Biogeochemistry Commons^™

Novel Analytical Approaches For The Study Of Energy And Nutrient Flow In Streams, Michelle Catherine Kelly

Dissertations, Master's Theses and Master's Reports

This dissertation applied novel modeling, experimental and statistical approaches to overcome the challenges of measuring and analyzing energy and nutrient cycling in streams through 3 studies: (1) determining the predictors of respiration and denitrification in streams across the United States, (2) simultaneous estimation of denitrification and nitrogen (N) fixation rates, and (3) the impact of C lability metrics on the interpretation of C degradation in DOM incubation experiments. In the first study, I used predictive modeling approaches to show that respiration and denitrification were positively correlated across the landscape but were predicted by factors at different spatial scales. Denitrification rates …

Benthic Nitrogen Dynamics In Response To Deltaic Succession, Anthropogenic Fertilization And Hurricane Events In An Emerging Coastal Deltaic Floodplain Within The Mississippi River Delta Plain, Song Li

LSU Doctoral Dissertations

Increasing concentrations of nitrogenous fertilizer (NO₃^-) in rivers have potentially altered benthic nitrogen (N) cycling in coastal deltaic floodplains at the continental margins of major rivers. Here I evaluated the N removal capacity of a newly emergent coastal deltaic floodplain [Wax Lake Delta (WLD)] within the Mississippi River Delta Plain using continuous flow-through incubations. I investigated the response of benthic N dynamics in WLD to deltaic succession, anthropogenic fertilization and hurricane events. The estimated annual NO₃^- removal of 896 Mg N yr^-1 in WLD accounts for 10 to 27% of total NO₃^{- …}

Scenes From The Swale: Investigating Spatial And Temporal Dimensions Of Nitrogen Cycling In Urban Stormwater Bioretention Facilities, Erin Nicole Looper

Dissertations and Theses

Urban development is transforming landscapes at unprecedented rates. Human activities and landscape modifications associated with urbanization extensively increase hydrologic demands and modify natural hydrologic systems; consequently, population growth occurring in urban areas increases pressure on water resources. Urban aquatic ecosystems are vulnerable to impacts associated with increased connectivity with urban surfaces and hydrologic changes that initiate long-term changes in receiving waterbodies. Nitrogen (N) loading from urban and suburban catchments to receiving surface waters can lead to impairment of aquatic ecosystems and is a concern in many cities with water quality issues. To improve urban water quality, cities are increasingly adopting …

Evaluating Seasonal Nutrient Fluxes In Emerging And Eroding Wetlands Of The Louisiana Delta Plain, Kiran Upreti

LSU Doctoral Dissertations

Deltaic wetlands can ameliorate high NO₃^- loads via denitrification, a dominant NO₃^- reduction pathway in inland and coastal habitats. Dissimilatory Nitrate Reduction to Ammonia (DNRA), in contrast to denitrification, conserves N within the system and has been found to be favored over denitrification with increase in salinity and temperature. There are no studies in the Louisiana Deltaic plain with simultaneous estimation of denitrification and DNRA. Increased P availability has been shown to increase denitrification so it is essential to understand P biogeochemistry when studying N cycle. Here, we evaluated net denitrification using N₂:Ar and …

The Role Of Small Reservoirs In Reducing Reactive N Export Via Denitrification, Margaret Phillips, Wil Wollheim

Honors Theses and Capstones

Reactive nitrogen (N), which harms ecosystem health, has been increasing in the biosphere, leading to higher N export to coastal ecosystems. Although man-made reservoirs can be significant sources of greenhouse gases, they can also retain N, thus reducing N export. Because many dams are relics from industrial hydropower, their removal is becoming increasingly common. It is therefore crucial to understand the ecological tradeoffs of man-made reservoirs. While previous studies have examined nutrient budgets and denitrification at inputs and outputs of large reservoirs, small reservoir dynamics remain understudied. In this study, we measured inputs and outputs of NO₃ and N …

Multiple Metabolisms Constrain The Anaerobic Nitrite Budget In The Eastern Tropical South Pacific, Andrew R. Babbin, Brian D. Peters, Calvin W. Mordy, Brittany Widner, Karen L. Casciotti, Bess B. Ward

OES Faculty Publications

The Eastern Tropical South Pacific is one of the three major oxygen deficient zones (ODZs) in the global ocean and is responsible for approximately one third of marine water column nitrogen loss. It is the best studied of the ODZs and, like the others, features a broad nitrite maximum across the low oxygen layer. How the microbial processes that produce and consume nitrite in anoxic waters interact to sustain this feature is unknown. Here we used ¹⁵N-tracer experiments to disentangle five of the biologically mediated processes that control the nitrite pool, including a high-resolution profile of nitrogen loss rates. …

Examining Denitrification In Agricultural Ditch Sediments Vegetated With Rice Cutgrass (Leersia Oryzoides): Modeling Seasonal Variation Across Increasing Levels Of Nitrate Loading And Model Application To Pre-Existing Datasets, Shannon Lee Speir

Graduate Theses and Dissertations

Nitrogen (N) derived from fertilizer application in agricultural systems may contribute to significant environmental impacts, including eutrophication of fresh and coastal waters. Rice cutgrass (Leersia oryzoides) can significantly enhance denitrification potential in agricultural ditch sediments, but relationships with known drivers are not well understood. To address this, I examined effects of nitrate (NO3-) availability on dinitrogen gas (N2) and NO3- fluxes seasonally in Chapter 2. Denitrification rates were measured as N2 flux from intact vegetated sediment cores using Membrane Inlet Mass Spectrometry (MIMS). Michaelis-Menten models were developed from observations to mathematically describe N2 fluxes across the spring, summer, and fall …

