Oceanography and Atmospheric Sciences and Meteorology Commons^™

The Vulnerability Of Indo-Pacific Mangrove Forests To Sea-Level Rise, Catherine E. Lovelock, Donald R. Cahoon, Daniel A. Friess, Glenn R. Guntenspergen, Ken W. Krauss, Ruth Reef, Kerrylee Rogers, Megan L. Saunders, Frida Sidik, Andrew Swales, Neil Saintilan, Le Xuan Thuyen, Tran Triet

United States Geological Survey: Staff Publications

Sea-level rise can threaten the long-term sustainability of coastal communities and valuable ecosystems such as coral reefs, salt marshes and mangroves^1,2. Mangrove forests have the capacity to keep pace with sea-level rise and to avoid inundation through vertical accretion of sediments, which allows them to maintain wetland soil elevations suitable for plant growth³. The Indo- Pacific region holds most of the world’s mangrove forests⁴, but sediment delivery in this region is declining, owing to anthropogenic activities such as damming of rivers⁵. This decline is of particular concern because the Indo-Pacific region is …

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- October 2015, Martha Shulski, Natalie Umphlett, Bill Sorensen, Glen Roebke, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Staff spotlight...........................1

New website design and products.....................................2

Training workshops................3

AWDN information.................4

Update on regional climate conditions and El Niño..........4

Research highlight..................5

Outreach/engagement.........5

Recent and upcoming travel and activities.............................6

Droughtscape, Fall 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s column.

NDMC 20th anniversary 2

Employment opportunity

Third quarter 2015 climate summary

Third quarter 2015 impacts summary

Workshop in Ethiopia

San Antonio multi-hazard tournament

Healthy soil is drought buffer

U2U Award

Cost-benefit analysis for utilities managing drought

NDMC helps with rural poll questions on climate

Introducing our post-docs

South Korean visitors

Rapid Label-Free Detection Of E. Coli Using Antimicrobial Peptide Assisted Impedance Spectroscopy, Keren Jieng, Hashem Etayash, Sarfuddin Azmi, Selvaraj Naicker, Mahtab Hassanpourfard, Parmiss Mojir Shaibani, Garima Thakur, Kamaljit Kaur, Thomas Thundat

Pharmacy Faculty Articles and Research

There is an increasing demand for rapid detection of waterborne pathogens to monitor drinking water safety. We demonstrate a compact, label-free sensor array for rapid detection of Escherichia coli (E. coli) in contaminated water samples using antimicrobial peptide assisted impedimetric sensor platform. Interdigitated electrode arrays immobilized with the antimicrobial peptide Colicin V (ColV) were used to screen the affinity towards different bacterial strains by monitoring impedance variations in real-time. This ColV assisted impedance biosensor exhibited high selectivity towards Gram-negative strains particularly towards E. coli strains. This selective detection of E. coli from other strains was observed at 10 …

Radiocarbon Isotopic Classification Of Deep Tropical Forest Soils, Brooke Butler, Karis J. Mcfarlane, Jennifer Pett-Ridge, Katherine A. Heckman

STAR Program Research Presentations

Tropical forest soils have an important role in global carbon (C) stocks. Small changes in the cycling of C could drastically affect atmospheric carbon dioxide (CO2) concentrations and active cycling of carbon in a forest community. Currently, little is understood of how tropical forest soils will respond to the increasing global temperatures. To examine the effects of warming/ drought on losses of older versus younger soil C pools, we implemented radiocarbon (14C) isotopic characterization of various soil plot samples and depths from the Luquillo Experimental Forest, Puerto Rico. 14C was measured using Accelerated Mass Spectrometry (AMS) from catalytically condensed carbon …

Modeling Gross Primary Production Of Maize And Soybean Croplands Using Light Quality, Temperature, Water Stress, And Phenology, Anthony L. Nguy-Robertson, Andrew E. Suyker, Xiangming Xiao

School of Natural Resources: Faculty Publications

Vegetation productivity metrics, such as gross primary production (GPP) may be determined from the efficiency with which light is converted into photosynthates, or light use efficiency (ϵ). Therefore, accurate measurements and modeling of ϵ is important for estimating GPP in each ecosystem. Previous studies have quantified the impacts of biophysical parameters on light use efficiency based GPP models. Here we enhance previous models utilizing four scalars for light quality (i.e., cloudiness), temperature, water stress, and phenology for data collected from both maize and soybean crops at three Nebraska AmeriFlux sites between 2001 and 2012 (maize: 26 field-years; soybean: …

