Databases and Information Systems Commons^™

Tableau Algorithm For Concept Satisfiability In Description Logic Alch, Satya S. Sahoo, Krishnaprasad Thirunarayan

Kno.e.sis Publications

The provenir ontology is an upper-level ontology to facilitate interoperability of provenance information in scientific applications. The description logic (DL) expressivity of provenir ontology is ALCH, that is, it models role hierarchies (H) (without transitive roles and inverse roles). Even though the complexity results for concept satisfiability for numerous variants of DL such as ALC with transitively closed roles (ALC_R+ also called S), inverse roles SI, and role hierarchy SHI have been well-established, similar results for ALCH has been surprisingly missing from the literature. Here, we show that the complexity of the concept satisfiability problem for the ALCH variant …

Ontology Supported Knowledge Discovery In The Field Of Human Performance And Cognition, Christopher Thomas, Pablo N. Mendes, Delroy H. Cameron, Amit P. Sheth, Krishnaprasad Thirunarayan, Cartic Ramakrishnan

Kno.e.sis Publications

No abstract provided.

Analysis And Monetization Of Social Data, Amit P. Sheth

Kno.e.sis Publications

No abstract provided.

Extending Sparql To Support Spatially And Temporally Related Information, Prateek Jain, Amit P. Sheth, Peter Z. Yeh, Kunal Verma

Kno.e.sis Publications

No abstract provided.

Trykipedia: Collaborative Bio-Ontology Development Using Wiki Environment, Pramod Anantharam, Satya S. Sahoo, Brent Weatherly, Flora Logan, Raghava Mutharaju, Amit P. Sheth, Rick L. Tarleton

Kno.e.sis Publications

Biomedical ontology development is an intensely collaborative process between biology experts and computer scientists. With the proliferation of ontology based approach to solve informatics problems in biological domain, there is a need for collaborative environment that is intuitive and widely accepted for modeling the ontology.

An Ontological Representation Of Time Series Observations On The Semantic Sensor Web, Cory Andrew Henson, Holger Neuhaus, Amit P. Sheth, Krishnaprasad Thirunarayan, Rajkumar Buyya

Kno.e.sis Publications

Time series observations are a common method of collecting sensor data. The Open Geospatial Consortium (OGC) Sensor Web Enablement (SWE) provides a standard representation for time series observations within the Observations and Measurements language, and therefore is in heavy use on the Sensor Web. By providing a common model, Observations and Measurements (O&M) facilitates syntax-level integration, but lacks the ability to facilitate semantic-level integration. This inability can cause problems with interoperability between disparate sensor networks that may have subtle variations in their sensing methods. An ontological representation of time series observations could provide a more expressive model and resolve problems …

Situation Awareness Via Abductive Reasoning For Semantic Sensor Data: A Preliminary Report, Krishnaprasad Thirunarayan, Cory Andrew Henson, Amit P. Sheth

Kno.e.sis Publications

Semantic sensor Web enhances raw sensor data with spatial, temporal, and thematic annotations to enable high-level reasoning. In this paper, we explore how abductive reasoning framework can benefit formalization and interpretation of sensor data to garner situation awareness. Specifically, we show how abductive logic programming techniques, in conjunction with symbolic knowledge rules, can be used to detect inconsistent sensor data and to generate human accessible description of the state of the world from consistent subset of the sensor data. We also show how trust/belief information can be incorporated into the interpreter to enhance reliability. For concreteness, we formalize weather domain …

Semsos: Semantic Sensor Observation Service, Cory Andrew Henson, Josh Pschorr, Amit P. Sheth, Krishnaprasad Thirunarayan

Kno.e.sis Publications

Sensor observation service (SOS) is a Web service specification defined by the Open Geospatial Consortium (OGC) Sensor Web Enablement (SWE) group in order to standardize the way sensors and sensor data are discovered and accessed on the Web. This standard goes a long way in providing interoperability between repositories of heterogeneous sensor data and applications that use this data. Many of these applications, however, are ill equipped at handling raw sensor data as provided by SOS and require actionable knowledge of the environment in order to be practically useful. There are two approaches to deal with this obstacle, make the …

Semantic Integration Of Citizen Sensor Data And Multilevel Sensing: A Comprehensive Path Towards Event Monitoring And Situational Awareness, Amit P. Sheth

Kno.e.sis Publications

No abstract provided.

