Oceanography and Atmospheric Sciences and Meteorology Commons^™

Substituting Otoliths For Chemical Analyses: Does Sagitta = Lapillus?, Nathan G. Smith, Cynthia M. Jones

OES Faculty Publications

Chemical analysis of fish otoliths has become an important technique in fisheries science with widespread applications. Most research up to this point has focused predominantly on sagittal otoliths, but the underlying assumptions may also apply to lapilli. The goal of this study was to determine whether lapilli and sagittae have the same otolith chemistry and whether one can be substituted for the other for solution-based chemical analysis in wild-captured fish. We compared the stable isotope chemistry (δ13C and δ18O) of paired sagittae and lapilli of juvenile spotted seatrout Cynoscion nebulosus collected from Chesapeake Bay seagrass beds in 2002. …

Sea Urchin Predation In Misali Island Marine Park, Nicole Esclamado

Independent Study Project (ISP) Collection

The populations of sea urchins and their main predators, triggerfish (Balistidae), wrasses (Labridae) and emperors (Lethrinidae), were studied in the extractive and non-extractive zones of the Misali Island Marine Conservation Area in order to (1) evaluate the applicability of a sea urchin-sea urchin predator model developed in Kenya’s fringing reefs, (2) gain baseline data on Misali’s coral reef, and (3) evaluate the recovery status of the protected zone. This study revealed the predictive power of the sea urchin-sea urchin predator model for the reef ecosystem of Misali Island. As expected, a decline in sea urchin predators as a gross trophic …

The Influence Of High Temperature And Two Hurricanes On The Success Of Late Season Loggerhead Nests In Broward County, Florida, In 2005, Stefanie Ouellette, Curtis M. Burney

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The success of loggerhead nests, defined as the percentage of the eggs per nest resulting in live released hatchlings, declined to unusually low levels during the latter part of the 2005 season. The mean successes were 81.1, 61.1, 32.8 and 13.4 percent for nests deposited in May, June, July and August, respectively. Many eggs from the August nests appeared to be unusually dried. There was a significant inverse relationship (P < .0001) between the daily air temperature anomaly on the day of nest deposition and the average daily success rate of loggerhead nests in 2005. The daily temperature anomaly is the deviation of the average air temperature each day from the daily climatological average values. There was also a highly significant inverse relationship between maximum daily air temperature and nest success rate in 2005. These relationships were not found in the previous two years. The actual average temperature during August in 2005 was 29.7°C, compared to 28.9 and 29.2°C in 2004 and 2003, respectively. The 2005 average was statistically different from the other two years (one way ANOVA, P < .001) and also from the climatological average temperature of 28.6°C. Mean daily success rates were less than 50 percent for nests deposited during the 50 days preceding the impact of Hurricane Katrina on August 25. Nests deposited in the first two weeks of August were also impacted by Hurricane Rita. Mean daily success rates were less than 10 percent on 7 days during this period.

Testing The Effectiveness Of Pollution Control Measures At The South Dade Landfill: The Reduction Of Un-Ionized Ammonia In Landfill Leachate, Matt Mitchell

HCNSO Student Theses and Dissertations

The purpose of this research was to evaluate the overall effectiveness of the pollution control measures in place at the South Dade Landfill, located in Miami, Florida. Pollution control measures in place at the landfill include the lining and capping of landfill cells, a landfill wetland retention basin and a groundwater remediation interceptor trench (GWRIT). This study was performed over a ten (10) month span beginning in October, 2002 and ending in July, 2003. This study dealt specifically with the effectiveness of the GWRIT and landfill wetlands in reducing the amount of un-ionized ammonia (NH₃) in the landfill …

Spring 2006, Nsu Oceanographic Center

Currents

No abstract provided.

