Oceanography and Atmospheric Sciences and Meteorology Commons^™

Assessing Delta Oxygen-18 In The Coral Genus Isopora For Reconstructing Indo-Pacific Regional And Seasonal Climate, Gavin Lemley

Legacy Theses & Dissertations (2009 - 2024)

Paleoclimate reconstructions often utilize coral reefs with very long time spans such as the genus Porites and Diploastrea, because of their potential to provide centuries of continuous climate records via geochemical signatures. Smaller corals, such as the genus Isopora, have been essentially unexplored as climate archives because their small skeletons (<1 m) and short lifespans (years to decades) do not provide such continuous geochemical records. There has not been a practical application for such corals until recently. In early 2010, the Integrated Ocean Drilling Program Leg 325 (IODP-325) cored drowned fossil reefs off the Great Barrier Reef (GBR) with the objectives of reconstructing sea level and surface ocean conditions since the Last Glacial Maximum. Out of 213 massive fossil corals that were recovered, most were massive Isoporan colonies. A 30-specimen subset of these fossils range in age from ~32,000 to ~11,500 years before present with even temporal spacing, based on preliminary U/Th dating of core catcher samples. This age distribution is excellent for meeting IODP-325 objectives, but the suitability of Isopora for paleoclimate analyses remains unknown.

Assessing The Reproducibility Of Coral Oxygen And Carbon Isotope Time Series From Fiji And Tonga And Their Application To The Reconstruction Of South Pacific Convergence Zone Movements Since The Mid-1800s, Emilie Pauline Dassie

Legacy Theses & Dissertations (2009 - 2024)

A major feature affecting the hydrology of the southern hemisphere is the South Pacific Convergence Zone (SPCZ); a band of high rainfall extending southeastward from the Western Pacific Warm Pool (WPWP). It is a key source of atmospheric water vapor and latent heating. While it is clear that the SPCZ plays a fundamental role in Earth's climate, little is known about the patterns and mechanisms responsible for interannual to century-scale changes in its position and how it may respond to global climate change.

The Global Drought Monitor Portal: The Foundation For A Global Drought Information System, Richard R. Heim Jr., Michael J. Brewer

United States Department of Commerce: Staff Publications

The international scientific community has long recognized the need for coordinated drought monitoring and response, but many factors have prevented progress in the development of a Global Drought Early Warning System (GDEWS): some of which involve administrative issues (coordinated international action and policy) while others involve scientific, technological, and logistical issues. The creation of the National Integrated Drought Information System (NIDIS) Portal within the United States provided an opportunity to take the first steps toward building the informational foundation for a GDEWS: that is, a Global Drought Information System (GDIS). At a series of workshops sponsored by the World Meteorological …

Copper Pellets Simulating Oral Exposure To Copper Ammunition: Absence Of Toxicity In American Kestrels (Falco Sparverius), J. Christian Franson, Lesanna L. Lahner, Carol U. Meteyer, Barnett A. Rattner

United States Geological Survey: Staff Publications

To evaluate the potential toxicity of copper

(Cu) in raptors that may consume Cu bullets, shotgun

pellets containing Cu, or Cu fragments as they feed on

wildlife carcasses, we studied the effects of metallic Cu

exposure in a surrogate, the American kestrel (Falco

sparverius). Sixteen kestrels were orally administered

5 mg Cu/g body mass in the form of Cu pellets

(1.18–2.00 mm in diameter) nine times during 38 days and

10 controls were sham gavaged on the same schedule. With

one exception, all birds retained the pellets for at least 1 h,

but most (69%) regurgitated pellets during …

Mapping Recent Decadal Climate Variations In Precipitation And Temperature Across Eastern Africa And The Sahel, Christopher Funk, Joel Michaelsen, Michael T. Marshall

