Natural Resources and Conservation Commons^™

Male Burmese Pythons Follow Female Scent Trails And Show Sex-Specific Behaviors, Shannon A. Richard, Eric A. Tillman, John S. Humphrey, Michael L. Avery, M. Rockwell Parker

United States Department of Agriculture Wildlife Services: Staff Publications

Animals communicate with potential mates using species-specific signals, and pheromones are powerful sexual signals that modify conspecific behavior to facilitate mate location. Among the vertebrates, snakes are especially adept in mate searching via chemical trailing, which is particularly relevant given that many snake species are invasive outside their native ranges. Chemical signals used in mate choice are, thus, potentially valuable tools for management of invasive snake species. The Burmese python (Python bivittatus) is an invasive snake in the Florida Everglades where it is negatively impacting native fauna. In this study, we sought to: (i) determine if males can follow conspecific …

Variation In Host Home Range Size Decreases Rabies Vaccination Effectiveness By Increasing The Spatial Spread Of Rabies Virus, Katherine M. Mcclure, Amy T. Gilbert, Richard B. Chipman, Erin E. Rees, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. Animal movement influences the spatial spread of directly transmitted wildlife disease through host-host contact structure. Wildlife disease hosts vary in home range- associated foraging and social behaviours, which may increase the spread and intensity of disease outbreaks. The consequences of variation in host home range movement and space use on wildlife disease dynamics are poorly understood, but could help to predict disease spread and determine more effective disease management strategies.
2. We developed a spatially explicit individual-based model to examine the effect of spatiotemporal variation in host home range size on the spatial spread rate, persistence and incidence of rabies virus …

Influence Of Land Cover And Soil Moisture Based Brown Ocean Effect On An Extreme Rainfall Event From A Louisiana Gulf Coast Tropical System, Udaysankar S. Nair, Eric Rappin, Emily Foshee, Warren Smith, Roger A. Pielke Sr., Rezaul Mamood, Jonathan L. Case, Clay B. Blankenship, Marshall Shepherd, Joseph A. Santanello, Dev Niyogi

School of Natural Resources: Faculty Publications

Extreme flooding over southern Louisiana in mid-August of 2016 resulted from an unusual tropical low that formed and intensified over land. We used numerical experiments to highlight the role of the ‘Brown Ocean’ effect (where saturated soils function similar to a warm ocean surface) on intensification and it’s modulation by land cover change. A numerical modeling experiment that successfully captured the flood event (control) was modified to alter moisture availability by converting wetlands to open water, wet croplands, and dry croplands. Storm evolution in the control experiment with wet antecedent soils most resembles tropical lows that form and intensify over …

Changes In Students’ Mental Models From Computational Modeling Of Gene Regulatory Networks, Joseph Dauer, Heather E. Bergan-Roller, Gretchen P. King, Mckenzie Kjose, Nicholas J. Galt, Tomáš Helikar

School of Natural Resources: Faculty Publications

Background: Computational modeling is an increasingly common practice for disciplinary experts and therefore necessitates integration into science curricula. Computational models afford an opportunity for students to investigate the dynamics of biological systems, but there is significant gap in our knowledge of how these activities impact student knowledge of the structures, relationships, and dynamics of the system. We investigated how a computational modeling activity affected introductory biology students’ mental models of a prokaryotic gene regulatory system (lac operon) by analyzing conceptual models created before and after the activity.

Results: Students’ pre-lesson conceptual models consisted of provided, system-general structures (e.g., activator, repressor) …

Food Habits Of Coyotes (Canis Latrans) In The Valles Caldera National Preserve, New Mexico, Suzanne J. Gifford, Eric M. Gese, Robert R. Parmenter

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife managers needed to understand coyote (Canis latrans) ecology in order to develop management plans on the nascent Valles Caldera National Preserve in northern New Mexico. Managers concerned about low elk (Cervus elaphus) recruitment had observed an increase in sightings of coyotes and observations of coyote predation on elk calves. Our objective was to identify and quantify coyote diet, and assess the temporal variation in coyote diet on the Valles Caldera National Preserve, particularly as related to elk calf consumption. We examined coyote food habits using 1,385 scats analyzed monthly from May 2005 to November 2008. …

