Biogeochemistry Commons^™

Nitrogen Retention And Denitrification In Reservoirs, Erin Grantz

Graduate Theses and Dissertations

Studies coupling direct measurements of micro-scale nitrogen (N) cycle processes with ecosystem-scale flux estimates are needed to determine N retention hotspots within river networks, where up to 50% of terrestrial loading to aquatic systems is retained. This study examined the role of denitrification, a microbially-mediated reactive N removal pathway, in ecosystem-scale N retention in 3 small (< 1 km2), shallow flood-control reservoirs. Annual reservoir N retention was estimated through mass balance modeling of system inputs and outputs. Annual denitrification rates were estimated by combining multiple measurements of seasonal, habitat-specific dinitrogen gas (N2) fluxes. Annual reservoir N retention ranged from 14 - 19 g m-2 in the reservoirs, while reactive N removal through denitrification was 13 - 25 g m-2. Denitrification efficiency, or the portion of the retained N load that was denitrified, was high relative to other lentic systems and was > 100% at 2 sites. Previous lentic denitrification studies may have underestimated denitrification efficiency by not considering water column denitrification, which was 50% of total denitrification at one study reservoir. However, not all potential inputs, most importantly biological N2 fixation, were included in this …

Nutrient And Fecal Microbe Assessment Of The Water Quality Of Tates Creek, Madison County, Kentucky, Krisopher H. Carroll, Walter S. Borowski

EKU Faculty and Staff Scholarship

Tates Creek is a significant tributary to the Kentucky River that has shown high levels of microbial and nutrient pollution. We sampled the waters of Tates Creek comprehensively by occupying 25 stations along its 13-mile length, collecting stream water at the confluence of major tributaries from its headwaters to the Kentucky River. Samples were collected four times between May and August 2011 during dry periods as well as immediately after rainfall events.

We measured ammonium (NH₄⁺), nitrate (NO₃^-) and phosphate (PO₄^-) concentrations using colorimetry. Microbial samples were measured for total coliform …

Quantification Of Nitrate Sources And Sinks Using A Water Quality Network In Morro Bay Estuary, California, Johanna Nadia Jean Weston

Master's Theses

Using an instrumented water quality network in Morro Bay Estuary, California from 2007 to 2010 (15 min sampling frequency), this study addressed the two objectives of constructing a nitrate budget and assessing the influence of sampling frequency on water quality parameters. These two objectives led to the submission of an original report of research (Appendix A) and a note (Appendix B) to peer-reviewed journals.

The first objective was to characterize the high spatial and temporal variation in physical parameters and nitrate concentrations and to construct a nitrate budget quantifying sources and sinks of nitrate from the ocean, streams, and groundwater, …

Effect Of Reworking And Bioturbation On Sedimentary Reactive Iron Within A Microtidal Estuary, Amy Kathleen Pitts

OES Theses and Dissertations

Mixed redox conditions in sediments due to physical reworking may allow for enhanced remineralization of refractory organic matter due to Fe(III) redox cycling. In part this may occur because easily reducible iron oxides can be used by heterotrophic bacteria to remineralize the organic carbon. This phenomena has been observed in bioturbated sediments and in areas where physical factors (such as strong bottom currents) constantly rework the sediments. To specifically determine the effects of physical reworking and bioturbation on concentrations of easily reducible iron oxides, reactive iron concentrations were measured in surface sediments taken from two contrasting sites in the York …

Stromatolitic Knobs In Storrs Lake, San Salvador, Bahamas: Insights Into Organomineralization, Alexandre J. Fowler

Master's Theses

Storrs Lake, a hypersaline lake on the east coast of San Salvador Island, Bahamas, contains well-developed microbial mats, some of which have developed calcified structures called microbialites. Many of these microbialites are laminated, and therefore classified as stromatolites. This study focuses on small stromatolitic knobs located in the southern portion of Storrs lake, which are still actively forming, to gain insights into the early stages of stromatolite formation. These knobs appear to be forming as the result of in situ micritic precipitation mediated by both photosynthetic and heterotrophic microbial metabolisms. By comparing these small stromatolitic knobs to larger stromatolitic heads …

Biological Effects On Serpentinite Weathering, Mary H. Evert, Julie Baumeister, Elisabeth Hausrath

Undergraduate Research Opportunities Program (UROP)

Serpentinites, perhaps more than any other rock type, control the composition and evolution of the development of the surrounding ecosystems. The bulk chemistry of serpentinite rocks, high in Mg and trace elements, and low in nutrients such as Ca, K, P, and N, causes an extreme and stressful environment for ecosystems. However, the role that those serpentine ecosystems play in development of serpentine soils has not been examined.