Computing For Human Experience: Sensors, Perception, Semantics, Web N.0, And Beyond, Amit P. Sheth

Kno.e.sis Publications

Traditionally there has been a strong separation between computing and human activities in the real world. The approach has largely been that of mapping the complexity and richness of the real world to constrained computer models and languages for more efficient computation, and then transferring the results for use in the real world. I think the time is ripe to reverse the situation, for computing and communication to transparently enrich and enhance human experience. Today, devices enable something more than a 'human instructs machine' paradigm. We are seeing computing and communication engage transparently in human activities by enriching them in …

Why Gujarat Needs Much Better Higher Education & Research To Succeed In Knowledge Economy & What We Can Do About It?, Amit P. Sheth, Kamlesh Lulla, Sanjay Chaudhary

Kno.e.sis Publications

This white paper distills the deliberations on the role of higher education and research as a key enabler of a Knowledge based Society. In particular it discusses (a) the importance of higher quality PhDs for building a knowledge society, (b) the initiatives and progress in competing economies in higher education and research, (c) where Gujarat stands in comparison, and (d) some recommendations on what Gujarat can do to enable timely progress towards building a knowledge based society and economy. These deliberations were conducted in conjunction with the International Conference on 'Reconnecting Gujarati Diaspora with its Homeland: Contribution to its Development …

Ontologies And Rules, Pascal Hitzler, Bijan Parsia

Computer Science and Engineering Faculty Publications

Ontologies and rules are two established paradigms in knowledge modelling, and play an important role for the Semantic Web. In this chapter, we present an introduction to common approaches for combining OWL ontologies and rules. In particular, we cover the Semantic Web Rules Language SWRL and Description Logic Programs DLP, and give pointers to the literature.

User-Generated Content On Social Media Challenges, Opportunities, Meenakshi Nagarajan

Kno.e.sis Publications

Understanding and exploiting user generated (textual) content (UGC) on social media is at the forefront of information management challenges today. The variety of UGC in detailed blog commentaries, collaborative wiki-content, online conversations, short messages in micro-blogs etc., are powering several personalization, monetization, crowd/business intelligence applications, and also providing an electronic microscope on social phenomena at an extraordinary scale. Certain characteristics of UGC however, necessitate key computational linguistic interventions before systems can tap into this data. A large portion of language found on social media is in the Informal English domain a blend of abbreviations, slang and context dependent terms delivered …

Citizen Sensing, Social Signals, And Enriching Human Experience, Amit P. Sheth

Kno.e.sis Publications

In this article, I introduce the exciting paradigm of citizen sensing enabled by mobile sensors and human computing - that is, humans as citizens on the ubiquitous Web, acting as sensors and sharing their observations and views using mobile devices and Web 2.0 services.

Semantics-Empowered Social Computing, Amit P. Sheth, Meenakshi Nagarajan

Kno.e.sis Publications

In this article, we discuss some of the challenges in marking-up or annotating UGC, a first step toward the realization of the social semantic Web. Using examples from real- world UGC, we show how domain knowledge can effectively complement statistical natural language processing techniques for metadata creation.

Prom: A Semantic Web Framework For Provenance Management In Science, Satya S. Sahoo, Roger Barga, Amit P. Sheth, Krishnaprasad Thirunarayan, Pascal Hitzler

Kno.e.sis Publications

The eScience paradigm is enabling researchers to collaborate over the Web in virtual laboratories and conduct experiments on an industrial scale. But, the inherent variability in the quality and trust associated with eScience resources necessitates the use of provenance information describing the origin of an entity. Existing systems often model provenance using ambiguous terminology, have poor domain semantics and include modeling inconsistencies that hinders interoperability. Further, mere collection of provenance information is of little value without a well-defined and scalable query mechanism.

