Computer Sciences Commons^™

Construction Of A Repeatable Framework For Prostate Cancer Lesion Binary Semantic Segmentation Using Convolutional Neural Networks, Ian Vincent O. Mirasol, Patricia Angela R. Abu, Rosula Sj Reyes

Department of Information Systems & Computer Science Faculty Publications

Prostate cancer is the 3rd most diagnosed cancer overall. Current screening methods such as the prostate-specific antigen test could result in overdiagonosis and overtreatment while other methods such as a transrectal ultrasonography are invasive. Recent medical advancements have allowed the use of multiparametric MRI — a noninvasive and reliable screening process for prostate cancer. However, assessment would still vary from different professionals introducing subjectivity. While con-volutional neural network has been used in multiple studies to ob-jectively segment prostate lesions, due to the sensitivity of datasets and varying ground-truth established used in these studies, it is not possible to reproduce and …

Service Contracting As A Policy Response For Public Transport Recovery During The Covid-19 Pandemic: A Preliminary Evaluation, Varsolo Sunio, Wilhansen Joseph Li, Joemier Pontawe, Albert Dizon, Joel Bienne Valderrama, Agnes Robang

Department of Information Systems & Computer Science Faculty Publications

We examine and assess the service contracting (SC) program implemented for the first time in Metro Manila, Philippines as a response to the impact of the pandemic on road-based public transport sector. We develop an evaluation framework, consisting of three indicators: social amelioration, increase in transport supply and performance improvement. These indicators are the purported objectives of SC. Using a mix of qualitative and quantitative methods, our evaluation suggests that although SC has brought positive impact in terms of the first two indicators, there is no robust evidence so far that may suggest that SC has improved the performance of …

Dynamic Task Allocation And Understanding Of Situation Awareness Under Different Levels Of Autonomy In Closed-Hatch Military Vehicles Using Virtual Reality, Jessie E. Cossitt

Link Foundation Modeling, Simulation and Training Fellowship Reports

The current state of the art in autonomous vehicles is partial autonomy, and to optimize the use of these vehicles, it is essential to understand the interactions between the vehicles and their operators. Partially autonomous vehicles require operators to perform parts of the driving task and to be alert and ready to take over full control of the vehicle at any point. Due to the requirements on the human operator, it is necessary to know how the operators' abilities are impacted by the amount of autonomy present in the system. There are known effects of autonomous systems on performance, cognitive …

Correlations And Reuse For Fast And Accurate Physically Based Light Transport, Benedikt Bitterli

Dartmouth College Ph.D Dissertations

Light transport is the study of the transfer of light between emitters, surfaces, media and sensors. Fast simulations of light transport play a pivotal role in photo-realistic image synthesis, and find many applications today, including predictive manufacturing, machine learning, scientific visualization and the movie industry. In order to accurately reproduce the appearance of real scenes, light transport must closely approximate the physical laws governing the flow of light. Physically based rendering is a set of principles for codifying these laws into a mathematical model, and is the predominant rendering methodology today.

The representational power of this model is limited to …

Building An Understanding Of Human Activities In First Person Video Using Fuzzy Inference, Bradley A. Schneider

Browse all Theses and Dissertations

Activities of Daily Living (ADL’s) are the activities that people perform every day in their home as part of their typical routine. The in-home, automated monitoring of ADL’s has broad utility for intelligent systems that enable independent living for the elderly and mentally or physically disabled individuals. With rising interest in electronic health (e-Health) and mobile health (m-Health) technology, opportunities abound for the integration of activity monitoring systems into these newer forms of healthcare. In this dissertation we propose a novel system for describing ’s based on video collected from a wearable camera. Most in-home activities are naturally defined by …

Secure Authenticated Key Exchange For Enhancing The Security Of Routing Protocol For Low-Power And Lossy Networks, Sarah Mohammed Alzahrani

