Other Environmental Sciences Commons^™

Loci Associated With Antibody Response In Feral Swine (Sus Scrofa) Infected With Brucella Suis, Courtney F. Pierce, Vienna R. Brown, Steven C. Olsen, Paola Boggiatto, Kerri Pedersen, Ryan S. Miller, Scott E. Speidel, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Feral swine (Sus scrofa) are a destructive invasive species widespread throughout the United States that disrupt ecosystems, damage crops, and carry pathogens of concern for the health of domestic stock and humans including Brucella suis—the causative organism for swine brucellosis. In domestic swine, brucellosis results in reproductive failure due to abortions and infertility. Contact with infected feral swine poses spillover risks to domestic pigs as well as humans, companion animals, wildlife, and other livestock. Genetic factors influence the outcome of infectious diseases; therefore, genome wide association studies (GWAS) of differential immune responses among feral swine can provide …

A Review Of Avian Influenza A Virus Associations In Synanthropic Birds, Susan A. Shriner, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAV) have received significant attention due to the threat they pose to human, livestock, and wildlife health. In this review, we focus on what is known about IAV dynamics in less common avian species that may play a role in trafficking IAVs to poultry operations. Specifically, we focus on synanthropic bird species. Synanthropic species, otherwise known as peridomestic, are species that are ecologically associated with humans and anthropogenically modified landscapes, such as agricultural and urban areas. Aquatic birds such as waterfowl and shorebirds are the species most commonly associated with avian IAVs, and are generally considered …

Resource Selection At Homesites By Wolves And Eastern Coyotes In A Canis Hybrid Zone, Teresa Oliveira, John F. Benson, Connor Thompson, Brent R. Patterson

School of Natural Resources: Faculty Publications

We modeled resource selection by wolves (Canis spp.), eastern coyotes (C. latrans), and admixed canids during the pup-rearing season at den and rendezvous sites (collectively, homesites) within a largely unprotected landscape proposed as the recovery zone for federally and provincially threatened eastern wolves (C. lycaon) in Ontario, Canada. Overall, canids selected wetlands, while avoiding secondary roads and open-structure rock-grass habitat patches. Packs with greater wolf ancestry selected wetlands and tertiary roads more strongly, while avoiding mixed conifer-hardwood forests. Contrary to our prediction, canids with greater coyote ancestry did not establish homesites closer to roads, which likely mitigated their risk of …

Developing A Model Of Graduate Teaching Assistant Teacher Efficacy: How Do High And Low Teacher Efficacy Teaching Assistants Compare?, Cody R. Smith, Cesar Delgado

School of Natural Resources: Faculty Publications

Graduate teaching assistants (TAs) are often responsible for teaching introductory courses to undergraduate science, technology, engineering, and mathematics students. The TAs are usually novices at teaching, and an important factor in their resilience and persistence in the face of inevitable challenges is self-efficacy. Little is known about what affects TA teacher efficacy or whether and how high- and low-efficacy TAs differ in their development as teachers. Bridging these gaps in the literature will inform best practices in developing and implementing professional development (PD) for TAs. Using a mixed-methods sequential exploratory research design, this study found differences in high- and low-efficacy …

Advancing Best Practices For Aversion Conditioning (Humane Hazing) To Mitigate Human–Coyote Conflicts In Urban Areas, Lesley Sampson, Lauren Van Patter

Human–Wildlife Interactions

Coyotes (Canis latrans) are now recognized as a permanent feature in urban environments across much of North America. Behavioral aversion conditioning, or humane hazing, is increasingly advocated as an effective and compassionate alternative to wildlife management strategies, such as trap and removal. Given a growing public interest in humane hazing, there is a need to synthesize the science regarding methods, outcomes, efficacy, and other relevant considerations to better manage human–coyote conflicts in urban areas. This paper was prepared as an outcome of a workshop held in July 2019 by Coyote Watch Canada (CWC) to synthesize the literature on …

Implementation Of An Occupancy-Based Monitoring Protocol For A Widespread And Cryptic Species, The New England Cottontail (Sylvilagus Transitionalis), Colin P. Shea, Mitchell J. Eaton, Darryl I. Mackenzie

United States Geological Survey: Staff Publications

Context. Designing effective long-term monitoring strategies is essential for managing wildlife populations. Implementing a cost-effective, practical monitoring program is especially challenging for widespread but locally rare species. Early successional habitat preferred by the New England cottontail (NEC) has become increasingly rare and fragmented, resulting in substantial declines from their peak distribution in the mid-1900s. The introduction of a possible competitor species, the eastern cottontail (EC),may also have played a role. Uncertainty surrounding how these factors have contributed to NEC declines has complicated management and necessitated development of an appropriate monitoring framework to understand possible drivers of distribution and dynamics.