In this paper, we present 'PrOM', a framework that addresses both the modeling and querying issues in eScience …

Characterization Of 1h Nmr Spectroscopic Data And The Generation Of Synthetic Validation Sets, Paul E. Anderson, Michael L. Raymer, Benjamin J. Kelly, Nicholas V. Reo, Nicholas J. Delraso, Travis E. Doom

Kno.e.sis Publications

Motivation: Common contemporary practice within the nuclear magnetic resonance (NMR) metabolomics community is to evaluate and validate novel algorithms on empirical data or simplified simulated data. Empirical data captures the complex characteristics of experimental data, but the optimal or most correct analysis is unknown a priori; therefore, researchers are forced to rely on indirect performance metrics, which are of limited value. In order to achieve fair and complete analysis of competing techniques more exacting metrics are required. Thus, metabolomics researchers often evaluate their algorithms on simplified simulated data with a known answer. Unfortunately, the conclusions obtained on simulated data are …

Service Level Agreement In Cloud Computing, Pankesh Patel, Ajith H. Ranabahu, Amit P. Sheth

Kno.e.sis Publications

Cloud computing that provides cheap and pay-as-you-go computing resources is rapidly gaining momentum as an alternative to traditional IT Infrastructure. As more and more consumers delegate their tasks to cloud providers, Service Level Agreements(SLA) between consumers and providers emerge as a key aspect. Due to the dynamic nature of the cloud, continuous monitoring on Quality of Service (QoS) attributes is necessary to enforce SLAs. Also numerous other factors such as trust (on the cloud provider) come into consideration, particularly for enterprise customers that may outsource its critical data. This complex nature of the cloud landscape warrants a sophisticated means of …

Determining The Best K For Clustering Transactional Datasets: A Coverage Density-Based Approach, Hua Yan, Keke Chen, Ling Liu

Kno.e.sis Publications

The problem of determining the optimal number of clusters is important but mysterious in cluster analysis. In this paper, we propose a novel method to find a set of candidate optimal number Ks of clusters in transactional datasets. Concretely, we propose Transactional-cluster-modes Dissimilarity based on the concept of coverage density as an intuitive transactional inter-cluster dissimilarity measure. Based on the above measure, an agglomerative hierachical clustering algorithm is developed and the Merge Dissimilarity Indexes, which are generated in hierachical cluster merging processes, are used to find the candidate optimal number Ks of clusters of transactional data. Our experimental results on …

The 4 X 4 Semantic Model: Exploiting Data, Functional, Non-Functional And Execution Semantics Across Business Process, Workflow, Partner Services And Middleware Services Tiers, Amit P. Sheth, Karthik Gomadam

Kno.e.sis Publications

Business processes in the global environment increasingly encompass multiple partners and complex, rapidly changing requirements. In this context it is critical that strategic business objectives align with and map accurately to systems that support flexible and dynamic business processes. To support the demanding requirements of global business processes, we propose a comprehensive, unifying 4 X 4 Semantic Model that uses Semantic Templates to link four tiers of implementation with four types of semantics. The four tiers are the Business Process Tier, the Workflow Enactment Tier, the Partner Services Tier, and the Middleware Services Tier. The four types of semantics are …

Semantic Sensor Web, Amit P. Sheth, Cory Henson, Krishnaprasad Thirunarayan

Kno.e.sis Publications

No abstract provided.

Capturing Workflow Event Data For Monitoring, Performance Analysis, And Management Of Scientific Workflows, Matthew Valerio, Satya S. Sahoo, Roger Barga, Jared Jackson

Kno.e.sis Publications

To effectively support real-time monitoring and performance analysis of scientific workflow execution, varying levels of event data must be captured and made available to interested parties. This paper discusses the creation of an ontology-aware workflow monitoring system for use in the Trident system which utilizes a distributed publish/subscribe event model. The implementation of the publish/subscribe system is discussed and performance results are presented.

Growing Fields Of Interest: Using An Expand And Reduce Strategy For Domain Model Extraction, Christopher Thomas, Pankaj Mehra, Roger Brooks, Amit P. Sheth

Kno.e.sis Publications

Domain hierarchies are widely used as models underlying information retrieval tasks. Formal ontologies and taxonomies enrich such hierarchies further with properties and relationships associated with concepts and categories but require manual effort; therefore they are costly to maintain, and often stale. Folksonomies and vocabularies lack rich category structure and are almost entirely devoid of properties and relationships. Classification and extraction require the coverage of vocabularies and the alterability of folksonomies and can largely benefit from category relationships and other properties. With Doozer, a program for building conceptual models of information domains, we want to bridge the gap between the vocabularies …

Relationship Web: Trailblazing, Analytics And Computing For Human Experience, Amit P. Sheth

Kno.e.sis Publications

This panel presentation was give at the 27th International Conference on Conceptual Modeling (ER 2008), Barcelona, Spain, October 20-23, 2008.

