Oceanography and Atmospheric Sciences and Meteorology Commons^™

Short-Term Toxicity Of 1-Methylnaphthalene To Americamysis Bahia And 5 Deep-Sea Crustaceans, Anthony H. Knap, Nicholas R. Turner, Gopal Bera, Dorothy-Ellen A. Renegar, Tamara Frank, Jose Sericano, Bernhard Riegl

Marine & Environmental Sciences Faculty Articles

There are few studies that have evaluated hydrocarbon toxicity to vertically migrating deep-sea micronekton. Crustaceans were collected alive using a 9-m² Tucker trawl with a thermally insulated cod end and returned to the laboratory in 10 °C seawater. Toxicity of the polycyclic aromatic hydrocarbon 1-methylnaphthalene to Americamysis bahia, Janicella spinacauda, Systellaspis debilis, Sergestes sp., Sergia sp., and a euphausiid species was assessed in a constant exposure toxicity test utilizing a novel passive dosing toxicity testing protocol. The endpoint of the median lethal concentration tests was mortality, and the results revealed high sensitivity of the deep-sea micronekton …

Is The State Of The Air-Sea Interface A Factor In Rapid Intensification And Rapid Decline Of Tropical Cyclones?, Alexander Soloviev, Roger Lukas, Mark A. Donelan, Brian K. Haus, Isaac Ginis

Marine & Environmental Sciences Faculty Articles

Tropical storm intensity prediction remains a challenge in tropical meteorology. Some tropical storms undergo dramatic rapid intensification and rapid decline. Hurricane researchers have considered particular ambient environmental conditions including the ocean thermal and salinity structure and internal vortex dynamics (e.g., eyewall replacement cycle, hot towers) as factors creating favorable conditions for rapid intensification. At this point, however, it is not exactly known to what extent the state of the sea surface controls tropical cyclone dynamics. Theoretical considerations, laboratory experiments, and numerical simulations suggest that the air-sea interface under tropical cyclones is subject to the Kelvin-Helmholtz type instability. Ejection of large …

Effects Of Ocean Warming And Acidification On Fertilization Success And Early Larval Development In The Green Sea Urchin, Lytechinus Variegatus, Brittney L. Lenz

HCNSO Student Theses and Dissertations

Climate change is predicted to affect the larval stages of many marine organisms. Ocean warming can reduce larval survival and hasten larval development, whereas ocean acidification can delay larval development. Ocean acidification is especially concerning for marine organisms that develop and grow calcified shells or skeletons in an environment undersaturated with calcium carbonate minerals. This study assessed the effects of ocean warming and acidification on the fertilization and larval development of the green sea urchin, Lytechinus variegatus, a tropical species common in Florida and the Caribbean. After spawning, gametes were fertilized and embryos/larvae were reared at: 1) 28°C and …

Variation In Coral Recruitment And Juvenile Distribution Along The Southeast Florida Reef Tract, Leah M. Harper

HCNSO Student Theses and Dissertations

Coral recruitment in Southeast Florida is being outpaced by mortality, resulting in population declines in many species. Identifying the coral species most likely to recruit and survive on Southeast Florida reefs and evaluating spatial variation in recruitment and survivorship is crucial for managing decreasing coral populations. This study focuses on 12 sites in Broward and Miami-Dade counties that have served as long-term stations for monitoring adult coral cover and demographics. At each site, thirty-two 225cm² grooved terracotta settlement tiles were attached to the substrate in winter of 2015 and retrieved in winter of 2016 to evaluate scleractinian and octocoral …

Habitat Ecology, Trophic Interactions, And Distribution Of Endangered Himalayan Musk Deer In The Nepal Himalaya, Kapil Kishor Khadka

Graduate Theses and Dissertations

This dissertation seeks to explore and assess the habitat selection, trophic interactions and distribution of Himalayan musk deer. Chapter one deals with seasonal diet analysis of musk deer along with the overlap in consumption with livestock during summer. Microhistological technique was employed to assess dietary consumption. Results showed that Abies spectabilis, Pinus wallichiana, and Berberis species constituted the major portion of musk deer’s diet. Dietary breadth measured by the Shannon index was found higher in winter compared to summer. Although musk deer and livestock shared a considerable number of plant species in their diets, the consumption however was significantly different …

