Natural Resources and Conservation Commons^™

Otoliths Of South-Western Australian Fish: A Photographic Catalogue, Chris Dowling, Kim Smith, Elaine Lek, Joshua Brown

Fisheries Research Reports

Due to the species-specific nature of otoliths and given they are often the only part of the fish preserved when fish die, otolith catalogues can be used in numerous applications, such as diet studies in fish eating animals, including pinnipeds, fish and sea birds; archaeological purposes such as reconstructing indigenous people’s diets from otoliths found in middens or evolutionary history of fish species by comparing fossilized otoliths. Given the unique mixture of subtropical and temperate fish, including many endemic species that occur off the southwest corner of WA having a catalogue for this area is extremely important for people working …

Scaup Depredation On Arkansas Baitfish And Sportfish Aquaculture, Stephen A. Clements, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Lesser scaup (Aythya affinis) and greater scaup (A. marila), hereafter scaup, consume a variety of aquatic invertebrates, plants, and occasionally small fish. Scaup have foraged on commercial aquaculture farms in the southern United States for decades. However, the types, abundance, and rate of fish exploitation by scaup on baitfish and sportfish farms are not well documented. Thus, information is needed to understand how fish and other foods influence scaup use of aquatic resources, and any potential economic effects of depredation of fish. From November–March in winters 2016–2017 and 2017–2018, we conducted 1,458 pond surveys to …

Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay

United States Department of Agriculture Wildlife Services: Staff Publications

In recent years, small unmanned aircraft systems (sUAS) have been used widely to monitor animals because of their customizability, ease of operating, ability to access difficult to navigate places, and potential to minimize disturbance to animals. Automatic identification and classification of animals through images acquired using a sUAS may solve critical problems such as monitoring large areas with high vehicle traffic for animals to prevent collisions, such as animal-aircraft collisions on airports. In this research we demonstrate automated identification of four animal species using deep learning animal classification models trained on sUAS collected images. We used a sUAS mounted with …

Spatial Variation In Direct And Indirect Contact Rates At The Wildlife-Livestock Interface For Informing Disease Management, Anni Yang, Raoul K. Boughton, Ryan S. Miller, Bethany Wight, Wesley M. Anderson, James C. Beasley, Kurt C. Vercauteren, Kim M. Pepin, George Wittemyer

United States Department of Agriculture Wildlife Services: Staff Publications

Little is known about disease transmission relevant contact rates at the wildlife-livestock interface and the factors shaping them. Indirect contact via shared resources is thought to be important but remains unquantified in most systems, making it challenging to evaluate the impact of livestock management practices on contact networks. Free-ranging wild pigs (Sus scrofa) in North America are an invasive, socially-structured species with an expanding distribution that pose a threat to livestock health given their potential to transmit numerous livestock diseases, such as pseudorabies, brucellosis, trichinellosis, and echinococcosis, among many others. Our objective in this study was to quantify …

Plague Exposure In Mammalian Wildlife Across The Western United States, Sarah N. Bevins, Jeffrey C. Chandler, Nicole Barrett, Brandon S. Schmit, Gerald W. Wiscomb, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Plague is caused by a bacterial pathogen (Yersinia pestis) that can infect a wide range of mammal species, but its presence in wildlife is often underappreciated. Using a large-scale data set (n = 44,857) that details the extent of Y. pestis exposure in wildlife, we document exposure in 18 wildlife species, including coyotes (Canis latrans), bobcats (Lynx rufus), and black bears (Ursus americanus). Evidence of plague activity is widespread, with seropositive animals detected in every western state in the contiguous United States. Pathogen monitoring systems in wildlife that are both large scale …

Data-Driven Management—A Dynamic Occupancy Approach To Enhanced Rabies Surveillance Prioritization, Amy J. Davis, Jordana D. Kirby, Richard B. Chipman, Kathleen M. Nelson, Amy T. Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

