Computer Sciences Commons^™

Infusing Machine Learning And Computational Linguistics Into Clinical Notes, Funke V. Alabi, Onyeka Omose, Omotomilola Jegede

Mathematics & Statistics Faculty Publications

Entering free-form text notes into Electronic Health Records (EHR) systems takes a lot of time from clinicians. A large portion of this paper work is viewed as a burden, which cuts into the amount of time doctors spend with patients and increases the risk of burnout. We will see how machine learning and computational linguistics can be infused in the processing of taking clinical notes. We are presenting a new language modeling task that predicts the content of notes conditioned on historical data from a patient's medical record, such as patient demographics, lab results, medications, and previous notes, with the …

The Flesh And Silicon Mesh: A New Materialist Conception Of Advanced Digital Machines, Joshua Nieubuurt

English Faculty Publications

Digital machines, including artificial intelligence (AI), have long been held as potential agents of social change. From their binary role in cultural productions to the real-world implementation of such, digital machines have typically been considered within the Heideggerian “readiness-to-hand” category of Being. This paper seeks to alter conceptually this dynamic through the use of new materialism and Morton’s concept of the “mesh” to provide a new understanding of the social and pragmatic roles advanced digital machines play in ecologies in which they dwell and continue to emerge. Through briefly tracing the complex intermingling of advanced digital machines in the realms …

Machine-Learning-Enabled Diagnostics With Improved Visualization Of Disease Lesions In Chest X-Ray Images, Md. Fashiar Rahman, Tzu-Liang (Bill) Tseng, Michael Pokojovy, Peter Mccaffrey, Eric Walser, Scott Moen, Alex Vo, Johnny C. Ho

Mathematics & Statistics Faculty Publications

The class activation map (CAM) represents the neural-network-derived region of interest, which can help clarify the mechanism of the convolutional neural network’s determination of any class of interest. In medical imaging, it can help medical practitioners diagnose diseases like COVID-19 or pneumonia by highlighting the suspicious regions in Computational Tomography (CT) or chest X-ray (CXR) film. Many contemporary deep learning techniques only focus on COVID-19 classification tasks using CXRs, while few attempt to make it explainable with a saliency map. To fill this research gap, we first propose a VGG-16-architecture-based deep learning approach in combination with image enhancement, segmentation-based region …

The Educational Affordances And Challenges Of Chatgpt: State Of The Field, Helen Crompton, Diane Burke

STEMPS Faculty Publications

ChatGPT was released to the public in November 30, 2022. This study examines how ChatGPT can be used by educators and students to promote learning and what are the challenges and limitations. This study is unique in providing one of the first systematic reviews using peer review studies to provide an early examination of the field. Using PRISMA principles, 44 articles were selected for review. Grounded coding was then used to reveal trends in the data. The findings show that educators can use ChatGPT for teaching support, task automation, and professional development. These were further delineated further by axial sub …

Digitalization Of Railway Transportation Through Ai-Powered Services: Digital Twin Trains, Salih Sarp, Murat Kuzlu, Vukica Jovanovic, Zekeriya Polat, Ozgur Guler

Engineering Technology Faculty Publications

Digitalization is a key concept that transformed the various industries through technologies like Internet of Things (IoT), Artificial Intelligence (AI), and Digital Twin (DT). Although innovations provided by the advancement of digitalization have paved the way for more efficient operations and products for transportation, the rail transportation sector struggles to keep up with the rest of the transportation industry, since trains are designed to last for decades, and the insufficient infrastructure investment leads to multiple railroad derailments across the globe. Therefore, the primary aim is to transform current railway systems into human-centric, adaptable, sustainable and future-proof networks, aligning with Industry …

A Generative Approach For Document Enhancement With Small Unpaired Data, Mohammad Shahab Uddin, Wael Khallouli, Andres Sousa-Poza, Samuel Kovacic, Jiang Li

