayou Tartellan tidal pass, Louisiana, were analyzed using a Generalized Additive Model. The pre-frontal phase, …


Seasonal Dynamics Of Mesodinium Rubrum In Chesapeake Bay, Matthew D. Johnson, Doane K. Stoecker, Harold G. Marshall Jan 2013

Seasonal Dynamics Of Mesodinium Rubrum In Chesapeake Bay, Matthew D. Johnson, Doane K. Stoecker, Harold G. Marshall

Biological Sciences Faculty Publications

The photosynthetic ciliate Mesodinium rubrum is a common member of coastal phytoplankton communities that is well adapted to low-light, turbid ecosystems. It supports the growth of, or competes with, harmful dinoflagellate species for cryptophyte prey, as well as being a trophic link to copepods and larval fish. We have compiled data from various sources (n = 1063), on the abundance and distribution of M. rubrum in Chesapeake Bay and its tributaries. Because M. rubrum relies on obtaining organelles from cryptophyte algae to maintain rapid growth, we also enumerated cryptophyte algae in the portion of these samples that we collected …


Phytoplankton In Virginia Lakes And Reservoirs, Harold G. Marshall Jan 2013

Phytoplankton In Virginia Lakes And Reservoirs, Harold G. Marshall

Biological Sciences Faculty Publications

This study involves a phytoplankton summer/autumn survey in 46 Virginia lakes and reservoirs during 2010-2012. A total of 307 taxa were identified which included several filamentous and colonial cyanabacteria in bloom concentrations. With the exception of one natural lake, the other sites sampled represent impoundments created decades ago, with the majority presently classified as meso- or eutrophic. Among the cyanobacteria were 6 known toxin producers (Anabaena circinalis, Anabaena spiroides, Aphanizomenon flos-aquae, Cylindrospermopsis raciborskii, Limnothrix redekei, and Microcystis aeruginosa). The study characterizes phytoplankton populations in these aging freshwater habitats taken from a large number …


The Relation Between Atmospheric Humidity And Temperature Trends For Stratospheric Water, S. Fueglistaler, Y. S. Liu, T. J. Flannaghan, P. H. Haynes, D. P. Dee, W. J. Read, E. E. Remsberg, L. W. Thomason, D. F. Hurst, J. R. Lanzante, P. F. Bernath Jan 2013

The Relation Between Atmospheric Humidity And Temperature Trends For Stratospheric Water, S. Fueglistaler, Y. S. Liu, T. J. Flannaghan, P. H. Haynes, D. P. Dee, W. J. Read, E. E. Remsberg, L. W. Thomason, D. F. Hurst, J. R. Lanzante, P. F. Bernath

Chemistry & Biochemistry Faculty Publications

We analyze the relation between atmospheric temperature and water vapor-a fundamental component of the global climate system-for stratospheric water vapor (SWV). We compare measurements of SWV (and methane where available) over the period 1980-2011 from NOAA balloon-borne frostpoint hygrometer (NOAA-FPH), SAGE II, Halogen Occultation Experiment (HALOE), Microwave Limb Sounder (MLS)/Aura, and Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) to model predictions based on troposphere-to-stratosphere transport from ERA-Interim, and temperatures from ERA-Interim, Modern Era Retrospective- Analysis (MERRA), Climate Forecast System Reanalysis (CFSR), Radiosonde Atmospheric Temperature Products for Assessing Climate (RATPAC), HadAT2, and RICHv1.5. All model predictions are dry biased. The interannual …


Hydrocarbons In The Upper Troposphere And Lower Stratosphere Observed From Ace-Fts And Comparisons With Waccm, Mijeong Park, William J. Randel, Douglas E. Kinnison, Louisa K. Emmons, Peter F. Bernath, Kaley A. Walker, Chris D. Boone, Nathaniel J. Livesey Jan 2013

Hydrocarbons In The Upper Troposphere And Lower Stratosphere Observed From Ace-Fts And Comparisons With Waccm, Mijeong Park, William J. Randel, Douglas E. Kinnison, Louisa K. Emmons, Peter F. Bernath, Kaley A. Walker, Chris D. Boone, Nathaniel J. Livesey