Browse all Theses and Dissertations

The current Routing Protocol for Low Power and Lossy Networks (RPL) standard provides three security modes Unsecured Mode (UM), Preinstalled Secure Mode (PSM), and Authenticated Secure Mode (ASM). The PSM and ASM are designed to prevent external routing attacks and specific replay attacks through an optional replay protection mechanism. RPL's PSM mode does not support key replacement when a malicious party obtains the key via differential cryptanalysis since it considers the key to be provided to nodes during the configuration of the network. This thesis presents an approach to implementing a secure authenticated key exchange mechanism for RPL, which ensures …

Realistic Virtual Human Character Design Strategy And Experience For Supporting Serious Role-Playing Simulations On Mobile Devices, Sindhu Kumari

Browse all Theses and Dissertations

Promoting awareness of social determinants of health (SDoH) among healthcare providers is important to improve the patient care experience and outcome as it helps providers understand their patients in a better way which can facilitate more efficient and effective communication about health conditions. Healthcare professionals are typically educated about SDoH through lectures, questionaries, or role-play-based approaches; but in today’s world, it is becoming increasingly possible to leverage modern technology to create more impactful and accessible tools for SDoH education. Wright LIFE (Lifelike Immersion for Equity) is a simulation-based training tool especially created for this purpose. It is a mobile app …

Design, Analysis, And Optimization Of Traffic Engineering For Software Defined Networks, Mohammed Ibrahim Salman

Browse all Theses and Dissertations

Network traffic has been growing exponentially due to the rapid development of applications and communications technologies. Conventional routing protocols, such as Open-Shortest Path First (OSPF), do not provide optimal routing and result in weak network resources. Optimal traffic engineering (TE) is not applicable in practice due to operational constraints such as limited memory on the forwarding devices and routes oscillation. Recently, a new way of centralized management of networks enabled by Software-Defined Networking (SDN) made it easy to apply most traffic engineering ideas in practice. \par Toward creating an applicable traffic engineering system, we created a TE simulator for experimenting …

Automatically Generating Searchable Fingerprints For Wordpress Plugins Using Static Program Analysis, Chuang Li

Browse all Theses and Dissertations

This thesis introduces a novel method to automatically generate fingerprints for WordPress plugins. Our method performs static program analysis using Abstract Syntax Trees (ASTs) of WordPress plugins. The generated fingerprints can be used for identifying these plugins using search engines, which have support critical applications such as proactively identifying web servers with vulnerable WordPress plugins. We have used our method to generate fingerprints for over 10,000 WordPress plugins and analyze the resulted fingerprints. Our fingerprints have also revealed 453 websites that are potentially vulnerable. We have also compared fingerprints for vulnerable plugins and those for vulnerability-free plugins.

Semantics-Driven Abstractive Document Summarization, Amanuel Alambo

Browse all Theses and Dissertations

The evolution of the Web over the last three decades has led to a deluge of scientific and news articles on the Internet. Harnessing these publications in different fields of study is critical to effective end user information consumption. Similarly, in the domain of healthcare, one of the key challenges with the adoption of Electronic Health Records (EHRs) for clinical practice has been the tremendous amount of clinical notes generated that can be summarized without which clinical decision making and communication will be inefficient and costly. In spite of the rapid advances in information retrieval and deep learning techniques towards …

Development Of Enhanced User Interaction And User Experience For Supporting Serious Role-Playing Games In A Healthcare Setting, Mark Lee Alow

Browse all Theses and Dissertations

Education about implicit bias in clinical settings is essential for improving the quality of healthcare for underrepresented groups. Such a learning experience can be delivered in the form of a serious game simulation. WrightLIFE (Lifelike Immersion for Equity) is a project that combines two serious game simulations, with each addressing the group that faces implicit bias. These groups are individuals that identify as LGBTQIA+ and people with autism spectrum disorder (ASD). The project presents healthcare providers with a training tool that puts them in the roles of the patient and a medical specialist and immerses them in social and clinical …

A Comparison Of Stacking Methods To Estimate Survival Using Residual Lifetime Data From Prevalent Cohort Studies, Zhaoheng Li

Mathematics, Statistics, and Computer Science Honors Projects

Prevalent cohort studies are widely used for their cost-efficiency and convenience. However, in such studies, only the residual lifetime can be observed. Traditionally, researchers rely on self-reported onset times to infer the underlying survival distribution, which may introduce additional bias that confounds downstream analysis. This study compares two stacking procedures and one mixture model approach that uses only residual lifetime data while leveraging the strengths of different estimators. Our simulation results show that the two stacked estimators outperform the nonparametric maximum likelihood estimator (NPMLE) and the mixture model, allowing robust and accurate estimations for underlying survival distributions.