Droughtscape, Summer 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s column

New Drought Risk Management Research Center

Second quarter 2015 climate summary

Second quarter 2015 impacts summary

Caribbean region an innovator in drought early warning

Wind River Reservation tribes move toward drought planning

Ranchers, U.S. Forest Service, University of Arizona co-develop drought plans

Summer blockbuster from CoCoRaHS: Assessing Drought in the U.S

Western states drought coordinators meet

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- July 2015, Martha Shulski, Natalie Umphlett, Bill Sorensen, E. Hunt, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Staff spotlight...........................1

Visit from Office of Science and Technology Policy...........2

Partnership spotlight.............2

AWDN information.................3

Update on regional climate conditions..................................3

Product highlight....................4

Research highlight..................4

Outreach/engagement.........5

Recent and upcoming travel and activities.............................6

Short-Term Response Of Holcus Lanatus L. (Common Velvetgrass) To Chemical And Manual Control At Yosemite National Park, Usa, Laura J. Jones, Steven M. Ostoja, Matthew L. Brooks, Martin Hutten

United States Geological Survey: Staff Publications

One of the highest priority invasive species at both Yosemite and Sequoia and Kings Canyon national parks is Holcus lanatus L. (common velvetgrass), a perennial bunchgrass that invades mid-elevation montane meadows. Despite velvetgrass being a high priority species, there is little information available on control techniques. The goal of this project was to evaluate the short-term response of a single application of common chemical and manual velvetgrass control techniques. The study was conducted at three montane sites in Yosemite National Park. Glyphosate spotspray treatments were applied at 0.5, 1.0, 1.5, and 2.0% concentrations, and compared with hand pulling to evaluate …

Uncertainty In Simulating Gross Primary Production Of Cropland Ecosystem From Satellite-Based Models, Wenping Yuan, Wenwen Cai, Anthony L. Nguy-Robertson, Huajun Fang, Andrew E. Suyker, Yang Chen, Wenjie Dong, Shuguang Liu, Haicheng Zhang

School of Natural Resources: Faculty Publications

Accurate estimates of gross primary production (GPP) for croplands are needed to assess carbon cycle and crop yield. Satellite-based models have been developed to monitor spatial and temporal GPP patterns. However, there are still large uncertainties in estimating cropland GPP. This study compares three light use efficiency (LUE) models (MODIS-GPP, EC-LUE, and VPM) with eddy-covariance measurements at three adjacent AmeriFlux crop sites located near Mead, Nebraska, USA. These sites have different croprotation systems (continuous maize vs. maize and soybean rotated annually) and water management practices (irrigation vs. rainfed). The results reveal several major uncertainties in estimating GPP which need to …

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- April 2015, Martha Shulski, Natalie A. Umphlett, Bill Sorensen, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Staff spotlight...........................1

Stakeholder engagement activities......................................2

Partnership spotlight.............2

AWDN information.................3

Update on regional climate conditions..................................3

Product highlight....................4

Research highlight..................4

Outreach events......................5

Recent and upcoming travel and activities.............................6

Drougthscape, Spring 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s column.

South Plains ranch workshops 3

First quarter drought summary

First quarter impacts summary

Gary’s favorite pond, D1-4

NDMC’s Haigh leads U2U pubs

SW Montana watersheds convene

Wind River monitors drought

Morocco’s new drought index

Northeast Brazil drought monitoring

EU’s drought initiative

U.S. Drought Monitor Forum

How Colorado tourism coped in 2012

Productivity, Absorbed Photosynthetically Active Radiation, And Light Use Efficiency In Crops: Implications For Remote Sensing Of Crop Primary Production, Anatoly A. Gitelson, Yi Peng, Timothy J. Arkebauer, Andrew E. Suyker

School of Natural Resources: Faculty Publications

Vegetation productivity metrics such as gross primary production (GPP) at the canopy scale are greatly affected by the efficiency of using absorbed radiation for photosynthesis, or light use efficiency (LUE). Thus, close investigation of the relationships between canopy GPP and photosynthetically active radiation absorbed by vegetation is the basis for quantification of LUE. We used multiyear observations over irrigated and rainfed contrasting C3 (soybean) and C4 (maize) crops having different physiology, leaf structure, and canopy architecture to establish the relationships between canopy GPP and radiation absorbed by vegetation and quantify LUE. Although multiple LUE definitions are reported in the literature, …