Rabies lyssavirus (RABV) is enzootic in raccoons across the eastern United States. Intensive management of RABV by oral rabies vaccination (ORV) has prevented its spread westward and shown evidence of local elimination in raccoon populations of the northeastern US. The USDA, Wildlife Services, National Rabies Management Program (NRMP) collaborates with other agencies to implement broad-scale ORV and conducts extensive monitoring to measure the effectiveness of the management. Enhanced Rabies Surveillance (ERS) was initiated during 2005 and updated in 2016 to direct surveillance efforts toward higher-value specimens by assigning points to different methods of encountering specimens for collection (strange-acting, roadkill, surveillance-trapped, …

Sources And Aftermaths Of Pipeline Related Leaks And Spills, Justin Smith

Symposium of Student Scholars

The escape of oil and other hazardous materials have been shown to pollute and destroy ecosystems. As an aspiring chemist, I am adamant about the secure handling and transportation of oil and other hazardous materials. In the past, researchers have concentrated on oil’s high viscosity. Oil’s high viscosity physically smothers wildlife, affecting their ability to continue critical functions such as respiration, feeding, and thermoregulation. My research focuses on the source of these oil spills, as well as natural gas leaks, for the purpose of risk assessment. In addition, I compare recovery efforts based on the cause of the leak/spill, the …

Continental-Scale Network Reveals Cross-Jurisdictional Movements Of Sympatric Sharks With Implications For Assessment And Management, Charlie Huveneers, Yuri Niella, Michael Drew, Rory Mcauley, Paul A. Butcher, Victor Peddemors, Daniela Waltrick, Chris Dowling, Silas Mountford, Ian S. Keay, Matias Braccini

Fisheries Research Articles

Understanding the movement ecology of marine species and connectivity of populations is required for effective fisheries management. This is especially the case for species with wide-ranging distributions for which movement can span across several jurisdictions with different management regulations. We used the Australian national network of acoustic receivers facilitated by the Integrated Marine Observing System (IMOS) to describe the extent and frequency of movements for two large epipelagic shark species, the bronze whaler (Carcharhinus brachyurus) and dusky shark (Carcharhinus obscurus). A total of 210 sharks (117 bronze whalers and 93 dusky sharks) were tracked for a …

A Study Of Adoption And Costs Of Nrcs Avoid, Control, And Trap (Act) Agricultural Conservation Practices In Arkansas, Samuel Edward King

Student Theses and Dissertations

The USDA NRCS provides technical and financial assistance to support farmers and landowners who implement conservation practices through land retirement and cost-share programs. We analyze NRCS cost-shared conservation activities in Arkansas to determine what has been conducted, when it occurred, and what may have led to the adoption of these conservation practices. We investigate temporal trends in conservation adoption based on changes following the 2002 Farm Bill using regression analysis and evaluate spatial hotspots at the HUC-12 watershed scale using the Getis-Ord Gi*. Results suggest that conservation adoption differs regionally by practice type and land use category, and adoptions increase …

Monitoring Agroecosystem Productivity And Phenology At A National Scale: A Metric Assessment Framework, Dawn M. Browning, Eric S. Russell, Guillermo E. Ponce-Campos, Nicole Kaplan, Andrew D. Richardson, Bijan Seyednasrollah, Sheri Spiegal, Nicanor Saliendra, Joseph G. Alfieri, John Baker, Carl Bernacchi, Brandon T. Bestelmeyer, David Bosch, Elizabeth H. Boughton, Raoul K. Boughton, Pat Clark, Gerald Flerchinger, Nuria Gomez-Casanovas, Sarah Goslee, Nick M. Haddad, David Hoover, Abdullah Jaradat, Marguerite Mauritz, Gregory W. Mccarty, Gretchen R. Miller, John Sadler, Amartya Saha, Russell L. Scott, Andrew Suyker, Craig Tweedie, Jeffrey D. Wood, Xukai Zhang, Shawn D. Taylor