Deep Understanding Of Technical Documents : Automated Generation Of Pseudocode From Digital Diagrams & Analysis/Synthesis Of Mathematical Formulas, Nikolaos Gkorgkolis

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The technical document is an entity that consists of several essential and interconnected parts, often referred to as modalities. Despite the extensive attention that certain parts have already received, per say the textual information, there are several aspects that severely under researched. Two such modalities are the utility of diagram images and the deep automated understanding of mathematical formulas. Inspired by existing holistic approaches to the deep understanding of technical documents, we develop a novel formal scheme for the modelling of digital diagram images. This extends to a generative framework that allows for the creation of artificial images and their …

Guest Editorial: Introduction To Aoir 2021 Papers On Emerging Ethical Practices And Platform Challenges, Michael Zimmer

Computer Science Faculty Research and Publications

No abstract provided.

A Low-Cost Machine Learning Based Network Intrusion Detection System With Data Privacy Preservation, Jyoti Fakirah, Lauhim Mahfuz Zishan, Roshni Mooruth, Michael L. Johnstone, Wencheng Yang

Annual ADFSL Conference on Digital Forensics, Security and Law

Network intrusion is a well-studied area of cyber security. Current machine learning-based network intrusion detection systems (NIDSs) monitor network data and the patterns within those data but at the cost of presenting significant issues in terms of privacy violations which may threaten end-user privacy. Therefore, to mitigate risk and preserve a balance between security and privacy, it is imperative to protect user privacy with respect to intrusion data. Moreover, cost is a driver of a machine learning-based NIDS because such systems are increasingly being deployed on resource-limited edge devices. To solve these issues, in this paper we propose a NIDS …

Human-Controlled Fuzzing With Afl, Maxim Grishin, Igor Korkin, Phd

Annual ADFSL Conference on Digital Forensics, Security and Law

Fuzzing techniques are applied to reveal different types of bugs and vulnerabilities. American Fuzzy Lop (AFL) is a free most popular software fuzzer used by many other fuzzing frameworks. AFL supports autonomous mode of operation that uses the previous step output into the next step, as a result fuzzer spends a lot of time analyzing minor code sections. By making fuzzing process more focused and human controlled security expert can save time and find more bugs in less time. We designed a new module that can fuzz only the specified functions. As a result, the chosen ones will be inspected …

The Amorphous Nature Of Hackers: An Exploratory Study, Kento Yasuhara, Daniel Walnycky, Ibrahim Baggili, Ahmed Alhishwan

Annual ADFSL Conference on Digital Forensics, Security and Law

In this work, we aim to better understand outsider perspectives of the hacker community through a series of situation based survey questions. By doing this, we hope to gain insight into the overall reputation of hackers from participants in a wide range of technical and non-technical backgrounds. This is important to digital forensics since convicted hackers will be tried by people, each with their own perception of who hackers are. Do cyber crimes and national security issues negatively affect people’s perceptions of hackers? Does hacktivism and information warfare positively affect people’s perception of hackers? Do individual personality factors affect one’s …

Virtual Machine Introspection Tool Design Analysis, Justin Martin

Dissertations, Master's Theses and Master's Reports

Virtual machines are an integral part of today’s computing world. Their use is widespread and applicable in many different computing fields. With virtual machines, the ability to introspect and monitor is often overlooked or left unimplemented. Introspection is used to gather information about the state of virtual machines as they operate. Without introspection, verbose log data and state information is unavailable after unexpected errors or crashes occur. With introspection, this data can be analyzed further to determine the true cause of the unexpected crash or error. Therefore, introspection plays a critical role in portraying accurate historical information regarding the operating …