Statistical Modeling To Predict N2O Production Within The Hyporheic Zone By Coupling Denitrifying Microbial Community Abundance To Geochemical And Hydrological Parameters, Tiffany Brooke Farrell

Boise State University Theses and Dissertations

The hyporheic zone (HZ) of streams can be a significant source of nitrous oxide (N₂O). However, the biogeochemical processes controlling N₂O emissions remain poorly constrained due to difficulties in obtaining high-resolution chemical, physical, and biological data from streams. We performed a large-scale flume experiment to unravel the complexities of a natural system by constraining streambed morphology, flow rate, organic carbon loading, grain size distribution, and exogenous nitrate loading while enabling regular monitoring of dissolved oxygen, pH, alkalinity, and concentrations of NO₃^-, NO₂^-, NH₄⁺, and N₂O …

Gone With The Wind: Soil Moisture Effects On Gaseous Nitrogen Removal From Wastewater, Faith L. Anderson

Senior Honors Projects

Onsite wastewater treatment systems (OWTS), or septic systems, release nitrogen (N), which can be detrimental to aquatic ecosystems. The final step in the treatment of wastewater is dispersal onto a drainfield, where it percolates through the soil. Part of the N is removed from wastewater and released into the atmosphere as N₂ and N₂O by denitrification, which requires anoxic conditions. Previous studies looking at the effect of soil water-filled pore space (WFPS) on denitrification using clean water with a high level of dissolved O₂ (DO) have identified a minimum of 60% WFPS for denitrification to take …

Stoichiometric Controls On Denitrification In High Nitrate Watersheds, Brian Grebliunas

Theses and Dissertations

Watershed biogeochemistry throughout Midwestern agroecosystems have been altered through hydrologic manipulation and over-application of nitrogenous fertilizers. As a result, nitrate (NO3-N) export from subsurface drainage has negative impacts on local and downstream ecosystem health. Wetland installation has proven to be a viable option for targeted management where a large proportion of NO3-N is removed through the bacterially mediated process denitrification. For denitrification to maintain high rates under prolonged NO3-N saturation, a stable supply of labile dissolved organic carbon (DOC) is required. The focus of this dissertation was to study how the stoichiometry of agricultural wetlands limits denitrification within a controlled …

Investigation Of The Flow And Fate Of Nitrate In Epikarst At The Savoy Experimental Watershed, Northwest Arkansas, Jozef Laincz

Graduate Theses and Dissertations

Many karst aquifers are at high risk of nitrate contamination due to a combination of vulnerable geology characterized by thin soils and conduit flow, and excess inputs of nutrients from animal feeding operations. One zone that is present in many karst regions and could play an important role in nitrate attenuation due to properties such as increased residence time and matrix-water contact is the upper, weathered portion of karst, the epikarst. However, the understanding of this role is lacking, and the objective of this dissertation was to elucidate it. The fate of nitrate in the epikarst was traced along a …

Denitrification In Soils: From Genes To Environmental Outcomes, Jianqiu Zheng

Dissertations, Master's Theses and Master's Reports - Open

Denitrification is an important process of global nitrogen cycle as it removes reactive nitrogen from the biosphere, and acts as the primary source of nitrous oxide (N₂O). This thesis seeks to gain better understanding of the biogeochemistry of denitrification by investigating the process from four different aspects: genetic basis, enzymatic kinetics, environmental interactions, and environmental consequences. Laboratory and field experiments were combined with modeling efforts to unravel the complexity of denitrification process under microbiological and environmental controls.

Dynamics of denitrification products observed in laboratory experiments revealed an important role of constitutive denitrification enzymes, whose presence were further confirmed …

Nitrogen Retention And Denitrification In Reservoirs, Erin Grantz

Graduate Theses and Dissertations

Studies coupling direct measurements of micro-scale nitrogen (N) cycle processes with ecosystem-scale flux estimates are needed to determine N retention hotspots within river networks, where up to 50% of terrestrial loading to aquatic systems is retained. This study examined the role of denitrification, a microbially-mediated reactive N removal pathway, in ecosystem-scale N retention in 3 small (< 1 km2), shallow flood-control reservoirs. Annual reservoir N retention was estimated through mass balance modeling of system inputs and outputs. Annual denitrification rates were estimated by combining multiple measurements of seasonal, habitat-specific dinitrogen gas (N2) fluxes. Annual reservoir N retention ranged from 14 - 19 g m-2 in the reservoirs, while reactive N removal through denitrification was 13 - 25 g m-2. Denitrification efficiency, or the portion of the retained N load that was denitrified, was high relative to other lentic systems and was > 100% at 2 sites. Previous lentic denitrification studies may have underestimated denitrification efficiency by not considering water column denitrification, which was 50% of total denitrification at one study reservoir. However, not all potential inputs, most importantly biological N2 fixation, were included in this …

Pelagic Functional Group Modeling: Progress, Challenges And Prospects, Raleigh R. Hood, Edward A. Laws, Robert A. Armstrong, Nicholas R. Bates, Christopher W. Brown, Craig A. Carlson, Fei Chai, Scott C. Doney, Paul G. Falkowski, Richard A. Feely, Marjorie A. M. Friedrichs

CCPO Publications

In this paper, we review the state of the art and major challenges in current efforts to incorporate biogeochemical functional groups into models that can be applied on basin-wide and global scales, with an emphasis on models that might ultimately be used to predict how biogeochemical cycles in the ocean will respond to global warming. We define the term "biogeochemical functional group" to refer to groups of organisms that mediate specific chemical reactions in the ocean. Thus, according to this definition, "functional groups" have no phylogenetic meaning-these are composed of many different species with common biogeochemical functions.

Substantial progress has …