Due to the unusual chemistry of serpentine soils, serpentine ecosystems have deeper and better-developed root systems than other ecosystems. The rhizosphere of serpentine systems, documented to produce abundant organic acids and siderophores, …

Relationships Between Snow Pack, Soil Moisture, And Forest Greenness: Implications For Smap, Jordan Anderson, Noah Molotch, Bin Guan

STAR Program Research Presentations

Snowpack in the arid/semi-arid western United States is a critical element of the hydrologic cycle as water is stored in the winter and released in the spring and summer. The warmer seasons rely heavily on this water source for various purposes including economic (farming), environmental and recreational demands. Moderate Imaging Spectroradiometer (MODIS) sensors were used in this project to measure seasonal variability in global vegetation phenology and productivity. MODIS data was used to calculate Normalized Difference Vegetation Index (NDVI) to estimate net primary production of subalpine forests in the Sierra Nevada mountain range. Preliminary results indicate that variability in forest …

No-Net-Loss Not Met For Nutrient Function In Freshwater Marshes: Recommendations For Wetland Mitigation Policies, Katie Hossler, Virginie Bouchard, M. Siobhan Fennessy, Serita D. Frey, Evelyn Anemaet, Ellen Herbert

Faculty Publications

Wetlands provide many important services throughout the world, with an estimated economic value that, in comparison to other ecosystems, far exceeds their relatively small global extent. In recognition of their importance, both national and international regulations exist to protect the world's remaining wetlands. Of growing interest is the “no-net-loss” policy which permits unavoidable destruction of wetlands if compensated by restoration of degraded wetlands or creation of new wetlands. The fundamental assumption of no-net-loss is that wetlands can be created which function equivalently to natural wetlands. One integral function that wetlands perform is cycling of carbon, nitrogen and phosphorus. Here we …

Evaluation Of The Carbon Budgets In The Forested And Agricultural Soils Of The Semi-Arid Mogollon-Datil Highlands And Rio Grande Basin, Ryan Reeves^, Lixin Jin*

COURI Symposium Abstracts, Summer 2011

No abstract provided.

Model-Based Analyses Of Nitrogen On The Mid-Atlantic Bight Continental Shelf, Tian Tian

OES Theses and Dissertations

The biogeochemistry of continental shelf systems is an important, but poorly quantified, component of the global cycling of nitrogen and carbon. In this study, simulations obtained from a one-dimensional (ID) biogeochemical model developed for the Middle Atlantic Bight (MAB) portion of the U.S. eastern continental shelf were analyzed to investigate nitrogen cycling processes. The 1D model included lower trophic level interactions and was forced by advective fields obtained from a corresponding three-dimensional biogeochemical model. Taylor and target diagram analyses, which compared in situ measurements of sea surface temperature (SST) and salinity, and chlorophyll and particulate organic carbon (POC) derived from …

Spatial Patterns Of Drought Triggers And Indicators, Joseph P. Robine

Department of Environmental Studies: Undergraduate Student Theses

Drought is a reoccurring phenomenon with widespread economic, social, and environmental impacts. Unlike other disasters, a drought cannot be easily detected. In addition, droughts are widespread and develop slowly over time making it difficult to detect its onset and monitor its severity and impacts. To assist in monitoring the severity and spatial extent of droughts, drought managers frequently use indicators and triggers. Drought indicators are meteorological or hydrological variables or indices that quantify or describe the level of drought severity. A drought trigger is a value of an indicator that initiates management and response actions. Despite the clear importance of …

Geochemical Controls On Mercury Methylation In Backwaters Of A Gulf Coastal Plain River System, Implications For Water Column Processes, Liam N. Schenk

Graduate Theses and Dissertations

The abundance and distribution of mercury and methyl mercury were investigated at three sites in the lower Ouachita River in the summer of 2010 in an effort to provide the first characterization of the extent of mercury contamination in this river system, and to investigate the potential for mercury methylation in the water column of backwaters off of the main channel. Results showed that filtered methyl mercury was positively correlated to dissolved organic carbon (r2=0.76) for water samples taken from the bottom 1 ft of the water column at three sites, suggesting the importance of dissolved organic carbon in mercury …

Using Equal‐Area Quadratic Splines To Compute Depth‐ Weighted Averages Of Soil Chemical Parameters, Chris E. Johnson, Jeremy Tamargo

Civil and Environmental Engineering - All Scholarship

No abstract provided.