On-Ice Detection, Classification, Localization And Tracking Of Anthropogenic Acoustic Sources With Machine Learning, Steven J. Whitaker

Dissertations, Master's Theses and Master's Reports

Arctic acoustics have been of concern in recent years for the US navy. First-year ice is now the prevalent factor in ice coverage in the Arctic, which changes the previously understood acoustic properties. Due to the ice melting each year, anthropogenic sources in the Arctic region are more common: military exercises, shipping, and tourism. For the navy, it is of interest to detect, classify, localize, and track these sources to have situational awareness of these surroundings. Because the sources are on-water or on-ice, acoustic radiation propagates at a longer distance and so acoustics are the method by which the sources …

Synthetic Augmentation Methods For Object Detection In Overhead Imagery, Nicholas R. Hamilton

Dissertations, Master's Theses and Master's Reports

The multidisciplinary area of geospatial intelligence (GEOINT) is continually changing and becoming more complex. From efforts to automate portions of GEOINT using machine learning, which augment the analyst and improve exploitation, to optimizing the growing number of sources and variables, there is no denying that the strategies involved in this collection method are rapidly progressing. The unique and inherent complexities involved in imagery analysis from an overhead perspective--—e.g., target resolution, imaging band(s), and imaging angle--—test the ability of even the most developed and novel machine learning techniques. To support advancement in the application of object detection in overhead imagery, we …

The Two-Echelon Vehicle Routing Problem With Transshipment Nodes And Occasional Drivers: Formulation And Adaptive Large Neighborhood Search Heuristic, Vincent F. Yu, Minh P. K. Nguyen, Kuza Putra, Aldy Gunawan, I. Gusti Bagus Budi Dharma

Research Collection School Of Computing and Information Systems

This research introduces a new variant of the two-echelon vehicle routing problem (2EVRP) called the two-echelon vehicle routing problem with transshipment nodes and occasional drivers (2EVRP-TN-OD). In addition to city freighters in the second-echelon network, a set of occasional drivers (ODs) is available to serve customers. ODs are the basis of a crowd-shipping system in which crowds with planned trips are willing to take detours to deliver packages in exchange for some compensation. To serve customers, ODs collect the assigned packages at either satellite served by first-echelon trucks or transshipment nodes served by city freighters. We formulate this problem as …

Graph Neural Networks For Malware Classification, Vrinda Malhotra

Master's Projects

Malware is a growing threat to the digital world. The first step to managing this threat is malware detection and classification. While traditional techniques rely on static or dynamic analysis of malware, the generation of these features requires expert knowledge. Function call graphs (FCGs) consist of program functions as their nodes and their interprocedural calls as their edges, providing a wealth of knowledge that can be utilized to classify malware without feature extraction that requires experts. This project treats malware classification as a graph classification problem, setting node features using the Local Degree Profile (LDP) model and using different graph …

Adversarial Attacks On Android Malware Detection And Classification, Srilekha Nune

Master's Projects

Recent years have seen an increase in sales of intelligent gadgets, particularly those using the Android operating system. This popularity has not gone unnoticed by malware writers. Consequently, many research efforts have been made to develop learning models that can detect Android malware. As a countermeasure, malware writers can consider adversarial attacks that disrupt the training or usage of such learning models. In this paper, we train a wide variety of machine learning models using the KronoDroid Android malware dataset, and we consider adversarial attacks on these models. Specifically, we carefully measure the decline in performance when the feature sets …

Whole File Chunk Based Deduplication Using Reinforcement Learning, Xincheng Yuan

Master's Projects

Deduplication is the process of removing replicated data content from storage facilities like online databases, cloud datastore, local file systems, etc., which is commonly performed as part of data preprocessing to eliminate redundant data that requires unnecessary storage spaces and computing power. Deduplication is even more specifically essential for file backup systems since duplicated files will presumably consume more storage space, especially with a short backup period like daily [8]. A common technique in this field involves splitting files into chunks whose hashes can be compared using data structures or techniques like clustering. In this project we explore the possibility …

