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University of Nebraska - Lincoln

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Full-Text Articles in Computer Sciences

Radar Precursors To Severe Weather Reports In Left-Moving Supercells, Eric A. Carothers May 2025

Radar Precursors To Severe Weather Reports In Left-Moving Supercells, Eric A. Carothers

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

While much research has examined dual-polarimetric signatures of right-moving supercells, very little has been done with left-moving supercells. Given that left-moving supercells are thought to be disproportionate producers of large hail, understanding their internal dynamics is vitally important. This study examines differences and trends in the dual-polarimetric signatures of left-moving supercells to identify precursors to severe weather reports. A dataset of left-moving supercells associated with severe weather reports was created. These storms are processed with an automated analysis algorithm that identifies and quantifies the polarimetric signatures in each storm. A method for analysis of differences and trends in their dual-polarization …


Understanding Automation From A Computer Science Perspective, Matthew Donsig May 2025

Understanding Automation From A Computer Science Perspective, Matthew Donsig

Honors Program: Senior Projects (Public)

This thesis looks into automation and analyzes its benefits and problems. It begins with an explanation of a capstone project, automating the UNL State Museum’s reservation system. Problems of automation are presented in unsuccessful attempts and some pitfalls of automation. Next this thesis turns to an examination of artificial intelligence in automation. Along with that, we look at bias in automation and how people can bias automated tools or be biased by them. Turning successful examples of automation and then automation in manufacturing shows its benefits. Automation creates new jobs or changes work as much as it eliminates positions. At …


Towards Advancing Streamflow And Peak Flow Prediction With Machine Learning: Identifying Infrastructure At Risk, Sudan Pokharel May 2025

Towards Advancing Streamflow And Peak Flow Prediction With Machine Learning: Identifying Infrastructure At Risk, Sudan Pokharel

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Due to climate change and its impact, the need for adaptive strategies for natural disaster mitigation and resource management has never been more urgent. Central to this is water resource management, which is essential for sustainable human activities, ecological balance, and the mitigation of natural hazards like floods. Streamflow is a crucial element of water resource management and plays a vital role in planning and building water infrastructure, implementing emergency response plans, supporting flood mitigation initiatives, and regulating agricultural and industrial use. However, accurate prediction of streamflow still remains a challenge due to the complex non-linear and non-stationary interaction between …


Robot-Integrated 4d Building Information Modeling (4d Bim): Framework For Planning Safe Autonomous Construction Operations In Dynamic Environments, Hafiz Oyedimeji Oyediran May 2025

Robot-Integrated 4d Building Information Modeling (4d Bim): Framework For Planning Safe Autonomous Construction Operations In Dynamic Environments, Hafiz Oyedimeji Oyediran

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

In the construction industry, the use of autonomous robots is considered a solution to overcome the heavy reliance on human workers to perform repetitive, strenuous, and hazardous tasks. While these robots offer the advantage of autonomous operation, ensuring their safe and efficient integration within construction sites requires precise planning. Such planning must account for the varying project complexities such as scope, site layout, tasks, timelines, existence of human workers, and other spatiotemporal conditions of the construction site. Currently, there are no methods to safely plan autonomous robot operations considering these factors within the overarching construction planning process. Thus, autonomous robots …


Algorithms For Order Statistics In Farey Sequences: A Computational Study, Connor Weyers Apr 2025

Algorithms For Order Statistics In Farey Sequences: A Computational Study, Connor Weyers

School of Computing: Dissertations, Theses, and Student Research

Farey sequences are the sets of irreducible fractions in increasing order with denominator less or equal to some integer n. They are a well-known concept in number theory problems and are related to many other concepts in number theory including integer factoring, Fibonacci sequences, and Riemann’s Zeta function. In this paper, we investigate some known algorithms to solve certain problems in Farey sequences from a computational perspective. In particular, we implement established algorithms that have not been previously implemented with the goal of creating a package that can be used more broadly. We also develop a new algorithm for rational …


Enhancing Remote Sensing Imagery Temporal Resolution Using Starfm Data Fusion Approach For Improved Land Surface Monitoring, Ahmadreza Pourghodrat Apr 2025

Enhancing Remote Sensing Imagery Temporal Resolution Using Starfm Data Fusion Approach For Improved Land Surface Monitoring, Ahmadreza Pourghodrat

School of Computing: Dissertations, Theses, and Student Research

High-resolution remote sensing imagery plays a critical role in various domains, such as farm-level agricultural operations, environmental monitoring, and natural resource management. However, data with high spatial resolution typically have low temporal resolution, and those with high temporal resolution often lack spatial detail. For example, Landsat 8 and 9 satellites deliver high spatial resolution images with a 30-meter pixel size but suffer from low temporal resolution, with a 16-day revisit cycle. In contrast, satellites like MODIS and VIIRS provide daily images but with a much coarser spatial resolution (375 meters or more), reducing spatial details. Additionally, there is a lack …


