Soil Science Commons^™

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …

Vasoactivity And Vasoconstriction Changes In Cattle Related To Time Off Toxic Endophyte-Infected Tall Fescue, James L. Klotz, Glen E. Aiken, Jessica R. Bussard, Andrew P. Foote, David L. Harmon, Ben M. Goff, F. Neal Schrick, James R. Strickland

Plant and Soil Sciences Faculty Publications

Previous research has indicated that serotonergic and α-adrenergic receptors in peripheral vasculature are affected by exposure of cattle grazing toxic endophyte-infected (E+; Epichlöe coenophialia) tall fescue (Lolium arundinaceum). The objective of this experiment was to determine the period of time necessary for the vascular effects of ergot alkaloids to subside. Two experiments were conducted to investigate changes in vascular contractile response and vasoconstriction over time relative to removal from an ergot alkaloid-containing E+ tall fescue pasture. In Experiment 1, lateral saphenous vein biopsies were conducted on 21 predominantly Angus steers (357 ± 3 kg body weight) at …

Methane Emissions From Global Rice Fields: Magnitude, Spatiotemporal Patterns, And Environmental Controls, Bowen Zhang, Hanqin Tian, Wei Ren, Bo Tao, Chaoqun Lu, Jia Yang, Kamaljit Banger, Shufen Pan

Plant and Soil Sciences Faculty Publications

Given the importance of the potential positive feedback between methane (CH₄) emissions and climate change, it is critical to accurately estimate the magnitude and spatiotemporal patterns of CH₄ emissions from global rice fields and better understand the underlying determinants governing the emissions. Here we used a coupled biogeochemical model in combination with satellite-derived contemporary inundation area to quantify the magnitude and spatiotemporal variation of CH₄ emissions from global rice fields and attribute the environmental controls of CH₄ emissions during 1901–2010. Our study estimated that CH₄ emissions from global rice fields varied from 18.3 ± …

Quantifying Peat Carbon Accumulation In Alaska Using A Process-Based Biogeochemistry Model, Sirui Wang, Qianlai Zhuang, Zicheng Yu, Scott Bridgham, Jason K. Keller

Education Faculty Articles and Research

This study uses an integrated modeling framework that couples the dynamics of hydrology, soil thermal regime, and ecosystem carbon and nitrogen to quantify the long-term peat carbon accumulation in Alaska during the Holocene. Modeled hydrology, soil thermal regime, carbon pools and fluxes, and methane emissions are evaluated using observation data at several peatland sites in Minnesota, Alaska, and Canada. The model is then applied for a 10,000 year (15 ka to 5 ka; 1 ka = 1000 cal years before present) simulation at four peatland sites. We find that model simulations match the observed carbon accumulation rates at fen sites …

Modeling PCo2 Variability In The Gulf Of Mexico, Zuo Xue, Ruoying He, Katja Fennel, Wei-Jun Cai, Steven Lohrenz, Wei-Jen Huang, Hanqin Tian, Wei Ren, Zhengchen Zang

Plant and Soil Sciences Faculty Publications

A three-dimensional coupled physical–biogeochemical model was used to simulate and examine temporal and spatial variability of sea surface pCO₂ in the Gulf of Mexico (GoM). The model was driven by realistic atmospheric forcing, open boundary conditions from a data-assimilative global ocean circulation model, and observed freshwater and terrestrial nutrient and carbon input from major rivers. A 7-year model hindcast (2004–2010) was performed and validated against ship measurements. Model results revealed clear seasonality in surface pCO₂ and were used to estimate carbon budgets in the Gulf. Based on the average of model simulations, the GoM was a …

Bulletin No. 42: The Mamacoke Conservation Area, Glenn Dreyer, Robert Askins, Scott Peterson

Bulletins

No abstract provided.

Identifying And Addressing Soil Property Issues Affecting Roadside Vegetation Establishment, Xu Li, Martha Mamo, Walter H. Schacht, Tala Awada, Humberto Blanco-Canqui

Nebraska Department of Transportation: Research Reports

Attaining adequate vegetation cover along highways is important for NDOR to comply with EPA’s stormwater regulations. However, low plant cover is a common problem on shoulders (first 16 feet off the pavement) of many highways in Nebraska. The ultimate goal of this study is to identify cost-effective engineering solutions that assure adequate seed beds (i.e., soil conditions) for establishment of selected seeding mixtures. The objectives of this study are to (1) characterize the soil properties along roadsides where vegetation stands have not developed well, and (2) verify the effects of select soil property parameters on plant germination and establishment.