United States Geological Survey: Staff Publications

This chapter presents a novel interpolation approach that combines long-term mean satellite observations, station data, and topographic fields to produce grids of climate normals and trends. The approach was developed by the Climate Hazard Group (CHG) at the University of California, Santa Barbara (UCSB), to support food security analyses for the U.S. Agency for International Development’s (USAID) Famine Early Warning Systems Network (FEWS NET). The resulting FEWS NET Climatology (FCLIM) combines moving window regressions (MWRs) with geostatistical interpolation (kriging). Satellite and topographic fields often exhibit strong local correlations with in situ measurements of air temperature and rainfall. The FCLIM method …

Altitude, Age, And Quality Of Groundwater, Papio-Missouri River Natural Resources District, Eastern Nebraska, 1992 To 2009, Virginia L. Mcguire, Derek W. Ryter, Amanda T. Flynn

United States Geological Survey: Water Reports and Publications

The United States Geological Survey (USGS), in cooperation with the Papio-Missouri River Natural Resources District (PMRNRD), conducted this study to map the water-level altitude of 2009 within the Elkhorn River Valley, Missouri River Valley, and Platte River Valley alluvial aquifers; to present the predevelopment potentiometric-surface altitude within the Dakota aquifer; and to describe the age and quality of groundwater in the five principal aquifers of the PMRNRD in eastern Nebraska using data collected from 1992 to 2009. In addition, implications of alternatives to the current PMRNRD groundwater-quality monitoring approach are discussed.

In the PMRNRD, groundwater altitude, relative to National Geodetic …

Toward A Framework For Systematic Error Modeling Of Spaceborne Precipitation Radar With Noaa/Nssl Ground Radar Based National Mosaic Qpe, Pierre-Emmanuel Kirstetter, Y. Hong, J. J. Gourley, S. Chen, Z. Flamig, J. Zhang, M. Schwaller, W. Peterson, Eyal Amitai

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Characterization of the error associated with satellite rainfall estimates is a necessary component of deterministic and probabilistic frameworks involving spaceborne passive and active microwave measurements for applications ranging from water budget studies to forecasting natural hazards related to extreme rainfall events. The authors focus here on the error structure of NASA's Tropical Rainfall Measurement Mission (TRMM) Precipitation Radar (PR) quantitative precipitation estimation (QPE) at ground. The problem is addressed by comparison of PR QPEs with reference values derived from ground-based measurements using NOAA/NSSL ground radar based National Mosaic and QPE system (NMQ/Q2). A preliminary investigation of this subject has been …

Could Satellite Altimetry Have Improved Early Detection And Warning Of The 2011 Tohoku Tsunami?, B. D. Hamlington, R. R. Leben, O. A. Godin, E. Gica, V. V. Titov, B. J. Haines, S. D. Desai

CCPO Publications

The 2011 Tohoku tsunami devastated Japan and affected coastal populations all around the Pacific Ocean. Accurate early warning of an impending tsunami requires the detection of the tsunami in the open ocean. While the lead-time was not sufficient for use in warning coastal populations in Japan, satellite altimetry observations of the tsunami could have been used to improve predictions and warnings for other affected areas. By comparing to both model results and historical satellite altimeter data, we use near-real-time satellite altimeter measurements to demonstrate the potential for detecting the 2011 Tohoku tsunami within a few hours of the tsunami being …

Process-Evaluation Of Tropospheric Humidity Simulated By General Circulation Models Using Water Vapor Isotopologues: 1. Comparison Between Models And Observations, Camille Risi, David Noone, John Worden, Christian Frankenberg, Gabriele Stiller, Michael Kiefer, Bernd Funke, Kaley Walker, Peter Bernath, Matthias Schneider, Debra Wunch, Vanessa Sherlock, Nicholas Deutscher, David Griffith, Paul O. Wennberg, Kimberly Strong, Dan Smale, Emmanuel Mahieu, Sabine Barthlott, Frank Hase, Omaira García, Justus Notholt, Thorsten Warneke, Geoffrey Toon, David Sayres, Sandrine Bony, Jeonghoon Lee, Derek Brown, Ryu Uemura, Christophe Sturm