Engineering Management & Systems Engineering Faculty Publications

Shipbuilding drawings, crafted manually before the digital era, are vital for historical reference and technical insight. However, their digital versions, stored as scanned PDFs, often contain significant noise, making them unsuitable for use in modern CAD software like AutoCAD. Traditional denoising techniques struggle with the diverse and intense noise found in these documents, which also does not adhere to standard noise models. In this paper, we propose an innovative generative approach tailored for document enhancement, particularly focusing on shipbuilding drawings. For a small, unpaired dataset of clean and noisy shipbuilding drawing documents, we first learn to generate the noise in …

Diffusion Model Approach To Simulating Electron-Proton Scattering Events, Peter Devlin, Jian-Wei Qiu, Felix Ringer, Nobuo Sato

Physics Faculty Publications

Generative artificial intelligence is a fast-growing area of research offering various avenues for exploration in high-energy nuclear physics. In this work, we explore the use of generative models for simulating electron-proton collisions relevant to experiments like the Continuous Electron Beam Accelerator Facility and the future Electron-Ion Collider (EIC). These experiments play a critical role in advancing our understanding of nucleons and nuclei in terms of quark and gluon degrees of freedom. The use of generative models for simulating collider events faces several challenges such as the sparsity of the data, the presence of global or eventwide constraints, and steeply falling …

Ai Trustworthy: Ethical Challenges And Strategies, Jian Liu, Iwan Sandjaja, Donald C. Wunsch

Electrical and Computer Engineering Faculty Research & Creative Works

This paper explores the pivotal role of trust in the widespread application of Artificial Intelligence (AI) across various domains. We review AI applications in sectors like energy, healthcare, and autonomous vehicles and discuss the crisis of human trust they face. This paper introduces a novel framework that delineates the relationship between AI transparency and user trust, highlighting specific industry applications. Through a systematic review of recent literature, we first delve into factors such as emotional response, acceptance, transparency, accuracy, and interpretability that shape human trust in AI. We then underscore the necessity of ethical AI practices and highlight the importance …

A Comparison Of Lexical Tokenization Methods, Nathan Culmer

Williams Honors College, Honors Research Projects

The purpose of this project was to compare tokenization methods, or methods of breaking up a text into meaningful parts for use in natural language processing. The effectiveness of several commonly used tokenization methods were investigated, including morpheme tokenization, which takes into account the linguistic features of the language. In addition, I proposed and implemented a new technique to consider the capitalization pattern of a word in the tokenization process, in order to allow this process to include more natural language features. The effectiveness of these methods was compared by using them in a sentiment analysis model for various datasets, …

Music Recommendation Using Exemplars And Contrastive Learning, Tina Tran

Honors Undergraduate Theses

The popularity of AI audio applications is growing, it is used in chatbots, automated voice translation, virtual assistants, and text-to-speech translation. Audio classification is crucial in today’s world with a growing need to sort and classify millions of existing audio data with increasing amounts of new data uploaded over time. In the area of classification lies the difficult and lucrative problem of music recommendation. Research in music recommendation has trended over time towards collaborative-based approaches utilizing large amounts of user data. These approaches tend to deal with the cold-start problem of insufficient data and are costly to train. We look …

Uncertainty Quantification In Large Language Models Through Convex Hull Analysis, Ferhat Ozgur Catak, Murat Kuzlu

Engineering Technology Faculty Publications

Uncertainty quantification approaches have been more critical in large language models (LLMs), particularly high-risk applications requiring reliable outputs. However, traditional methods for uncertainty quantification, such as probabilistic models and ensemble techniques, face challenges when applied to the complex and high-dimensional nature of LLM-generated outputs. This study proposes a novel geometric approach to uncertainty quantification using convex hull analysis. The proposed method leverages the spatial properties of response embeddings to measure the dispersion and variability of model outputs. The prompts are categorized into three types, i.e., ’easy’, ’moderate’, and ’confusing’, to generate multiple responses using different LLMs at varying temperature settings. …

33. Chatgpt Assistance In Creating Chemistry Practice Problems: Pitfalls, Positives, And Possibilities, Michael A. Christiansen