Sampling …

Regulation Of Pyrroloquinoline Quinone-Dependent Glucose Dehydrogenase Activity In The Model Rhizosphere-Dwelling Bacterium Pseudomonas Putida Kt2440, Ran An, Luke Moe

Plant and Soil Sciences Faculty Publications

Soil-dwelling microbes solubilize mineral phosphates by secreting gluconic acid, which is produced from glucose by a periplasmic glucose dehydrogenase (GDH) that requires pyrroloquinoline quinone (PQQ) as a redox coenzyme. While GDH-dependent phosphate solubilization has been observed in numerous bacteria, little is known concerning the mechanism by which this process is regulated. Here we use the model rhizosphere-dwelling bacterium Pseudomonas putida KT2440 to explore GDH activity and PQQ synthesis, as well as gene expression of the GDH-encoding gene (gcd) and PQQ biosynthesis genes (pqq operon) while under different growth conditions. We also use reverse transcription-PCR to identify transcripts …

Understanding Variability In Crop Response To Fertilizer And Amendments In Sub-Saharan Africa, Job Kihara, Generose Nziguheba, Shamie Zingore, Adama Coulibaly, Anthony Esilaba, Vernon Kabambe, Samuel Njoroge, Cheryl Palm, Jeroen Huising

All Peer-Reviewed Publications

Improved understanding of soil fertility factors limiting crop productivity is important to develop appropriate soil and nutrient management recommendations in sub-Saharan Africa. Diagnostic trials were implemented in Kenya, Malawi, Mali, Nigeria and Tanzania, as part of the African Soils Information Service (AfSIS) project, to identify soil fertility constraints to crop production across various cropping systems and soil fertility conditions. In each country, one to three sites of 10 km × 10 km were included with each site having 12-31 field trials. The treatments tested included a control, an NPK treatment, three treatments in which the N, P and K nutrients …

Validation Of N-Star Nitrogen Rate Recommendations And Evaluation Of N-Star Soil Sampling Procedures For Clay Soils In Arkansas, Jarom Thane Davidson

Graduate Theses and Dissertations

The two methods for determining N-fertilizer recommendations for rice (Oryza sativa L.) in Arkansas are the standard N recommendation (SR) based on soil texture, previous crop, and rice cultivar, and the Nitrogen-Soil Test for Rice (N-STaR) which quantifies the potentially mineralizable-N of the soil and provides a site-specific N recommendation. The N-STaR program has recently been developed, and the validation of N-STaR for clay soils is an important step in ensuring that N-STaR predicts correct N-fertilizer rates for rice under a delayed-flood production system. Small-plot trials located across Arkansas compared the N-STaR 95 and 100% relative grain yield (RGY) N …

Determination Of Optimum Fall And Spring Nitrogen Fertilizer Rate For Maximizing Grain Yield Of Soft Red Winter Wheat Sown At Variable Planting Dates, Lucas Vasconcelos Vieira

Graduate Theses and Dissertations

An optimum planting date is important for winter wheat nitrogen (N) management as it dramatically changes the growing environment including temperature and moisture, ultimately affecting fertilizer efficiency and grain yield (GY). In Arkansas, high precipitation in the fall often forces farmers to delay planting and current Arkansas recommendations include the application of fall N when soft red winter wheat (SRWW) is sown later than optimum, despite the lack of data supporting this practice. This study evaluated the effect of rate and timing of N application on GY of SRWW sown at variable planting dates in Arkansas. Granular urea was split …

A R2r3-Myb Transcription Factor Regulates The Flavonol Biosynthetic Pathway In A Traditional Chinese Medicinal Plant, Epimedium Sagittatum, Wenjun Huang, A. B. M. Khaldun, Jianjun Chen, Chanjuan Zhang, Haiyan Lv, Ling Yuan, Ying Wang

Plant and Soil Sciences Faculty Publications

Flavonols as plant secondary metabolites with vital roles in plant development and defense against UV light, have been demonstrated to be the main bioactive components (BCs) in the genus Epimedium plants, several species of which are used as materials for Herba Epimedii, an important traditional Chinese medicine. The flavonol biosynthetic pathway genes had been already isolated from Epimedium sagittatum, but a R2R3-MYB transcription factor regulating the flavonol synthesis has not been functionally characterized so far in Epimedium plants. In this study, we isolated and characterized the R2R3-MYB transcription factor EsMYBF1 involved in regulation of the flavonol biosynthetic pathway …

Three-Dimensional Architecture And Hydrostratigraphy Of Cross-Cutting Buried Valleys Using Airborne Electromagnetics, Glaciated Central Lowlands, Nebraska, Usa, Jesse T. Korus Dr., Robert Matthew Joeckel, Dana P. Divine, Jared D. Abraham