Determination Of Caffeine As A Marker For Septic Tank Contamination Of Wilgreen Lake, Rosemary Onjiko, Susan Godbey, Walter S. Borowski, Darrin Smith, Lori Wilson

EKU Faculty and Staff Scholarship

Wilgreen Lake in Richmond, Kentucky, has been listed by both the state and the Environmental Protection Agency as an “impaired” lake due to excess nutrients, which may be in part contributed by domestic septic systems. Caffeine can be used as an anthropogenic marker to estimate the contribution of septic tank effluent to the lake. We have modified existing analytical methods to produce a viable method for the determination of caffeine in environmental water samples and applied the method to water samples collected from Wilgreen Lake. The modified method allows determination of caffeine in a concentration range of 75 to 10,000 …

Early Season Depletion Of Dissolved Iron In The Ross Sea Polynya: Implications For Iron Dynamics On The Antarctic Continental Shelf, Peter N. Sedwick, C. M. Marsay, B. M. Sohst, A. M. Aguilar-Islas, M. C. Lohan, M. C. Long, K. R. Arrigo, R. B. Dunbar, M. A. Saito, W. O. Smith, G. R. Ditullio

OES Faculty Publications

The Ross Sea polynya is among the most productive regions in the Southern Ocean and may constitute a significant oceanic CO₂sink. Based on results from several field studies, this region has been considered seasonally iron limited, whereby a "winter reserve" of dissolved iron (dFe) is progressively depleted during the growing season to low concentrations (~ 0.1 nM) that limit phytoplankton growth in the austral summer (December-February). Here we report new iron data for the Ross Sea polynya during austral summer 2005-2006 (27 December-22 January) and the following austral spring 2006 (16 November-3 December). The summer 2005-2006 data show …

Engineering Our Climate: A Critical Review Of The Geoengineering Response To Climate Change, Gary Huff

The Journal of Undergraduate Research

Various responses to greenhouse gas induced climate change have been proposed within the literature. While the most desirable response is to dramatically reduce greenhouse gas emissions, technological and financial obstacles make it difficult to realize the reductions necessary to solve the climate change problem. Several geoengineering schemes have been proposed that would compensate for increased greenhouse gas concentrations by reducing the solar energy absorbed by Earth. The most notable of these shortwave climate engineering schemes involves injection of sulfur aerosols into the stratosphere in order to disperse incoming radiation. This paper examines the geoengineering responses to climate change and demonstrates …

Climate-Mediated Nitrogen And Carbon Dynamics In A Tropical Watershed, Ashley P. Ballantyne, P. A. Baker, S. C. Fritz, B. Poulter

Ecosystem and Conservation Sciences Faculty Publications

Climate variability affects the capacity of the biosphere to assimilate and store important elements, such as nitrogen and carbon. Here we present biogeochemical evidence from the sediments of tropical Lake Titicaca indicating that large hydrologic changes in response to global glacial cycles during the Quaternary were accompanied by major shifts in ecosystem state. During prolonged glacial intervals, lake level was high and the lake was in a stable nitrogen-limited state. In contrast, during warm dry interglacials lake level fell and rates of nitrogen concentrations increased by a factor of 4–12, resulting in a fivefold to 24-fold increase in organic carbon …

Fossil And Contemporary Aerosol Particulate Organic Carbon In The Eastern United States: Implications For Deposition And Inputs To Watersheds, Andrew S. Wozniak, James E. Bauer, Rebecca M. Dickhut

Chemistry & Biochemistry Faculty Publications

Atmospheric particulate matter samples were collected from mid-Atlantic and northeastern U. S. (Virginia and New York, respectively) sites to assess the fossil versus contemporary sources contributing to aerosol organic carbon (OC) and the implications for its deposition to watersheds. Mean particulate matter total OC (TOC) deposition rates (wet + dry deposition) were calculated to be 1.6 and 2.4 mg C m^-2 d^-1 for the Virginia and New York sites, respectively. Wet deposition of particulate TOC was determined to be the dominant depositional mode, accounting for >65% (Virginia) and >80% (New York) of total aerosol TOC deposition. Isotopic mass …