Teaching and Generative AI: Pedagogical Possibilities and Productive Tensions

ChatGPT, a relatively new Large Language Model (LLM) artificial intelligence (Al) chatbot, has gained significant attention as the most downloaded software app, accruing over 100 million users within two months of its release. This software can generate quick, articulate responses to virtually any textual query. Many educators are concerned about its potential for enabling student cheating. However, it currently suffers significant limitations in solving chemistry problems-documented through peer-reviewed articles and from the author's experience suggesting that chemistry students will perform far better, on average, by studying than by relying on ChatGPT. This is particularly true of math-centric problems, which the …

22. Examining Ways Of Using Ai To Better Support Teaching Faculty, Mitigate Burnout, And Increase Teaching Creativity, Jennifer Grewe

Teaching and Generative AI: Pedagogical Possibilities and Productive Tensions

Faculty burnout is a concern within academics particularly for the most student-centered teaching faculty. In attempts to support students, faculty can sometimes do so at the expense of their own time and energy that over time can become overwhelming. There exist many concerns within academia on the use of Al and yet this is a tool that could be helpful to teaching loads if utilized properly. This chapter explores ways in which Al might help alleviate some of the workload that teaching faculty experience, which is a start to addressing burnout issues. Ideas are shared in this chapter surrounding Al's …

17. Epistemological Clash: Ai And Ways Of Knowing, Emma Mecham

Teaching and Generative AI: Pedagogical Possibilities and Productive Tensions

AI highlights important epistemological debates, particularly for Indigenous communities

9. Uses, Benefits, And Limitations Of Ai Chatbots: Implementing Chatgpt In The First-Year Writing Classroom, Walker Smith, Cora Alward, Jacob Morris, Lydia Peach, Veronica Pulley, Parker Routt, Kolby Sanders, Josh Vogeler

Teaching and Generative AI: Pedagogical Possibilities and Productive Tensions

This essay shares the findings of a Spring 2023 honors composition course in which students conducted their own primary research project to investigate the uses and limitations of ChatGPT for first-year writers. By experimenting with integrating ChatGPT into various stages of their writing and revision processes, the students identified the strengths and weaknesses of the writing tool. Then, they observed and interviewed faculty as they graded different versions of essay drafts with varying levels of ChatGPT assistance. Ultimately, they found that ChatGPT was incredibly useful for certain small-scale tasks, but posed significant risks, especially for students with less experience in …

Artificial Intelligence And News Consumption: A Study Of Trust, Credibility And Transparency In Automated Journalism, Julia Lobo Paes

Dissertations and Theses

According to Gallup poll (2023), over the last 50 years there has been a decline in how much Americans trust mass media. While in the 1970’s 72% of the population responded that they trust the media a 'great deal/fair amount', this number dropped to 34% in 2023. Given the decreasing public trust in news, this thesis focused particularly on analyzing trust in the organization, trust in the news story and perceived credibility in AI generative content. In addition to articles created by AI, this study also aimed to analyze how the public perceives information that has been personalized and distributed …

An Overview Of The Relationships Between The Food Industry And Nanotechnology, Mehdi Koushki, Nasrin Amiri-Dashatan, Hossein Pourghadamyari, Hadi Khodabandehloo, Fatemeh Bagheri, Masoumeh Farahani, Lobat Tayebi

Electrical & Computer Engineering Faculty Publications

Background and Objective: Due to the growth of the global population, food demands are increasing. Hence, the need to develop more efficient methods for producing better quality, safer, and more sustainable food seems essential. In the past decades, the use of nanoscale materials has increased greatly due to the unique chemical, physical, and biological characteristics of nanomaterials compared to bulk materials. This research presents nanotechnology role in improving sensorial properties (taste, appearance, and texture) and safety aspects as well as processing and packaging of foods. The use of nano-omics-based technologies and artificial intelligence-nanotechnology-based technologies in the food industry is also …

"Ai's Pompous Vocabulary Sounds Like It's Trying To Impress Someone": Preservice Teachers' Respond To Ai Reviews Of Their Writing, Jennifer Kidd, Keri Parker, Samantha Myers