Conservation and Survey Division: Faculty and Staff Publications

Buried valleys are characteristic features of glaciated landscapes, and their deposits host important aquifers worldwide. Understanding the stratigraphic architecture of these deposits is essential for protecting groundwater and interpreting sedimentary processes in subglacial and ice-marginal environments. The relationships between depositional architecture, topography and hydrostratigraphy in dissected, pre-Illinoian till sheets is poorly understood. Boreholes alone are inadequate to characterize the complex geology of buried valleys, but airborne electromagnetic surveys have proven useful for this purpose. A key question is whether the sedimentary architecture of buried valleys can be interpreted from airborne electromagnetic profiles. This study employs airborne electromagnetic resistivity profiles to …

Soil Extracellular Enzyme Activities, Soil Carbon And Nitrogen Storage Under Nitrogen Fertilization: A Meta-Analysis, Siyang Jian, Jianwei Li, Ji Chen, Gangsheng Wang, Melanie A. Mayes, Kudjo E. Dzantor, Dafeng Hui, Yiqi Luo

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) fertilization affects the rate of soil organic carbon (SOC) decomposition by regulating extracellular enzyme activities (EEA). Extracellular enzymes have not been represented in global biogeochemical models. Understanding the relationships among EEA and SOC, soil N (TN), and soil microbial biomass carbon (MBC) under N fertilization would enable modeling of the influence of EEA on SOC decomposition. Based on 65 published studies, we synthesized the activities of α-1,4-glucosidase (AG), β-1,4-glucosidase (BG), β-d-cellobiosidase (CBH), β-1,4-xylosidase (BX), β-1,4-N-acetyl-glucosaminidase (NAG), leucine amino peptidase (LAP), urease (UREA), acid phosphatase (AP), phenol oxidase (PHO), and peroxidase (PEO) in response to N fertilization. The proxy …

High-Input Management Systems Effect On Soybean Seed Yield, Yield Components, And Economic Break-Even Probabilities, John M. Orlowski, Bryson J. Haverkamp, Randall G. Laurenz, David A. Marburger, Eric W. Wilson, Shaun N. Casteel, Shawn P. Conley, Seth L. Naeve, Emerson D. Nafziger, Kraig L. Roozeboom, William J. Ross, Kurt D. Thelen, Chad Lee

Plant and Soil Sciences Faculty Publications

Elevated soybean [Glycine max (L.) Merr.] prices have spurred interest in maximizing soybean seed yield and has led growers to increase the number of inputs in their production systems. However, little information exists about the effects of high-input management on soybean yield and profitability. The purpose of this study was to investigate the effects of individual inputs, as well as combinations of inputs marketed to protect or increase soybean seed yield, yield components, and economic break-even probabilities. Studies were established in nine states and three soybean growing regions (North, Central, and South) between 2012 and 2014. In each site-year …

Costimulation Of Soil Glycosidase Activity And Soil Respiration By Nitrogen Addition, Ji Chen, Yiqi Luo, Jianwei Li, Xuhui Zhou, Junji Cao, Rui-Wu Wang, Yunqiang Wang, Shelby Shelton, Zhao Jin, Laura M. Walker, Zhaozhong Feng, Shuli Niu, Wenting Feng, Siyang Jian, Lingyan Zhou

Agricultural and Environmental Sciences Faculty Research

Unprecedented levels of nitrogen (N) have been deposited in ecosystems over the past century, which is expected to have cascading effects on microbially mediated soil respiration (SR). Extracellular enzymes play critical roles on the degradation of soil organic matter, and measurements of their activities are potentially useful indicators of SR. The links between soil extracellular enzymatic activities (EEAs) and SR under N addition, however, have not been established. We therefore conducted a meta-analysis from 62 publications to synthesize the responses of soil EEAs and SR to elevated N. Nitrogen addition significantly increased glycosidase activity (GA) by 13.0%, α-1,4-glucosidase (AG) by …

Performance Of Endophyte Infected Tall Fescue In Europe And North America, Kari Saikkonen, Timothy D. Phillips, Stanley H. Faeth, Rebecca L. Mcculley, Irma Saloniemi, Marjo Helander

Plant and Soil Sciences Faculty Publications

Human assisted plant invasions from Europe to North America have been more common than the reverse. We tested endophyte-mediated performance of tall fescue in parallel three year experiments in Europe and the USA using endophyte infected and uninfected wild and cultivated plants. Experimental plants were subjected to nutrient and water treatments. Whereas endophyte infection increased tall fescue performance in general, the effects of endophytes on plant growth and reproduction varied among plant origins under different environmental conditions. Naturally endophyte-free Finnish cultivar ‘Retu’ performed equally well as ‘Kentucky-31’ in both geographic locations. All Eurasian origin plants performed well in the US. …