Chemistry & Biochemistry Faculty Publications

Satellite measurements from the Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) are used to examine the global, seasonal variations of several hydrocarbons, including carbon monoxide (CO), ethane (C2H6), acetylene (C2H2), and hydrogen cyanide (HCN). We focus on quantifying large-scale seasonal behavior from the middle troposphere to the stratosphere, particularly in the tropics, and furthermore make detailed comparisons with the Whole Atmosphere Community Climate Model (WACCM) chemistry climate model (incorporating tropospheric photochemistry, time-varying hydrocarbon emissions, and meteorological fields nudged from reanalysis). Comparisons with Microwave Limb Sounder (MLS) measurements of CO are also included …


Pronounced Genetic Structure In A Highly Mobile Coral Reef Fish, Caesio Cuning, In The Coral Triangle, Amanda S. Ackiss, Shinta Pardede, Eric D. Crandall, Ma Carmen A. Ablan-Lagman, Ambariyanto, November Romena, Paul H. Barber, Kent E. Carpenter Jan 2013

Pronounced Genetic Structure In A Highly Mobile Coral Reef Fish, Caesio Cuning, In The Coral Triangle, Amanda S. Ackiss, Shinta Pardede, Eric D. Crandall, Ma Carmen A. Ablan-Lagman, Ambariyanto, November Romena, Paul H. Barber, Kent E. Carpenter

Biological Sciences Faculty Publications

The redbelly yellowtail fusilier Caesio cuning has a tropical Indo-West Pacific range that straddles the Coral Triangle, a region of dynamic geological history and the highest marine biodiversity on the planet. Previous genetic studies in the Coral Triangle indicate the presence of multiple limits to connectivity. However, these studies have focused almost exclusively on benthic, reef-dwelling species. Schooling, reef-associated fusiliers (Perciformes: Caesionidae) account for a sizable portion of the annual reef catch in the Coral Triangle, yet to date, there have been no indepth studies on the population structure of fusiliers or other mid-water, reef-associated planktivores across this region. We …


Water Vapor And The Equatorial Mesospheric Semi-Annual Oscillation (Msao), R. L. Gattinger, E. Kyröla, C. D. Boone, W. F. J. Evans, K. A. Walker, I. C. Mcdade, P. F. Bernath, E. J. Llewellyn Jan 2013

Water Vapor And The Equatorial Mesospheric Semi-Annual Oscillation (Msao), R. L. Gattinger, E. Kyröla, C. D. Boone, W. F. J. Evans, K. A. Walker, I. C. Mcdade, P. F. Bernath, E. J. Llewellyn

Chemistry & Biochemistry Faculty Publications

Observations of the mesospheric semi-annual oscillation (MSAO) in the equatorial region have been reported dating back several decades. Seasonal variations in both species densities and airglow emissions are well documented. The extensive observations available offer an excellent case study for comparison with model simulations. The broad range of measurements is summarised with emphasis on the 80 to 100 km region. Photochemical model simulations are described for near-equinox and near solstice conditions, the two lines with notable differences in the observed MSAO parameters. Diurnal tides are included in order to facilitate comparisons of observations made at different local times. The roles …


A Preliminary Examination Of An In Situ Dual Dye Approach To Measuring Light Fluxes In Lotic Systems, Elizabeth C. Minor, Elizabeth James, Jay A. Austin, Veronica Nelson, Ryan Lusk, Kenneth Mopper Jan 2013

A Preliminary Examination Of An In Situ Dual Dye Approach To Measuring Light Fluxes In Lotic Systems, Elizabeth C. Minor, Elizabeth James, Jay A. Austin, Veronica Nelson, Ryan Lusk, Kenneth Mopper

Chemistry & Biochemistry Faculty Publications

Light is a critical parameter in aquatic ecosystems, affecting primary production and in situ photochemistry. However, measuring light exposure for suspended particles or dissolved components in a dynamic water column can be challenging with existing Eulerian approaches. Here, we assess the simultaneous deployment of two dyes differing in photolability (rhodamine WT and fluorescein) as a Lagrangian measure of sunlight exposure in a lotic system. Fluorescein is sensitive to light exposure; rhodamine WT is relatively photostable. We examined dye fluorescence at various pH, salinity, and temperature conditions. We also tested dye photolability as a function of pH and wavelength range. In …


Modeling Visibility In The El Paso Del Norte (Pdn) Region, Richard Medina Calderon Jan 2013

Modeling Visibility In The El Paso Del Norte (Pdn) Region, Richard Medina Calderon