The Hillarys Transect (1): Seasonal And Coss-Shelf Variability Of Physical And Chemical Water Properties Off Perth, Western Australia, 1996-98, Alan F. Pearce, M J. Lynch, Christine E. Hanson

School of Natural Sciences Publications

A 27-month study of the water properties across the continental shelf off Perth, Western Australia (the "Hillarys Transect") has provided the first systematic inter-disciplinary climatology of the physical, chemical, optical and biological cycles across the shelf. This paper describes the main features of the seasonal and cross-shelf variability of the physical oceanography and chemistry, while companion papers discuss some of the links between the biology and physics of the region

Crop Updates 2006 - Katanning, David Stephens, Michael Meuleners, Meredith Fairbanks, Thomas Schulz, T. J. Flowers, T. D. Colmer, Narelle Simpson, Ron Mctaggart, Wal Anderson, Lionel Martin, Dave Allen, Brenda Shackley, Raj Malik, Kelly Winfield, Rodger Beermier, Shahahan Miyan, Abul Hashem, Shahab Pathan, Vikki Osten, Alex Douglas, Garren Knell, Steve Curtin, Wade Longmuir, Henry Brockman, Justin Hardy, Arjen Ryder, John Paul Collins, Jessica Johns, John Pepall, Allan Herbert

Crop Updates

This session covers sixteen papers from different authors

1. 2006 SEASONAL OUTLOOK, David Stephens and Michael Meuleners, Department of Agriculture

2. Review of climate model summaries reported in the Department of Agriculture’s growing season outlooks, Meredith Fairbanks, Department of Agriculture

3. Farmers commodity outlook 2006, Thomas Schulz, Department of Agriculture

4. Why is salinity such a difficult problem for plant breeders? T J Flowers, TD Colmer, University of Western Australia

5. Matching nitrogen supply to wheat demand in 2005, Narelle Simpson, Ron McTaggart, Wal Anderson, Lionel Martin and Dave Allen, Department of Agriculture

6. Wheat varieties in 2006, Brenda Shackley, …

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Crop Updates 2006 - Cadoux And Calingiri, Raj Malik, Kelly Winfield, David Stephens, Michael Meuleners, Kari-Lee Falconer, Bill Bowden, Narelle Simpson, Anne Wilkins, Nathan Hancock, Peter Newman, Glenn Adam, Andrew Blake, Caroline Peak, Stephen Davies, Chris Gazey, Bob Gilkes, Dan Evans, Tania Liaghati

Crop Updates

This session covers nine papers from different authors

1. Performance of oaten hay varieties in Western Australian environments, Raj Malik and Kellie Winfield, Department of Agriculture

2. Performance of dwarf potential milling varieties in Western Australian environments, Raj Malik and Kellie Winfield, Department of Agriculture

3. 2006 Seasonal outlook, David Stephens, Michael Meuleners and Kari-Lee Falconer, Department of Agriculture

4. Matching nitrogen supply to crop demand in high rainfall cropping, Bill Bowden, Narelle Simpson Department of Agriculture

5. An overview of the potential for a Biofuels Industry in Western Australia, Anne Wilkins and Nathan Hancock, Department of Agriculture

6. IWM performs over 5 years …

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Southeast Florida Coral Reef Evaluation And Monitoring Project 2005 Year 3 Final Report, Jennifer Wheaton, Carl Beaver, Walter Jaap, Michael Callahan, Selena Kupfner, Shannon Wade, David S. Gilliam, B. D. Ettinger, Daniel P. Fahy, Shaun M. Gill, Lindsey Habakuk Klink, Jamie A. Monty, M. A. Philips, Lauren F. Shuman, Nicole R. Stephens, Brian K. Walker, Joanna C. Walczak, Richard E. Dodge, Tim Mcintosh, Steven Blair, Kenneth Banks, Louis E. Fisher, David Stout, Joe Ligas, Janet Phipps

Marine & Environmental Sciences Faculty Reports

No abstract provided.