Retrospective Tillage Differentiation Using The Landsat-5 Tm Archive With Discriminant Analysis, Sonisa Sharma, Kundan Dhakal, Pradeep Wagle, Ayse Kilie

School of Natural Resources: Faculty Publications

Accurate and site-specific information on tillage practice is vital to understand the impacts of crop management on water quality, soil conservation, and soil carbon sequestration. Remote sensing is a cost-effective technique for surveillance and rapid assessment of tillage practice over large areas. A new empirical approach for accurately predicting tillage class using discriminant analysis (DA) on historical multitemporal Landsat-TM 5 imagery has been developed. Ground truth data were obtained from the USDA-NRCS at 48 locations (20 conventional till [CT] and 28 conservation tillage or no-till [NT]). Classification accuracies were obtained for the DA models using reflectance values of Landsat-5 TM …

Comparison Of Extraction Methods For Recovering Ancient Microbial Dna From Paleofeces, Richard Hagan, Courtney A. Hofman, Alexander Hübner, Karl Reinhard, Stephanie Schnorr, Cecil M. Lewis, Jr., Krithivasan Sankaranarayanan, Christina G. Warinner

School of Natural Resources: Faculty Publications

Objectives: Paleofeces are valuable to archeologists and evolutionary biologists for their potential to yield health, dietary, and host information. As a rich source of preserved biomolecules from host-associated microorganisms, they can also provide insights into the recent evolution and changing ecology of the gut microbiome. How- ever, there is currently no standard method for DNA extraction from paleofeces, which combine the dual challenges of complex biological composition and degraded DNA. Due to the scarcity and relatively poor preservation of paleofeces when compared with other archeological remains, it is important to use efficient methods that maximize ancient DNA (aDNA) recovery while …

Impact Of The Human Footprint On Anthropogenic Mortality Of North American Reptiles, Jacob E. Hill, Travis L. Devault, Jerrold L. Belant

United States Department of Agriculture Wildlife Services: Staff Publications

Human activities frequently result in reptile mortality, but how direct anthropogenic mortality compares to natural morality has not been thoroughly investigated. There has also been a limited examination of how anthropogenic reptile mortality changes as a function of the human footprint. We conducted a synthesis of causespecific North American reptile mortality studies based on telemetry, documenting 550 mortalities of known cause among 2461 monitored individuals in 57 studies. Overall 78% of mortality was the result of direct natural causes, whereas 22% was directly caused by humans. The single largest source of mortality was predation, accounting for 62% of mortality overall. …

Understanding Factors Related To Undergraduate Student Decision-Making About A Complex Socio-Scientific Issue: Mountain Lion Management, Ashley Alred, Jenny Dauer

School of Natural Resources: Faculty Publications

We outline an instructional strategy for supporting students’ science literacy skills using a structured decision-making tool in an interdisciplinary undergraduate course. Instructional tools support basing complex socioscientific issues decisions on a reasoned analysis of tradeoffs among multiple conflicting values rather than heuristics, such as social norms. We explored the factors related to students’ decision-making about mountain lion management by examining if students’ value orientations, identity, or knowledge predicted their management decisions before, during, and after engaging in structured decision-making where they performed a tradeoffs analysis. We found that student decision-making may align more closely to students’ value orientations and identity …

Effect Of Foliar Spray Application Of Zinc Oxide Nanoparticles On Quantitative, Nutritional, And Physiological Parameters Of Foxtail Millet (Setaria Italica L.) Under Field Conditions, Marek Kolenčík, Dávid Ernst, Matej Komár, Martin Šebesta, Martin Urík, Edmund Dobročka, Ivan Černý, Ramakanth Illa, Raghavendra Kanike, Qian Yu, Huan Feng, Denisa Orlová, Gabriela Kratošová

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

It has been shown that the foliar application of inorganic nano-materials on cereal plants during their growth cycle enhances the rate of plant productivity by providing a micro-nutrient source. We therefore studied the effects of foliarly applied ZnO nanoparticles (ZnO NPs) on Setaria italica L. foxtail millet’s quantitative, nutritional, and physiological parameters. Scanning electron microscopy showed that the ZnO NPs have an average particle size under 20 nm and dominant spherically shaped morphology. Energy dispersive X-ray spectrometry then confirmed ZnO NP homogeneity, and X-ray diffraction verified their high crystalline and wurtzite-structure symmetry. Although plant height, thousand grain weight, and grain …