Multi-Scale Evaluation Of Light Use Efficiency In Modis Gross Primary Productivity For Croplands In The Midwestern United States, Qinchuan Xin, Mark Broich, Andrew E. Suyker, Le Yu, Peng Gong

School of Natural Resources: Faculty Publications

Satellite remote sensing provides continuous observations of land surfaces, thereby offering opportunities for large-scale monitoring of terrestrial productivity. Production Efficiency Models (PEMs) have been widely used in satellite-based studies to simulate carbon exchanges between the atmosphere and ecosystems. However, model parameterization of the maximum light use efficiency (ε*_GPP) varies considerably for croplands in agricultural studies at different scales. In this study, we evaluate cropland ε*_GPP in the MODIS Gross Primary Productivity (GPP) model (MOD17) using in situ measurements and inventory datasets across the Midwestern US. The site-scale calibration using 28 site-years tower measurements derives ε*_GPP values …

Training Conservation Practitioners To Be Better Decision Makers, Fred Johnson, Mitchell J. Eaton, James H. Williams, Gitte H. Jensen, Jesper Madsen

United States Geological Survey: Staff Publications

Traditional conservation curricula and training typically emphasizes only one part of systematic decision making (i.e., the science), at the expense of preparing conservation practitioners with critical skills in values-setting, working with decision makers and stakeholders, and effective problem framing. In this article we describe how the application of decision science is relevant to conservation problems and suggest how current and future conservation practitioners can be trained to be better decision makers. Though decision-analytic approaches vary considerably, they all involve: (1) properly formulating the decision problem; (2) specifying feasible alternative actions; and (3) selecting criteria for evaluating potential outcomes. Two approaches …

Phosphorus Retention In A Lowland Neotropical Stream Following An Eight-Year Enrichment Experiment, Gaston E. Small, Marcelo Ardón, John H. Duff, Alan P. Jackman, Alonso Ramírez, Frank J. Triska, Catherine M. Pringle

United States Geological Survey: Staff Publications

Human alteration of the global P cycle has led to widespread P loading in freshwater ecosystems. Much research has been devoted to the capacity of wetlands and lakes to serve as long-term sinks for P inputs from the watershed, but we know much less about the potential of headwater streams to serve in this role. We assessed storage and retention of P in biotic and abiotic compartments after an 8-y experimental P addition to a 1st-order stream in a Neotropical wet forest. Sediment P extractions indicated that nearly all P storage was in the form of Fe- and Al-bound P …

Aquatic Pollution Increases Use Of Terrestrial Prey Subsidies By Stream Fish, Johanna M. Kraus, Justin F. Pomeranz, Andrew S. Todd, David M. Walters, Travis S. Schmidt, Richard B. Wanty

United States Geological Survey: Staff Publications

1. Stream food webs are connected with their riparian zones through cross-ecosystem movements of energy and nutrients. The use and impact of terrestrial subsidies on aquatic consumers is often determined by in situ biomass of aquatic prey. Thus, stressors such as aquatic pollutants that greatly reduce aquatic secondary production could increase the need for and reliance of stream consumers on terrestrial resource subsidies.

2. To test this hypothesis, we surveyed stream fish, their diets, and resource availability in 16 subalpine streams over a regional gradient of trace metals known to strongly impact aquatic insect communities (i.e. fish prey) in …

Uranium-Series Ages Of Fossil Corals From Mallorca, Spain: The “Neotyrrhenian” High Stand Of The Mediterranean Sea Revisited, Daniel R. Muhs, Kathleen R. Simmons, Joaquín Meco, Naomi Porat

United States Geological Survey: Staff Publications

The emergent marine deposits of the Mediterranean basin have been recognized as an important record of Quaternary sea level history for more than a century. Previous workers identified what have been interpreted to be two separate high stands of sea in the late Quaternary, namely the “Eutyrrhenian” (thought to be ~120 ka) and the “Neotyrrhenian” (thought to be either ~100 ka or ~80 ka). On Mallorca, Spain, both of these named deposits lie close to present sea level, implying paleo-sea levels slightly above present during both marine isotope stages (MIS) 5.5/5e and either 5.3/5c or 5.1/5a. If these interpretations are …

Investigating Endocrine And Physiological Parameters Of Captive American Kestrels Exposed By Diet To Selected Organophosphate Flame Retardants, Kimberly J. Fernie, Vince Palace, Lisa E. Peters, Nil Basu, Robert J. Letcher, Natalie K. Karouna-Renier, Sandra L. Schultz, Rebecca S. Lazarus, Barnett A. Rattner