An Ontology-Driven Semantic Mash-Up Of Gene And Biological Pathway Information: Application To The Domain Of Nicotine Dependence, Satya S. Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth

Kno.e.sis Publications

Objectives: This paper illustrates how Semantic Web technologies (especially RDF, OWL, and SPARQL) can support information integration and make it easy to create semantic mashups (semantically integrated resources). In the context of understanding the genetic basis of nicotine dependence, we integrate gene and pathway information and show how three complex biological queries can be answered by the integrated knowledge base.

Methods: We use an ontology-driven approach to integrate two gene resources (Entrez Gene and HomoloGene) and three pathway resources (KEGG, Reactome and BioCyc), for five organisms, including humans. We created the Entrez Knowledge Model (EKoM), an information model in OWL …

Adapting Ranking Functions To User Preference, Keke Chen, Ya Zhang, Zhaohui Zheng, Hongyuan Zha, Gordon Sun

Kno.e.sis Publications

Learning to rank has become a popular method for web search ranking. Traditionally, expert-judged examples are the major training resource for machine learned web ranking, which is expensive to get for training a satisfactory ranking function. The demands for generating specific web search ranking functions tailored for different domains, such as ranking functions for different regions, have aggravated this problem. Recently, a few methods have been proposed to extract training examples from user clickthrough log. Due to the low cost of getting user preference data, it is attractive to combine these examples in training ranking functions. However, because of the …

Description Logic Reasoning With Decision Diagrams: Compiling Shiq To Disjunctive Datalog, Sebastian Rudolph

Kno.e.sis Publications

We propose a novel method for reasoning in the description logic SHIQ. After a satisfiability preserving transformation from SHIQ to the description logic ALCIb, the obtained ALCIb Tbox T is converted into an ordered binary decision diagram (OBDD) which represents a canonical model for T. This OBDD is turned into a disjunctive datalog program that can be used for Abox reasoning. The algorithm is worst-case optimal w.r.t. data complexity, and admits easy extensions with DL-safe rules and ground conjunctive queries.

Segmenting Brain Tumors Using Pseudo-Conditional Random Fields, Chi-Hoon Lee, Shaojun Wang, Albert Murtha, Matthew R.G. Brown, Russell Greiner

Kno.e.sis Publications

Locating Brain tumor segmentation within MR (magnetic resonance) images is integral to the treatment of brain cancer. This segmentation task requires classifying each voxel as either tumor or non-tumor, based on a description of that voxel. Unfortunately, standard classifiers, such as Logistic Regression (LR) and Support Vector Machines (SVM), typically have limited accuracy as they treat voxels as independent and identically distributed (iid). Approaches based on random fields, which are able to incorporate spatial constraints, have recently been applied to brain tumor segmentation with notable performance improvement over iid classifiers. However, previous random field systems involved computationally intractable …

A Faceted Classification Based Approach To Search And Rank Web Apis, Karthik Gomadam, Ajith Harshana Ranabahu, Meenakshi Nagarajan, Amit P. Sheth, Kunal Verma

Kno.e.sis Publications

Web application hybrids, popularly known as mashups, are created by integrating services on the Web using their APIs. Support for finding an API is currently provided by generic search engines or domain specific solutions such as Google and ProgrammableWeb. Shortcomings of both these solutions in terms of and reliance on user tags make the task of identifying an API challenging. Since these APIs are described in HTML documents, it is essential to look beyond the boundaries of current approaches to Web service discovery that rely on formal descriptions. In this work, we present a faceted approach to searching and ranking …

Semantics Enhanced Services: Meteor-S, Sawsdl And Sa-Rest, Amit P. Sheth, Karthik Gomadam, Ajith Harshana Ranabahu

Kno.e.sis Publications

Services Research Lab at the Knoesis center and the LSDIS lab at University of Georgia have played a significant role in advancing the state of research in the areas of workflow management, semantic Web services and service oriented computing. Starting with the METEOR workflow management system in the 90's, researchers have addressed key issues in the area of semantic Web services and more recently, in the domain of RESTful services and Web 2.0. In this article, we present a brief discussion on the various contributions of METEOR-S including SAWSDL, publication and discovery of semantic Web services, data mediation, dynamic configuration …