Rabies Surveillance Identifies Potential Risk Corridors And Enables Management Evaluation, Amy J. Davis, Kathleen M. Nelson, Jordana D. Kirby, Ryan M. Wallace, Xiaoyue Ma, Kim M. Pepin, Richard B. Chipman, Amy Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

Intensive efforts are being made to eliminate the raccoon variant of rabies virus (RABV) from the eastern United States and Canada. The United States Department of Agriculture (USDA) Wildlife Services National Rabies Management Program has implemented enhanced rabies surveillance (ERS) to improve case detection across the extent of the raccoon oral rabies vaccination (ORV) management area. We evaluated ERS and public health surveillance data from 2006 to 2017 in three northeastern USA states using a dynamic occupancy modeling approach. Our objectives were to examine potential risk corridors for RABV incursion from the U.S. into Canada, evaluate the effectiveness of ORV …

Data Of Soil, Vegetation And Bird Species Found On Double-Crested Cormorant Colonies In The Southeastern United States, Leah Moran Veum, Brian S. Dorr, Katie Hanson-Dorr, R. J. Moore, Scott A. Rush

United States Department of Agriculture Wildlife Services: Staff Publications

This data article provides the methods and procedures followed to collect and analyse soil, vegetation and bird data on three different treatment islands in Guntersville Reservoir, Alabama. Samples were collected from randomly selected plot points from islands that were placed into three different treatment types: Colony (currently occupied by Double-crested Cormorants) (Phalacrocorax auritus; n 1⁄4 5), Historic (historically occupied by cormorants and currently abandoned; n 1⁄4 3) and Reference (never occupied by cormorants; n 1⁄4 4). We compared vegetation and tree metrics such as structure and diversity, as well as soil chemistry and bird diversity and communities among islands within …

Reproductive Parameters And Female Breeding Season Survival Of Rio Grande Wild Turkeys In South Central Texas, Jacob White

LSU Master's Theses

Historically, Rio Grande wild turkeys in south central Texas have been at lower densities than other portions of the state. Within the Oak-Prairie Wildlife District of Texas, Rio Grande wild turkey regulatory restrictions are different for counties in the eastern and western portions of the ecoregion. Due to perceived increases in turkey density in the eastern portion of the ecoregion (hereafter 1-bird zone), Texas Parks and Wildlife Department (TPWD) considered increasing the bag limit to match counties in the western portion of the district (hereafter 4-bird zone) in order to increase hunting opportunities. However, if regulatory changes are to be …

Robust Observations Of Land-To-Atmosphere Feedbacks Using The Information Flows Of Fluxnet, Tobias Gerken, Benjamin L. Ruddell, Rong Yu, Paul C. Stoy, Darren T. Drewry

School of Natural Resources: Faculty Publications

Feedbacks between atmospheric processes like precipitation and land surface fluxes including evapotranspiration are difficult to observe, but critical for understanding the role of the land surface in the Earth System. To quantify global surface-atmosphere feedbacks we use results of a process network (PN) applied to 251 eddy covariance sites from the LaThuile database to train a neural network across the global terrestrial surface. There is a strong land–atmosphere coupling between latent (LE) and sensible heat flux (H) and precipitation (P) during summer months in temperate regions, and between H and P during winter, whereas tropical rainforests show little coupling seasonality. …

Resilience Reconciled, Craig R. Allen, David G. Angeler, Brian C. Chaffin, Dirac Twidwell, Ahjond Garmestani

School of Natural Resources: Faculty Publications

Resilience scholarship continues to inspire opaque discourse and competing frameworks often inconsistent with the complexity inherent in social–ecological systems. We contend that competing conceptualizations of resilience are reconcilable, and that the core theory is useful for navigating sustainability challenges.