Chemistry & Biochemistry Faculty Publications

The goal of this study is to determine how H₂O and HDO measurements in water vapor can be used to detect and diagnose biases in the representation of processes controlling tropospheric humidity in atmospheric general circulation models (GCMs). We analyze a large number of isotopic data sets (four satellite, sixteen ground-based remote-sensing, five surface in situ and three aircraft data sets) that are sensitive to different altitudes throughout the free troposphere. Despite significant differences between data sets, we identify some observed HDO/H₂O characteristics that are robust across data sets and that can be used to evaluate …

Atmospheric Effects Of Energetic Particle Precipitation In The Arctic Winter 1978-1979 Revisted, L. A. Holt, C. E. Randall, V. L. Harvey, E. E. Remsberg, G. P. Stiller, B. Funke, P. F. Bernath, K. A. Walker

Chemistry & Biochemistry Faculty Publications

[1] The Limb Infrared Monitor of the Stratosphere (LIMS) measured polar stratospheric enhancements of NO₂ mixing ratios due to energetic particle precipitation (EPP) in the Arctic winter of 1978–1979. Recently reprocessed LIMS data are compared to more recent measurements from the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) and the Atmospheric Chemistry Experiment Fourier transform spectrometer (ACE-FTS) to place the LIMS measurements in the context of current observations. The amount of NO_x (NO + NO₂) entering the stratosphere that has been created by EPP in the mesosphere and lower thermosphere (EPP-NO_x) has been quantified …

Standardized Precipitation Index: User Guide, Mark Svoboda, Michael Hayes, Deborah Wood

National Drought Mitigation Center: Faculty Publications

Over the years, there has been much discussion on what drought indices should be used in a particular climate and for what application. Many drought definitions and indices have been developed and attempts have been made to provide some guidance on this issue. With this in mind, the Interregional Workshop on Indices and Early Warning Systems for Drought was organized and held at the University of Nebraska-Lincoln, United States of America, from 8 to 11 December 2009. It was jointly sponsored by the School of Natural Resources (SNR) of the University of Nebraska, the United States National Drought Mitigation Center …

Implications Of Decade Time Scale Arctic Plant Community Change On Ecosystem Function, Mark Jason Lara

Open Access Theses & Dissertations

Almost half the global soil organic carbon pool is found in northern high latitudes. The majority of this soil carbon is stored in a greenhouse inert state within permafrost. As pronounced warming of high northern latitudes ensues, there is a strong likelihood that this substantial soil organic carbon pool will be mobilized to the atmosphere where it is likely to positively enhance greenhouse warming. Modeling studies suggest this positive feedback could alter future climate states of the Arctic and the globe, and affect how humans may need to adapt to climate change. Accordingly, understanding the patterns and controls and the …

Net Ecosystem Production (Nep) Of The Great Plains, United States, Daniel Howard, Tagir Gilmanov, Yingxin Gu, Bruce Wylie, Li Zhang

Natural Resource Management Faculty Publications

Gross primary production (GPP) and ecosystem respiration (Re) are the fundamental environmental characteristics that promote carbon exchanges with the atmosphere (Chapin and others, 2009), although other exchanges of carbon, such as direct oxidation (Lovett and others, 2006), can modify net ecosystem production (NEP). The accumulation of carbon in terrestrial ecosystems results in systems in which soil organic matter (SOM) carbon often exceeds biomass carbon (Post and Kwon, 2000). This SOM pool exists at a steady state between GPP and Re in ecosystems unless drivers change or the ecosystem endures environmental perturbations (for example, climatic). As indicated by Wilhelm and others …

Process-Evaluation Of Tropospheric Humidity Simulated By General Circulation Models Using Water Vapor Isotopic Observations: 2. Using Isotopic Diagnostics To Understand The Mid And Upper Tropospheric Moist Bias In The Tropics And Subtropics, Camille Risi, David Noone, John Worden, Christian Frankenberg, Gabriele Stiller, Michael Kiefer, Bernd Funke, Kaley Walker, Peter Bernath, Matthias Schneider, Sandrine Bony, Jeonghoon Lee, Derek Brown, Christophe Sturm