Open Access Theses & Dissertations

Poor visibility is a subject of growing public concern throughout the U.S, and an active area of research. Its societal impacts on air quality, aviation transport and traffic are significant. Aerosols play a fundamental role in the attenuation of solar radiation, and also affect visibility. The scattering and extinction coefficients of aerosol particles in the Paso del Norte Region have been calculated using the T- matrix model in conjunction with a laser particle counter. Inter-comparison of the model's results of the scattering and absorption coefficients against the corresponding data from a Photoacustic extinctiometer instrument (which measures in-situ absorption and scattering …


Changes In Net Ecosystem Production Over The Past 40 Years In Arctic Tundra Ponds Near Barrow, Alaska: Application Of Historic And Modern Techniques, Nickole Ann Miller Jan 2013

Changes In Net Ecosystem Production Over The Past 40 Years In Arctic Tundra Ponds Near Barrow, Alaska: Application Of Historic And Modern Techniques, Nickole Ann Miller

Open Access Theses & Dissertations

Arctic environments have gained interest recently due to their sensitivity to climate change. As warming has created longer growing seasons, extended ice-free periods as well as permafrost thaw, the production in freshwater ecosystems has the potential to be greatly impacted. It is hypothesized that as climate change and warming occurs, increases in primary production will occur and ponds will become carbon sinks. Net ecosystem production (NEP) was determined using phytoplankton and periphyton samples collected weekly during the growing season (June - August) from arctic tundra ponds near Barrow, Alaska. Enrichment with 14C was used to determine both weekly photosynthetic rates …


Evaluation Of Emission Control Strategies To Reduce Ozone Pollution In The Paso Del Norte Region Using A Photochemical Air Quality Modeling System, Victor Hugo Valenzuela Jan 2013

Evaluation Of Emission Control Strategies To Reduce Ozone Pollution In The Paso Del Norte Region Using A Photochemical Air Quality Modeling System, Victor Hugo Valenzuela

Open Access Theses & Dissertations

Air pollution emissions control strategies to reduce ozone precursor pollutants are analyzed by applying a photochemical modeling system. Simulations of air quality conditions during an ozone episode which occurred in June, 2006 are undertaken by increasing or reducing area source emissions in Ciudad Juárez, Chihuahua, Mexico.

Two air pollutants are primary drivers in the formation of tropospheric ozone. Oxides of nitrogen (NOx) and volatile organic compounds (VOC) undergo multiple chemical reactions under favorable meteorological conditions to form ozone, which is a secondary pollutant that irritates respiratory systems in sensitive individuals especially the elderly and young children.

The U.S. Environmental Protection …


Implementation And Model To Model Intercomparison Of 12 Heat Stress Metrics, Jonathan Robert Buzan Jan 2013

Implementation And Model To Model Intercomparison Of 12 Heat Stress Metrics, Jonathan Robert Buzan

Open Access Theses

Earth system models simulate the dynamics of the most complex systems on our planet with some success. Despite the overwhelming sophistication of these models, which include dynamical interactions of ocean, atmosphere, vegetation, ice, and land-surface properties, they fail to include the most important element. People. Humans are also a complex physical-biological system and coupling of human physiology within an Earth Systems Modeling framework is challenging. This thesis presents results that tackle one particular component of human physiological climate interaction--a representation of heat stress on human physiology. Twelve different metrics were implemented and analyzed. These metrics represent a variety of philosophical …


The Influence Of The Tibetan Plateau Elevation On The Global And Asian Monsoons, Rene Paul Acosta Jan 2013

The Influence Of The Tibetan Plateau Elevation On The Global And Asian Monsoons, Rene Paul Acosta

Open Access Theses

It has been long hypothesized that large-scale topographic changes, such as the surface uplift of the Tibetan Plateau, impacts the development of the South Asian and East Asian monsoons and influences other monsoon regions. However, recent modeling has shown that spatial distribution of the global monsoon, which includes the South Asian and East Asian monsoons is largely unaffected by the elevation of the plateau. In this study, we present results from a series of modern day simulations using CESM1.0 in a mixed-layer (slab ocean) configuration. The Tibetan Plateau height is varied from double that of the modern maximum plateau elevation …


Chemical Consequences Of Chicxulub Impact Ejecta Reentry, Devon Donald Parkos Jan 2013