Resilience as a scientific concept exploded in the early 2000s and is now being adopted by a range of disciplines and by a wide diversity of actors, from city planners to networks of global protectedarea managers. Resilience concepts are now integrated within national and international calls for proposals, research initiatives and centres in both the biophysical and social sciences. However, resilience …

Drought Early Warning And The Timing Of Range Managers’ Drought Response, Tonya R. Haigh, Jason A. Otkin, Anthony Mucia, Michael Hayes, Mark E. Burbach

School of Natural Resources: Faculty Publications

'e connection between drought early warning information and the timing of rangeland managers’ response actions is not well understood. 'is study investigates U.S. Northern Plains range and livestock managers’ decision-making in response to the 2016 flash drought, by means of a postdrought survey of agricultural landowners and using the Protective Action Decision Model theoretical framework. 'e study found that managers acted in response to environmental cues, but that their responses were significantly delayed compared to when drought conditions emerged. External warnings did not influence the timing of their decisions, though on-farm monitoring and assessment of conditions did. 'ough this case …

The Tail Wagging The Dog: Positive Attitude Towards Livestock Guarding Dogs Do Not Mitigate Pastoralists’ Opinions Of Wolves Or Grizzly Bears, Daniel Kinka, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

While the re-establishment of grizzly bears (Ursus arctos) and wolves (Canis lupus) in the American West marks a success for conservation, it has been contentious among pastoralists. Coincidentally, livestock guarding dogs (LGDs; Canis familiaris) have been widely adopted by producers of domestic sheep (Ovis aries) in the United States to mitigate livestock depredation by wild carnivores. We surveyed pastoralists to measure how experience with and attitudes towards LGDs related to attitudes towards livestock predators, and found positive responses regarding LGDs and negative responses regarding wolves and grizzly bears. The more respondents agreed that LGDs reduce the need for lethal management …

Avian Taxonomic And Functional Diversity In Early Stage Of Longleaf Pine (Pinus Palustris) Stands Restored At Agricultural Lands: Variations In Scale Dependency, Myung-Bok Lee, Brian J. Gates, Robert J. Cooper, John P. Carroll

School of Natural Resources: Faculty Publications

In agricultural landscapes, the Longleaf Pine Initiative (LLPI) and the Bobwhite Quail Initiative (BQI) aim to restore longleaf pine forests and early successional habitats, respectively. The early stage of longleaf pine stands and grass and forb vegetation produced by a combination of both restoration programs (LLPI-BQI) may form habitat conditions favorable to early successional bird species and other birds, increasing avian diversity. We investigated how the LLPI and BQI programs affected taxonomic and functional diversity of birds and abundance of early successional birds (grassland and scrub/shrub species), and what environmental characteristics were associated with the diversity and abundance of birds. …

Untapped Capacity For Resilience In Environmental Law, Ahjond Garmestani, J. B. Ruhl, Brian C. Chaffin, Robin K. Craig, Helena F.M.W. Van Rijswick, David G. Angeler, Carl Folke, Lance Gunderson, Dirac Twidwell, Craig R. Allen

School of Natural Resources: Faculty Publications

Over the past several decades, environmental governance has made substantial progress in addressing environmental change, but emerging environmental problems require new innovations in law, policy, and governance. While expansive legal reform is unlikely to occur soon, there is untapped potential in existing laws to address environmental change, both by leveraging adaptive and transformative capacities within the law itself to enhance socialecological resilience and by using those laws to allow socialecological systems to adapt and transform. Legal and policy research to date has largely overlooked this potential, even though it offers a more expedient approach to addressing environmental change than waiting …

The Changing Role Of Rodenticides And Their Alternatives In The Management Of Commensal Rodents, Gary Witmer

United States Department of Agriculture Wildlife Services: Staff Publications

Rodents cause substantial damage and losses of foodstuffs around the world. They also transmit many diseases to humans and livestock. While various methods are used to reduce damage caused by rodents, rodenticides remain an important tool in the toolbox. However, like all tools, rodenticides have advantages and disadvantages. Several considerations are shaping the future of rodenticide use, including manufacturing and registration costs, concern about toxicity levels and nontarget animal hazards, potential hazards to children, reduced effectiveness of some formulations, and humaneness to the targeted rodents. Many of these disadvantages apply to anticoagulant rodenticides, and their use is being more restricted …