Aims. …

A Profile Shape Correction To Reduce The Vertical Sensitivity Of Cosmic-Ray Neutron Sensing Of Soil Moisture, Lena M. Scheiffele, Gabriele Baroni, Trenton E. Franz, Jannis Jakobi, Sascha E. Oswald

School of Natural Resources: Faculty Publications

n recent years, cosmic-ray neutron sensing (CRNS) has shown a large potential among proximal sensing techniques to monitor soil moisture noninvasively, with high frequency and a large support volume (radius up to 240 m and sensing depth up to 80 cm). This signal is, however, more sensitive to closer distances and shallower depths. Inherently, CRNS-derived soil moisture is a spatially weighted value, different from an average soil moisture as retrieved by a sensor network. In this study, we systematically test a new profile shape correction on CRNS-derived soil moisture, based on additional soil moisture profile measurements and vertical unweighting, which …

Frost Identification Guide For Cereals, Ben Biddulph, Department Of Primary Industries And Regional Development, Western Australia

Bulletins 4000 -

Frost damage reduces crop yield and grain quality. Early identification of symptoms allows timely crop salvage decisions to be made.

Tools, Techniques And Teamwork: Transferring New Technologies For Wildlife Management, Conservation And Economic Development, John Eisemann, Gail Keirn

United States Department of Agriculture Wildlife Services: Staff Publications

Did you ever wonder who invented radio telemetry? Or breakaway snares? What about the bird repellent methyl anthranilate or the livestock protection collar? These and many other tools used in wildlife damage management resulted from creative thinking by biologists, technicians, researchers and managers working to solve complex wildlife issues. Over the past 90 years, these “aha moments” within the U.S. Department of Agriculture’s Wildlife Services program have ranged from developing novel scare devices, traps and vaccines to exploiting an animal’s visual capabilities to stop unwanted behaviors. Once discovered, these unique ideas may lead to practical, feasible and cost-effective wildlife damage …

Droughtscape, Fall 2020, National Drought Mitigation Center

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

DroughtScape, Fall 2020

Instability Of Glucocorticoid Metabolites In Coyote Scats: Implications For Field Sampling, Erika T. Stevenson, Eric M. Gese, Lorin A. Neuman-Lee, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Studying physiologic stress responses can assist in understanding the welfare of animals. One method of measuring the physiologic stress response is evaluating concentrations of glucocorticoid metabolites in feces. Previously, using an adrenocorticotropic hormone challenge, we found fecal glucocorticoid metabolite levels were a reliable indicator of physiologic stress response in coyotes (Canis latrans). We determine whether glucocorticoid metabolite concentrations remain stable when collecting feces over a 2-week period, a timeframe commonly used in scat surveys for wild canids. We collected feces from 6 captive coyotes maintained at the U.S. Department of Agriculture, Wildlife Services, National Wildlife Research Center, Predator …

Forecasting Vegetation Health In The Mena Region By Predicting Vegetation Indicators With Machine Learning Models, Sachi Perera, Wenzhao Li, Erik Linstead, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Machine learning (ML) techniques can be applied to predict and monitor drought conditions due to climate change. Predicting future vegetation health indicators (such as EVI, NDVI, and LAI) is one approach to forecast drought events for hotspots (e.g. Middle East and North Africa (MENA) regions). Recently, ML models were implemented to predict EVI values using parameters such as land types, time series, historical vegetation indices, land surface temperature, soil moisture, evapotranspiration etc. In this work, we collected the MODIS atmospherically corrected surface spectral reflectance imagery with multiple vegetation related indices for modeling and evaluation of drought conditions in the MENA …

Algal Biomarkers As A Proxy For Pco2: Constraints From Late Quaternary Sapropels In The Eastern Mediterranean, Caitlyn R. Witkowski, Marcel T.J. Van Der Meer, Brian Blais, Jaap S. Sinninghe Damsté, Stefan Schouten