Chemical Consequences Of Chicxulub Impact Ejecta Reentry, Devon Donald Parkos

Open Access Theses

The Chicxulub impact 66.0 million years ago initiated the second biggest extinction in the Phanerozoic Eon. The global reentry of material ejected by the impact generated a strong pulse of thermal radiation that wiped out much of the terrestrial biota. The cause of the marine extinction, however, has remained elusive. This report shows that reentering ejecta produces enough NOx to acidify the upper ocean and cause a massive marine extinction. Using non-equilibrium chemically reacting flow simulations coupled with atmospheric transport modeling, it is determined that enough NOx reached the stratosphere and precipitated to overpower the carbonate buffer and acidify the …


Annual Patterns Of Atmospheric Pollutions And Episodes Over Cairo Egypt, Y. Aboel Fetouh, Hesham El-Askary, Mohamed El Raey, Mohamed Allali, W. A. Sprigg, Menas Kafatos Jan 2013

Annual Patterns Of Atmospheric Pollutions And Episodes Over Cairo Egypt, Y. Aboel Fetouh, Hesham El-Askary, Mohamed El Raey, Mohamed Allali, W. A. Sprigg, Menas Kafatos

Mathematics, Physics, and Computer Science Faculty Articles and Research

The Nile Delta major cities, particularly Cairo, experienced stagnant air pollution episodes, known as Black Cloud, every year over the past decade during autumn. Low-elevated thermal inversion layers play a crucial role in intensifying pollution impacts. Carbon monoxide, ozone, atmospheric temperature, water vapor, and methane measurements from the tropospheric emission spectrometer (TES) on board the Aura have been used to assess the dominant component below the inversion layer. In this study, time series analysis, autocorrelations, and cross correlations are performed to gain a better understanding of the connections between those parameters and their local effect. Satellite-based data were obtained for …


Photographic Survey Of Benthos Provides Insights Into The Antarctic Fish Fauna From The Marguerite Bay Slope And The Amundsen Sea, Joseph T. Eastman, Margaret O. Amsler, Richard D. Aronson, Sven Thatje, James Mcclintock, Stephanie C. Vos, Jeffrey W. Kaeli, Hanumant Singh, Mario La Mesa Jan 2013

Photographic Survey Of Benthos Provides Insights Into The Antarctic Fish Fauna From The Marguerite Bay Slope And The Amundsen Sea, Joseph T. Eastman, Margaret O. Amsler, Richard D. Aronson, Sven Thatje, James Mcclintock, Stephanie C. Vos, Jeffrey W. Kaeli, Hanumant Singh, Mario La Mesa

Ocean Engineering and Marine Sciences Faculty Publications

We reviewed photographic images of fishes from depths of 381–2282m in Marguerite Bay and 405–2007m in the Amundsen Sea. Marguerite Bay fishes were 33% notothenioids and 67% non-notothenioids. Channichthyids (47%) and nototheniids (44%) were the most abundant notothenioids. The deep-living channichthyid Chionobathyscus dewitti (74%) and the nototheniid genus Trematomus (66%) were the most abundant taxa within these two families. The most abundant non-notothenioids were the macrourid Macrourus whitsoni (72%) and zoarcids (18%). Amundsen Sea fishes were 87% notothenioids and 13% non-notothenioids, the latter exclusively Macrourus whitsoni. Bathydraconids (38%) and artedidraconids (30%) were the most abundant notothenioids. We observed that Macrourus …


Relative Roles Of Circumnavigating Waves And Extratropics On The Mjo And Its Relationship With The Mean State, Pallav Ray, Tim Li Jan 2013

Relative Roles Of Circumnavigating Waves And Extratropics On The Mjo And Its Relationship With The Mean State, Pallav Ray, Tim Li

Ocean Engineering and Marine Sciences Faculty Publications

Aset of atmospheric general circulation model (GCM) experiments is designed to explore the relative roles of the circumnavigating waves and the extratropics on the Madden–Julian oscillation (MJO). In a ‘‘control’’ simulation, the model is forced by the climatological monthly sea surface temperature for 20 yr. In the first sensitivity experiment, model prognostic variables are relaxed in the tropical Atlantic region (208S–208N, 808W–08) toward the ‘‘controlled’’ climatological annual cycle to suppress the influences from the circumnavigating waves. In the second sensitivity experiment, model prognostic variables are relaxed in the 208–308 latitude zones toward the controlled climatological annual cycle to suppress the …


Reviews Of Science For Science Librarians: Drought In The Agricultural And Geosciences Literature, Leslie M. Delserone, Adonna Fleming Jan 2013

Reviews Of Science For Science Librarians: Drought In The Agricultural And Geosciences Literature, Leslie M. Delserone, Adonna Fleming

University of Nebraska-Lincoln Libraries: Faculty Publications

Drought is a hot topic, given the climatic events of summer 2012 in the United States. This article provides a fundamental understanding of drought—its definitions, classifications, ratings, and impact on agriculture. Also included are introductions to drought-related research areas in the geosciences—specifically geology, hydrology, and atmospheric sciences—as well as pointers to reliable sources of information about drought from the agricultural and geosciences literature.