School of Natural Resources: Faculty Publications

Effective measurement of seasonal variations in the timing and amount of production is critical to managing spatially heterogeneous agroecosystems in a changing climate. Although numerous technologies for such measurements are available, their relationships to one another at a continental extent are unknown. Using data collected from across the Long-Term Agroecosystem Research (LTAR) network and other networks, we investigated correlations among key metrics representing primary production, phenology, and carbon fluxes in croplands, grazing lands, and crop-grazing integrated systems across the continental U.S. Metrics we examined included gross primary productivity (GPP) estimated from eddy covariance (EC) towers and modelled from the Landsat …

The Economics Of Battery Storage For Residential Solar Customers In Southern California, John B. Broughton, Prashanth U. Nyer, Candace E. Ybarra

Business Faculty Articles and Research

Battery storage coupled with solar panels became a consideration after the original net metering program in California (NEM 1.0) ended and gave way to the current net metering program (NEM 2.0). Under NEM 2.0, battery storage gives customers under time-of-use (TOU) rate plans the ability to store the excess electrical energy generated by their panels during sunlight hours (when electricity usage and resale rates are low) and then use that energy in the evening when rates are significantly higher. This reduces the amount of expensive electricity that the customer would have to purchase from the grid. It is widely expected …

Patterns And Drivers Of Introgression In Louisiana's Largemouth Bass (Micropterus Salmoides) Stocks, Colleen E. Walsh

LSU Master's Theses

In the southeastern U.S., populations of the popular sportfish Largemouth Bass (Micropterus salmoides; LMB) are often stocked with Florida Largemouth Bass (Micropterus salmoides floridanus; FLMB) to develop FLMB ancestry in systems north of its native peninsular Florida range, with the ultimate goal of creating trophy fisheries. Stock enhancement through introgression of FLMB ancestry can increase maximum potential size and growth in receiving populations, potentially through hybrid vigor of intergrade subspecies. We collected 60 fish and habitat data from six Louisiana lakes from 2018-2020 (N=360), quantified level of introgression of FLMB with fragment analysis at 12 microsatellite loci confirmed for subspecific …

Summer To Autumn Population Of Wild Eumaeus Atala On The Ft. Lauderdale Campus Of Nova Southeastern University, Alexandra M. Lens

Mako: NSU Undergraduate Student Journal

Eumaeus atala is an endangered tropical butterfly native to the Caribbean and some parts of Florida, USA. Following population reductions primarily due to habitat loss, E. atala populations are now increasing due to conservation efforts of its cycad host plants, especially Zamia integrifolia (coontie). The purpose of this study was to observe, document, and measure the population of wild E. atala on the Ft. Lauderdale, Florida campus of Nova Southeastern University where landscaping use of host plants supports a natural population of E. atala. Forty-four host plants located in two different sites were observed for 14 weeks. One site …

Effects Of Hunter Movement And Habitat Use On Observation Rate Of White-Tailed Deer (Odocoileus Virginianus), Alyssa N. Meier

Biology Theses, Dissertations, and Student Creative Activity

Hunting by humans is the primary tool for population control for many ungulate species across the United States, including white-tailed deer (Odocoileus virginianus). Previous research has focused primarily on the effects of hunting on prey behavior while neglecting the potential effects hunter behavior has on the probability of harvest success. I examined the influence of hunter movement and habitat use across the landscape on observation rate of white-tailed deer. During the 2008 and 2009 Oklahoma hunting seasons, we recorded GPS and observation data of 83 individual hunters over 487 total hunts. Hunters that moved non-linearly through forested cover at a …

Essays On The Designs And Benefits Of Land Conservation Programs, Badri Khanal

Department of Agricultural Economics: Dissertations, Theses, and Student Research

This dissertation analyzes the policy designs and economic benefits of a land conservation practice called prairie strips. The first chapter investigates the impact of policy designs on individual household preferences. The study measures the value that Iowa residents place on the ecosystem services of prairie strips and determines if that value changes under different policy designs. The policy design treatment varies in who runs the program and who has enrollment priority. The willingness to pay (WTP) for ecosystem services is estimated using stated preferences from a choice experiment. Results indicate significant public support for expanding and funding the prairie strips …