Science and Technology Department Faculty Journal Articles

Records of carbon dioxide concentrations (partial pressure expressed as pCO2) over Earth’s history provide trends that are critical to understand our changing world. To better constrain pCO2 estimations, here we test organic pCO2 proxies against the direct measurements of pCO2 recorded in ice cores. Based on the concept of stable carbon isotopic fractionation due to photosynthetic CO2 fixation (Ɛp), we use the stable carbon isotopic composition (δ13C) of the recently proposed biomarker phytol (from all photoautotrophs), as well as the conventionally used alkenone biomarkers (from specific species) for comparison, to reconstruct pCO2 over several Quaternary …

Repetitive Sampling And Control Threshold Improve 16s Rrna Gene Sequencing Results From Produced Waters Associated With Hydraulically Fractured Shale, Jenna L. Shelton, Elliott P. Barnhart, Leslie Ruppert, Aaron M. Jubb, Madalyn S. Blondes, Christina A. Devera

United States Geological Survey: Staff Publications

Sequencing microbial DNA from deep subsurface environments is complicated by a number of issues ranging from contamination to non-reproducible results. Many samples obtained from these environments – which are of great interest due to the potential to stimulate microbial methane generation – contain low biomass. Therefore, samples from these environments are difficult to study as sequencing results can be easily impacted by contamination. In this case, the low amount of sample biomass may be effectively swamped by the contaminating DNA and generate misleading results. Additionally, performing field work in these environments can be difficult, as researchers generally have limited access …

Effects Of Riparian Deforestation On Benthic Invertebrate Community And Leaf Processing In Atlantic Forest Streams, Monalisa Silva-Araujo, Eduardo F. Silva-Junior, Vinicius Neres-Lima, Rafael Feijo-Lima, Flavia Tromboni, Christine Lourenco-Amorim, Steven A. Thomas, Timothy P. Moulton

School of Natural Resources: Faculty Publications

Riparian deforestation may strongly affect stream functioning, with consequences for biodiversity and ecosystem services. These effects can be assessed using bioindicators relating to biotic community structure and ecosystem functioning. We evaluated the effects of riparian deforestation on 1. measures of community structure using aquatic benthic invertebrates, and 2. an aspect of ecosystem functioning, aquatic leaf processing. We selected sites along gradients of riparian land use in four Atlantic rainforest streams and measured physical and chemical properties for their association with riparian deforestation. We sampled benthic invertebrates and calculated metrics of community structure at each site. We measured rates of leaf …

Spatiotemporal Variations Of City-Level Carbon Emissions In China During 2000–2017 Using Nighttime Light Data, Yu Sun, Sheng Zheng, Yuzhe Wu, Uwe Schlink, Ramesh P. Singh

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

China is one of the largest carbon emitting countries in the world. Numerous strategies have been considered by the Chinese government to mitigate carbon emissions in recent years. Accurate and timely estimation of spatiotemporal variations of city-level carbon emissions is of vital importance for planning of low-carbon strategies. For an assessment of the spatiotemporal variations of city-level carbon emissions in China during the periods 2000–2017, we used nighttime light data as a proxy from two sources: Defense Meteorological Satellite Program’s Operational Linescan System (DMSP-OLS) data and the Suomi National Polar-orbiting Partnership satellite’s Visible Infrared Imaging Radiometer Suite (NPP-VIIRS). The results …

Dynamic Scaling Of The Generalized Complementary Relationship (Gcr) Improves Long-Term Tendency Estimates In Land Evaporation, Jozsef Szilagyi, Richard Crago, Ning Ma

School of Natural Resources: Faculty Publications

Most large-scale evapotranspiration (ET) estimation methods require detailed information of land use, land cover, and/or soil type on top of various atmospheric measurements. The complementary relationship of evaporation (CR) takes advantage of the inherent dynamic feedback mechanisms found in the soil−vegetation−atmosphere interface for its estimation of ET rates without the need of such biogeophysical data. ET estimates over the conterminous United States by a new, globally calibrated, static scaling (GCR-stat) of the generalized complementary relationship (GCR) of evaporation were compared to similar estimates of an existing, calibration-free version (GCR-dyn) of the GCR that employs a temporally varying dynamic scaling. Simplified …

Agate Fossil Beds National Monument, Paleontological Resources Management Plan (Public Version), Scott Kottkamp, Vincent L. Santucci, Justin S. Tweet, Jessica De Smet, Ellen Stark

United States National Park Service: Publications

Executive Summary

Since Agate Springs Ranch was founded by James H. Cook in 1887, exquisite examples of transitional Miocene mammalian fauna have been found along this stretch of the Niobrara River valley. Collectively these paleontological discoveries, along with the existing archeological and historical Native American collection, were the basis for establishing Agate Fossil Beds National Monument (AGFO) as a unit of the National Park System (NPS). The fossil remains from the Harrison and Anderson Ranch formations span a short, but important, time period within the Miocene Epoch. AGFO has provided science with an intimate look into North American mammalian evolution …

Assessment Of Switchgrass-Based Bioenergy Supply Using Gis-Based Fuzzy Logic And Network Optimization In Missouri (U.S.A.), Gia Nguyen, Erik Lyttek, Pankaj Lal, Taylor Wieczerak, Pralhad Burli

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

Bioenergy has been globally recognized as one of the sustainable alternatives to fossil fuels. An assured supply of biomass feedstocks is a crucial bottleneck for the bioenergy industry emanating from uncertainties in land-use changes and future prices. Analytical approaches deriving from geographical information systems (GIS)-based analysis, mathematical modeling, optimization analyses, and empirical techniques have been widely used to evaluate the potential for bioenergy feedstock. In this study, we propose a three-phase methodology integrating fuzzy logic, network optimization, and ecosystem services assessment to estimate potential bioenergy supply. The fuzzy logic analysis uses multiple spatial criteria to identify suitable biomass cultivating regions. …

Resilience Characteristics Of The Urban Agriculture System In Lansing, Michigan: Importance Of Support Actors In Local Food Systems, Caitlin K. Kirby, Lissy Goralnik, Jennifer Hodbod, Zach Piso, Julie C. Libarkin

School of Natural Resources: Faculty Publications

Urban agriculture is a growing movement in cities across the United States, including the post-industrial Midwest. Maintaining a resilient local food system is a challenge given the environmental, resource, and institutional barriers facing urban farmers. In this descriptive correlational study, we take an in-depth look at the demographics, farm characteristics, motivations, barriers, and resilience indicators of individuals in the urban agriculture system in Lansing, Michigan, a city of the US Midwest with a growing urban agriculture system. Survey responses (n = 92) revealed that support actors, community gardeners, and farmers have descriptive differences in their motivations, with support actors (e.g. …

Evaluating Airsoft Electric Guns For Control Of Invasive Brown Treesnakes, Adam J. Knox, Björn Lardner, Amy Yackel Adams, Robert N. Reed

United States Geological Survey: Staff Publications

Firearms are often used in lethal control of invasive vertebrates, but safety and regulatory aspects limit the circumstances under which they can be used. During August 2016 at the Brown Treesnake Project laboratory on Guam, we evaluated hobby‐grade Airsoft Electric Guns (AEGs; a lower powered, less‐hazardous, and less‐regulated alternative to firearms) for capture and control of small animals, with specific emphasis on invasive brown treesnakes (Boiga irregularis). Tests of AEGs differing in power with ammunition (plastic pellets) masses ranging from 0.20 to 0.39 g, fired at gelatin blocks from distances of 4, 8, and 12 m, showed that …

Vampire Bats: Preparing For Range Expansion Into The U.S., Michael J. Bodenchuk, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

The common vampire bat apparently is expanding its range northwards in Mexico and seems poised to enter the southern United States. Climate models predict suitable habitat in the U.S. in south Texas and parts of southern Arizona. While vampire bats’ northward range expansion is not unexpected, the fact that this species brings a strain of rabies that impacts livestock and people warrants a strategic response. Annual economic damages from bats are estimated between $7M and $9M, largely associated with deaths of livestock from rabies. To prepare for the emerging rabies issue, USDA Wildlife Services programs in Texas and Arizona have …

Growing Season Air Mass Equivalent Temperature (TE) In The East Central Usa, Dolly Na-Yemeh, Rezaul Mahmood, Gregory Goodrich, Keri Younger, Kevin Cary, Joshua D. Durkee

School of Natural Resources: Faculty Publications

Equivalent temperature (T_E), which incorporates both dry (surface air temperature, T) and moist heat content associated with atmospheric moisture, is a better indicator of overall atmospheric heat content compared to T alone. This paper investigates the impacts of different types of air masses on T_E during the growing season (April–September). The study used data from the Kentucky Mesonet for this purpose. The growing season was divided into early (April–May), mid (June–July), and late (August–September). Analysis suggests that T_E for moist tropical (MT) air mass was as high as 61 and 81 °C for the early and …