The Floodplain Food Web Mosaic: A Study Of Its Importance To Salmon And Steelhead With Implications For Their Recovery, J. Ryan Bellmore, Colden V. Baxter, Kyle Martens, Patrick J. Connolly Jan 2013

The Floodplain Food Web Mosaic: A Study Of Its Importance To Salmon And Steelhead With Implications For Their Recovery, J. Ryan Bellmore, Colden V. Baxter, Kyle Martens, Patrick J. Connolly

United States Geological Survey: Staff Publications

Although numerous studies have attempted to place species of interest within the context of food webs, such efforts have generally occurred at small scales or disregard potentially important spatial heterogeneity. If food web approaches are to be employed to manage species, studies are needed that evaluate the multiple habitats and associated webs of interactions in which these species participate. Here, we quantify the food webs that sustain rearing salmon and steelhead within a floodplain landscape of the Methow River, Washington, USA, a location where restoration has been proposed to restore side channels in an attempt to recover anadromous fishes. We …


Predictive Models For Escherichia Coli Concentrations At Inland Lake Beaches And Relationship Of Model Variables To Pathogen Detection, Donna S. Francy, Erin A. Stelzer, Joseph W. Duris, Amie M. G. Brady, John H. Harrison, Heather E. Johnson, Michael W. Ware Jan 2013

Predictive Models For Escherichia Coli Concentrations At Inland Lake Beaches And Relationship Of Model Variables To Pathogen Detection, Donna S. Francy, Erin A. Stelzer, Joseph W. Duris, Amie M. G. Brady, John H. Harrison, Heather E. Johnson, Michael W. Ware

United States Geological Survey: Staff Publications

Predictive models, based on environmental and water quality variables, have been used to improve the timeliness and accuracy of recreational water quality assessments, but their effectiveness has not been studied in inland waters. Sampling at eight inland recreational lakes in Ohio was done in order to investigate using predictive models for Escherichia coli and to understand the links between E. coli concentrations, predictive variables, and pathogens. Based upon results from 21 beach sites, models were developed for 13 sites, and the most predictive variables were rainfall, wind direction and speed, turbidity, and water temperature. Models were not developed at sites …


The Malthusian–Darwinian Dynamic And The Trajectory Of Civilization, Jeffrey C. Nekola, Craig D. Allen, James H. Brown, Joseph R. Burger, Ana D. Davidson, Trevor S. Fristoe, Marcus J. Hamilton, Sean T. Hammond, Astrid Kodric-Brown, Norman Mercado-Silva, Jordan G. Okie Jan 2013

The Malthusian–Darwinian Dynamic And The Trajectory Of Civilization, Jeffrey C. Nekola, Craig D. Allen, James H. Brown, Joseph R. Burger, Ana D. Davidson, Trevor S. Fristoe, Marcus J. Hamilton, Sean T. Hammond, Astrid Kodric-Brown, Norman Mercado-Silva, Jordan G. Okie

United States Geological Survey: Staff Publications

Two interacting forces influence all populations: the Malthusian dynamic of exponential growth until resource limits are reached, and the Darwinian dynamic of innovation and adaptation to circumvent these limits through biological and/or cultural evolution. The specific manifestations of these forces in modern human society provide an important context for determining how humans can establish a sustainable relationship with the finite Earth.