Population Structure Analysis Of The Endangered Oak Quercus Brandegeei, Carolyn Brinckwirth

DePaul Discoveries

As humans continue to impact landscapes and ecosystems throughout the entire world, many plant and animal species have faced major changes in their environments. The rare endemic oak, Quercus brandegeei, is one such endangered species located in the Sierra La Laguna mountains of Baja California Sur, Mexico. This tree occurs solely on the ephemeral riverbeds of the mountains, which are inundated seasonally by hurricane waters. It is important to understand the fundamental characteristics, like spatial distribution, of Q. brandegeei in order to develop restorative management practices to protect this tree against extinction. Determining the geographic distribution of a species …

The Variability Of Seawater Carbonate Chemistry In Two Florida Urban Mangrove Ecosystems, Alexandrina R. Rangel

All HCAS Student Capstones, Theses, and Dissertations

Anthropogenic carbon dioxide (CO₂) emissions into the atmosphere are yielding serious impacts across the world’s ocean, including ocean acidification, sea level rise, and increasing seawater temperature. However, these changes are not occurring uniformly across all marine ecosystems. Coastal ecosystems, such as mangroves, already experience extreme and variable environmental conditions due to natural biogeochemical and physical processes. The goal of this study was to document small-scale variability in two urban mangrove ecosystems to gain insight into how ocean acidification will manifest within these systems. Using a stand-up paddleboard, a suite of sensors, and traditional bottle sampling techniques, we measured …

Invader Removal Triggers Competitive Release In A Threatened Avian Predator, J. David Wiens, Katie M. Dugger, J. Mark Higley, Damon B. Lesmeister, Alan B. Franklin, Keith A. Hamm, Gary C. White, Krista E. Dilione, David C. Simon, Robin R. Bown, Peter C. Carlson, Charles B. Yackulic, James D. Nichols, James E. Hines, Raymond J. Davis, David W. Lamphear, Christopher Mccafferty, Trent L. Mcdonald, Stan G. Sovern

United States Department of Agriculture Wildlife Services: Staff Publications

Changes in the distribution and abundance of invasive species can have far-reaching ecological consequences. Programs to control invaders are common but gauging the effectiveness of such programs using carefully controlled, large-scale field experiments is rare, especially at higher trophic levels. Experimental manipulations coupled with long-term demographic monitoring can reveal the mechanistic underpinnings of interspecific competition among apex predators and suggest mitigation options for invasive species. We used a large-scale before-after control-impact removal experiment to investigate the effects of an invasive competitor, the barred owl (Strix varia), on the population dynamics of an iconic old-forest native species, the northern spotted owl …

An Evaluation Of The Central Coast Rangeland Coalition: Trust And Other Factors Important For Collaborative Conservation, Dustin Tran

Master of Science in Environmental Sciences and Management Projects

The proliferation of collaborative partnerships across the western United States and the lack of tools and protocols to evaluate them have been well documented. As the number and types (conservation-based, policy actions, information sharing) of collaboratives rises, there is a need for research that aims to evaluate these partnerships' performance and collaborative process considering their importance and potential to solve complex ecological, economic, and social problems. This study aims to contribute to this pool of research by interviewing the Steering Committee (SC) members of the Central Coast Rangeland Coalition (CCRC), a volunteer-based and information-sharing rangeland collaborative coalition. We evaluate and …

Spatial Variability Of Nonpoint Source Yields In Ozark Highlands Watersheds Under Historical And Recent Land Use Conditions, Tyler J. Pursley

Graduate Theses/Dissertations

Many of the environmental problems facing communities today stem from historical as well as present land use disturbances related to agriculture, urbanization, and resource extraction. It is important to evaluate a range of land use and soil effects on nonpoint source (NPS) pollution to fully understand land use-water quality relationships. The Ozark Highlands region has undergone significant phases of land use change throughout its settlement history and is actively developing today (2020). This study used nonpoint nitrogen (TN), phosphorus (TP), and sediment (TSS) yields predicted by the US EPA’s Spreadsheet Tool for Estimating Pollutant Loads (STEPL) model to evaluate human …

Social And Ecological Correlates Of Avian Infection By Haemosporidian Blood Parasites, Ian R. Hoppe

School of Natural Resources: Dissertations, Theses, and Student Research

Haemosporidian parasites are a significant source of morbidity and mortality for birds. There is growing recognition of the negative consequences of haemosporidian infections for wild birds at individual and population levels. Avian haemosporidians are geographically widespread, have been detected from a phylogenetically diverse array of hosts, and have been the focus of extensive research due to their impacts on birds and their similarity to vector-borne diseases of humans. However, factors influencing haemosporidian transmission, especially transmission between species, are poorly understood. To better understand these influences, we compared prevalence and diversity of haemosporidian blood parasite infections among species in a behaviorally …

Ichthyofaunal Utilization Of A Man-Made Salt Marsh Creak In Mission Bay, California, 25 Years After Creation, Maria Angst

McNair Summer Research Program

Southern California’s wetlands are drastically declining due to human activities. Increasingly, marsh restoration and creation are being used to mitigate such losses. This study used minnow traps to resample the ichthyofauna of a created marsh (Crown Point Mitigation Site; CPMS) and an adjacent natural marsh (Kendall Frost) in Mission Bay, California, 26 years following the marsh creation. These data were compared to data collected from 1995-1998, immediately after marsh creation. Fishes trapped included Fundulus parvipinnis, Gillichthys mirabilis, Ctenogobius sagittula, Atherinops affinis, and Mugil cephalus. Species richness and dominance measures were higher in the natural relative to the created marsh. The …

Nicarbazin As An Oral Contraceptive In Eared Doves, Lourdes Olivera, Silvia Pereyra, Georgget Banchero, Guillermo Tellechea, Jorge Sawchik, Michael L. Avery, Ethel Rodríguez

United States Department of Agriculture Wildlife Services: Staff Publications

Eared doves (Zenaida auriculata) are responsible for substantial losses in cereal and oil crops as well as in dairy and feedlot production in the southern cone of South America. Various strategies have been shown to be effective in reducing damage at the farm scale, but in some scenarios, it is necessary to also incorporate population control methods due to excessive bird population size. An alternative approach to reduce pest bird populations is the use of contraceptive methods, minimizing the impact on the environment and non-target populations. Nicarbazin is registered in the United States as a contraceptive for Branta …

Avian Influenza A Virus Susceptibility, Infection, Transmission, And Antibody Kinetics In European Starlings, Jeremy W. Ellis, J. Jeffrey Root, Loredana M. Mccurdy, Kevin T. Bentler, Nicole L. Barrett, Kaci K. Vandalen, Katherine L. Dirsmith, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAVs) pose risks to public, agricultural, and wildlife health. Bridge hosts are spillover hosts that share habitat with both maintenance hosts (e.g., mallards) and target hosts (e.g., poultry). We conducted a comprehensive assessment of European starlings (Sturnus vulgaris), a common visitor to both urban and agricultural environments, to assess whether this species might act as a potential maintenance or bridge host for IAVs. First, we experimentally inoculated starlings with a wild bird IAV to investigate susceptibility and replication kinetics. Next, we evaluated whether IAV might spill over to starlings from sharing resources with a …

Mesopredator Frugivory Has No Effect On Seed Viability And Emergence Under Experimental Conditions, John P. Draper, Trisha B. Atwood, Noelle G. Beckman, Karin M. Kettenring, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Members of the order Carnivora are a unique and important seed disperser who consume and deposit undamaged seeds while providing regular long-distance seed dispersal opportunities. Some members of Carnivora, such as coyotes (Canis latrans), are undergoing range expansions which may help the plant species they consume colonize new locations or replace dispersal services provided by recently extirpated species. In this study, we evaluated aspects of the seed dispersal effectiveness of coyotes and gut passage time to determine the potential dispersal distances for three commonly consumed and commonly occurring plant species (Amelanchier alnifolia, Celtis ehrenbergiana, and Juniperus osteosperma). We also investigated …