A Fish Habitat Classification Model For The Upper And Middle Sections Of The Bay Of Quinte, Lake Ontario, C. K. Minns, Andrea Bernard, C. N. Bakelaar, M. Ewaschuk

Marine & Environmental Sciences Faculty Reports

A fish habitat classification model was developed and applied to the upper and middle sections of the Bay of Quinte, Lake Ontario. Available habitat inventories were assembled in a GIS database, bringing bathymetric, shoreline, substrate, and vegetation data together in a series of layers. The classification model was developed in four steps. In the first step, the Defensible Methods (DM) model developed by Minns et al. (2000) was used to estimate suitability values in all habitat patches for a set of nine fish groups each with three life stages. The fish groups were formed from the assemblage of fish species …

Hydrographic Observations During The 2002 Ioc Contaminant Baseline Survey In The Western Pacific Ocean, C. I. Measures, Greg A. Cutter, W. M. Landing, R. T. Powell

OES Faculty Publications

The 2002 IOC Contaminant Baseline Survey in the western Pacific Ocean was the fourth in a series of cruises intended to establish the contemporary concentrations of trace elements and other materials in the major water masses of the ocean and to illuminate the pathways by which materials delivered to the surface ocean are incorporated in the subsurface waters. The expedition occupied 9 vertical profile stations encompassing the subtropical and subarctic gyre of the western North Pacific. In addition, underway surface water samples were collected during transits between the stations. This paper uses the temperature, salinity, nutrient, oxygen, and chlorophyll data …

[Review Of] Stable Isotopes And Biosphere–Atmosphere Interactions: Processes And Biological Controls, Mark S. Coyne

Plant and Soil Sciences Faculty Publications

No abstract provided.

Crop Updates 2006 - Farming Systems, Wayne Pluske, Bill Bowden, Craig Scanlan, Stephen Davies, Chris Gazey, Peter Tozer, Derk Bakker, Louise Barton, David Gatter, Renee Buck, Daniel Murphy, Christoph Hinz, Bill Porter, Meredith Fairbanks, Nicolyn Short, Ian Foster, James Fisher, Doug Abrecht, Mario D'Antuono, Tracey M. Gianatti, Paul Carmody, Frank D'Amden, Rick Llewellyn, Michael Burton, Caroline Peek, Nadine Eva, Chris Carter, Megan Abrahams, Andrew Blake, Paul Blackwell, Sylvian Pottier, Michael Robertson, Greg Lyle, Lisa Brennan, Tony J. Vyn, Simon Teakle, Peter Norris, Jeff Russell, James Fisher, Roy Murray-Prior, Deb Pritchard, Mike Collins, Greg Hamilton, Rob Hetherington, Andrew Van Burgel, Cliff Spann

Crop Updates

This session covers nineteen papers from different authors:

SOIL AND NUTRIENT MANAGEMENT

1. Inve$tigating fertili$er inve$tment, Wayne Pluske, Nutrient Management Systems

2. KASM, the potassium in Agricultural System Model,Bill Bowden and Craig Scanlan, DAWA Northam and UWA, School of Earth and Geographical Sciences

3. Long term productivity and economic benefits of subsurface acidity management from surface and subsurface liming, Stephen Davies, Chris Gazey and Peter Tozer, Department of Agriculture

4. Furrow and ridges to prevent waterlogging, Dr Derk Bakker, Department of Agriculture

5. Nitrous oxide emissions from a cropped soil in Western Australia, Louise Barton^{1 …}

Fractal Patterns Of Coral Communities: Evidence From Remote Sensing (Arabian Gulf, Dubai, U.A.E.), Samuel J. Purkis, Bernhard Riegl, Richard E. Dodge (Editor)

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

In this study, the spatial character of benthic communities is investigated in an Arabian Gulf shallow subtidal carbonate ramp setting, using IKONOS satellite imagery. The patchy distribution of three assemblages of live and dead corals on extensive (but also fragmented) hardground pavements was investigated using a variety of spatial statistics. It was found that the spatial expression of the benthic groups display characteristics that approximate to power-law distributions over several orders of magnitude to an extent that suggests fractal behaviour. Pronounced anisotropy was observed between the spatial patterns in the near-shore and off-shore region which is attributed to different mechanisms …