Chemistry & Biochemistry Faculty Publications

Evaluating the representation of processes controlling tropical and subtropical tropospheric relative humidity (RH) in atmospheric general circulation models (GCMs) is crucial to assess the credibility of predicted climate changes. GCMs have long exhibited a moist bias in the tropical and subtropical mid and upper troposphere, which could be due to the mis-representation of cloud processes or of the large-scale circulation, or to excessive diffusion during water vapor transport. The goal of this study is to use observations of the water vapor isotopic ratio to understand the cause of this bias. We compare the three-dimensional distribution of the water vapor isotopic …

Gene Transcription In Sea Otters (Enhydra Lutris); Development Of A Diagnostic Tool For Sea Otter And Ecosystem Health, Lizabeth Bowen, A. Keith Miles, Michael Murray, Martin Haulena, Judy Tuttle, William Van Bonn, Lance Adams, James L. Bodkin, Brenda Ballachey, James A. Estes, M. Tim Tinker, Robin Keister, Jeffrey L. Stott

United States Geological Survey: Staff Publications

Gene transcription analysis for diagnosing or monitoring wildlife health requires the ability to distinguish pathophysiological change from natural variation. Herein, we describe methodology for the development of quantitative real-time polymerase chain reaction (qPCR) assays to measure differential transcript levels of multiple immune function genes in the sea otter (Enhydra lutris); sea otter-specific qPCR primer sequences for the genes of interest are defined. We establish a ‘reference’ range of transcripts for each gene in a group of clinically healthy captive and free-ranging sea otters. The 10 genes of interest represent multiple physiological systems that play a role in immuno-modulation, …

Do Bioclimate Variables Improve Performance Of Climate Envelope Models?, James I. Watling, Stephanie S. Romanach, David N. Bucklin, Carolina Speroterra, Laura A. Brandt, Leonard G. Pearlstine, Frank J. Mazzotti

United States Geological Survey: Staff Publications

Climate envelope models are widely used to forecast potential effects of climate change on species distributions. A key issue in climate envelope modeling is the selection of predictor variables that most directly influence species. To determine whether model performance and spatial predictions were related to the selection of predictor variables, we compared models using bioclimate variables with models constructed from monthly climate data for twelve terrestrial vertebrate species in the southeastern USA using two different algorithms (random forests or generalized linear models), and two model selection techniques (using uncorrelated predictors or a subset of user-defined biologically relevant predictor variables). There …

Global Air Temperature Variability Independent Of Sea-Surface Temperature Influences, Andrew C. Comrie, Gregory J. Mccabe

United States Geological Survey: Staff Publications

Mean global surface air temperature (SAT) and sea surface temperature (SST) display substantial variability on timescales ranging from annual to multi-decadal. We review the key recent literature on connections between global SAT and SST variability. Although individual ocean influences on SAT have been recognized, the combined contributions of worldwide SST variability on the global SAT signal have not been clearly identified in observed data.Weanalyze these relations using principal components of detrended SST, and find that removing the underlying combined annual, decadal, and multi-decadal SST variability from the SAT time series reveals a nearly monotonic global warming trend in SAT since …

Gonadal Abnormalities In Frogs (Lithobates Spp.) Collected From Managed Wetlands In An Agricultural Region Of Nebraska, Usa, Diana M. Papoulias, Matt S. Schwarz, Lourdes Mena

United States Geological Survey: Staff Publications

Nebraska’s Rainwater Basin (RWB) provides important wetland habitat for North American migratory birds. Concern exists that pesticide and nutrient runoff from surrounding row-crops enters wetlands degrading water quality and adversely affecting birds and wildlife. Frogs may be especially vulnerable. Plains leopard (Lithobates blairi) metamorphs from RWB wetlands with varying concentrations of pesticides were evaluated for a suite of biomarkers of exposure to endocrine active chemicals. Froglets had ovarian dysgenesis, high rates of testicular oocytes, and female-biased sex ratios however, there was no clear statistical association between pesticide concentrations and biomarkers. Data interpretation was hindered because timing and duration …