Poriferal Vision: Deep Transfer Learning-Based Sponge Spicules Identification & Taxonomic Classification, Sudhin Domala

Master's Projects

The phylum Porifera includes the aquatic organisms known as sponges. Sponges are classified into four classes: Calcarea, Hexactinellida, Demospongiae, and Homoscleromorpha. Within Demospongiae and Hexactinellida, sponges’ skeletons are needle-like spicules made of silica. With a wide variety of shapes and sizes, these siliceous spicules’ morphology plays a pivotal role in assessing and understanding sponges' taxonomic diversity and evolution. In marine ecosystems, when sponges die their bodies disintegrate over time, but their spicules remain in the sediments as fossilized records that bear ample taxonomic information to reconstruct the evolution of sponge communities and sponge phylogeny.

Traditional methods of identifying spicules from …

Hidden Markov Models With Momentum, Andrew Miller

Master's Projects

Momentum is a popular technique for improving convergence rates during gradient descent. In this research, we experiment with adding momentum to the Baum-Welch expectation-maximization algorithm for training Hidden Markov Models. We compare discrete Hidden Markov Models trained with and without momentum on English text and malware opcode data. The effectiveness of momentum is determined by measuring the changes in model score and classification accuracy due to momentum. Experiments indicate that adding momentum to Baum-Welch can reduce the number of iterations required for initial convergence during HMM training, particularly in cases where the model is slow to converge. However, momentum does …

Darknet Traffic Classification, Nhien Rust-Nguyen

Master's Projects

The anonymous nature of darknets is commonly exploited for illegal activities. Previous research has employed machine learning and deep learning techniques to automate the detection of darknet traffic to block these criminal activities. This research aims to improve darknet traffic detection by assessing Support Vector Machines (SVM), Random Forest (RF), Convolutional Neural Networks (CNN) and Auxiliary-Classifier Generative Adversarial Networks (AC-GAN) for classification of network traffic and the underlying application types. We find that our RF model outperforms the state-of-the-art machine learning techniques used by prior work with the CIC-Darknet2020 dataset. To evaluate the robustness of our RF classifier, we degrade …

Improving User Experiences For Wiki Systems, Parth Patel

Master's Projects

Wiki systems are web applications that allow users to collaboratively manage the content. Such systems enable users to read and write information in the form of web pages and share media items like videos, audios, books etc. Yioop is an open-source web portal with features of a search engine, a wiki system and discussion groups. In this project I have enhanced Yioop’s features for improving the user experiences. The preliminary work introduced new features like emoji picker tool for direct messaging system, unit testing framework for automating the UI testing of Yioop and redeeming advertisement credits back into real money. …

Determining Power System Fault Location Using Neural Network Approach, Edward O. Ojini

Theses and Dissertations--Electrical and Computer Engineering

Fault location remains an extremely pivotal feature of the electric power grid as it ensures efficient operation of the grid and prevents large downtimes during fault occurrences. This will ultimately enhance and increase the reliability of the system. Since the invention of the electric grid, many approaches to fault location have been studied and documented. These approaches are still effective and are implemented in present times, and as the power grid becomes even more broadened with new forms of energy generation, transmission, and distribution technologies, continued study on these methods is necessary. This thesis will focus on adopting the artificial …

Learn Programming In Virtual Reality? A Project For Computer Science Students, Benjamin Alexander

Electronic Theses, Projects, and Dissertations

This paper presents the development of a new learning platform in Virtual Reality to create a more immersive and intuitive learning experience for introduction of programming courses at an intermediate level. This platform is designed to create a central hub for interactive courseware and facilitate distance learning in our post COVID world. Utilizing Virtual Reality, the application teaches specific topics in Computer Science using scripted animations, tutorials, and interactive games. A pilot study was conducted to evaluate the user experience and learning outcomes. Participants of this study reported they were more engaged and motivated in learning programing concepts. We found …