Polycyclic Aromatic Hydrocarbons And The Microbiomes Of Two Benthic Species, Samantha Ells

Master's Theses

The presence of oil has been shown to affect the microbiomes of the water column, sediments, and organisms, both by altering the diversity and the composition of those microbial communities. If the microbiome is altered it may no longer provide benefits to its host organism, impacting its ability to survive. Thus, it is important to understand the effects of large-scale contamination events including the Deepwater Horizon oil spill. This study set out to examine the effects of oil exposure on the microbiome of two benthic species, southern flounder (Paralichthys lethostigma) and eastern oysters (Crassostrea virginica) to further understand the effects …

Climate Adaptation And Water Conservation Decision-Making In Paso Robles, California Vineyards, Christopher R. Klier

Master's Theses

This paper examines vineyard perceptions and adoption of climate change adaptation and water conservation measures in the Paso Robles American Viticultural Area (AVA). A survey was distributed to all 220 vineyards and vineyard management companies that operate in the AVA, with a 53.64% response rate. The objective of the survey was to determine vineyard manager and owner attitudes towards climate change and adaptation, as well as their perceptions of how these threats would impact their operation. A second objective was to document the current level of water conservation and climate adaptation while identifying the barriers and opportunities for further adoption …

Pacific Black Duck Ecology And Habitat Assessment In Aunu'u, American Samoa, And Their Relationship To Other Mallard-Like Ducks Of Oceania, Greater Indonesia, And The Philippines, Marissa Kaminski

Open Access Theses & Dissertations

Determining a species’ ecological needs, assessing the quality of their habitat, and determining genetic differentiation and connectivity among populations is essential to their conservation. My dissertation focuses on obtaining such a holistic view for a population of Pacific Black Ducks recently established on the Island of Aunu’u, American Samoa. Specifically, I present the first evaluation of the ecology and habitat of a recently established population of Pacific Black Ducks on the Island of Aunu’u, American Samoa, in Chapter 1, while I assess the genetic connectivity and relationship of this population to other Mallard-like ducks found in Greater Indonesia, Oceania, and …

Site Selection For Coral Reef Restoration Using Airborne Imaging Spectroscopy, Steven R. Schill, Gregory P. Asner, Valerie Pietsch Mcnulty, F. Joseph Pollock, Aldo Croquer, Nicholas R. Vaughn, Ximena Escovar-Fadul, George Raber, Elizabeth Shaver

Faculty Publications

Over the past decade, coral restoration efforts have increased as reefs continue to decline at unprecedented rates. Identifying suitable coral outplanting locations to maximize coral survival continues to be one of the biggest challenges for restoration practitioners. Here, we demonstrate methods of using derivatives from imaging spectroscopy from the Global Airborne Observatory (GAO) to identify suitable coral outplant sites and report on the survival rates of restored coral at those sites. Outplant sites for a community-based, citizen science outplant event in Bávaro, Dominican Republic, were identified using expert-defined criteria applied to a suitability model from data layers derived from airborne …

Right Side Up: Payment For Ecosystem Services On Privately Owned Grasslands In Nebraska, Kyle Martens

School of Natural Resources: Dissertations, Theses, and Student Research

Grasslands are an important ecological and economic resource in the United States. As part of a natural system, these landscapes can provide income for ranching operations and employment in rural communities; habitat for grassland plants, animals, and migratory species; and offer other services not always readily observed such as improved soil health, clean water, and carbon sequestration. Despite the overarching benefits, the conversion of grasslands to other uses remains widespread throughout much of the remaining Great Plains ecosystem.

Shifting from livestock ranching to another land use often reflects a tipping point. This occurs when the alternative land use is perceived …