Navigating Generative Ai In Honors, Anne Dotter, Victoria M. Bryan Apr 2025

Navigating Generative Ai In Honors, Anne Dotter, Victoria M. Bryan

Journal of the National Collegiate Honors Council Online Archive

Considering the historical significance and pedagogical impact of educational technologies on teaching and learning in higher education, authors suggest that generative artificial intelligence creates more questions than solutions for honors practitioners. What might meaningful AI literacy look like throughout a multidisciplinary honors curriculum? To what extent will generative AI level educational inequities, or create new ones? If policing AI misuse is ultimately a losing battle, how might this understanding reshape assignment design, assessment practices, and even our definitions of academic dishonesty? Drawing on examples in current teaching practice, authors observe the two sides of generative AI—one holding powerful possibilities for …


Editor's Introduction, Amy Mecklenburg-Faenger Apr 2025

Editor's Introduction, Amy Mecklenburg-Faenger

Journal of the National Collegiate Honors Council Online Archive

Editorial for Journal of the National Collegiate Honors Council (2025) 26(1), special issue on Forum on AI and Honors.


Ai Responsibilization: Shifting The Burden Of Academic Integrity, Daniel A. Cryer Apr 2025

Ai Responsibilization: Shifting The Burden Of Academic Integrity, Daniel A. Cryer

Journal of the National Collegiate Honors Council Online Archive

Because AI text generators like ChatGPT give students unprece-dented power to outsource their work, concerns about academic integrity are escalating among instructors. This essay suggests that the proliferation of generative artificial intelligence in teaching and learning dramatically shifts the burden of academic integrity, typically shared between teachers and students, onto students. The concept of responsibilization, a defining feature of neoliberal societies in which individuals become responsible for costs and tasks once shouldered collectively, is a useful lens through which to view this new reality. Rather than policing students’ work, educators should recognize the new responsibilities conferred onto students by learning …


Pull Up A Chair, Deep Blue: Ai In Honors Education, Betsy Greenleaf Yarrison Apr 2025

Pull Up A Chair, Deep Blue: Ai In Honors Education, Betsy Greenleaf Yarrison

Journal of the National Collegiate Honors Council Online Archive

Generative AI is the latest in a succession of technologies that allow us to do with machines what we used to have to do by hand. This essay argues that the elements of teaching in honors that can be automated probably should be and that it is the role of honors faculty to teach students how to distinguish superior thought from mediocre thought, good questions from great ones, and solid supporting evidence from weak or biased counterparts. Large learning models (LLMs) only collate what is already known and cannot teach thinking. As an information delivery system, AI can narrow the …


Teaching Ai Literacy Through Science Studies, Rhetoric, And Ethical Reasoning, Michael J. Klein, Philip L. Frana Apr 2025

Teaching Ai Literacy Through Science Studies, Rhetoric, And Ethical Reasoning, Michael J. Klein, Philip L. Frana

Journal of the National Collegiate Honors Council Online Archive

Building on the idea of productive troublemaking, this essay presents a team-taught interdisciplinary honors course that integrates science and technology studies, rhetorical analysis, ethical reasoning, and artificial intelligence policy. Rather than framing AI as a threat, this course invites honors students to experiment with AI technologies and develop competencies by analyzing AI as a social and subjectivity-shaping phenomenon—writing policy briefs, producing rhetorical analyses of science fiction, and completing self-paced AI literacy modules. Honors education is uniquely positioned to model responsible and human-centered uses of intelligent systems, thereby cultivating graduates who can both use and critically interrogate the AI tools that …


News From The Front: How To Win The Ai War, Christine Haverington Apr 2025

News From The Front: How To Win The Ai War, Christine Haverington

Journal of the National Collegiate Honors Council Online Archive

While artificial intelligence is currently and justifiably a hot topic among scholars and university administrators, students are way ahead of the curve in terms of its use and application. Calling for educators to stop trying to catch AI “cheaters,” this essay provides evidence from honors and other classroom observations, student research on peer and faculty usage and attitudes, course evaluations, and external sources to demonstrate how and why generative AI can be creatively and effectively incorporated into teaching. Toward this end, practical pedagogical strategies are shared describing teaching modalities and innovative curricular design, avoiding the cognitive degradation of students, and …


Another “Tone Test” Moment: Authenticity, Ai, And The Admission Essay, Peter Tschirhart Apr 2025

Another “Tone Test” Moment: Authenticity, Ai, And The Admission Essay, Peter Tschirhart

Journal of the National Collegiate Honors Council Online Archive

Debates about “authenticity” are not new but cyclical, and insights from music history and performance studies can illuminate how we evaluate student work in an age of machine collaboration. At the turn of the twentieth century, Edison’s “tone tests” blurred the line between human and machine by staging performances in which audiences were challenged to distinguish live singers from phonographic recordings. These events inaugurated a century-long debate about authenticity in music, one that resonates strongly today as educators confront new challenges posed by large language models (LLMs). Drawing on Auslander’s (2023) account of liveness, authenticity in writing—like authenticity in music—can …


Honoring Intellectual Risk-Taking: A Dialogue, Julie Bowman, Alexis Teagarden Apr 2025

Honoring Intellectual Risk-Taking: A Dialogue, Julie Bowman, Alexis Teagarden

Journal of the National Collegiate Honors Council Online Archive

Presented in the form of a Socratic dialogue, this piece considers what honors courses should strive to teach. