Oceanography and Atmospheric Sciences and Meteorology Commons^™

Investigating Primary Succession Following The Retreat Of The Breiðamerkurjökull Glacier, Iceland, Ella Roelofs

Independent Study Project (ISP) Collection

The accelerating rates of glacier retreat around the world as a result of climate change make the study of primary succession in expanding forefields increasingly important. While this is a well studied topic in many parts of the world, little data exists specific to Iceland. This study investigated vegetation development along a chronosequence of eight time periods in the Breiðamerkurjökull outwash plain. Data was collected on percent vegetation cover, dominant species, the number of unique plant groups, and percent cover of five substrate types at 10 plots (0.55 x 0.55 m quadrats) per time period. Important findings include the fact …

The Effect Of Water Management And Ratoon Rice Cropping On Methane Emissions And Harvest Yield In Arkansas, Marguerita Leavitt

Graduate Theses and Dissertations

Sustainable intensification of rice farming is crucial to meeting human food needs while reducing environmental impacts. Rice produces 8% of all anthropogenic CH4, which is a potent greenhouse gas. CH4 emissions can potentially be reduced by cultivation practices that minimize the number of days the fields are saturated, such as dry-seeding instead of water-seeding and irrigation using the alternate wetting and drying (AWD) technique instead of delayed, continuous flooding (DF). Ratoon cropping, wherein a second crop of rice is grown from the harvested stubble of the first crop, can be used to produce additional yield with minimal labor, but may …

Optimization Techniques For Soil Organic Carbon Prediction Using Mid-Infrared Spectroscopy, Minerva J. Dorantes

Graduate Theses and Dissertations

Resource-efficient techniques for accurate soil carbon estimation are necessary to satisfy the increasing demand for spatiotemporal data. In the last thirty years, mid-infrared (MIR) soil spectroscopy has developed as an accurate, rapid, cost-effective, and non-destructive technique for soil organic carbon (SOC) analysis. In soil spectroscopy, a calibration model relates spectral data to a corresponding measured soil property and is subsequently used to predict this value from new spectral data. Various optimization techniques have been used to improve the statistical performance of calibrations; however, there is little consensus on the conditions that make these techniques effective. The objectives of this research …

Prediction Of Cultivation Areas For The Commercial And An Early Flowering Wild Accession Of Salvia Hispanica L. In The United States, Mohammad Hassani, Thomas Piechota, Hagop S. Atamian

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Salvia hispanica L., commonly known as chia, is a plant-based alternative to seafood and is rich in heart-healthy omega-3 fatty acid, protein, fiber, and antioxidants. In the Northern Hemisphere, chia flowering is triggered by the fall equinox (12-h light and dark, early October) and the seeds mature after approximately three months. Chia is sensitive to frost and end of season moisture which limits its cultivation to small areas in regions with temperate climate. The U.S. chia import has increased considerably over the years; however, chia is not widely cultivated in the United States. This study used the historical U.S. temperature …

Effects Of Feed Moisture Content, Soybean Ratio And Barrel Temperature On Physical And Functional Properties Of Extruded Maize-Soybean Flour Blends, Robert Mugabi, Stellah Byakika, Ivan Muzira Mukisa

Tanzania Journal of Science

The effects moisture content, temperature and soybean ratio on expanded product characteristics of extruded maize-soybean blends were studied. Response surface methodology was used to study the effects of extrusion conditions on extrudate properties taking barrel temperature (BT), feed moisture content (FM) and soybean flour ratio (SR) as factors. Expansion ratio (ER), water absorption index (WAI), water solubility index (WSI), hardness and colour (b* - (+) yellowness) of the extrudates were determined. BT and FM had significant effects on ER (p < 0.05). At low FM levels, ER increased with BT. It was observed that both FM and BT significantly affected WAI and WSI. WAI increased as FM increased. Increasing FM to 20% resulted in a decrease in WSI, beyond which an increase was observed. Hardness increased significantly as feed moisture content increased. High SR content significantly increased the extrudate hardness. FM had no significant effect on colour. Colour increased as the SR and BT increased. Significant regression models explained the effects of SR, FM, and BT on all response variables. All of the response variables' R2, were higher than 0.89. Keywords: Maize, Soybean, moisture content, extrusion

Developing A Miniature Smart Boat For Marine Research, Michael Isaac Eirinberg

Computer Engineering

This project examines the development of a smart boat which could serve as a possible marine research apparatus. The smart boat consists of a miniature vessel containing a low-cost microcontroller to live stream a camera feed, GPS telemetry, and compass data through its own WiFi access point. The smart boat also has the potential for autonomous navigation. My project captivated the interest of several members of California Polytechnic State University, San Luis Obispo’s (Cal Poly SLO) Marine Science Department faculty, who proposed a variety of fascinating and valuable smart boat applications.

Water: The Gift And The Curse: A Climate Change Preparedness Study On An Increased Rainfall Scenarios In The Yunguilla Cloud Forest, Ecuador, Emilia Dick Fiora Del Fabro

Independent Study Project (ISP) Collection

The purpose of this project was to try and better understand the risks posed to the Yunguilla community in an increased rainfall climate change scenario. While climate modeling is not exact, many models do predict increased rain and storm intensity in this area (“Explainer…”, 2018). This project studies erosion risk, and the potential damage to crops through a series of experiments and mapping.

The first experiment used three hydration percentages 50, 75 and 100, to water two crop types, Fragaria and Caspium, and monitored plant health to see the water's effect. The hydraulic stress testing did not model an increased …

Belowground Mechanism Reveals Climate Change Impacts On Invasive Clonal Plant Establishment, Surendra Bam, Jacqueline P. Ott, Jack L. Butler, Lan Xu

Natural Resource Management Faculty Publications

Climate change and disturbance can alter invasion success of clonal plants by differentially affecting the clonal traits influencing their establishment as young plants. Clonal traits related to the vegetative reproduction of native Pascopyrum smithii and non-native Bromus inermis grass seedlings were evaluated under altered precipitation frequencies and a single grazing event. Pascopyrum smithii maintained similar vegetative reproduction under three simulated precipitation frequencies whereas B. inermis vegetative reproduction declined as precipitation became more intermittent. Vegetative reproduction of the non-native B. inermis was greater than the native P. smithii under all simulated precipitation frequencies except the most intermittent scenario. A single grazing …

Photorespiration In Eelgrass (Zostera Marina L.): A Photoprotection Mechanism For Survival In A Co₂-Limited World, Billur Celebi-Ergin, Richard C. Zimmerman, Victoria J. Hill

OES Faculty Publications

Photorespiration, commonly viewed as a loss in photosynthetic productivity of C3 plants, is expected to decline with increasing atmospheric CO₂, even though photorespiration plays an important role in the oxidative stress responses. This study aimed to quantify the role of photorespiration and alternative photoprotection mechanisms in Zostera marina L. (eelgrass), a carbon-limited marine C3 plant, in response to ocean acidification. Plants were grown in controlled outdoor aquaria at different [CO₂]aq ranging from ~55 (ambient) to ~2121 μM for 13 months and compared for differences in leaf photochemistry by simultaneous measurements of O₂ flux and …

Geomorphic Gradients In Shallow Seagrass Carbon Stocks, Jahson Berhane Alemu, Siti Maryam Yaakub, Erik S. Yando, Rachel Yu San Lau, Cheng Chang Lim, Jun Yu Puah, Daniel A. Friess

Biological Sciences Faculty Publications

Seagrass meadows are important sinks of organic carbon (C_org), in particular the near-surface C_org pool (≤ 15 cm) compared to deeper sediments. Near-surface carbon is highly susceptible to disturbance and loss to the atmosphere, however, inadequate accounting for variability in this pool of carbon limits their uptake into carbon accounting frameworks. We therefore investigated the spatial variability in seagrass near-surface C_org and biomass C_org across different geomorphic (estuary, lagoonal and reef-associated) and community typologies (pioneer and persistent). Near-surface C_org stock in vegetated areas (25.78 Mg C_org ha⁻¹ ± 26.64) was twice that …

South Dakota Farmers’ Perceived Extreme Weather Frequency And Adaptation Measures, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys of eastern South Dakota (SD) commodity crop producers with the support of the South Dakota Corn Utilization Council. Using publicly available addresses of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked to take a follow up survey. 94 were ineligible, and 350 responded for a 59% response rate. Producers could take the survey online or via …

Nutrient Uptake And Management Strategies In Recirculating Hydroponic Systems, Lauren Leigh Houston

Graduate Theses and Dissertations

Nutrient management in recirculating hydroponic systems requires the periodic replenishment of water and nutrients to the nutrient solution reservoir. Common nutrient management strategies, such as replenishing the reservoir with fresh solution and maintaining a constant solution electrical conductivity (EC), can lead to ion accumulation and nutrient imbalances since nutrients are taken up by roots and depleted from solution at different rates. To avoid nutritional disorders, commercial growers typically dump and replace the hydroponic solution periodically, which is wasteful and has an economic cost. A potential alternative is to specially formulate the nutrient replenishment solution to balance the supply of nutrients …

Making Agriculture Carbon Neutral Amid A Changing Climate: The Case Of South-Western Australia, Ross Kingwell

Climate Science Research Articles

Making Australian agriculture carbon neutral by 2050 is a goal espoused by several agricultural organisations in Australia. How costly might it be to attain that goal, especially when adverse climate change projections apply to agriculture in southern Australia? This study uses scenario analysis to examine agricultural emissions and their abatement via reforestation in south-western Australia under projected climate change. Most scenarios include the likelihood of agricultural emissions being reduced in the coming decades. However, the impact of projected adverse climate change on tree growth and tree survival means that the cost of achieving agricultural carbon neutrality via reforestation is forecast …

2022 Western Australian Crop Sowing Guide, B. Shackley, B. Paynter, J. Bucat, M. Seymour, S. Power

Bulletins 4000 -

Welcome to the 2022 edition of the Crop Sowing Guide for WA, which introduces 27 new variety releases: three wheat, nine barley (three recently accredited for malt and six currently under malt evaluation), twelve canola, two field pea and a lentil.

The Crop Sowing Guide for WA has been compiled by officers in the Department of Primary Industries and Regional Development. It provides information to support variety decisions for each of the major crops for the upcoming season.

In this edition, lupin agzones have been reduced from 8 agzones to 6 so that all varieties for each of the major …

Land Use As A Predictor Of Water Hyacinth (Eichhornia Crassipes) Presence On The Entebbe Coast Of Lake Victoria, Uganda, Zachary Hoffman

Independent Study Project (ISP) Collection

Lake Victoria is shared amongst Tanzania, Kenya, and Uganda and has tremendous ecological, economical, and cultural significance. Within the lake system, there are several problems, including the proliferation of an invasive weed, water hyacinth (Eichhornia crassipes). Therefore, this study aims to assess several factors that may correlate with water hyacinth proliferation. The specific objectives are (1) to identify possible correlations of water hyacinth density and land use around Entebbe, Uganda, and (2) to identify annual trends in water hyacinth coverage, to better inform policy and conservation efforts. Entebbe has a coastline of six land cover types: flooded vegetation, trees, grasses, …

Wildflower Pollen Quality In Roadside Habitats, With Particular Emphasis On Hedera Helix, Aoife Mcmullin, Paul Hamilton

SURE Journal: Science Undergraduate Research Experience Journal

The quality of air is of more significance today than ever before. Human population growth and pollutants emitted through fossil fuel consumption put pressures on air quality. It is widely acknowledged that atmospheric pollutants negatively impact human health; the same is also true for the health of wildlife and plants exposed to these pollutants (Brunekreef & Holgate, 2002; EEA, 2019; Schiavoni, et al., 2017). Pollen and seed formation of flowering plants have been affected when grown in areas of poor air quality (Azzazy, 2016; Sénéchal, et al., 2015). The purpose of this research was to assess pollen of …

Physiological And Molecular Responses Of Eurythermal And Stenothermal Populations Of Zostera Marina L (Eelgrass) To Climate Change, Carmen C. Zayas-Santiago

OES Theses and Dissertations

As CO₂ levels in Earth’s atmosphere and oceans steadily rise, varying organismal responses may produce ecological losers and winners. Increased ocean CO₂ can enhance seagrass productivity and thermal tolerance, providing some compensation for climate warming. However, the consistency of this CO₂ effect across populations of cosmopolitan species such as Zostera marina L. (eelgrass) remains largely unknown. This study analyzed whole-plant performance metabolic profiles and gene expression patterns of distinct eelgrass populations in response to CO₂ enrichment. Populations were transplanted from Nisqually Landing and Dumas Bay, two cold water environments in Puget Sound, WA (USA) that rarely …

Using Uncrewed Aerial Vehicles For Identifying The Extent Of Invasive Phragmites Australis In Treatment Areas Enrolled In An Adaptive Management Program, Colin Brooks, Charlotte Weinstein, Andrew Poley, Amanda Grimm, Nicholas Marion, Laura Bourgeau-Chavez, Dana Hansen, Kurt Kowalski

Michigan Tech Publications, Part 1

Higher spatial and temporal resolutions of remote sensing data are likely to be useful for ecological monitoring efforts. There are many different treatment approaches for the introduced European genotype of Phragmites australis, and adaptive management principles are being integrated in at least some long-term monitoring efforts. In this paper, we investigated how natural color and a smaller set of near-infrared (NIR) images collected with low-cost uncrewed aerial vehicles (UAVs) could help quantify the aboveground effects of management efforts at 20 sites enrolled in the Phragmites Adaptive Management Framework (PAMF) spanning the coastal Laurentian Great Lakes region. We used object-based image …

In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson

Student Research Symposium

In Silico Screening of Natural Compounds as Novel Drug Targets for The Treatment of Multiple MyelomaRousselene Larson1 2, Naveen Duhan1, and Rakesh Kaundal1 2 *1Department of Plants, Soils, and Climate, College of Agriculture and Applied Sciences; 2Bioinformatics Facility, Center for Integrated BioSystems; Utah State University, Logan, UT 84322 USA* corresponding author (e-mail: [email protected])Telephone: +1 (435) 797-4117Fax: +1 (435) 797-2766Abstract: Multiple Myeloma (MM) is an incurable hematological malignancy cancer characterized by excessive clonal plasma cell proliferation in the bone marrow. In the United States, MM is the second most prevalent type of cancer that affects about 4 in 100,000 Americans. Toxicity …

Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel

Student Research Symposium

Nighttime irrigation is a widespread strategy to conserve water, as it reduces wind drift and evaporation loss (WDEL). However, daytime sprinkler irrigation may also conserve water by lowering the temperature and increasing the humidity of crop microclimates, thereby reducing evapotranspiration (ET). Therefore, the objectives of this study include: 1) quantify whether a water savings exists between day and night irrigation with a water balance approach, 2) analyze the microclimate effects by irrigation timing to determine any changes to WDEL and evaporative demand, and 3) assess the quality and yield response of two urban crops. In 2019-21, we established 12 field …

Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh

Student Research Symposium

Maize is the largest crop in the world in terms of production. Utah, maize is a potential fodder crop. With increasing climate change, soil salinity is also increasing worldwide. Soil salinity is very detrimental to plants' growth and development and crop production. For a fodder crop, plant biomass is an important trait, and maize biomass is adversely affected by salinity stress, especially at the seedling stage. A Selection of salt-tolerant breeding material is a time-consuming process and its complexity is further increased by significant heterogeneity in soil salinity under field based evaluation. Genomic prediction is an emerging tool that can …

Transgenic Expression Of Prunus Persica Salt Overly Sensitive 2 (Ppsos2) In Atsos2 Mutant Imparts Salt Tolerance In Arabidopsis, Vishal Singh

Student Research Symposium

Salinity is one of the major environmental stresses that affect crop growth and productivity. Almond crop has a great potential for Utah as a cash crop and salinity is one of the stresses affecting its growth and yield. Although almond trees are sensitive to salt stress, salinity-tolerant rootstocks can play a significant role in sustaining crop production in semiarid areas. Salinity tolerance has a complex mechanism with many genes acting in different pathways. Understanding the role of potential candidate genes is an important aspect of genomics assisted improvement of stress tolerance. In this study, functional complementation of the Prunus persica …

Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh

Student Research Symposium

Climatic change is one of the biggest threats to the ecosystem and biodiversity by enhancing environmental stresses. Environmental stresses such as biotic and abiotic stresses affect plant health and reduce crop production. The rhizosphere microbiome of a plant plays a significant role in a plant's defense against various biotic and abiotic stresses. In this study, we are investigating the microbiome diversity of bulk soil, rhizosphere, and endosphere of Ceanothus velutinus, snowbrush. Ceanothus is an evergreen native plant that is usually found in dry areas and thrives well in harsh conditions. The snowbrush samples were collected from different locations 1920m, 1950m, …

Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh

Student Research Symposium

Climatic change-induced environmental stresses affect crop production. Drought is such a stress which affect crop production and landscaping adversely. Native plants are great for low water use landscaping and can adapt to the natural environment. USU Center for Water-Efficient Landscaping has released a list of native plants that can be used for this purpose. This study focuses on a native plant Ceanothus velutinus (snowbrush) which is an evergreen plant native to western North America. It thrives well in harsh conditions and can act as ornamental plant in low water use landscaping but is difficult to propagate under landscape conditions. Here, …

Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan

Student Research Symposium

Abstract: With the advent of Next-Generation Sequencing (NGS) technologies, numerous data is being generated every day, however, streamlined analysis remains a big hurdle to efficiently use the technology. A large number of algorithms, statistical methods, and software tools have been developed in recent years to perform the individual analysis steps of various NGS applications. Some NGS applications data analysis procedures are therefore very complex, requiring several program tools to be downloaded for their various processing steps. There is a significant room for the development of scalable computing environments that link the individual software components to automated workflows to efficiently and …

Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan

Student Research Symposium

Abstract: Nitrification is an important microbial two-step transformation in the global nitrogen cycle, as it is the only natural process that produces nitrate within a system. The functional annotation of nitrification-related enzymes has a broad range of applications in metagenomics, agriculture, industrial biotechnology, etc. The time and resources needed for determining the function of enzymes experimentally are restrictively costly. Therefore, an accurate genome-scale computational prediction of the nitrification-related enzymes has become much more important.In this study, we developed an alignment-free computational approach to determine the nitrification-related enzymes from the sequence itself. We propose deepNEC, a novel end-to-end feature selection and …

Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller

Student Research Symposium

As agriculture intensifies, the world faces a dual challenge of increasing food production while reducing impacts of excess reactive nitrogen (N) in the environment. A field study examining different N sources in corn silage under semi-arid conditions was conducted at the Greenville farm in northern Utah (41°45’ N, 1111°48’52 W) since 2012. The experimental design is a randomized complete block design with four blocks and four treatments: control (no nitrogen), low ammonium sulfate (AS 112 kg N/ha), high ammonium sulfate (AS 224 kg N/ha), and steer manure compost (224 kg total N/ha). We examined yield, nitrogen use efficiency (NUE), and …

How Does Climate Variability Influence Agroforestry Plant Selection?

Working Trees (USDA-NAC)

How does climate variability influence agroforestry plant selection?

Changing annual crops in response to climate change is relatively straightforward. However, because trees, shrubs, and other perennial crops can take years to become productive, the choice of perennial plant will impact the operation for many years. Plant selection involves deciding which crops to grow or manage, including variety, seed lot, or other plant genetic characteristics. As farmers and forest managers face extreme weather events and climate variability, they should consider plants that are likely to be resilient now and in the future. Land managers can also use agroforestry to adapt to …

An Assessment Of Terrestrial Decapoda Diversity Across Three Ecological Zones In Mida Creek, Kenya, Reese Yount

Independent Study Project (ISP) Collection

Mangroves make up one of the most effective natural remedies at combating climate change today. They represent great commercial interest worldwide and yet, are being degraded at an unsustainable rate. If successful mangrove conservation plans are to be implemented for our posterity, mangrove ecosystems need to be better understood at the community level. Mangrove crabs make up the most diverse and populace mangrove inhabitants. They are classified as ecosystem engineers and their potential for being used as bioindicators makes them integral to assessing mangrove health. Yet, their diversity and distribution patterns are not well understood. The aim of this study …

Impact Of Ocean Carbonation On Long-Term Regulation Of Light Harvesting In Eelgrass Zostera Marina, Billur Celebi-Ergin, Richard C. Zimmerman, Victoria J. Hill

OES Faculty Publications

Seagrasses account for approximately 10% of the total carbon stored in the ocean, although photosynthesis of seagrasses is carbon-limited at present oceanic pH levels. Therefore, increasing atmospheric CO₂ concentration, which results in ocean acidification/carbonation, is predicted to have a positive impact on seagrass productivity. Previous studies have confirmed the positive influence of increasing CO₂ on photosynthesis and survival of the temperate eelgrass Zostera marina, but the acclimation of photoprotective mechanisms in this context has not been characterized. We aimed to quantify the long-term impacts of ocean acidification on photochemical control mechanisms that promote photosynthesis while simultaneously protecting …