Teaching & Learning Faculty Publications

This study examines pre-service teachers’ (PSTs’) responses to using AI to review their writing. As part of a class activity, PSTs prompted an AI-chatbot for feedback and revisions on a short essay based on a provided assignment rubric. Afterward, they reflected on the pros and cons of using AI in this way. While some PSTs initially encountered functionality issues, all were able to obtain feedback and the majority reported finding it useful. In general, the PSTs appreciated AI’s speed and expertise and the potential to customize feedback based on their needs. However, many were skeptical of AI’s evaluation of their …

Locating Liability For Medical Ai, W. Nicholson Price Ii, I. Glenn Cohen

Articles

When medical AI systems fail, who should be responsible, and how? We argue that various features of medical AI complicate the application of existing tort doctrines and render them ineffective at creating incentives for the safe and effective use of medical AI. In addition to complexity and opacity, the problem of contextual bias, where medical AI systems vary substantially in performance from place to place, hampers traditional doctrines. We suggest instead the application of enterprise liability to hospitals—making them broadly liable for negligent injuries occurring within the hospital system—with an important caveat: hospitals must have access to the information needed …

Diagnostic Performance Of Ai-Based Models Versus Physicians Among Patients With Hepatocellular Carcinoma: A Systematic Review And Meta-Analysis, Feras Al-Obeidat, Wael Hafez, Muneir Gador, Nesma Ahmed, Marwa Muhammed Abdeljawad, Antesh Yadav, Asrar Rashed

All Works

Background: Hepatocellular carcinoma (HCC) is a common primary liver cancer that requires early diagnosis due to its poor prognosis. Recent advances in artificial intelligence (AI) have facilitated hepatocellular carcinoma detection using multiple AI models; however, their performance is still uncertain. Aim: This meta-analysis aimed to compare the diagnostic performance of different AI models with that of clinicians in the detection of hepatocellular carcinoma. Methods: We searched the PubMed, Scopus, Cochrane Library, and Web of Science databases for eligible studies. The R package was used to synthesize the results. The outcomes of various studies were aggregated using fixed-effect and random-effects models. …

An Enhanced Real-Time Intrusion Detection Framework Using Federated Transfer Learning In Large-Scale Iot Networks, Khawlah Harahsheh, Malek Alzaqebah, Chung-Hao Chen

Electrical & Computer Engineering Faculty Publications

The exponential growth of Internet of Things (IoT) devices has introduced critical security challenges, particularly in scalability, privacy, and resource constraints. Traditional centralized intrusion detection systems (IDS) struggle to address these issues effectively. To overcome these limitations, this study proposes a novel Federated Transfer Learning (FTL)-based intrusion detection framework tailored for large-scale IoT networks. By integrating Federated Learning (FL) with Transfer Learning (TL), the framework enhances detection capabilities while ensuring data privacy and reducing communication overhead. The hybrid model incorporates convolutional neural networks (CNNs), bidirectional gated recurrent units (BiGRUs), attention mechanisms, and ensemble learning. To address the class imbalance, Synthetic …

Ai And Ml-Based Risk Assessment Of Chemicals: Predicting Carcinogenic Risk From Chemical-Induced Genomic Instability, Ajay Vikram Singh, Preeti Bhardwaj, Peter Laux, Prachi Pradeep, Madleen Busse, Andreas Luch, Akihiko Hirose, Christopher J. Osgood, Michael W. Stacey

Biological Sciences Faculty Publications

Chemical risk assessment plays a pivotal role in safeguarding public health and environmental safety by evaluating the potential hazards and risks associated with chemical exposures. In recent years, the convergence of artificial intelligence (AI), machine learning (ML), and omics technologies has revolutionized the field of chemical risk assessment, offering new insights into toxicity mechanisms, predictive modeling, and risk management strategies. This perspective review explores the synergistic potential of AI/ML and omics in deciphering clastogen-induced genomic instability for carcinogenic risk prediction. We provide an overview of key findings, challenges, and opportunities in integrating AI/ML and omics technologies for chemical risk assessment, …

The Right To A Glass Box: Rethinking The Use Of Artificial Intelligence In Criminal Justice, Brandon L. Garrett, Cynthia Rudin

