Natural Resources and Conservation Commons^™

Iere Annual Report 2026, Erin Largo-Wight, Heather Barnes Truelove, Kelly Rhoden, Jessica Barnes, Lauren Canady, Nicole Lowe, Ruby Cox, Sydney Barrett, Kathleen Hutton

Annual Reports

2026 Annual Report of the Institute for Environmental Research and Education

Lessons For Transformative Ocean Science From The Integrated Marine Biosphere Research (Imber) Project, Deborah Santos Prado, Ella-Kari Muhl, Mia Strand, Derek Armitage, Nina Bednaršek, Stephanie Brodie, Christopher Cvitanovic, John Claydon, Sam Dupont, Karen Evans, Alistar Hobday, Eileen Hofmann, Raleigh Hood, Laura Kaikkonen, Dongyan Liu, Jessica Melbourne-Thomas, Franz Mueter, Eugene Murphy, Prateep Kumar Nayak, Alice Newton, Heidi Pethybridge, Carol Robinson, Samiya Selim, Rowan Trebilco, Micaela Trimble, Fang Zuo

CCPO Publications

This paper synthesizes the key contributions and lessons learned from Integrated Marine Biosphere Research (IMBeR), a large-scale global research project aimed at fostering ocean sustainability under global change for the benefit of society. The UN Decade of Ocean Science for Sustainable Development has catalyzed a renewed focus on the importance of transforming ocean science. IMBeR’s global activity over the past decade has focused on promoting transformative science by generating, mobilizing, and communicating the knowledge needed to support ocean governance. Key contributions from IMBeR participants include quantifying and comparing historic and present structure and functioning of linked ocean and human systems, …

Anuran Occupancy Of Created Wetlands Within Reforested Legacy Surface Mines In Kentucky And West Virginia, Jillian C. Newman, Steve Price, Jacquelyn C. Guzy, Joshua Castle, John J. Cox, Jeffery L. Larkin, Christopher D. Barton

Forestry and Natural Resources Faculty Publications

Restoration of habitat is an important component of wildlife management. Surface coal mining has altered forest cover in the Central Appalachians, and most reclamation activities on previously mined lands result in non-native grasslands or shrub lands. The Forestry Reclamation Approach (FRA), which emphasizes non-native vegetation removal, soil decompaction, planting of native trees and shrubs, and, in some cases, wetland creation represents an alternative to grassland-based reclamation that may promote forest-associated wildlife on legacy surface mines. We used automated recording units to evaluate the response of anurans to created wetlands and the FRA in Kentucky and West Virginia, USA. We used …

Data-Driven Methodologies For Mapping Cultural Heritage: The Case Of The National Coal Heritage Area, West Virginia, Usa, Hossain Mohammad Nahyan

Graduate Theses, Dissertations, and Problem Reports (ETD)

The objective of this dissertation was to develop a comprehensive, data-driven spatial framework for characterizing the complex cultural landscape of the National Coal Heritage Area (NCHA) in West Virginia. By transitioning away from traditional, heuristic spatial mapping, this research integrates advanced spatial statistics, machine learning, and GIS-based methodologies to objectively quantify the physical, visual, and cultural dimensions of the post-mining environment. The research is structured around three interconnected empirical studies, each addressing a specific scale of the Landscape Character Assessment (LCA) framework to support heritage conservation and sustainable spatial planning. The first paper focused on landform classification, developing an automated …

The Geomorphology And Hydrogeology Of Pre-Restoration West Fork Teanaway River, Wa, Usa, Shana M. Egan

All Master's Theses

The West Fork Teanaway (WFT) River in Kittitas County, WA is an entrenched bedrock river channel with disturbed floodplain geomorphology and degraded riparian ecology. Two stream restoration approaches, “stage 0” valley bottom reset and engineered logjam installation, will be installed at the WFT in summer 2026 by collaborators at the Washington State Department of Fish and Wildlife and Mid-Columbia Fisheries Enhancement Group. The objective of this study was to constrain the pre-restoration geomorphic and hydrologic conditions of the WFT. The WFT has an unconsolidated floodplain aquifer of predominantly coarse-grained fluvial deposits. Monitoring of groundwater and surface water levels began in …

Effectiveness Of Walleye Stocking In Winter Kill Lakes, Tyler Haus

Journal of Earth and Life Science

Winter kill events, marked by extensive fish mortality due to hypoxic conditions under the ice, are a common phenomenon in shallow eutrophic lakes, especially in the northern lakes in the northern United States. These events can drastically alter fish communities and often result in the elimination of top predators. Though these lakes will typically slowly bounce back to what they were in a couple of years. This study evaluates the effectiveness of walleye, Sander vitreus, stocking in lakes after a winter kill. For this study, four known winter kill lakes that are consistently stocked with walleye were studied. Pre- …

Assessing Urban–Rural Differences In Largemouth Bass Abundance In Minnesota, Jonathan Gates

Journal of Earth and Life Science

Urbanization can significantly alter freshwater ecosystems and influence sport fish populations. This study examined differences in largemouth bass Micropterus nigricans catch-per-unit-effort (CPUE) between urban and rural lakes in Minnesota and evaluated temporal changes between 2000–2010 and 2011–2021. Forty lakes (20 urban, 20 rural) were selected using Minnesota Department of Natural Resources fisheries survey data. Lakes were classified using NLCD 2019 land cover data, with ≥10% developed land designated as urban. Nonparametric analyses (Wilcoxon rank-sum and signed-rank tests) were used to assess spatial and temporal differences in CPUE. Results showed that rural lakes had consistently higher median CPUE than urban lakes …

Neonicotinoid Bioaccumulation In Bluegill And Bullhead Within Lake Julia And Lake Zumwalde, Jake Stuber

Journal of Earth and Life Science

Brown Bullhead Ameiurus nebulosus, Yellow Bullhead Ameiurus natalis, and Bluegill Lepomis macrochirus are unique in their stark differences. Bullhead are scaleless bottom feeders that can tolerate high pollution and low O₂ conditions. In contrast, Bluegill are scaled, aggressive nesters and are less tolerant of high pollutants or low-oxygen conditions. Among these pollutants include a class of chemicals called neonicotinoids (hereafter referred to as neonics). Neonics are a class of insecticides primarily used within agriculture and pest management. Due to the effectiveness, application has escalated on a global scale. They have been well documented by many toxicology assessments. …

Powering The Machine, Draining The Planet: Whether U.S. Environmental Law Is Equipped To Regulate The Energy And Water Demands Of Ai Data Centers, Michael Marcu

Journal of Earth and Life Science

Artificial intelligence (AI) data centers have become one of the United States' fastest-growing and least-regulated sources of environmental stress. In 2024 alone, U.S. data centers consumed 183 terawatt-hours (TWh) of electricity more than the entire nation of Pakistan and consumed an estimated 17 billion gallons of water (IEA, 2025; Berkeley Lab, 2024). By 2030, electricity demand from these facilities is projected to reach 426 TWh, a 133% increase in six years (Pew Research Center, 2025). This paper examines whether the existing U.S. environmental regulatory framework put by the National Environmental Policy Act (NEPA), the Clean Water Act (CWA), and the …

Evaluating Willow Establishment With Biochar For Remediation Of Mine Waste Soils: Amendment Ph Determines Plant Biomass And Metal Mobility, Madeline R. Webb

Dissertations, Master's Theses and Master's Reports

Heavy metal contaminated mine tailings (“stamp sands”) from historic copper mining inhibit plant establishment and contribute to ongoing metal contamination. Biochar amendments may enhance plant growth and reduce metal mobility in highly permeable mine waste soils, but the efficacies of different application methods or biochar sources and composition are uncertain. We evaluated different biochar sources (neutral or alkaline pH) and application methods (either mixed or layered) for planted willow growth, moisture retention, and metal mobility. A 10-week growth chamber experiment assessed plant performance, heavy metal content and heavy metal mobility in soil leachates and plant tissues. Biochar pH was the …

Floodwater Salinity And Flood Duration Regulate Greenhouse Gas Production In High- Latitude Coastal Wetland And Tundra Soils, Mia J. Dicianna

Electronic Theses and Dissertations

Coastal high-latitude ecosystems are increasingly flooded from storm surges associated with climate change, exposing soils that were historically infrequently inundated to higher-salinity waters for longer durations. Sub-Arctic wetlands and tundra store large amounts of carbon, yet how flooding characteristics, particularly flood duration, influence microbial mineralization and, consequently, greenhouse gas (GHG) production in these soils remains poorly understood. We conducted a full-factorial microcosm incubation experiment in which coastal wetland and tundra soils were subjected to simulated flooding with three durations (1, 3, and 10 days) and four salinity treatments (unflooded, freshwater, 3 ppt, and 12 ppt) and measured carbon dioxide (CO2) …

Assessing Climate Change Impacts On Wildfire Risk In Central Appalachian Forests Of The Eastern United States, Imiya Mudiyanselage Chathuranika, Dalya Ismael

Engineering Technology Faculty Publications

Wildfire risk is increasing in the eastern U.S., yet spatial and climate-driven assessments remain limited. This study evaluates climate change impacts on wildfire risk in the Upper James Watershed (UJW) using baseline (2000–2019), near-future (2021–2040), and far-future (2061–2080) projections from a 12-model CMIP6 global climate model (GCM) ensemble under SSP2–4.5 and SSP5–8.5. A wildfire risk model was developed in ArcGIS Pro using nine key factors and validated with MODIS hotspot data, showing good agreement between modeled risk patterns and observed fire occurrences (NOF = 0.21, RMSE = 4.20, MAE = 3.37). Baseline risk was primarily driven by land cover, fire-lookout …

Early Successional Response To Stream Daylighting In Redwood National And State Parks, Orick, California, Rylee Rawson

Cal Poly Humboldt theses and projects

In-channel stream restoration projects can act as both disturbance and recovery mechanisms, disrupting existing conditions to reestablish the hydrologic and ecological processes that sustain stream ecosystems. These interventions initiate successional trajectories in which channel form and biological communities reorganize over time. In Redwood National and State Parks (California, USA), the Redwoods Rising initiative restores buried headwater channels by recontouring legacy logging roads and daylighting streams buried by Humboldt crossings. Using the National Park Service Klamath Network wadable stream monitoring protocol, I evaluated nine restored reaches spanning one to five years post-restoration, alongside old-growth reference reaches and available pre-treatment data. I …

Development Of The Core Lit Apparatus For Seaweed Hatcheries (Clash) Bioreactor Using A Germplasm Approach, Phillip O. Tahimic

Cal Poly Humboldt theses and projects

In comparison to the Asian aquaculture industry, the United States has minimal seaweed production. There are several drivers of the limited industry in the US, such as regulatory constraints and limited market demand, but the ability to scale is a considerable barrier to commercialization. One possible solution is the development of land-based systems that integrate bioreactors, which utilize fewer resources and do not wholly rely on an oceanic flow-through system. This study assessed the application of a modular bioreactor, known as Core Lit Apparatus for Seaweed Hatcheries (CLASH), as a nursery system and open-source project designed to expand land-based seaweed …

Land Cover Classification Using Optimized Imagery Resolution And Machine Learning Algorithms For A Long-Term Monitoring And Restoration Project, Jessica R. Suoja

Cal Poly Humboldt theses and projects

Ecosystem services and functions are prone to water resource exploitation resulting in cascading effects that include decrease of biodiversity and loss of riparian vegetation, a keystone habitat in desert riparian ecosystems. Mono Lake is a prime example of overexploitation of water resources leading to legal action and eventually a legally mandated long-term monitoring and restoration project. Monitoring and restoration projects can benefit from techniques such as remote sensing and machine learning algorithms to generate accurate land cover classification maps for calculating land cover change over time. However, the spatial resolution of remote sensing imagery and the machine learning algorithms chosen …

Integrating Multi-Method Monitoring To Characterize Seasonal Habitat Use Of Green Sturgeon (Acipenser Medirostris) In Humboldt County, California, Olivia S. Boeberitz

Cal Poly Humboldt theses and projects

Green sturgeon (Acipenser medirostris) are a long-lived, anadromous, iteroparous species that spawns in large West Coast North American rivers but ranges widely in the coastal ocean. For coastal California Native American Tribes, green sturgeon are a vital part of their cultural heritage and traditions, and central to their food security. Two genetically distinct population segments (DPSs) of green sturgeon are recognized in the United States, Canada, and Mexico; the southern DPS is listed as “threatened” under the Endangered Species Act and the northern DPS is considered of “conservation concern.” Although green sturgeon are known to use large estuaries …

Assessing Coho Salmon (Oncorhynchus Kisutch) Distribution Using Traditional Sampling Methods In Conjunction With Edna On Trinity River Tributaries Within The Hoopa Tribal Boundaries, Ely D. Boone

Cal Poly Humboldt theses and projects

Detecting the presence of species using environmental DNA (eDNA) is a fast-growing field of study that shows much promise for population monitoring. In fisheries biology, eDNA is a potentially powerful tool compared to traditional fisheries monitoring techniques such as visual observation via snorkel surveys. When eDNA and traditional survey methods are employed in tandem, using the same spatial and temporal sampling design, eDNA often detects target species when traditional methods do not. In this study, instead of utilizing this paired study design, I implemented eDNA and snorkel surveys at different sampling scales with eDNA being collected at a single downstream …

Factors Influencing Tree Vigor And Structural Failure Along Powerline Corridors In Northern California: A Multi-Species Analysis, David Justin Dorval

Cal Poly Humboldt theses and projects

Tree failures (e.g., stem breakage, uprooting, or branch drop) can pose significant risks to public safety, particularly along powerline corridors for the risk of power outages and wildfire ignitions. In California, tree-related powerline failures have led to severe ecological and human costs in recent years. Despite extensive research on tree failure in urban environments and post-disturbance contexts, comparatively little empirical work has examined where powerlines intersect largely unmanaged stands. This study evaluates tree failure trends across multiple forest types in Northern California by examining how tree-level characteristics influence recent growth and failure occurrence in regionally dominant tree species. Specifically, the …

Contribution Of Lagoon-Rearing Juvenile Chinook Salmon (Oncorhynchus Tshawytscha) To The Adult Spawning Population In The Mattole River, Emma Held

Cal Poly Humboldt theses and projects

Bar-built estuaries are rivermouth confluences characterized by periods of disconnection between the river and the ocean due to a sandbar that builds across the mouth. Sandbar timing characteristics vary between years and between systems, but when closed, a lake-like lagoon forms in the estuary footprint. The Mattole River has a bar-built estuary that forms in late spring or early summer, often overlapping with juvenile Chinook salmon outmigration. Juveniles that do not leave the river before the bar closes must remain in the lagoon until the mouth opens in fall. The purpose of this thesis was to understand if lagoon-rearing is …

A Framework For Evaluating Riparian Climate Refugia In The Eel River Watershed, California, Farrah Tyler

Cal Poly Humboldt theses and projects

Climate change is increasing the need to identify and protect landscapes that support biodiversity through both habitat connectivity and climate refugia. Climate refugia are areas that remain relatively buffered from regional climatic change, enabling species to persist despite shifting environmental conditions. Riparian ecosystems can function as both movement corridors and climate refugia, yet methods for identifying these features and understanding the environmental processes that sustain them remain limited. In California's North Coast region, the identification and conservation of watersheds that may serve as climate refugia for sensitive plant and animal species will be essential for long-term ecosystem management and conservation. …

The Sub-Lethal Effects Of Trematode Parasites On The Migratory Behavior Of Lesser Scaup (Aythya Affinis), Scott Alan Herman

Graduate Research Theses & Dissertations

The introduction of the invasive freshwater faucet snail (Bithynia tentaculata) and its associated parasites in the Upper Mississippi River and Great Lakes Region provides the opportunity to investigate how anthropogenic stressors impact the life history of lesser scaup (Aythya affinis) using the Mississippi Flyway. To understand the life histories and interactions between lesser scaup and faucet snails we examined historical records, research, and ecology textbooks. Our literature review identified critical knowledge gaps in lesser scaup literature surrounding population dynamics, reproduction, and migration. Specifically, the sub-lethal effects of invasive trematodes on the migratory behavior of lesser scaup in the Upper Mississippi …

A Sustainable & Universal Redesign Of Hickory Hill Park In Richmond, Virginia, Ren Hollis, Cynthia Lin, Kira Miller, Jackson Nivera, Patrick O’Shea, Corinne Tsou, Hayston Wines

Undergraduate Research Posters

Urban green spaces provide essential environmental, psychological, and physical benefits, yet access to these resources is often inequitable. Cities are increasingly vulnerable to climate change, highlighting the need for adaptive design. This study focuses on the redesign of Hickory Hill Park in Southside Richmond, selected through a combination of site suitability analysis and qualitative survey. The guiding research question is: How can a park in Richmond be designed to optimize environmental resilience, accessibility, and community benefits?

The selection of a research location and scope used a mixed-methods approach integrating spatial analysis, environmental assessment, and community engagement. A site suitability analysis …

Evaluating Planting Methods For Native Seed Production And Exploring Granivory In The Northern Great Plains, Allison Dollen

Electronic Theses and Dissertations

Temperate grasslands have faced immense losses due to land use change in the last 150 years and less than half of the overall grasslands that once covered North America remain today. A portion of historic and remaining U.S. grasslands are located within the northern Great Plains (NGP) region which is home to over 1,600 species of native plants and provides many ecosystem services and economic benefits. Initiatives to restore grasslands and their ecosystem services are currently underway, but barriers such as limited native seed supply and granivory hinder restoration efforts. My first chapter addresses knowledge gaps in planting methods for …

Evaluating Species At Risk In Data-Limited Fisheries: A Productivity-Susceptibility Analysis For Marine Aquarium Fish, Gabrielle A. Baillargeon, Alice A. Wynn, Jemelyn Grace P. Baldisimo, Michael F. Tlusty, Andrew L. Rhyne

Biological Sciences Faculty Publications

The marine aquarium trade (MAT) is a significant global industry harvesting millions of wild-caught, live coral reef fishes for public and private aquaria markets in the United States and Europe annually, while supporting fisher livelihoods in the Indo-Pacific. This diverse and species-rich trade is considered data-limited, creating barriers to quantifying the current and future socio-ecological sustainability of the fishery. We present a revised and expanded productivity–susceptibility analysis (PSA) that serves as a holistic risk assessment to estimate the vulnerability of marine aquarium fish to overfishing. Our global analysis includes 306 species that are actively in trade. Improvements to the PSA …

Does Fishery Management For Groupers (Teleostei: Epinephelidae) Protect Them Effectively? Context From The Iucn's Red List Of Threatened Species, Sean T. Fennessy, Christi Linardich, Kevin Rhodes, Joao P. Barreiros, David Pollard, Eloy Sosa-Cordero, Felicia Coleman, Alfonso Aguilar-Perera, Christopher R. Malinowski, Thierry Brulé, Pedro Afonso, Kayan Ma, Min Liu, Muktha Menon, Colin Wen, Stanley K. H. Shea, Sean N. Porter, Matthew Craig, Yvonne Sadovy De Mitcheson

Biological Sciences Faculty Publications

Worldwide, groupers (Epinephelidae) are commercially valued fishes, which also play key ecological roles on tropical and subtropical reefs. In 2007 and 2016, the IUCN's Groupers and Wrasses Specialist Group assessed all 160+ grouper species, with 17 of these being identified as threatened in 2016 and the major threat factor being overexploitation. Our present study aimed to identify whether management measures (MMs) for previously assessed groupers were established, whether these measures aligned with IUCN's Red List categories, and whether they effectively protect grouper populations. Experts in grouper biology and management assigned scores per grouper species based on the extent to which …

Three Decades Of Classifying Threatened Species: Lessons Learned From And About The Iucn Red List Criteria For Quantifying Extinction Risk, H. Resit Akçakaya, E. J. Milner-Gulland, Mike Hoffmann, Helen M. Regan, Ilona Naujokaitis-Lewis, Andre E. Punt, Kevin J. Gaston, David A. Keith, Stuart H. M. Butchart, Simon N. Stuart, Nigel J. Collar, Moreno Di Marco, Monika Bohm, Alex J. Berryman, David P. Mallon, Axel Hochkirch, Nicholas K. Dulvy, Malin Rivers, Thomas M. Brooks, James R. S. Westrip, Jonathan Paul Rodriguez, Craig Hilton-Taylor, Janet Scott, Simon Tarr, Sophie H. Ledger, Christi Linardich

Biological Sciences Faculty Publications

The IUCN Red List of Threatened Species, the most widely used global system for assessing species' extinction risk, has become a foundational source of information for conservation management, policy and research. Since the adoption of quantitative extinction risk criteria more than three decades ago, the Red List has expanded substantially in scope and influence, informing decisions ranging from species conservation and protected area designation to international agreements, corporate risk assessments and global biodiversity indicators. Given its central role, maintaining scientific rigour, transparency and trust in the Red List system is essential. Feedback from users, emerging from evolving applications and scientific …

Mitochondrial Genome Of The Indo-Pacific Mesophotic Coral Leptoseris Columna (Scleractinia: Agariciidae) Assembled Using Pacbio Long-Read Sequencing, Nomita Rani Adhikary, Daniel J. Barshis, J. Antonio Baeza

Biological Sciences Faculty Publications

Leptoseris columna, a mesophotic coral species belonging to the family Agariciidae, is distributed throughout the Indo-Pacific region. This species is considered as of "Least concern" by the IUCN, yet, faces multiple local and global stressors. To support conservation plans, this study sequenced and characterized the complete mitochondrial genome of L. columna. The complete mitochondrial genome of Leptoseris columna was assembled using PacBio long-reads with a coverage of 459× per bp. The AT-rich mitochondrial genome of Leptoseris columna is 18,546 bp long and comprises 13 protein-coding genes (PCGs), 2 transfer RNA genes (trnM and trnW), and 2 ribosomal RNA …

Experiences Of Bukidnon Farmers On The Use Of Carbonized Rice Hulls (Crh) Waste From Biomass Boilers As A Soil Conditioner, Dash Constantine S. Chamen, Queen Loraine D. Ban, Michael Justin O. Eluna, Pole Honson B. Gabitano, Ian Jay P. Saldo, Jhovel Roy D. Calo

Sinaya: A Philippine Journal for Senior High School Teachers and Students

The long-term use of agricultural products that adversely affect soil is a significant issue for farmers. This study explored the potential of carbonized rice hulls (CRH) waste from biomass boilers as a sustainable soil conditioner. The research investigated the specific soil conditioning properties of CRH and explored the lived experiences of nine (9) Bukidnon farmers to correlate their observations with the material’s chemical profile. The composition analysis identified a high silica content and essential micronutrients, such as calcium and magnesium, which act as nutrient restorers and pH regulators. The thematic analysis of semi-structured interviews, four themes emerged to summarize the …

Exploring Ecological Zonation Of The Yellow River Estuary Coastal Zone Based On Nitrogen And Phosphorus Criteria, Dejuan Jiang, Song Qin, Zhengyi Liu, Ruiteng Sun, Xiaoshuai Hang, Tao Zou, Xiaoguang Li, Lijuan Li, Shichao Tian, Yanfang Li, Yongming Luo, Chuanyuan Wang, Yuan Li

Bulletin of Chinese Academy of Sciences (Chinese Version)

Estuaries, as ecologically sensitive brackish water mixing zones, face a critical bottleneck in refined management because traditional zonation based on socioeconomic attributes overlooks the ecological heterogeneity driven by salinity gradients and nutrient stoichiometry, leading to a disconnect between management measures and conservation needs. This study proposes a novel approach to coastal zonation using nitrogen and phosphorus nutrient criteria as an ecological benchmark. Overall ecological criteria are established for the Yellow River estuary (dissolved inorganic nitrogen: 0.258 mg/L; phosphate: 0.015 mg/L) and a differentiated management scheme is constructed based on a salinity gradient (26.5 PSU boundary). It is recommended to integrate …

Long-Term Ecological Research Provides Theoretical And Technical Support For Ecological Restoration And High-Quality Development In Agro-Pastoral Ecotone, Wenming Bai, Cunzheng Wei, Longyu Hou, Linghao Li, Xingguo Han, Wenhao Zhang

Bulletin of Chinese Academy of Sciences (Chinese Version)

Since its establishment in 2001, the Duolun Restoration Ecology Station, Institute of Botany, Chinese Academy of Sciences (Duolun Station) has been dedicated to addressing severe grassland degradation and slow economic development in the agro-pastoral ecotone, north of Beijing. A series of systematic studies were conducted on the degraded grassland ecosystem in the agro-pastoral ecotone of Duolun County, Inner Mongolia. The major research findings are summarized as follows. (1) Elucidated that species-specific trait of plant roots, along with the changes in soil properties, are the primary drivers determining how plant and microbial community structure and function respond to anthropogenic disturbances and …