Rangeland Management During Drought: Assessing Social–Ecological And Cognitive Indicators Of Ranchers’ Adaptive Capacity, Tonya Haigh

School of Natural Resources: Dissertations, Theses, and Student Research

Rangeland managers face challenges to adapt to climate extremes, and research is needed on how to support their adaptive capacity for managing climate risk. This study evaluates adaptive capacity using an integrated vulnerability and resilience conceptual model and three cognitive behavioral models. Overarching research questions focus on the relationship between protective action and impacts and the best predictors of taking action in response to drought. Three studies address these questions, using quantitative data collected from two post-drought surveys of rangeland-based livestock managers in the Northern Great Plains of the U.S. The studies find evidence of the roles of social-ecological sources …

Tracking Canada Geese Near Airports: Using Spatial Data To Better Inform Management, Ryan Askren, Brett E. Dorak, Heath M. Hagy, Michael W. Eichholz, Brian E. Washburn, Michael P. Ward

United States Department of Agriculture Wildlife Services: Staff Publications

The adaptation of birds to urban environments has created direct hazards to air transportation with the potential for catastrophic incidents. Bird–aircraft collisions involving Canada geese (Branta canadensis; goose) pose greater risks to aircraft than many bird species due to their size and flocking behavior. However, information on factors driving movements of geese near airports and within aircraft arrival/departure areas for application to management are limited. To address this need, we deployed 31 neck collar-mounted global positioning system transmitters on Canada geese near Midway International Airport in Chicago, Illinois, USA during November 2015 to February 2016. We used the movement data …

Effectiveness Of Snap And A24-Automated Traps And Broadcast Anticoagulant Bait In Suppressing Commensal Rodents In Hawaii, Aaron B. Shiels, Tyler Bogardus, Jobriath Rohrer, Kapua Kawelo

United States Department of Agriculture Wildlife Services: Staff Publications

Commensal rodents (invasive rats, Rattus spp.; house mice, Mus musculus) are well established globally. They threaten human health by disease transfer and impact economies by causing agricultural damage. On island landscapes, they are frequent predators of native species and affect biodiversity. To provide managers with better information regarding methods to suppress commensal rodent populations in remote island forests, in 2016 we evaluated the effectiveness of continuous rat trapping using snap-traps, Goodnature® A24 self-resetting rat traps, and a 1-time (2-application) hand-broadcast of anticoagulant rodenticide bait pellets (Diphacinone-50) applied at 13.8 kg/ha per application in a 5-ha forest on Oahu, Hawaii, USA. …

Application Strategy For An Anthraquinonebased Repellent And The Protection Of Soybeans From Canada Goose Depredation, Scott J. Werner, Matthew Gottlob, Charles D. Dieter, Joshua D. Stafford

United States Department of Agriculture Wildlife Services: Staff Publications

Agricultural crops can sustain extensive damage caused by Canada geese (Branta canadensis) when these crops are planted near wetlands or brood-rearing sites. From 2000 to 2015, South Dakota Game, Fish and Parks spent >$5.6 million to manage damages caused by Canada geese to agricultural crops (primarily soybeans) in South Dakota, USA. For the purpose of developing a repellent application strategy for nonlethal goose damage management, we comparatively evaluated the width of anthraquinone applications (i.e., 9.4 L Flight Control® Plus goose repellent/ha [active ingredient: 50% 9,10-anthraquinone] at 0–36 m versus 0–73 m perpendicular to the edge of wetlands in 2014), the …

A Review Of Rat Lungworm Infection And Recent Data On Its Definitive Hosts In Hawaii, Chris Niebuhr, Susan I. Jarvi, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

Rat lungworm (Angiostrongylus cantonensis) is a zoonotic nematode that causes rat lungworm disease (angiostrongyliasis), a potentially debilitating form of meningitis, in humans worldwide. The definitive hosts for rat lungworm are primarily members of the genus Rattus, with gastropods as intermediate hosts. This parasite has emerged as an important public health concern in the United States, especially in Hawaii, where the number of human cases has increased in the last decade. Here we discuss the current knowledge of the rat lungworm, including information on the life cycle and host species, as well as updates on known infection levels. Three species of …