Faculty Scholarship

Artificial intelligence (“AI”) increasingly is used to make important decisions that affect individuals and society. As governments and corporations use AI more pervasively, one of the most troubling trends is that developers so often design it to be a “black box.” Designers create AI models too complex for people to understand or they conceal how AI functions. Policymakers and the public increasingly sound alarms about black box AI. A particularly pressing area of concern has been criminal cases, in which a person’s life, liberty, and public safety can be at stake. In the United States and globally, despite concerns that …

Artificial Intelligence For The Electron Ion Collider (Ai4eic), C. Allaire, R. Ammendola, E.-C. Aschenauer, M. Balandat, M. Battaglieri, J. Bernauer, M. Bondì, N. Branson, T. Britton, A. Butter, I. Chahrour, P. Chatagnon, E. Cisbani, E. W. Cline, S. Dash, C. Dean, W. Deconinck, A. Deshpande, M. Diefenthaler, R. Ent, C. Fanelli, M. Finger, M. Finger Jr., E. Fol, S. Furletov, Y. Gao, J. Giroux, N. C. Gunawardhana Waduge, O. Hassan, P. L. Hegde, R. J. Hernandez-Pinto, A. Hiller Blin, T. Horn, J. Huang, A. Jalotra, D. Jayakodige, B. Joo, M. Junaid, N. Kalantarians, P. Karande, B. Kriesten, R. Kunnawalkam Elayavalli, Y. Li, M. Lin, F. Liu, S. Liuti, G. Matousek, M. Mceneaney, D. Mcspadden, T. Menzo, T. Miceli, V. Mikuni, R. Montgomery, B. Nachman, R. R. Nair, J. Niestroy, S. A. Ochoa Oregon, J. Oleniacz, J. D. Osborn, C. Paudel, C. Pecar, C. Peng, G. N. Perdue, W. Phelps, M. L. Purschke, H. Rajendran, K. Rajput, Y. Ren, D. F. Renteria-Estrada, D. Richford, B. J. Roy, D. Roy, A. Saini, N. Sato, T. Satogata, G. Sborlini, M. Schram, D. Shih, J. Singh, R. Singh, A. Siodmok, J. Stevens, P. Stone, L. Suarez, K. Suresh, A. -N. Tawfik, F. Torales Acosta, N. Tran, R. Trotta, F. J. Twagirayezu, R. Tyson, S. Volkova, A. Vossen, E. Walter, D. Whiteson, M. Williams, S. Wu, N. Zachariou, P. Zurita

Computer Science Faculty Publications

The Electron-Ion Collider (EIC), a state-of-the-art facility for studying the strong force, is expected to begin commissioning its first experiments in 2028. This is an opportune time for artificial intelligence (AI) to be included from the start at this facility and in all phases that lead up to the experiments. The second annual workshop organized by the AI4EIC working group, which recently took place, centered on exploring all current and prospective application areas of AI for the EIC. This workshop is not only beneficial for the EIC, but also provides valuable insights for the newly established ePIC collaboration at EIC. …

Short: Can Citations Tell Us About A Paper's Reproducibility? A Case Study Of Machine Learning Papers, Rochana R. Obadage, Sarah M. Rajtmajer, Jian Wu

Computer Science Faculty Publications

The iterative character of work in machine learning (ML) and artificial intelligence (AI) and reliance on comparisons against benchmark datasets emphasize the importance of reproducibility in that literature. Yet, resource constraints and inadequate documentation can make running replications particularly challenging. Our work explores the potential of using downstream citation contexts as a signal of reproducibility. We introduce a sentiment analysis framework applied to citation contexts from papers involved in Machine Learning Reproducibility Challenges in order to interpret the positive or negative outcomes of reproduction attempts. Our contributions include training classifiers for reproducibility-related contexts and sentiment analysis, and exploring correlations between …