Reproductive Health Of Yellow Perch Perca Flavescens In Selected Tributaries Of The Chesapeake Bay, Vicki S. Blazer, Alfred E. Pinkney, Jill A. Jenkins, Luke R. Iwanowicz, Steven Minkkinen, Rassa O. Draugelis-Dale, James H. Uphoff Jan 2013

Reproductive Health Of Yellow Perch Perca Flavescens In Selected Tributaries Of The Chesapeake Bay, Vicki S. Blazer, Alfred E. Pinkney, Jill A. Jenkins, Luke R. Iwanowicz, Steven Minkkinen, Rassa O. Draugelis-Dale, James H. Uphoff

United States Geological Survey: Staff Publications

Reduced recruitment of yellow perch has been noted for a number of years in certain urbanized watersheds (South and Severn Rivers) of the Chesapeake Bay. Other rapidly developing watersheds such as Mattawoman Creek are more recently showing evidence of reduced recruitment of anadromous fishes. In this study, we used a battery of biomarkers to better document the reproductive health of adult yellow perch collected during spring spawning in 2007–2009. Perch were collected in the South and Severn Rivers, Mattawoman Creek and the less developed Choptank and Allen's Fresh watersheds for comparison. Gonadosomatic indices, plasma reproductive hormone concentrations, plasma vitellogenin concentrations …


Performance Of Human Fecal Anaerobe-Associated Pcr-Based Assays In A Multi-Laboratory Method Evaluation Study, Blythe A. Layton, Yiping Cao, Darcy L. Ebentier, Kaitlyn Hanley, Elisenda Balleste, Joao Brandao, Muruleedhara Byappanahalli, Reagan Converse, Andreas H. Farnleitner, Jennifer Gentry-Shields, Maribeth L. Gidley, Michele Gourmelon, Chang Soo Lee, Jiyoung Lee, Solen Lozach, Tania Madi, Wim G. Meijer, Rachel Noble, Lindsay Peed, Georg H. Reischer, Raquel Rodrigues, Joan B. Rose, Alexander Schriewer, Chris Sinigalliano, Sangeetha Srinivasan, Jill Stewart, Laurie C. Van De Werfhorst, Dan Wang, Richard Whitman, Stefan Wuertz, Jenny Jay, Patricia A. Holden, Alexandria B. Boehm, Orin Shanks, John F. Griffith Jan 2013

Performance Of Human Fecal Anaerobe-Associated Pcr-Based Assays In A Multi-Laboratory Method Evaluation Study, Blythe A. Layton, Yiping Cao, Darcy L. Ebentier, Kaitlyn Hanley, Elisenda Balleste, Joao Brandao, Muruleedhara Byappanahalli, Reagan Converse, Andreas H. Farnleitner, Jennifer Gentry-Shields, Maribeth L. Gidley, Michele Gourmelon, Chang Soo Lee, Jiyoung Lee, Solen Lozach, Tania Madi, Wim G. Meijer, Rachel Noble, Lindsay Peed, Georg H. Reischer, Raquel Rodrigues, Joan B. Rose, Alexander Schriewer, Chris Sinigalliano, Sangeetha Srinivasan, Jill Stewart, Laurie C. Van De Werfhorst, Dan Wang, Richard Whitman, Stefan Wuertz, Jenny Jay, Patricia A. Holden, Alexandria B. Boehm, Orin Shanks, John F. Griffith

United States Geological Survey: Staff Publications

A number of PCR-based methods for detecting human fecal material in environmental waters have been developed over the past decade, but these methods have rarely received independent comparative testing in large multi-laboratory studies. Here, we evaluated ten of these methods (BacH, BacHum-UCD, Bacteroides thetaiotaomicron (BtH), BsteriF1, gyrB, HF183 endpoint, HF183 SYBR, HF183 Taqman®, HumM2, and Methanobrevibacter smithii nifH (Mnif)) using 64 blind samples prepared in one laboratory. The blind samples contained either one or two fecal sources from human, wastewater or non-human sources. The assay results were assessed for presence/absence of the human markers and also quantitatively while …


Human-Caused Mortality Influences Spatial Population Dynamics: Pumas In Landscapes With Varying Mortality Risks, Jesse R. Newby, L. Scott Mills, Toni K. Ruth, Daniel H. Pletscher, Michael S. Mitchell, Howard B. Quigley, Kerry M. Murphy, Rich Desimone Jan 2013

Human-Caused Mortality Influences Spatial Population Dynamics: Pumas In Landscapes With Varying Mortality Risks, Jesse R. Newby, L. Scott Mills, Toni K. Ruth, Daniel H. Pletscher, Michael S. Mitchell, Howard B. Quigley, Kerry M. Murphy, Rich Desimone