Application Of Paleoclimatology To Coral Reef Monitoring And Management, C. Mark Eakin, Peter K. Swart, Terrence M. Quinn, Kevin P. Helmle, Jennifer M. Smith, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The skeletons of reef-building corals are valuable archives of climatic and environmental information. Paleoclimatic data chiefly have been generated in areas most sensitive to global or regional climatic variability. However, these records also provide valuable information on anthropogenic influences – guidance of value to resource managers. NOAA’s Coral Reef Watch targets observations of current and past coral reef health in or near marine protected areas through satellites, in situ sensor platforms, and paleoclimatic analyses. Paleoclimatic data provide retrospective monitoring through multi-century environmental reconstructions that improve our understanding of past stress to coral reefs. Two sites in the Florida Keys National …

Facilitating The Development Of The Strawberry Industry In Western Australia, Dennis Phillips, Aileen Reid

Horticulture research reports

Horticulture Australia Project No. BS05001 Annual report 2005/06

This is the first of three annual reports for the Horticulture Australia project BS05001 — ‘Facilitating the development of the strawberry industry in Western Australia’. This project is managed by the Strawberry Growers Association of WA Inc. and the work is being done in collaboration with the Department of Agriculture and Food WA (DAFWA). The project has been funded by voluntary contributions from the W.A. Strawberry Producers Committee, Toolangi Strawberry Runner Growers Co-operative and DAFWA with matching funding from Horticulture Australia Ltd (HAL). The project has been funded for three years, 2005, …

Evaluation Of The Sustainable Grazing On Saline Lands - Wa Producer Network : Influence On Practice Change And Decision-Making Capacity, Rebecca Heath, Jamie Bowyer, T M. Lacey

Resource management technical reports

No abstract provided.

Growth And Survivorship Of Scleractinian Coral Transplants And The Effectiveness Of Plugging Core Holes In Transplant Donor Colonies, Elizabeth Glynn Fahy, Richard E. Dodge, Daniel P. Fahy, T. Patrick Quinn, David S. Gilliam, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Replicate scleractinian coral transplants were obtained from the species Meandrina meandrites and Montastrea cavernosa on a natural reef, off Dania Beach, Florida, using a hydraulic drill fitted with a 4 in. (~10 cm) core barrel. The transplants were fixed to Reef Ball™ substrates using an adhesive marine epoxy. Drill holes in the donor corals (core holes) were filled with concrete plugs. Control corals, of comparable size to both donor colonies and transplant corals, were monitored for comparison. Transplant corals, donor corals, and controls on the natural reef were monitored for growth and survivorship. Core holes were monitored for tissue regrowth …

Spatial Patterns In Arabian Gulf Coral Assemblages (Jebel Ali, Dubai, U.A.E.) In Response To Temperature-Forcing, Bernhard Riegl, Samuel J. Purkis, Kevin E. Kohler, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

We evaluated spatial and temporal patterns using maps from Ikonos satellite imagery in combination with 8 years of line transects and photosquares and the HadISST1 sea-surface temperature data set to explain why coral assemblages in the southern Arabian Gulf (Dubai) are impoverished and mostly do not build framework reefs. Analysis of archive sea surface temperature (SST) data confirms that the area is subjected to recurrent temperature anomalies. Frequencies of anomalies might suggest at least a partial link to the El Niño Southern Oscillation possibly via the Indian Ocean Zonal Mode. The dominant driver of local temperature was oscillations in the …

An Experimental Histopathological Rating Scale Of Sedimentation Stress In The Caribbean Coral Montastraea Cavernosa, Bernardo Vargas-Ángel, Bernhard Riegl, David S. Gilliam, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Colonies of Montastraea cavernosa were exposed to daily applications of approx. 200–225 mg cm– 2 sediments, during a four-week period, in order to investigate coral responses to increased sedimentation. Effects were assessed based on the histopathological condition of specimen tissues. Mild stress responses were noted as early as week one, including tissue swelling and polyp retraction, as well as changes in size and appearance of mucous secretory cells. As stress progressed, further inflammation of the mucous secretory cells was observed. Severe effects were observed in weeks 3 and 4, including atrophy of the outer epidermis, increased granularity and debris in …

