Oceanography and Atmospheric Sciences and Meteorology Commons^™

On The Low-Frequency Current And Temperature Fluctuations Along The Shelf Break In The South Atlantic Bight, Sunny Yu Wu

OES Theses and Dissertations

Current and temperature data collected along the shelf edge in the South Atlantic Bight were analyzed using a spectral analysis technique. The power spectra of both alongshore currents and temperatures (upon removal of seasonal trends) in the mid- to lower water column suggest a significant energy peak at 28 days. The spatial characteristics of the fluctuations around this period band were determined using the frequency domain empirical orthogonal function (EOF) analysis applied to the concurrent current and temperature records. Consistent results were obtained from the upstream side of the Charleston Bump. Around the 28-day period, temperature seems to have little …

Circulation, Winter 1994, Center For Coastal Physical Oceanography, Old Dominion University

CCPO Circulation

Winter 1994 issue of CCPO Circulation featuring article "Hydrographic Observations in the Chesapeake Bay Mouth"

The Dinoflagellate Flora Of The Late Oligocene - Early Miocene Old Church Formation Mid-Atlantic Coastal Plain, Alan P. Hoffmeister

OES Theses and Dissertations

The Old Church Formation contains the only presently known exposed Oligocene sediments in the North American mid-Atlantic Coastal Plain. Some ambiguity concerning the exact age of the Old Church Formation exists because it may include both Oligocene and Miocene sediments. Two outcrops and four cores containing the Old Church Formation were examined for dinoflagellates to determine the composition of the dinoflagellate flora in the Old Church Formation, the age of the Old Church Formation as indicated by this flora, general depositional environment of the Old Church Formation and correlative relationships of the Old Church Formation with other Coastal Plain units. …

A Comparison Of A Validated Otolith Method To Age Weakfish, Cynoscion Regalis, With The Traditional Scale Method, Susan K. Lowerre-Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Otoliths, scales, dorsal spines, and pectoral-fin rays were compared to ascertain the best hardpart for determining the age of weakfish, Cynoscion regalis. Each showed concentric marks, which could be interpreted as annuli. Sectioned otoliths, however, consistently showed the clearest marks, had 100% agreement between and within readers, and were validated by the marginal increment method for ages 1-5. This validated method of ageing weakfish was then compared with the traditionally used scale method. The scale method was less precise, as demonstrated by lower percent agreement, and generally assigned younger ages for fish older than age 6 (as determined by …

The Biogeochemistry Of Hydrogen Sulfide: Phytoplankton Production In The Surface Ocean, Russell S. Walsh, Gregory A. Cutter, William M. Dunstan, Joel Radford-Knoery, Jennifer T. Elder

OES Faculty Publications

Hydrogen sulfide can exist in oxic waters in the form of a dissolved gas, dissociated ions, dissolved metal sulfide complexes, and particulate metal sulfides. The sum of the dissolved species is termed total dissolved sulfide (TDS). In addition to the hydrolysis of carbonyl sulfide, it has been speculated that phytoplankton may produce TDS. We present results from preliminary culture studies which demonstrate that phytoplankton produce TDS and particulate acid-volatile sulfide (pAVS). The phylogenetic order of TDS + pAVS production (per unit cell volume) for the oceanic species examined is Synechococcus sp. > Emiliania huxleyi ≈ Pyramimonas obovata > Thalassiosira oceanica. Moreover, …

Biogeochemical Control Of Phosphorus Cycling And Primary Production In Lake Michigan, R. S. Walsh, Gregory A. Cutter, W. M. Dunstan, J. Radford-Knoery, J. T. Elder

OES Faculty Publications

A 3-yr study in Lake Michigan has shown a 27 mmol P m^-2 increase in the mass of total P (TP) in the water during spring when the lake is mixed from surface to sediment. This value is an order of magnitude greater than the annual P input from external sources. TP changed in concert with increases in chlorophyll a and organic N and decreases in nitrate and soluble Si. The concentration of soluble reactive PO_4^-3 (SRP) remained relatively constant throughout the study. We hypothesize that the SRP concentration is maintained by a chemical equilibrium with calcium-phosphate …

Assessment Of Genetic Diversity Of Seagrass Populations Using Dna Fingerprinting: Implications For Population Stability And Management, Randall S. Alberte, Gregory K. Suba, Gabriele Procaccini, Richard C. Zimmerman, Steven R. Fain

OES Faculty Publications

Populations of the temperate seagrass, Zostera marina L. (eelgrass), often exist as discontinuous beds in estuaries, harbors, and bays where they can reproduce sexually or vegetatively through clonal propagation. We examined the genetic structure of three geographically and morphologically distinct populations from central California (Elkhorn Slough, Tomales Bay, and Del Monte Beach), using multilocus restriction fragment length polymorphisms (DNA fingerprints). Within-population genetic similarity (S_w) values for the three eelgrass populations ranged from 0.44 to 0.68. The Tomales Bay population located in an undisturbed, littoral site possessed a within-population genetic similarity (S_w = 0.44) that was significantly lower …

Modeling Daily Production Of Aquatic Macrophytes From Irradiance Measurements: A Comparative Analysis, Richard C. Zimmerman, Alejandro C. Pasini, Randall S. Alberte

OES Faculty Publications

The importance of submerged aquatic macrophytes to coastal ecosystems has generated a need for knowledge of minimum light levels that will support the maintenance and restoration of healthy populations. Our goals were (1) to evaluate the sensitivity to natural, non-sinusoidal fluctuations in irradiance I of analytical integration techniques for calculating daily carbon gain, (2) to evaluate the H_sat (the daily period of I-saturated photosynthesis) model of daily production relative to models based on instantaneous photosynthesis vs irradiance (P vs I) and (3) to provide some guidance for the temporal density of irradiance data required for accurate estimation of …

Contribution Of Zooplankton Lipids To The Flux Of Organic Matter In The Northern Adriatic Sea, Mirjana Najdek, Staša Puškarić, Alexander B. Bochdansky

OES Faculty Publications

Analyses of particulate material collected by sediment traps moored at a location in the northern Adriatic Sea in 1991 revealed the presence of zooplankton fatty acids, even though zooplankton and other 'swimmers' killed by the trap's preservative were carefully removed. Laboratory experiments were conducted to (1) prove the existence of zooplankton lipids within fecal pellets, (2) exclude the possibility of incomplete separation of swimmers and other material as eventual contamination with polyunsaturated fatty acids in fecal pellets, (3) evaluate the importance of zooplankton lipids to mass flux and (4) reveal the mechanisms which lead to excretion of undigested organic matter, …

The Oceanographer's Toolkit: Oceanatlas And Atlast, Larry P. Atkinson

CCPO Publications

Most of us spend a great deal of time looking at data, visualizing it in our mind, and interpreting it for others. I am sure we all have also often realized how much time we spend on the unproductive part of these tasks. How often have you said, “I could have done this faster by hand!” I looked at two free software packages, OceanAtlas (OA) and Atlast, with success, but I wondered what longtime users thought of them. OceanAtlas is for the Mac and Atlast for the PC. Both have extensive data visualization capability and both come with large datasets: …

Modeling Oyster Populations. Iv. Rates Of Mortality, Population Crashes, And Management, E. N. Powell, J. M. Klinck, E. E. Hofmann, S. M. Ray

CCPO Publications

A time-dependent energy-flow model was used to examine how mortality affects oyster populations over the latitudinal gradient from Galveston Bay, Texas, to Chesapeake Bay, Virginia. Simulations using different mortality rates showed that mortality is required for market-site oysters to be a component of the population's size-frequency distribution; otherwise a population of stunted individuals results. As mortality extends into the juvenile sizes, the population's size frequency shifts toward the larger sizes. In many cases adults increase despite a decrease in overall population abundance. Simulations, in which the timing of mortality varied, showed that oyster populations are more susceptible to population declines …

Modeling Oyster Populations Ii. Adult Size And Reproductive Effort, E. E. Hofmann, J. M. Klinck, E. N. Powell, S. Boyles, M. Ellis

CCPO Publications

A time-dependent model of energy flow in post-settlement oyster populations is used to examine the factors that influence adult size and reproductive effort in a particular habitat, Galveston Bay, Texas, and in habitats that extend from Laguna Madre, Texas to Chesapeake Bay. The simulated populations show that adult size and reproductive effort are determined by the allocation of net production to somatic or reproductive tissue development and the rate of food acquisition, both of which are temperature dependent. For similar food conditions, increased temperature reduces the allocation of net production to somatic tissue and increases the rate of food acquisition. …

Continuous Assimilation Of Geosat Altimeter Data Into A Three-Dimensional Primitive Equation Gulf Stream Model, Tal Ezer, George L. Mellor

CCPO Publications

A three-dimensional data assimilation scheme is described and tested, using the Geosat altimeter data and a high-resolution, primitive equation, numerical ocean model of the Gulf Stream region. The assimilation scheme is based on an optimal interpolation approach in which data along satellite tracks are continuously interpolated horizontally and vertically into the model grid and assimilated with the model prognostic fields. Preprocessed correlations between surface elevation anomalies and subsurface temperature and salinity anomalies are used to project surface information into the deep ocean; model and data error estimates are used to optimize the assimilation. Analysis fields derived from the Navy's Optimum …

The Pressure Gradient Conundrum Of Sigma Coordinate Ocean Models, George L. Mellor, Tal Ezer, Lie-Yauw Oey

CCPO Publications

It is shown that the differencing scheme cited here, though conventional, is not hydrostatically inconsistent; the sigma coordinate, pressure gradient error decreases with the square of the vertical and horizontal grid size. Furthermore, it is shown that the pressure gradient error is advectively eliminated after a long time integration. At the other extreme, it is shown that diagnostic calculations of the North Atlantic Ocean using rather coarse resolution, and where the temperature and salinity and the pressure gradient error are held constant, do not exhibit significant differences when compared to a calculation where horizontal pressure gradients are computed on z-level …

Prediction Of The Stochastic Behavior Of Nonlinear Systems By Deterministic Models As A Classical Time-Passage Probabilistic Problem, L. M. Ivanov, A. D. Kirwan Jr., O. V. Melnichenko

CCPO Publications

Assuming that the behaviour of a nonlinear stochastic system can be described by a Markovian diffusion approximation and that the evolution equations can be reduced to a system of ordinary differential equations, a method for the calculation of prediction time is developed. In this approach, the prediction time depends upon the accuracy of prediction, the intensity of turbulence, the accuracy of the initial conditions, the physics contained in the mathematical model, the measurement errors, and the number of prediction variables. A numerical application to zonal channel flow illustrates the theory. Some possible generalizations of the theory are also discussed.

Surface Flow Structure Of The Gulf Stream From Composite Imagery And Satellite-Tracked Drifters, C. P. Mullen, A. D. Kirwan Jr.

CCPO Publications

A unique set of coutemporaneous satellite-tracked drifters and five-day composite Advanced Very High Resolution Radionmeter (AVHRR) satellite imagery of the North Atlantic has been analyzed to examine the surface flow structure of the Gulf Stream. The study region was divided into two sections, greater than 37 degrees N and less than 37 degrees N, in order to answer the question of geographic variability. Fractal and spectral analyses methods were applied to the data. Fractal analysis of the Lagrangian trajectories showed a fractal dimension of 1.21 +/- 0.02 with a scaling range of 83 - 343 km. The fractal dimension of …

Population-Dynamics Of Juvenile Caribbean Spiny Lobster, Panulirus-Argus, In Florida Bay, Florida, David Forcucci, Mark J. Butler Iv, John H. Hunt

Biological Sciences Faculty Publications

Despite a wealth of information on the growth and population dynamics of sub-adult and adult Caribbean spiny lobsters (Panulirus argus), there is far less information about younger juveniles under natural conditions. Here we describe growth and population dynamics of juvenile spiny lobsters (12-68 mm carapace length, CL) that we have studied for 14 months (October 1988-December 1989) using mark-recapture techniques in a hardbottom community in Florida Bay, Florida. We also monitored the supply of postlarvae into the region in 1988 and 1989 using Witham-type surface collectors in an effort to link peak periods of settlement of postlarvae with subsequent cohorts …

Invariant Manifolds Of A Toy Climate Model, Michael Toner

Mathematics & Statistics Theses & Dissertations

According to astronomical theory, ice ages are caused by variations in the Earth's orbit. However, ice core data shows strong fluctuations in ice volume at a low frequency not significantly present in orbital variations. To understand how this might occur, the dynamics of a two dimensional nonlinear differential equation representing glacier/temperature interaction of an idealized climate was studied. Self sustained oscillation of the autonomous equation was used to model the internal mechanisms that could produce these fluctuations. Periodic parametric modulation of a damped internal oscillation was used to model periodic climate response at double the external modulation period. Both phenomena …

Periodic And Homoclinic Orbits In A Toy Climate Model, M. Toner, A. D. Kirwan Jr.

Mathematics & Statistics Faculty Publications

A two dimensional system of autonomous nonlinear ordinary differential equations models glacier growth and temperature changes on an idealized planet. We apply standard perturbative techniques from dynamical systems theory to study small amplitude periodic orbits about a constant equilibrium. The equations are put in cononical form and the local phase space topology is examined. Maximum and minimum periods of oscillation are obtained and related to the radius of the orbit. An adjacent equilibrium is shown to have saddle character and the inflowing and outflowing manifolds of this saddle are studied using numerical integration. The inflowing manifolds show the region of …

A Comparison Of No And N20 Production By The Autophic Nitrifier Nitrosomonas Europaea And The Heterotrophic Nitrifier Alcaligenes Faecalis, Iris C. Anderson, Mark Poth, Julie Homstead, David J. Burdige

OES Faculty Publications

Soil microorganisms are important sources of the nitrogen trace gases NO and N₂O for the atmosphere. Present evidence suggests that autotrophic nitrifiers such as Nitrosomonas europaea are the primary producers of NO and N₂O in aerobic soils, whereas denitrifiers such as Pseudomonas spp. or Alcaligenes spp. are responsible for most of the NO and N₂O emissions from anaerobic soils. It has been shown that Alcaligenes faecalis, a bacterium common in both soil and water, is capable of concomitant heterotrophic nitrification and denitrification. This study was undertaken to determine whether heterotrophic nitrification might be …

Circulation, Fall 1993, Center For Coastal Physical Oceanography, Old Dominion University

CCPO Circulation

Fall 1993 issue of CCPO Circulation featuring article "Palmer Long-Term Ecological Research (LTER)"

Identification And Quantitation Of Volatile Amines In Chesapeake Bay Sediments, Neeraja Y. Krishna

Chemistry & Biochemistry Theses & Dissertations

Sediments from different parts of the Chesapeake Bay were analyzed to determine the presence of volatile amines. A HF-HCl extraction method was used to extract both exchangeable and fixed amines from the sediments and a purge-and-trap technique was used to concentrate the amines. Following derivatization with heptafluorobutyric anhydride (HFBA), the HFBA-amines were analyzed by gas chromatography with electron capture detection and with mass spectrometric detection. One primary amine, i-amylamine with a concentration ranging from 0. 78 nmoles/g dry weight to < 0.05 nmoles/g dry weight was found in a total of twenty seven samples collected on three different dates in 1993. Another primary amine, 2-methylbutylamine with a concentration ranging from 0.18 nmoles/g dry weight to < 0.05 nmoles/g dry weight was found in a total of twenty three samples collected on three different dates in 1993. A secondary amine, diethylamine was detected but could not be quantified in a total of seven samples collected in September 1993. The concentrations of these amines varied with location in the Bay, depth in the sediment, and time of year the sediments were collected. The origin of i-amylamine and 2-methylbutylamine might be from the biological decarboxylation of amino acids leucine and isoleucine, respectively. The origin of diethylamine is unknown.

Description, Distribution, And Abundance Of The Blue Crab, Callinectes Sapidus (Rathbun), Spawning Stock Of The Lower Chesapeake Bay, Patrick John Geer

OES Theses and Dissertations

The lower Chesapeake Bay spawning stock of the blue crab, Callinectes sapidus, (Rathbun), is examined for seven years (1986 - 1992) in an attempt to better understand stock behavior. Three methods of post-stratification are used to describe the distribution and movement of the population over time. The three methods, density strata, geographic zones, and depth strata, did well in explaining movements of the population, indicating a trend of increased concentration of blue crabs near the eastern Bay late in the spawning season - October. The data suggest a bimodal period of spawning and a trimodal period of abundance. The …

Age, Growth, And Mortality Of Atlantic Croaker, Micropogonias Undulatus, In The Chesapeake Bay Region, With A Discussion Of Apparent Geographic Changes In Population Dynamics, Luiz R. Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Atlantic croaker, Micropogonias undulatus, collected from commercial catches in Chesapeake Bay and in Virginia and North Carolina coastal waters during 1988-1991 (n=1,967) were aged from transverse otolith sections. Ages 1-8 were recorded, but eight-year-old fish were rare. Marginal increment analysis showed that for ages 1-7, annuli are formed once a year during the period April-May. Otolith age readings were precise: >99% agreement within and between readers. Observed lengths-at-age were highly variable and growth rate decreased after the first year. Despite the high variability in sizes-at-age, observed lengths for ages 1-7 fit the von Bertalanffy growth model (r2=0.99; n=753) well. …

Effect Of Wind Changes During The Last Glacial Maximum On The Circulation In The Southern Ocean, John M. Klinck, David A. Smith

CCPO Publications

Present-day surface wind stress climatology is manipulated to simulate wind conditions during the last glacial maximum. These estimated wind fields force a one-layer, wind-driven numerical model of the southern ocean to determine if a change in the strength of the surface wind stress can shift the location of the Antarctic Polar Front, which is part of the Antarctic Circumpolar Current. A change in the forcing by a factor of 0.5-2.0 results in a change in the speed of the flow by an identical factor with no change in position. However, if the present-day wind climatology is shifted meridionally there is …

Production And Decomposition Of Hydrogen Peroxide By Marine Phytoplankton, Dong-Beom Kim

OES Theses and Dissertations

H₂0₂ in seawater has complicated sources and sinks. The relative importance of biological regulation of H₂0₂ compared to other processes is not well understood. In addition, environmental factors affecting the biological regulation of H202 are largely unknown. Marine phytoplankton was examined for the kinetics of the production and decomposition of H₂0₂ in the dark. Effects of varying environmental factors such as light, temperature, salinity, nutrients, amino acids, trace metals and growth phase, were examined. H₂0₂ was determined with the scopoletin-fluorescence decay method.

Five out of 11 species produced …

The Biogeochemistry Of Iodine In Seawater, Lingsu Zhang

OES Theses and Dissertations

Iodate and iodide are the two major species of iodine in seawater. In comparison to iodate, iodide is thermodynamically unstable in oxic seawater. The conversion (or reduction) of iodate to iodide may be mediated via biological activities. Since biological activities vary with the season, the conversion of iodate to iodide may also vary seasonally. The conversion (or oxidation) of iodide to iodate is thermodynamically feasible, but the mechanism is poorly known. Hydrogen peroxide, which is ubiquitous in surface seawater, may oxidize iodide to iodate.

Water samples were collected in the middle and lower Chesapeake Bay in different seasons between 1990 …

Paleobathymetric Interpretation Of Pleistocene Sediments In The South Padre Island Area, Northwestern Gulf Of Mexico, Using Benthic Foraminiferal Morphology, Karen Ianthe Kruebbe-Belwood

OES Theses and Dissertations

This study tested the validity of using intraspecific variation in benthic foraminifera as a means for determining Pleistocene paleobathymetry. Canonical variate analysis was used as a means for determining visually undetectable but statistically significant differences in the morphology of selected species. Two species, Cassidulina subglobosa and Uvigerina peregrina, were collected from Pleistocene well cuttings from the northwest Gulf of Mexico. The canonical analysis involved comparing the intraspecific variation of these Pleistocene species to their counterparts occurring in the modern Gulf of Mexico, where intraspecific variation was previously analyzed and found to be sufficient to allow detection of bathymetric differences …

Modeling Nutrient And Plankton Processes In The California Coastal Transition Zone, John Roland Moisan

OES Theses and Dissertations

Two time- and space-dependent, physical-bio-optical models have been developed for the California Coastal Transition Zone (CTZ) region with the overall objective of understanding and quantifying the processes th at contribute to the spatial and temporal development of nutrient and plankton distributions in the CTZ. The first of these models considers only time- and vertical processes at specific locations in the CTZ. The model food web components include: silicate, nitrate, ammonium, two phytoplankton size fractions, copepods, doliolids, euphausiids and a detritus pool. The wavelength dependent attenuation of the subsurface irradiance field, due to sea water, phytoplankton pigment concentrations and dissolved organic …

The Biogeochemistry Of Hydrogen Sulfide In The Open Ocean, Joël Radford-Knoery

OES Theses and Dissertations

Hydrogen sulfide is a poorly quantified component of the global sulfur cycle. In seawater, its dissolved species (dissolved sulfide) can react with trace metals to form dissolved complexes and insoluble compounds. Therefore, the study of dissolved° sulfide in the open ocean can yield a better understanding of the biogeochemical cycles of sulfur and trace metals.

The biogeochemical cycling of dissolved sulfide was examined using specially developed sampling and analytical methods. In the western North Atlantic and central Equatorial Pacific Oceans, total dissolved sulfide concentrations ranged from /L; they were highest, in the mixed layer and decreased with depth. The depth …