United States Geological Survey: Staff Publications

Organophosphate triesters are high production volume

additive flame retardants (OPFRs) and plasticizers. Shown to accumulate

in abiotic and biotic environmental compartments, little is known about the

risks they pose. Captive adult male American kestrels (Falco sparverius) were

fed the same dose (22 ng OPFR/g kestrel/d) daily (21 d) of tris(2-

butoxyethyl) phosphate (TBOEP), tris(2-chloroethyl) phosphate (TCEP),

tris(2-chloroisopropyl) phosphate (TCIPP), or tris(1,2-dichloro-2-propyl)

phosphate (TDCIPP). Concentrations were undetected in tissues (renal,

hepatic), suggesting rapid metabolism. There were no changes in glutathione

status, indicators of hepatic oxidative status, or the cholinergic system (i.e.,

cerebrum, plasma cholinesterases; cerebrum muscarinic, nicotinic receptors).

Modest …

Use Of Terrestrial Field Studies In The Derivation Of Bioaccumulation Potential Of Chemicals, Nico W. Van Den Brink, Jennifer A. Arblaster, Sarah R. Bowman, Jason M. Conder, John E. Elliott, Mark S. Johnson, Derek C.G. Muir, Tiago Natal-Da-Luz, Barnett A. Rattner, Bradley E. Sample, Richard F. Shore

United States Geological Survey: Staff Publications

Field-based studies are an essential component of research addressing the behavior of organic chemicals, and a unique line of evidence that can be used to assess bioaccumulation potential in chemical registration programs and aid in development of associated laboratory and modeling efforts. To aid scientific and regulatory discourse on the application of terrestrial field data in this manner, this article provides practical recommendations regarding the generation and interpretation of terrestrial field data. Currently, biota-to-soil-accumulation factors (BSAFs), biomagnification factors (BMFs), and bioaccumulation factors (BAFs) are the most suitable bioaccumulation metrics that are applicable to bioaccumulation assessment evaluations and able to be …

Estimating Relative Sea-Level Rise And Submergence Potential At A Coastal Wetland, Donald R. Cahoon

United States Geological Survey: Staff Publications

A tide gauge records a combined signal of the vertical change (positive or negative) in the level of both the sea and the land to which the gauge is affixed; or relative sealevel change, which is typically referred to as relative sea-level rise (RSLR). Complicating this situation, coastal wetlands exhibit dynamic surface elevation change (both positive and negative), as revealed by surface elevation table (SET) measurements, that is not recorded at tide gauges. Because the usefulness of RSLR is in the ability to tie the change in sea level to the local topography, it is important that RSLR be calculated …

Drougthscape, Winter 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s report

Central U.S. 2012 report

October-December drought summary

2014 drought summary

Caribbean capacity building

Drought impacts in 2014

California timeline 2014

UC Davis ranching workshop

NASA SMAP data

Global drought info system

Community Capitals

Evaluation and assessment

Indicator-impact research

NDMC on YouTube

Global Change And Conservation Triage On National Wildlife Refuges, Fred Johnson, Mitchell J. Eaton, Gerard Mcmahon, Raye Nilius, Michael R. Bryant, Dave Case, Julien Martin, Nathan J. Wood, Laura Taylor

United States Geological Survey: Staff Publications

National Wildlife Refuges (NWRs) in the United States play an important role in the adaptation of social-ecological systems to climate change, land-use change, and other global-change processes. Coastal refuges are already experiencing threats from sea-level rise and other change processes that are largely beyond their ability to influence, while at the same time facing tighter budgets and reduced staff. We engaged in workshops with NWR managers along the U.S. Atlantic coast to understand the problems they face from global-change processes and began a multidisciplinary collaboration to use decision science to help address them. We are applying a values-focused approach to …

Proof-Of-Concept Of Environmental Dna Tools For Atlantic Sturgeon Management, Jameson Hinkle

Theses and Dissertations

Abstract

The Atlantic Sturgeon (Acipenser oxyrinchus oxyrinchus, Mitchell) is an anadromous species that spawns in tidal freshwater rivers from Canada to Florida. Overfishing, river sedimentation and alteration of the river bottom have decreased Atlantic Sturgeon populations, and NOAA lists the species as endangered. Ecologists sometimes find it difficult to locate individuals of a species that is rare, endangered or invasive. The need for methods less invasive that can create more resolution of cryptic species presence is necessary. Environmental DNA (eDNA) is a non-invasive means of detecting rare, endangered, or invasive species by isolating nuclear or mitochondrial DNA (mtDNA) from the …