Spatial And Interannual Variability Of Dissolved Organic Matter In The Kolyma River, East Siberia, Observed Using Satellite Imagery, Claire G. Griffin, Karen E. Frey, John Rogan, Robert M. Holmes

Geography

The Kolyma River basin in northeastern Siberia, the sixth largest river basin draining to the Arctic Ocean, contains vast reserves of carbon in Pleistocene-aged permafrost soils. Permafrost degradation, as a result of climate change, may cause shifts in riverine biogeochemistry as this old source of organic matter is exposed. Satellite remote sensing offers an opportunity to complement and extrapolate field sampling of dissolved organic matter in this expansive and remote region. We develop empirically based algorithms that estimate chromophoric dissolved organic matter (CDOM) and dissolved organic carbon (DOC) in the Kolyma River and its major tributaries in the vicinity of …

Investigating The Influence Of Organic Acids On Uraninite Solubility And Uranyl Sorption Onto Kaolinite, Michelle L. Barger

Dissertations

Within anoxic near surface aqueous settings where U0_2(S) may be released an opportunity to encounter and complex with organic acids may occur. Reactions between U0_2(S) and ligands may promote the solubility and mobility of uranium. Organic ligands investigated in the dissolution work include citric acid, NTA and EDTA. Exposure to the ligands had little effect on U0_2(S) solubility. The log activity of U0_2(S) hydrolysis under reduced conditions was -6.56. Under all measured conditions of ligand concentration, the data consistently show an increase in uranium concentration to a median log U activity of -4.89. The observed solubility …

Iron Oxide And Calcite Associated With Leptothrix Sp. Biofilms Within An Estavelle In The Upper Floridan Aquifer, Lee J. Florea, Chasity L. Stinson, Josh Brewer, Rick Fowler, B Joe Kearns, Anthony M. Greco

International Journal of Speleology

In Thornton’s Cave, an estavelle in west-central Florida, SEM, EDS, and XRD data reveal biofilms that are predominantly comprised of FeOOH-encrusted hollow sheaths that are overgrown and intercalated with calcite. Fragments of this crystalline biofilm adhere to the walls and ceiling as water levels vary within the cave. Those on the wall have a ‘cornflake’ appearance and those affixed to the ceiling hang as fibrous membranes. PCR of DNA in the active biofilm, combined with morphologic data from the tubes in SEM micrographs, point to Leptothrix sp., a common Fe-oxidizing bacteria, as the primary organism in the biofilm. Recent discoveries …

Biodegradation Of Bisphenol-A And 17b-Estradiol In Soil Mesocosms Under Alternating Aerobic/Anoxic/Anaerobic Conditions, Won-Seok Kim

USF Tampa Graduate Theses and Dissertations

Soil-aquifer treatment (SAT) has been proposed as a method for reusing treated municipal wastewater. SAT is characterized by alternating cycles of aerobic and anaerobic conditions in the subsurface, in response to alternating cycles of flooding and drainage of a surface impoundment. It is not yet known how these alternating redox conditions affect the removal of potentially harmful endocrine-disrupting compounds (EDCs) from treated effluent.

The overall objective of my doctoral research is to determine the fate of EDCs in alternating aerobic/anoxic/anaerobic conditions under simulated SAT conditions. To assess the fate of EDCs in simulated SAT conditions, I first had to develop …

Seasonal Changes In The Sinking Particulate Flux And In The Nitrogen Cycle Within The Euphotic And Twilight Zones Of The Cariaco Basin, Venezuela, Enrique Montes-Herrera

USF Tampa Graduate Theses and Dissertations

This study explored the effects of seasonal variability on the geochemistry of sinking pthesiss and on the nitrogen cycle of the Cariaco Basin. Pthesis fluxes were measured at the base of the euphotic zone (the depth of 1% of photosynthetically active radiation - PAR) with drifting sediment traps during months of upwelling and non-upwelling regimes from March 2007 to November 2009. Flux estimates were analyzed in the context of seasonal variations in sea surface temperature, primary productivity, and chlorophyll a concentrations using data generated by the CARIACO Time-series Program as well as satellite data. Additionally, nine years (1996-2000 and 2004-2007) …