The Terroir Of Pinot Noir Wine In The Willamette Valley, Oregon : A Broad Analysis Of Vineyard Soils, Grape Juice And Wine Chemistry, Kathryn Nora Barnard

Dissertations and Theses

Terroir is determined by a combination of factors in the vineyard including the grape varietal, geology and soil, soil hydrology, physiography, and climate. Although most studies have examined regional differences in wine flavors and associated provenance of wine based on chemistry, few have examined the chemistry of the soil and the ability to trace that chemistry to grape juice and, finally, to the wine. This dissertation examines what soil physical and chemical differences specific to this region might influence grape juice chemistry and wine chemistry.

Wine-grapes in the Willamette Valley, Oregon, are grown on three major soil parent materials: volcanic, …

Properties And Nutrient Status Of Degraded Soils In Luzon, Philippines, Michelle Ann M. Calubaquib, Ian A. Navarrete, Pearl B. Sanchez

Environmental Science Faculty Publications

A prerequisite to soil management, particularly in degraded soils, is a good knowledge of the characteristics and fertility status of degraded soil, which is fundamental to planning suitable soil management strategies for crop production purposes. The aim of this study was to determine the physico-chemical and mineralogical properties and fertility constraints of degraded soils in Luzon, Philippines. Ten surface soil samples were collected from 10 degraded soils representing the dominant soil series in Luzon Island. These soils were analyzed for physical, chemical and mineralogical properties. Results revealed that all soils have high clay content (except Bantay soil), which impedes cultivation. …

A Hydrochemical Assessment Of Groundwater Recharge And Flow In The Broome Sandstone Aquifer, La Grange Area, Western Australia, Glenn A. Harrington, Nikki M. Harrington

Natural resources commissioned reports

The Department of Agriculture and Food Western Australia has undertaken a four-year Royalties for Regions funded project in the La Grange Groundwater Area south of Broome. The purpose of the project was to provide improved knowledge and confidence about soil suitability and water availability for potential expansion of irrigated agriculture in the region. A range of complementary techniques have been used to assess the groundwater resources in the Broome Sandstone aquifer, including contemporary approaches such as drilling and aquifer pumping tests, and state-of-the-art approaches such as airborne geophysical surveys and hydrochemistry investigations.

This report presents a synthesis of all hydrochemistry …

The Cosmic-Ray Neutron Probe Method For Estimating Field Scale Soil Water Content: Advances And Applications, William A. Avery

School of Natural Resources: Dissertations, Theses, and Student Research

The need for accurate, real-time, reliable, and multi-scale soil water content (SWC) monitoring is critical for a multitude of scientific disciplines trying to understand and predict the earth’s terrestrial energy, water, and nutrient cycles. One promising technique to help meet this demand is fixed and roving cosmic-ray neutron probes (CRNP). However, the relationship between observed low-energy neutrons and SWC is affected by local soil and vegetation calibration parameters. This effect may be accounted for by a calibrated equation based on local soil type and the amount of standing biomass. However, determining the calibration parameters for this equation is labor and …

Cone In Cone Concretions Of The Stanley Group In Southeastern Oklahoma, Kyle B. Ayres

Electronic Theses and Dissertations

Cone in cone concretions found in the Stanley Group of Southeastern Oklahoma have a variety of external and internal attributes which allow diagenetic and theoretical models of formation to be hypothesized. Stanley Group carbonate cone in cone concretions are initially formed in sulfur reducing horizons at shallow burial depths in a poorly circulated possibly deep trough containing siliceous sediments and organic matter. Collected concretions near the town of Smithville, Oklahoma displayed four different external morphologies and four variations of mineral constituents. All concretions contained microscopic cones which initiated diffusion and/or fluid patterns and is an early cementation process that directly …

Barrier Spit Evolution And Primary Consolidation Of Backbarrier Facies: West Belle Pass Barrier, La, John N. Kramer Iii

LSU New Orleans Theses and Dissertations

West Belle Pass Barrier is a barrier spit that formed during the last delta lobe progradation associated with the Lafourche delta complex. Located on the western flank of the Caminada-Moreau Headland, West Belle Pass Barrier and Raccoon Pass are located downdrift of the Belle Pass jetties. Morphological changes stemming from storms, jetty infrastructure, and an expanding tidal inlet are evaluated using historical shoreline data and imagery. Littoral transport around the jetties combined with inlet growth created a framework wherein sediment is transported through Raccoon Pass and sequestered as a flood-tidal delta. These events aided in the landward migration of West …