Estimating Waterbird Abundance On Catfish Aquaculture Ponds Using An Unmanned Aerial System, Paul C. Burr, Sathishkumar Samiappan, Lee A. Hathcock, Robert J. Moorhead, Brian S. Dorr

United States Department of Agriculture Wildlife Services: Staff Publications

In this study, we examined the use of an unmanned aerial system (UAS) to monitor fish-eating birds on catfish (Ictalurus spp.) aquaculture facilities in Mississippi, USA. We tested 2 automated computer algorithms to identify bird species using mosaicked imagery taken from a UAS platform. One algorithm identified birds based on color alone (color segmentation), and the other algorithm used shape recognition (template matching), and the results of each algorithm were compared directly to manual counts of the same imagery. We captured digital imagery of great egrets (Ardea alba), great blue herons (A. herodias), and doublecrested cormorants (Phalacrocorax auritus) on aquaculture …

Economic And Livestock Health Impacts Of Birds On Dairies: Evidence From A Survey Of Washington Dairy Operators, Julie L. Elser, Amber L. Adams Progar, Karen M.M. Steensma, Tyler P. Caskin, Susan R. Kerr, Stephanie A. Shwiff

United States Department of Agriculture Wildlife Services: Staff Publications

The survey described in this research paper aimed to investigate the economic and health impacts of birds on dairies. Birds are common pests on dairies, consuming and contaminating feed intended for cattle. As a result, dairy operators experience increased feed costs and increased pathogen and disease risk. We surveyed dairy operators attending the 2017 Washington Dairy Conference to examine the impact of birds on dairies in Washington State. Dairy operators reported feed losses valued at $55 per cow resulting in annual losses totaling $5.5 million in the Western region of the state and $9.2 million in the Eastern region of …

Double-Crested Cormorant Colony Effects On Soil Chemistry, Vegetation Structure And Avian Diversity, Leah Moran Veum, Brian S. Dorr, Katie C. Hanson-Dorr, R.J. Moore, Scott A. Rush

United States Department of Agriculture Wildlife Services: Staff Publications

Effects of Double-crested Cormorants (Phalacrocorax auritus) on vegetation, soil chemistry and tree health have been documented from their breeding colonies in the northern breeding grounds of Canada and the United States (U.S.) but not for areas within the southeastern United States where breeding activity is relatively novel. We compared vegetation and tree metrics such as structure diversity, and soil chemistry among colony islands, uninhabited islands, and abandoned colony islands within Guntersville Reservoir, a temperate forest ecosystem. Avian diversity and community structure were also quantified on these islands. Concentrations of potassium (K), phosphorus (P) and nitrate (NO3 −) in soil were …

Abundance Estimation From Multiple Data Types For Groupliving Animals: An Example Using Dhole (Cuon Alpinus), Dusit Ngoprasert, George A. Gale, Andrew J. Tyre

School of Natural Resources: Faculty Publications

Large carnivores are declining globally and require baseline population estimates for management, however large-scale population estimation is problematic for species without unique natural marks. We used camera trap records of dhole Cuon alpinus, a group-living species, from three national parks in Thailand as a case study in which we develop integrated likelihood models to estimate abundance incorporating two different data sets, count data and detection/non-detection data. We further investigated relative biases of the models using different proportions of data with lower versus higher quality and assessed parameter identifiability. The simulations indicated that the relative bias on average across 24 tested …

Stakeholders’ Perceptions Of Geographical Criteria For Loblolly Pine Management For Bioenergy Production In Virginia, Meghann Smith, Gia Nguyen, Taylor Wieczerak, Bernabas Wolde, Pankaj Lal, John Munsell

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

This study analyzed the perceptions of four stakeholder groups (forest landowners, private forest consultants, forest management researchers or educators, and federal or state agency foresters), regarding their management practices and preferred geographic growing conditions of loblolly pine in Virginia by combining AHP (analytical hierarchy process) and regression modeling. By ranking the importance of different geographical conditions for managing loblolly pine, we aimed to identify ways to support loblolly growth as a potential feedstock for biofuel generation. We achieved this through collecting survey responses from 43 stakeholders during the 2019 Virginia Forestry Summit. The results showed that the landowner, researcher/educator, and …