Distributions Of Krill And Antarctic Silverfish And Correlations With Environmental Variables In The Western Ross Sea, Antarctica, L. Brynn Davis, Eileen E. Hofmann, John M. Klinck, Andrea Piñones, Michael S. Dinniman

CCPO Publications

Antarctic krill Euphausia superba, crystal krill E. crystallorophias, and Antarctic silverfish Pleuragramma antarctica are key mid-trophic level species in the Ross Sea, connecting primary production to the upper trophic levels. Distributions of these species were constructed from observations made in the western Ross Sea from 1988 to 2004. Distributions of environmental conditions were obtained from a 5-km resolution circulation model (temperature, mixed layer depth, surface speed) and satellite-derived observations (chlorophyll, sea ice cover). A hierarchy of statistical methods determined correlations and relationships between species and environmental conditions. Each species occupies a localized habitat defined by different environmental characteristics. …

Ecological And Oceanographic Influences On Leatherback Turtle Behavior And Scyphozoan Jellyfish Distributions In The Gulf Of Mexico, Katrina Aleksa

Dissertations

Leatherback turtles (Dermochelys coriacea) are a wide-ranging, oceanic species that feed exclusively on gelatinous zooplankton. Leatherback have been spotted in the Gulf of Mexico (GoM) for several decades and consistently had a high level of interactions with longline fisheries. However, no quantitative studies have been performed to address the spatiotemporal distribution of these turtles in the GoM. This research determines 1) leatherback movements and high-use areas in the GoM, 2) their association with oceanographic features, 3) the distribution and density of two abundant medusae in the northern GoM and any association with biophysical parameters, and 4) the body …

Non-Methane Hydrocarbon Source Apportionment And Btex Risk Assessment Of Winter 2015 In Roosevelt, Utah, Jerimiah Lamb

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Non-Methane Hydrocarbons (NMHC) monitored in Roosevelt Utah including Benzene, Toluene, Ethylbenzene and Xylene (collectively known as BTEX) are associated with deleterious effects including cancer. This study was designed to assess the origin and effect of the toxicants and addressed two points: 1) Source identification using the USEPA’s Positive Matrix Factorization (PMF) and NOAA’s Hybrid Single Particle Lagrangian Integrated Trajectory (HYSPLIT) model and 2) A human health risk assessment based on ambient concentrations of BTEX collected at the Roosevelt site. Model fit indicated that the primary contributor to total NMHCs was local oil and gas operations and was supported by previous …

Reef Fish Assemblage Biogeography Along The Florida Reef Tract, Cory Ames

HCNSO Student Theses and Dissertations

Understanding the biogeography of reef fish assemblages is paramount to reef conservation, management, and conducting appropriate population survey designs. Reef fish assemblages are a multispecies complex of reef-associated fish and are shaped by multiple environmental and biological factors (e.g. temperature, depth, benthic habitat, and topographic relief), which determine the species constituents residing in an area. Assemblages typically change with latitude where the number of families, genera, and/or densities of species specific to warmer climates decrease poleward into colder climate regimes. The Florida Reef Tract (FRT) extends for 595 km from the Dry Tortugas in the south-west to Martin County in …

Frontline Experiences From Changing Fisheries Bycatch Paradigms, David Kerstetter

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

No Evidence For Trace Metal Limitation On Anaerobic Carbon Mineralization In Three Peatland Soils, Jason K. Keller, Jillian Wade

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Peatlands store roughly one-third of the terrestrial soil carbon and release the potent greenhouse gas methane (CH₄) to the atmosphere, making these wetlands among the most important ecosystems in the global carbon cycle. Despite their importance, the controls of anaerobic decomposition of organic matter to carbon dioxide (CO₂) and CH₄ within peatlands are not well understood. It is known, however, that the enzymes responsible for CH₄ production require cobalt, iron and nickel, and there is a growing appreciation for the potential role of trace metal limitation in anaerobic decomposition. To explore the possibility of …

"The Effects Of Ocean Warming And Sedimentation On The Survival And Growth Of Acropora Cervicornis" And "Differential Prevalence Of Chimerism During Embryogenesis In Corals", Hayley De Marchis

HCNSO Student Theses and Dissertations

Part I:

Coral reefs are essential to coastal economies, protecting coastlines from storms, and harboring high biodiversity. However, reefs are declining due to local anthropogenic stressors and ocean warming. Sedimentation, a local stressor, aggravates the impacts of warming on corals and hinders their survival and growth. Therefore, it is important to investigate whether sedimentation and temperature have a synergistic effect on vulnerable coral species, especially during earlier stages of development. To quantify these effects, survival and growth of newly settled Acropora cervicornis corals were measured at two temperatures (29 and 31°C, representing current and predicted for 2050 Summer temperatures) and …

Evaluating The Ecological Status Of The Introduced Nile Monitor (Varanus Niloticus) In Florida: Forecasting Presence And Population Expansion Using Computational Geographic Information Systems, Noah G. Cohen

HCNSO Student Theses and Dissertations

The Nile monitor (Varanus niloticus) is a large, carnivorous lizard that has become a notorious invasive species in Florida, USA. Initially released in the 1980s from the pet trade, the species has since established at least three breeding populations and spread throughout much of southern Florida. While current control efforts have failed to eradicate V. niloticus, it is important to attain a better understanding of its invasive dynamics to guide and inform better control strategies. In this study, available georeferenced records of V. niloticus in Florida were compiled and linked to a habitat classification map to evaluate ecotype preferences. Factored …

Microbial And Genomic Analysis Of Environmental Samples In Search Of Pathogenic Salmonella, Jorie L. Skutas

HCNSO Student Theses and Dissertations

Salmonellosis or “food poisoning” is a foodborne infection brought on by the pathogen Salmonella from the ingestion of the bacterium on contaminated foods such as vegetables. Infection from Salmonella leads to the highest incidence of hospitalizations and deaths each year, compared to any other bacterial foodborne illness. South Florida is the second largest agricultural winter vegetable producer in the United States, and contamination of vegetables is often observed in preharvest practices. A hardy bacterium, Salmonella, has been shown to live up to 6 weeks in soil and water up to 42°C without a host.

The Florida Everglades is a tropical …

Packaging Of Genetic Material By Gene Transfer Agents (Gtas) Produced By Marine Roseobacter Species And Their Effect On Stimulating Bacterial Growth, Shahd Bader Aljandal

USF Tampa Graduate Theses and Dissertations

Horizontal gene transfer is one of the most important mechanisms for prokaryotic genome innovation and evolution. Gene Transfer Agents (GTAs) are phage-like particles that package small fragments of the genome of a GTA-producing bacterial cell. GTA chromosomal gene clusters usually contain 15-conserved open reading frames (ORFs) and are present in most of the sequenced marine alpha-proteobacteria genomes. Some marine strains have been shown to produce GTA particles that were biologically active in marine environment.

GTA particles range in size, morphology and the amount of host DNA they package. To date, the characteristics of GTAs are largely based on observations of …

Reef Fish Biodiversity In The Florida Keys National Marine Sanctuary, Megan E. Hepner

USF Tampa Graduate Theses and Dissertations

The biological diversity of reef-fish in the Florida Keys National Marine Sanctuary (FKNMS) from 1999 – 2016 was evaluated in terms of abundance, biomass, species richness, evenness, Shannon diversity, Simpson diversity, and functional diversity, using observations collected by multiple agencies and institutions under the Reef Visual Census (RVC) program. To compare the different diversity indices species richness, Shannon diversity, Simpson diversity, and functional diversity were converted into effective number of species. I examined the seven indices by no-take marine zones, in seven benthic habitat strata, and across the three-distinct geographic subregions in the Florida Keys domain (Upper, Middle, and Lower …

Emerging Hotspot Analysis Of Florida Manatee (Trichechus Manatus Latirostris) Mortality (1974-2012), Crystal Ann Bass

HCNSO Student Theses and Dissertations

The Florida manatee (Trichechus manatus latirostris) is a protected species that is vulnerable to both anthropogenic and natural causes of mortality. The ability of wildlife managers to oversee regulation of this species is based on available abundance estimates and mortality data. Using existing manatee mortality data collected by Florida Fish and Wildlife Conservation Commission (FWC) from 1974-2012, this study focuses on identifying significant spatial clusters of high values or “hotspots” of manatee mortality and the temporal patterns of these hotspots using the novel “emerging hotspot analysis” ArcGIS tool. The categories of manatee mortality included in this analysis were …