Foliar Application Of Low Concentrations Of Titanium Dioxide And Zinc Oxide Nanoparticles To The Common Sunflower Under Field Conditions, Marek Kolenčík, Dávid Ernst, Martin Urík, Ľuba Ďurišová, Marek Bujdoš, Martin Šebesta, Edmund Dobročka, Samuel Kšiňan, Ramakanth Illa, Qian Yu, Huan Feng, Ivan Černý, Veronika Holišová, Gabriela Kratošová

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

Nano-fertilisers have only recently been introduced to intensify plant production, and there still remains inadequate scientific knowledge on their plant-related effects. This paper therefore compares the effects of two nano-fertilisers on common sunflower production under field conditions. The benefits arising from the foliar application of micronutrient-based zinc oxide fertiliser were compared with those from the titanium dioxide plant-growth enhancer. Both the zinc oxide (ZnO) and titanium dioxide (TiO₂) were delivered by foliar application in nano-size at a concentration of 2.6 mg·L⁻¹. The foliar-applied nanoparticles (NPs) had good crystallinity and a mean size distribution under 30 nm. …

Underground Phased Arrays And Beamforming Applications, Abdul Salam, Usman Raza

Faculty Publications

This chapter presents a framework for adaptive beamforming in underground communication. The wireless propagation is thoroughly analyzed to develop a model using the soil moisture as an input parameter to provide feedback mechanism while enhancing the system performance. The working of array element in the soil is analyzed. Moreover, the effect of soil texture and soil moisture on the resonant frequency and return loss is studied in detail. The wave refraction from the soil–air interface highly degrades the performance of the system. Furthermore, to beam steering is done to achieve high gain for lateral component improving the UG communication. The …

Current Advances In Internet Of Underground Things, Abdul Salam, Usman Raza

Faculty Publications

The latest developments in Internet of Underground Things are covered in this chapter. First, the IOUT Architecture is discussed followed by the explanation of the challenges being faced in this paradigm. Moreover, a comprehensive coverage of the different IOUT components is presented that includes communications, sensing, and system integration with the cloud. An in-depth coverage of the applications of the IOUT in various disciplines is also surveyed. These applications include areas such as decision agriculture, pipeline monitoring, border control, and oil wells.

Soil Moisture And Permittivity Estimation, Abdul Salam, Usman Raza

Faculty Publications

The soil moisture and permittivity estimation is vital for the success of the variable rate approaches in the field of the decision agriculture. In this chapter, the development of a novel permittivity estimation and soil moisture sensing approach is presented. The empirical setup and experimental methodology for the power delay measurements used in model are introduced. Moreover, the performance analysis is explained that includes the model validation and error analysis. The transfer functions are reported as well for soil moisture and permittivity estimation. Furthermore, the potential applications of the developed approach in different disciplines are also examined.

Signals In The Soil: Subsurface Sensing, Abdul Salam, Usman Raza

Faculty Publications

In this chapter, novel subsurface soil sensing approaches are presented for monitoring and real-time decision support system applications. The methods, materials, and operational feasibility aspects of soil sensors are explored. The soil sensing techniques covered in this chapter include aerial sensing, in-situ, proximal sensing, and remote sensing. The underlying mechanism used for sensing is also examined as well. The sensor selection and calibration techniques are described in detail. The chapter concludes with discussion of soil sensing challenges.

Decision Agriculture, Abdul Salam, Usman Raza

Faculty Publications

In this chapter, the latest developments in the field of decision agriculture are discussed. The practice of management zones in digital agriculture is described for efficient and smart faming. Accordingly, the methodology for delineating management zones is presented. Modeling of decision support systems is explained along with discussion of the issues and challenges in this area. Moreover, the precision agriculture technology is also considered. Moreover, the chapter surveys the state of the decision agriculture technologies in the countries such as Bulgaria, Denmark, France, Israel, Malaysia, Pakistan, United Kingdom, Ukraine, and Sweden. Finally, different field factors such as GPS accuracy and …

Autonomous Irrigation Management In Decision Agriculture, Abdul Salam, Usman Raza

Faculty Publications

In this chapter, the important application of autonomous irrigation management in the field decision agriculture is discussed. The different types of sensor-guided irrigation systems are presented that includes center pivot systems and drip irrigation systems. Their sensing and actuator components are with detailed focus on real-time decision-making and integration to the cloud. This chapter also presents irrigation control systems which takes, as an input, soil moisture and temperature from IOUT and weather data from Internet and communicate with center pivot based irrigation systems. Moreover, the system architecture is explored where development of the nodes including sensing and actuators is presented. …