United States Geological Survey: Staff Publications

An understanding of how stressors affect dispersal attributes and the contribution of local populations to multi-population dynamics are of immediate value to basic and applied ecology. Puma (Puma concolor) populations are expected to be influenced by inter-population movements and susceptible to human induced source–sink dynamics. Using long-term datasets we quantified the contribution of two puma populations to operationally define them as sources or sinks. The puma population in the Northern Greater Yellowstone Ecosystem (NGYE) was largely insulated from human-induced mortality by Yellowstone National Park. Pumas in the western Montana Garnet Mountain system were exposed to greater human-induced mortality, …


A Causal Examination Of The Effects Of Confounding Factors On Multimetric Indices, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Brian R. Mitchell, Glenn R. Guntenspergen Jan 2013

A Causal Examination Of The Effects Of Confounding Factors On Multimetric Indices, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Brian R. Mitchell, Glenn R. Guntenspergen

United States Geological Survey: Staff Publications

The development of multimetric indices (MMIs) as a means of providing integrative measures of ecosystem condition is becoming widespread. An increasingly recognized problem for the interpretability of MMIs is controlling for the potentially confounding influences of environmental covariates. Most common approaches to handling covariates are based on simple notions of statistical control, leaving the causal implications of covariates and their adjustment unstated. In this paper, we use graphical models to examine some of the potential impacts of environmental covariates on the observed signals between human disturbance and potential response metrics. Using simulations based on various causal networks, we show how …


An Algorithmic And Information-Theoretic Approach To Multimetric Index Construction, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Glenn R. Guntenspergen, Brian R. Mitchell, Kathryn M. Miller, Amanda M. Little Jan 2013

An Algorithmic And Information-Theoretic Approach To Multimetric Index Construction, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Glenn R. Guntenspergen, Brian R. Mitchell, Kathryn M. Miller, Amanda M. Little

United States Geological Survey: Staff Publications

The use of multimetric indices (MMIs), such as the widely used index of biological integrity (IBI), to measure, track, summarize and infer the overall impact of human disturbance on biological communities has been steadily growing in recent years. Initially, MMIs were developed for aquatic communities using preselected biological metrics as indicators of system integrity. As interest in these bioassessment tools has grown, so have the types of biological systems to which they are applied. For many ecosystem types the appropriate biological metrics to use as measures of biological integrity are not known a priori. As a result, a variety of …


Extending Airborne Electromagnetic Surveys For Regional Active Layer And Permafrost Mapping With Remote Sensing And Ancillary Data, Yukon Flats Ecoregion, Central Alaska, Neal J. Pastick, M. Torre Jorgenson, Bruce K. Wylie, Burke J. Minsley, Lei Ji, Michelle A. Walvoord, Bruce D. Smith, Jared D. Abraham, Joshua R. Rose Jan 2013

Extending Airborne Electromagnetic Surveys For Regional Active Layer And Permafrost Mapping With Remote Sensing And Ancillary Data, Yukon Flats Ecoregion, Central Alaska, Neal J. Pastick, M. Torre Jorgenson, Bruce K. Wylie, Burke J. Minsley, Lei Ji, Michelle A. Walvoord, Bruce D. Smith, Jared D. Abraham, Joshua R. Rose

United States Geological Survey: Staff Publications

Machine-learning regression tree models were used to extrapolate airborne electromagnetic resistivity data collected along flight lines in the Yukon Flats Ecoregion, central Alaska, for regional mapping of permafrost. This method of extrapolation (r = 0.86) used subsurface resistivity, Landsat Thematic Mapper (TM) at-sensor reflectance, thermal, TM-derived spectral indices, digital elevation models and other relevant spatial data to estimate near-surface (0–2.6-m depth) resistivity at 30-m resolution. A piecewise regression model (r = 0.82) and a presence/absence decision tree classification (accuracy of 87%) were used to estimate active-layer thickness (ALT) (< 101 cm) and the probability of near-surface (up to 123-cm depth) permafrost occurrence from field data, modelled near-surface (0–2.6m) resistivity, and other relevant remote sensing and map data. At site scale, the predicted ALTs were similar to those previously observed for different vegetation types. At the landscape scale, the predicted ALTs tended to be thinner on higher-elevation loess deposits than on low-lying alluvial and sand sheet deposits of the Yukon Flats. The ALT and permafrost maps provide a baseline for future permafrost monitoring, serve as inputs for modelling hydrological and carbon cycles at local to regional scales, and offer insight into the ALT response to fire and thaw processes. Published 2013. This article is a U.S. Government work and is in the public domain in the USA.