History And Evaluation Of National-Scale Geochemical Data Sets For The United States, David B. Smith, Steven M. Smith, John D. Horton

United States Geological Survey: Staff Publications

Six national-scale, or near national-scale, geochemical data sets for soils or stream sediments exist for the United States. The earliest of these, here termed the ‘Shacklette’ data set, was generated by a U.S. Geological Survey (USGS) project conducted from 1961 to 1975. This project used soil collected from a depth of about 20 cm as the sampling medium at 1323 sites throughout the conterminous U.S. The National Uranium Resource Evaluation Hydrogeochemical and Stream Sediment Reconnaissance (NUREHSSR) Program of the U.S. Department of Energy was conducted from 1975 to 1984 and collected either stream sediments, lake sediments, or soils at more …

Remote Sensing Of Evapotranspiration For Operational Drought Monitoring Using Principles Of Water And Energy Balance, Gabriel B. Senay, Stefanie Bohms, James P. Verdin

United States Geological Survey: Staff Publications

Evapotranspiration (ET) is an important component of the hydrologic budget because it reflects the exchange of mass and energy between the soil–water–vegetation system and the atmosphere. Prevailing weather conditions influence potential or reference ET through variables such as radiation, temperature, wind, and relativity humidity. In addition to these weather variables, actual ET (ET_a) is also affected by land cover type and condition, as well as soil moisture. The dependence of ET_a on land cover and soil moisture, and its direct relationship with carbon dioxide assimilation in plants, makes it an important variable for monitoring drought, crop yield, …

Development And Application Of Methods Used To Source Prehistoric Southwestern Maize: A Review, Larry Benson

United States Geological Survey: Staff Publications

Archaeological cobs free of mineral contaminants should be used to source the soils in which they were grown. Mineral contaminants often contain much higher concentrations of metals than vegetal materials and can alter a cob’s apparent metal and heavy-isotope content. Cleaning a cob via immersion in an acid solution for more than a few minutes will result in the incongruent and sometimes complete leaching of metals, including strontium (Sr), from the cob. When using ⁸⁷Sr/⁸⁶Sr to determine the location of potential agriculture fields, it is best to either integrate several depth-integrated soil samples or to integrate several …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Spatially Explicit Models For Inference About Density In Unmarked Or Partially Marked Populations, Richard B. Chandler, J. Andrew Royle

United States Geological Survey: Staff Publications

Recently developed spatial capture-recapture (SCR) models represent a major advance over traditional capture-recapture (CR) models because they yield explicit estimates of animal density instead of population size within an unknown area. Futhermore, unlike nonspatial CR methods, SCR models account for heterogeneity in capture probability arising from the juxtaposition of animal activity centers and sample locations. Although the utility of SCR methods is gaining recognition, the requirement that all individuals can be uniquely identified exludes their use in many contexts. In this paper, we develop models for situations in which individual recognition is not possible, thereby allowing SCR concepts to be …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Sea-Level History During The Last Interglacial Complex On San Nicolas Island, California: Implications For Glacial Isostatic Adjustment Processes, Paleozoogeography And Tectonics, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Lindsey T. Groves, Jerry X. Mitrovica, Deanna Laurel

United States Geological Survey: Staff Publications

San Nicolas Island, California has one of the best records of fossiliferous Quaternary marine terraces in North America, with at least fourteen terraces rising to an elevation of ~270 m above present-day sea level. In our studies of the lowest terraces, we identified platforms at 38–36 m (terrace 2a), 33–28 m (terrace 2b), and 13–8 m (terrace 1). Uranium-series dating of solitary corals from these terraces yields three clusters of ages: ~120 ka on terrace 2a (marine isotope stage [MIS] 5.5), ~120 and ~100 ka on terrace 2b (MIS 5.5 and 5.3), and ~80 ka (MIS 5.1) on terrace 1.We …