Enhanced Skin Cancer Diagnosis Through Grid Search Algorithm-Optimized Deep Learning Models For Skin Lesion Analysis, Rudresh Pillai, Neha Sharma, Sheifali Gupta, Deepali Gupta, Sapna Juneja, Saurav Malik, Hong Qin, Mohammed S. Alqahtani, Amel Ksibi

Computer Science Faculty Publications

Skin cancer is a widespread and perilous disease that necessitates prompt and precise detection for successful treatment. This research introduces a thorough method for identifying skin lesions by utilizing sophisticated deep learning (DL) techniques. The study utilizes three convolutional neural networks (CNNs)-CNN1, CNN2, and CNN3-each assigned to a distinct categorization job. Task 1 involves binary classification to determine whether skin lesions are present or absent. Task 2 involves distinguishing between benign and malignant lesions. Task 3 involves multiclass classification of skin lesion images to identify the precise type of skin lesion from a set of seven categories. The most optimal …

Autonomous Strike Uavs In Support Of Homeland Security Missions: Challenges And Preliminary Solutions, Meshari Aljohani, Ravi Mukkamala, Stephan Olariu

Computer Science Faculty Publications

Unmanned Aerial Vehicles (UAVs) are becoming crucial tools in modern homeland security applications, primarily because of their cost-effectiveness, risk reduction, and ability to perform a wider range of activities. This study focuses on the use of autonomous UAVs to conduct, as part of homeland security applications, strike missions against high-value terrorist targets. Owing to developments in ledger technology, smart contracts, and machine learning, activities formerly carried out by professionals or remotely flown UAVs are now feasible. Our study provides the first in-depth analysis of the challenges and preliminary solutions for the successful implementation of an autonomous UAV mission. Specifically, we …

Charged Track Reconstruction With Artificial Intelligence For Clas12, Gagik Gavalian, Polykarpos Thomadakis, Angelos Angelopoulos, Nikos Chrisochoides

Computer Science Faculty Publications

In this paper, we present the results of charged particle track reconstruction in CLAS12 using artificial intelligence. In our approach, we use neural networks working together to identify tracks based on the raw signals in the Drift Chambers. A Convolutional Auto-Encoder is used to de-noise raw data by removing the hits that do not satisfy the patterns for tracks, and second Multi-Layer Perceptron is used to identify tracks from combinations of clusters in the drift chambers. Our method increases the tracking efficiency by 50% for multi-particle final states already conducted experiments. The de-noising results indicate that future experiments can run …

A Use Case Of Chatgpt: Summary Of An Expert Panel Discussion On Electronic Health Records And Implementation Science, Seppo T Rinne, Julian Brunner, Timothy P Hogan, Jacqueline M Ferguson, Drew A Helmer, Sylvia J Hysong, Grace Mckee, Amanda Midboe, Megan E Shepherd-Banigan, A Rani Elwy

Center for Medical Ethics and Health Policy Staff Publications

Objective: Artificial intelligence (AI) is revolutionizing healthcare, but less is known about how it may facilitate methodological innovations in research settings. In this manuscript, we describe a novel use of AI in summarizing and reporting qualitative data generated from an expert panel discussion about the role of electronic health records (EHRs) in implementation science.

Materials and methods: 15 implementation scientists participated in an hour-long expert panel discussion addressing how EHRs can support implementation strategies, measure implementation outcomes, and influence implementation science. Notes from the discussion were synthesized by ChatGPT (a large language model-LLM) to generate a manuscript summarizing the discussion, …

Research And Development Of Simulation Training Platform For Multi-Agent Collaborative Decision-Making, Cheng Cheng, Zhijie Chen, Ziming Guo, Ni Li

Journal of System Simulation

Abstract: Reinforcement learning simulation platform can be an interactive and training environment for reinforcement learning. In order to make the simulation platform compatible with the multi-agent reinforcement learning algorithms and meet the needs of simulation in military field, the similar processes in multi-agent reinforcement learning algorithms are refined and a unified interface is designed to embed and verify different types of deep reinforcement learning algorithms on the simulation platform and to optimize the back-end service of the simulation platform to accelerate the training process of the algorithm model. The experimental results show that, by unifing the interface, the simulation platform …