Visual_Hea: Habitat Equivalency Analysis Software To Calculate Compensatory Restoration Following Natural Resource Injury, Kevin E. Kohler, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Habitat Equivalency Analysis (HEA) is a means to determine the amount of compensatory restoration required to provide services that are equivalent to the interim loss of natural resource services following an injury. HEA includes a discounting procedure to account for asset valuation in that the total asset value is equal to the discounted value of the future stream of all services from the natural resource or the compensatory resource. Discounting is used to include the relative valuation of loss and gain of ecological services of the resources over time. Visual_HEA is a computer program developed to calculate the amount of …

Coral Of Opportunity Survivorship And The Use Of Coral Nurseries In Coral Reef Restoration, Jamie A. Monty, David S. Gilliam, Kenneth Banks, David K. Stout, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Coral reef damage is unfortunately becoming a common occurrence off southeast Florida, U.S.A. Reattachment of the dislodged scleractinian corals usually initiates damage site restoration. Because mortality of dislodged colonies is typically high and natural recovery in southeast Florida is typically slow, transplantation of additional scleractinian corals into a damaged area has been used to accelerate reef recovery. Donor colonies available for transplantation have been grown in situ, grown in laboratories, and taken from nondamaged reef areas. An alternative source of donor colonies for transplantation into damaged sites is “corals of opportunity,” which we define as scleractinian corals that have been …

Implications Of Natural Variation Of Fish Assemblages To Coral Reef Management, Lance K. B. Jordan, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

In order to evaluate the impact of a planned beach renourishment project we obtained baseline data on hardbottom coral reef fish assemblages adjacent to the beach. During the summers of 2001 and 2003 we conducted 92 and 89 visual transect-counts, respectively, each 30x2x1m. Fish were recorded by species, abundance, and size class. Fish exhibited a 62.8% decrease in abundance between the 2001 and 2003 surveys. Juvenile Haemulon spp. (<5cm total length, TL) alone decreased 72.8% in abundance and, due to their predominance, primarily drove the decrease seen for total abundance. The second most abundant species Halichoeres bivittatus, also primarily juveniles (<5cm TL), contributed 8% of the total abundance and also showed a significant decrease between the 2001 and 2003 surveys. Even after removal of the two most abundant taxa, total abundance remained significantly lower the second survey year, suggesting the possibility of a community-wide decrease in abundance. However, the decrease between years was mainly due to a decrease in juveniles. When fish less than 5cm TL were removed from the dataset, no significant difference in abundance between years was detected. Species richness also declined significantly with fewer species noted in 2003 and eight fewer total species between years. Nonetheless, multivariate examination of assemblage structure did not indicate a difference between years. These results have important implications for determining potential anthropogenic change in fish assemblages (e.g. caused by beach renourishment).

Differential Expression Of Immune Response Genes In Steller Sea Lions (Eumetopias Jubatus): An Indicator Of Ecosystem Health?, Lizabeth Bowen, Brian Aldridge, Kimberlee Beckmen, Tom Gelatt, Lorrie Rea, Kathy Burek, Ken Pitcher, Jeffrey L. Stott

United States Department of Commerce: Staff Publications

Characterization of the polygenic and polymorphic features of the Steller sea lion major histocompatibility complex (MHC) provides an ideal window for evaluating immunologic vigor of the population and identifying emergence of new genotypes that reflect ecosystem pressures. MHC genotyping can be used to measure the potential immunologic vigor of a population. However, since ecosystem-induced changes to MHC genotype can be slow to emerge, measurement of differential expression of these genes can potentially provide real-time evidence of immunologic perturbations. MHC DRB genes were cloned and sequenced using peripheral blood mononuclear leukocytes derived from 10 Steller sea lions from southeast Alaska, Prince …

Natural Resource Management Issues In The Avon River Basin, Paul Galloway

Resource management technical reports

Analyses the risk of soil, land and water degradation within the Avon River Basin of Western Australia. Information is based on the interpretation of the characteristics of soils and landscapes within the Avon River basin. This report deals with 15 natural resource management issues and describes the extent of each issue, the impacts that each issue will have, management options that can be used to deal with each issue, and the effectiveness of each management option in dealing with the issues.