Dietary Transfer Of Heavy Metals In Manatees, E. M. Smith, Dimitri Giarikos, A. Daniels, Amy Hirons

Chemistry and Physics Faculty Proceedings, Presentations, Speeches, Lectures

In recent decades, manatees and dugongs globally have exhibited potentially detrimental levels of a variety of heavy metals in their body tissues. The threatened Florida manatee (Trichechus manatus latirostris), which is a subspecies of the West Indian manatee (Trichechus manatus), has shown corresponding high levels of heavy metals in their blood, skin, liver, and kidneys. As obligate herbivores, these animals rely heavily upon seagrasses as a major component of their diet. Globally, seagrasses at low latitudes have high levels of heavy metals in their tissues. Detrimental levels of heavy metals in Sirenians have not been established …

North Pacific Marine Mammals Populations Rocked By Heavy Metal Concentrations, Pilar Ferdinando, Chitra Gotluru, Tanya Juneja, Kevin Cash, Karanja Sekou, Emily Pope, L. K. Duffy, Dimitri Giarikos, Amy Hirons

Chemistry and Physics Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

A Comparison Of The Rate Of Oxygen Store Development In Phocid Sealsq, Rachael Stevenson, Tamara Frank, Amy Hirons

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

Peruvian Pinnipeds As Archivist Of Enso Effects Off The Coast Of Peru, Mickie Edwards, Michael Adkesson, Susana Cardenas-Alayza, Amy Hirons

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

Shift In Icelandic Plant Populations Due To Climate Change: Through The Lens Of Natural Dyes, Molly Pluenneke

Independent Study Project (ISP) Collection

Northern residing plant species are at the highest risk for extinction due to temperature rise related to climate change (Schöb, Manuel, Choler & Veit, 2009). Climate change has also led to a northern shift in the geographic distribution of plant species (Parmesan & Yohe, 2003). This could lead to a necessary alteration in the way natural resources are utilized in arctic countries like Iceland (Lim-Camacho et al, 2017). The purpose of this study is to analyze the way in which Icelandic plant species used in natural dye practices may shift in distribution due to climate change and the potential impact …

Counting Crabs: Assessment Of Mangrove Crab Diversity And Density Among Three Sites In Ushongo, Tanzania, Clarasophia Gust

Independent Study Project (ISP) Collection

This study assessed the density and diversity of crabs across three mangrove forest zones in Ushongo, Tanzania. The aim was to understand variance in the composition and distribution of mangrove crabs in relation to mangrove tree composition gradients in the area. Sites were measured using a 200m line transect and 40-plot method. Data was also collected from a sand beach habitat to compare to the diversity and distribution of mangrove habitats. Diversity was analyzed using Simpson’s Index of Diversity and an ANOVA test on the average number of species found per plot in each site. Density was analyzed using an …

The Sponge Microbiome Project, Lucas Moitinho-Silva, Shaun Nielsen, Amnon Amir, Antonio Gonzalez, Gail Ackermann, Carlo Cerrano, Carmen Astudillo-Garcia, Cole Easson, Detmer Sipkema, Fang Liu, Georg Steinert, Giorgos Kotoulas, Grace Mccormack, Guofang Feng, James J. Bell, Jan Vicente, Johannes R. Bjork, Jose M. Montoya, Julie B. Olson, Julie Reveillaud, Laura Steindler, Mari-Carmen Pineda, Maria V. Marra, Micha Ilan, Michael W. Taylor, Paraskevi Polymenakou, Patrick M. Erwin, Peter J. Schupp, Rachel L. Simister, Rob Knight, Robert W. Thacker, Rodrigo Costa, Russell T. Hill, Susanna Lopez-Legentil, Thanos Dailianis, Timothy Ravasi, Ute Hentschel, Zhiyong Li, Nicole S. Webster, Torsten Thomas