Compost Land Management And Soil Carbon Sequestration, Kylene A. Hohman

Senior Honors Projects, 2010-2019

Extensive fossil fuel burning has released carbon dioxide into the atmosphere. Under proper ecological conditions plants convert atmospheric carbon dioxide into stable soil organic matter, a natural and efficient means of mitigating climate change. In the symbiotic relationship between mycorrhizae and plants, mycorrhizae provide plants with essential nutrients in exchange for carbon sugars leaked from the plants. Mycorrhizae convert carbon sugars to an exudate called glomalin, a protein that assists in developing soil aggregates composed of sand, silt, and clay. These aggregates, called humus, store carbon for hundreds of years under healthy ecological conditions. Compost prompts soil microbes to aerobically …

Cockatoo Sands In The Victoria Highway And Carlton Hill Areas, East Kimberley: Hydrogeology, Aquifer Properties And Groundwater Chemistry, D L. Bennett, John Andrew Simons, Richard J. George Dr, Paul Raper

Resource management technical reports

Cockatoo Sands are recognised as potentially suitable for irrigated agriculture because they are generally well drained and not subject to waterlogging or inundation. These characteristics allow them to be cultivated and prepared for planting various crops during the wet and dry seasons of northern Australia. Expanding agricultural production onto the Cockatoo Sands around Kununurra will increase opportunities for agriculture by increasing the overall scale of agriculture, allowing year-round agricultural enterprise, new crops and new market opportunities.

DAFWA has assessed the soil characteristics and agriculturally suitable areas of Cockatoo Sands in the Victoria Highway and Carlton Hill areas near Kununurra. Potential …

Gone With The Wind: Soil Moisture Effects On Gaseous Nitrogen Removal From Wastewater, Faith L. Anderson

Senior Honors Projects

Onsite wastewater treatment systems (OWTS), or septic systems, release nitrogen (N), which can be detrimental to aquatic ecosystems. The final step in the treatment of wastewater is dispersal onto a drainfield, where it percolates through the soil. Part of the N is removed from wastewater and released into the atmosphere as N₂ and N₂O by denitrification, which requires anoxic conditions. Previous studies looking at the effect of soil water-filled pore space (WFPS) on denitrification using clean water with a high level of dissolved O₂ (DO) have identified a minimum of 60% WFPS for denitrification to take …

Alluvial Sedimentation Associated With Logging In Low Gradient Watersheds In Desoto National Forest, Mississippi, Andrew W. Simmons

Master's Theses

Forestry and related businesses are an important factor of Mississippi’s economy, contributing between $11 and $14 billion annually (Mississippi Forestry Commission, 2006). The timber industry is not only important in Mississippi but is an important sector of the economy throughout the Gulf Coast region. While providing positive economic benefits to the region, the forestry industry can also negatively affect soil properties, hillslope stability, and increase sedimentation rates in local streams and rivers. The aim of this research is to determine if forestry removal causes an increase of soil erosion and how it affects floodplain sedimentation in the low gradient watershed …

Validation Of An Internal Camera Based Volume Determination System For Triaxial Testing, Leah D. Miramontes

Civil Engineering Undergraduate Honors Theses

Accurate strain and volume measurements are critical to phase relationships and strength determination for saturated and unsaturated soils. In recent years, laboratory-based photographic techniques of monitoring soil specimens have become more common. These techniques have been used to reconstruct 3D models and to determine strain and volumetric changes of triaxial specimens. A new technique that utilized digital photographs of the soil specimen, captured from within a triaxial testing cell, was utilized. Photographs were processed using photogrammetry software to reconstruct 3D models of the soil specimens. By placing camera equipment within the cell, the technique eliminated the need to account for …

Evaluation Of Rusle 2 To Estimate Soil Loss From Pastures, Stasha Katrina Balkissoon

Graduate Theses and Dissertations

The accurate estimation of soil erosion by the Revised Universal Soil Loss Equation version 2 (RUSLE2) is critical for several conservation assessments, least of which is its use in the Phosphorus Index (PI) to identify and rank the vulnerability of agricultural fields to phosphorus (P) runoff. Earlier versions of RUSLE reported a soil loss overestimation, which were revised to give RUSLE2, where biomass production in different climatic regions was more accurately represented. RUSLE version 2.0, which contains the new vegetative biomass production routine, was evaluated using two performance indices, the Nash Sutcliffe Efficiency Index (NSE) and Index of Agreement (D) …

11th New World Luminescence Dating Workshop Scientific Program And Abstracts And Field Trip Guide Book, P.R. Hanson, James B. Swinehart, Joseph Mason

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.