Tectonic Influences On The Preservation Of Marine Terraces: Old And New Evidence From Santa Catalina Island, California, R. Randall Schumann, Scott A. Minor, Daniel R. Muhs, Lindsey T. Groves, John P. Mcgeehan

United States Geological Survey: Staff Publications

The California Channel Islands contain some of the best geologic records of past climate and sea-level changes, recorded in uplifted, fossil-bearing marine terrace deposits. Among the eight California Channel Islands and the nearby Palos Verdes Hills, only Santa Catalina Island does not exhibit prominent emergent marine terraces, though the same terrace-forming processes that acted on the other Channel Islands must also have occurred on Santa Catalina. We re-evaluated previous researchers' field evidence and examined new topographic, bathymetric, and stream-profile data in order to find possible explanations for the lack of obvious marine terrace landforms or deposits on the island today. …

Impact Of Vegetation On Land-Atmosphere Coupling Strength And Its Implication For Desertification Mitigation Over East Asia, Boksoon Myoung, Yong-Sang Choi, Suk-Jin Choi, Seon Ki Park

Mathematics, Physics, and Computer Science Faculty Articles and Research

Desertification of the East Asian drylands and the consequent dust transport have been serious concerns for adjacent Asian countries as well as the western United States. Tree planting has been considered one applicable strategy to mitigate the desertification. However, the desired effect of the tree planting would not be brought to fruition unless the newly planted trees change the coupling characteristics between the land and the atmosphere. Based on this perception, we attempt to clarify the effects of vegetation on the coupling strength between the atmosphere and land surface, and we suggest the most efficient areas of tree planting for …

Variability And Trends Of Aerosol Properties Over Kanpur, Northern India Using Aeronet Data (2001–10), Dimitris G. Kaskaoutis, Ramesh P. Singh, Ritesh Gautam, Manish Sharma, P. G. Kosmopoulos, S. N. Tripathi

Mathematics, Physics, and Computer Science Faculty Articles and Research

Natural and anthropogenic aerosols over northern India play an important role in influencing the regional radiation budget, causing climate implications to the overall hydrological cycle of South Asia. In the context of regional climate change and air quality, we discuss aerosol loading variability and trends at Kanpur AERONET station located in the central part of the Indo-Gangetic plains (IGP), during the last decade (2001-10). Ground-based radiometric measurements show an overall increase in column-integrated aerosol optical depth (AOD) on a yearly basis. This upward trend is mainly due to a sustained increase in the seasonal/monthly averaged AOD during the winter (Dec-Feb) …

On The Spatial And Temporal Variability Of Upwelling In The Southern Caribbean Sea And Its Influence On The Ecology Of Phytoplankton And Of The Spanish Sardine (Sardinella Aurita), Digna Tibisay Rueda-Roa

USF Tampa Graduate Theses and Dissertations

The Southern Caribbean Sea experiences a strong upwelling process along the coast from about 61°W to 75.5°W and 10-13°N. In this dissertation three aspects of this upwelling system are examined: (A) A mid-year secondary upwelling that was previously observed in the southeastern Caribbean Sea between June-July, when land based stations show a decrease in wind speed. The presence and effects of this upwelling along the whole southern Caribbean upwelling system were evaluated, as well as the relative forcing contribution of alongshore winds (Ekman Transport, ET) and wind-curl (Ekman Pumping, EP). (B) Stronger upwelling occurs in two particular regions, namely the …

Shelf-Scale Mapping Of Fish Distribution Using Active And Passive Acoustics, Carrie Christy Wall

USF Tampa Graduate Theses and Dissertations

Fish sound production has been associated with courtship and spawning behavior. Acoustic recordings of fish sounds can be used to identify distribution and behavior. Passive acoustic monitoring (PAM) can record large amounts of acoustic data in a specific area for days to years. These data can be collected in remote locations under potentially unsafe seas throughout a 24-hour period providing datasets unattainable using observer-based methods. However, the instruments must withstand the caustic ocean environment and be retrieved to obtain the recorded data. This can prove difficult due to the risk of PAMs being lost, stolen or damaged, especially in highly …