Marine & Environmental Sciences Faculty Articles

Marine sponges (phylum Porifera) are a diverse, phylogenetically deep-branching clade known for forming intimate partnerships with complex communities of microorganisms. To date, 16S rRNA gene sequencing studies have largely utilised different extraction and amplification methodologies to target the microbial communities of a limited number of sponge species, severely limiting comparative analyses of sponge microbial diversity and structure. Here, we provide an extensive and standardised dataset that will facilitate sponge microbiome comparisons across large spatial, temporal, and environmental scales. Samples from marine sponges (n = 3569 specimens), seawater (n = 370), marine sediments (n = 65) and other …

Do Advisors Perceive Climate Change As An Agricultural Risk? An In-Depth Examination Of Midwestern U.S. Ag Advisors’ Views On Drought, Climate Change, And Risk Management, Sarah P. Church, Michael Dunn, Nicholas Babin, Amber Saylor Mase, Tonya Haigh, Linda Stalker Prokopy

National Drought Mitigation Center: Faculty Publications

Through the lens of the Health Belief Model and Protection Motivation Theory, we analyzed interviews of 36 agricultural advisors in Indiana and Nebraska to understand their appraisals of climate change risk, related decision making processes and subsequent risk management advice to producers. Most advisors interviewed accept that weather events are a risk for US Midwestern agriculture; however, they are more concerned about tangible threats such as crop prices. There is not much concern about climate change among agricultural advisors. Management practices that could help producers adapt to climate change were more likely to be recommended by conservation and Extension advisors, …

Bacteria Mitigation In Sponge Mariculture, Jambiani Zanzibar, Claire Johnston

Independent Study Project (ISP) Collection

The declining seaweed industry coupled with efforts by the NGO Marine Cultures have led to the establishment of sponge mariculture in Jambiani, Zanzibar. However, growing cyanobacteria levels have substantially increased sponge mortality rates. In order to determine successful cyanobacteria mitigation treatments, six populations of farm ropes, support lines, and sponges were (a) untreated, (b) manually cleaned or submerged in solutions of (c) 2% hydrogen peroxide, (d) 4% hydrogen peroxide, (e) 50 g/L salt, or (f) 70 g/L salt. No conclusions were drawn from rope treatments, no techniques were effective for support line treatments, and both concentrations of hydrogen peroxide were …

Agricultural Responses To Climate Change: A Study Of Adaptive Farming Methods In Kizanda Village, Bailey Smith-Helman

Independent Study Project (ISP) Collection

Agriculture is vital to the economic and social systems in Tanzania, composing 30% of the country’s GDP as well as 80% of employment (FAO, 2014). Despite agriculture’s important role, it remains one of the most vulnerable sectors to climate change. Current trends project global average temperature to increase by 0.8-2.6 degrees Celsius, leaving farmers to face changes in rainfall, soil quality, and new pests and diseases (IPCC, 2007). Farmers will be forced to adapt to the changing climate if they are to sustain their livelihoods and the Tanzanian economy. For these reasons, it is important to understand the types of …

You, Me And Life In The Sea Ocg 106g, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Additive Negative Effects Of Anthropogenic Sedimentation And Warming On The Survival Of Coral Recruits, Francesca Fourney, Joana Figueiredo

Marine & Environmental Sciences Faculty Articles

Corals worldwide are facing population declines due to global climate change and local anthropogenic impacts. Global climate change effects are hard to tackle but recent studies show that some coral species can better handle climate change stress when provided with additional energy resources. The local stressor that most undermines energy acquisition is sedimentation because it impedes coral heterotrophic feeding and their ability to photosynthesize. To investigate if reducing local sedimentation will enable corals to better endure ocean warming, we quantitatively assessed the combined effects of increased temperature and sedimentation (concentration and turbidity) on the survival of coral recruits of the …

Role Of Viruses Within Metaorganisms: Ciona Intestinalis As A Model System, Brittany A. Leigh

USF Tampa Graduate Theses and Dissertations

Marine animals live and thrive in a literal sea of microorganisms, yet are often able to maintain specific associations that are largely dictated by the environment, host immunity and microbial interactions. Animal-associated microbiomes include bacteria and viruses that vastly outnumber host cells, especially in the gut environment, and are considered to be integral parts of healthy, functioning animals that act as a metaorganism. However, the processes underlying the initial establishment of these microbial communities are not very well understood. This dissertation focuses on the establishment of a well-known developmental animal model, Ciona intestinalis (sea squirt), to study the establishment and …