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- January 2015, Martha Shulski, Natalie Umphlett, Bill Sorensen, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Stakeholder engagement activities......................................2

AWDN news...............................3

Marketing efforts.....................3

Climate services and information................................4

Product highlight....................5

Outreach events and research highlights.................5

Recent and upcoming travel and activities.............................6

Sea Level And Turbidity Controls On Mangrove Soil Surface Elevation Change, Catherine E. Lovelock, Maria Fernanda Adame, Vicki Bennion, Matthew Hayes, Ruth Reef, Nadia Santini, Donald R. Cahoon

United States Geological Survey: Staff Publications

Increases in sea level are a threat to seaward fringing mangrove forests if levels of inundation exceed the physiological tolerance of the trees; however, tidal wetlands can keep pace with sea level rise if soil surface elevations can increase at the same pace as sea level rise. Sediment accretion on the soil surface and belowground production of roots are proposed to increase with increasing sea level, enabling intertidal habitats to maintain their position relative to mean sea level, but there are few tests of these predictions in mangrove forests. Here we used variation in sea level and the availability of …

Training Conservation Practitioners To Be Better Decision Makers, Fred Johnson, Mitchell J. Eaton, James H. Williams, Gitte H. Jensen, Jesper Madsen

United States Geological Survey: Staff Publications

Traditional conservation curricula and training typically emphasizes only one part of systematic decision making (i.e., the science), at the expense of preparing conservation practitioners with critical skills in values-setting, working with decision makers and stakeholders, and effective problem framing. In this article we describe how the application of decision science is relevant to conservation problems and suggest how current and future conservation practitioners can be trained to be better decision makers. Though decision-analytic approaches vary considerably, they all involve: (1) properly formulating the decision problem; (2) specifying feasible alternative actions; and (3) selecting criteria for evaluating potential outcomes. Two approaches …

Speed And Resolution In The Age Of Technological Reproducibility, Shawn Taylor

Theses and Dissertations

The rate of acceleration of the biologic and synthetic world has for a while now, been in the process of exponentially speeding up, maxing out servers and landfills, merging with each other, destroying each other. The last prehistoric relics on Earth are absorbing the same oxygen, carbon dioxide and electronic waves in our biosphere as us. A degraded .jpeg enlarged to full screen on a Samsung 4K UHD HU8550 Series Smart TV - 85” Class (84.5” diag.). Within this composite ecology, the ancient limestone of the grand canyon competes with the iMax movie of itself, the production of Mac pros, …

At-Grade Stabilization Structure Impact On Surface Water Quality Of An Agricultural Watershed, Kyle R. Minks, Matthew D. Ruark, Birl Lowery, Fred W. Madison, Dennis Frame, Todd D. Stuntebeck, Matthew J. Komiskey, George J. Kraft

United States Geological Survey: Staff Publications

Decades of farming and fertilization of farm land in the unglaciated/Driftless Area (DA) of southwestern Wisconsin have resulted in the build-up of P and to some extent, N, in soils. This build-up, combined with steep topography and upper and lower elevation farming (tiered farming), exacerbates problems associated with runoff and nutrient transport in these landscapes. Use of an at-grade stabilization structure (AGSS) as an additional conservation practice to contour strip cropping and no-tillage, proved to be successful in reducing organic and sediment bound N and P within an agricultural watershed located in the DA. The research site was designed as …

Interactive Effects Of Climate Change With Nutrients, Mercury, And Freshwater Acidification On Key Taxa In The North Atlantic Landscape Conservation Cooperative Region, Alfred E. Pinkney, Charles T. Driscoll, David C. Evers, Michael J. Hooper, Jeffrey Horan, Jess W. Jones, Rebecca S. Lazarus, Harold G. Marshall, Andrew Milliken, Barnett A. Rattner, John Schmerfeld, Donald W. Sparling

United States Geological Survey: Staff Publications

The North Atlantic Landscape Conservation Cooperative LCC (NA LCC) is a public–private partnership that provides information to support conservation decisions that may be affected by global climate change (GCC) and other threats. The NA LCC region extends from southeast Virginia to the Canadian Maritime Provinces. Within this region, the US National Climate Assessment documented increases in air temperature, total precipitation, frequency of heavy precipitation events, and rising sea level, and predicted more drastic changes. Here, we synthesize literature on the effects of GCC interacting with selected contaminant, nutrient, and environmental processes to adversely affect natural resources within this region. Using …