Sponges Of Navassa, Janie L. Wulff, Timothy D. Swain

Marine & Environmental Sciences Faculty Reports

This photographic guide was compiled from data collected during the 2004 NOAA survey of the coral reefs of Navassa and does not represent a comprehensive list of all Porifera in Navassa. Specifically missing are taxa that inhabit caves, overhangs, vertical walls; species that live in the interstices of the reef framework; and species found at depths greater than 50 meters. Specimens were identified by Janie Wulff and Timothy Swain of Florida State University using a combination of digital photography, field observations, and microscopic examination of siliceous spicules. Genera are organized into higher taxa according to Systema Porifera, Hooper & van …

Effects Associated With Dredging For Beach Renourishments On Reef Fish Communities Offshore Of Miami-Dade County, Florida:, Christian L. Avila

HCNSO Student Theses and Dissertations

Beach erosion is an ongoing problem in South Florida. Beach replenishment has been the primary means of maintaining these economically important beaches, and dredging offshore sand deposits, adjacent to reef tracts, has been the pervasive method since the 1970's. Over the past ten years, greater attention has been paid to potential impacts dredging can have on adjacent reef communities, which has led to increased monitoring efforts. With the increase in monitoring efforts, scope has expanded from a strict focus on the benthic community to include the fish communities. This study evaluates the effects of dredging on reef fish communities associated …

Sea Turtle Conservation Program, Broward County, Fl 2006 Report, Curtis M. Burney, Stefanie Ouellette

Marine & Environmental Sciences Faculty Reports

Since 1978, the Broward County Environmental Protection Department (BCEPD) has provided for the conservation of endangered and threatened sea turtle species within its area of responsibility. Broward County is within the normal nesting areas of three species of sea turtles: the loggerhead sea turtle (Caretta caretta), the green sea turtle (Chelonia mydas) and the leatherback sea turtle (Dermochelys coriacea). The loggerhead is listed as a threatened species, while the green and leatherback are listed as endangered under the U.S. Endangered Species Act, 1973, and Chapter 370, F.S.

Since these statutes strictly forbid any disturbance …

Spatial Analyses Of Trophic Linkages Between Basins In The Great Salt Lake, Wayne A. Wurtsbaugh, David Naftz, Shane Bradt

Watershed Sciences Faculty Publications

Although the Great Salt Lake is frequently treated as if it were a single body of water, the natural bays and transportation causeways have divided it into a system of four bays. The bays, however, do not function independently because water, nutrients and other contaminants flow between them. The purpose of our study was to analyze the water quality in three of the bays (Farmington, Bear River and Gilbert), to determine fluxes of nutrients between them, and to determine how this was influencing brine shrimp populations in the lake. Discharge and nutrient concentrations were measured at constrictions separating the three …

Aquatic Macroinvertebrates Of The Strawberry River System In North-Central Arkansas, George L. Harp, Henry W. Robison

Journal of the Arkansas Academy of Science

The Strav/berry River has been designated an Extraordinary Resource Water, an Ecologically Sensitive Water Body, and a Natural and Scenic Waterway. As such, it is particularly important that the biodiversity of this river system be documented thoroughly. The purpose of this research was to develop a comprehensive list of the aquatic macroinvertebrates of the Strawberry River and its major tributaries. The information was developed from a thorough literature review and by examining specimens housed in various collections of the Arkansas State University Museum of Zoology and collections of the authors. The latter included 9 collections at 4 sites along the …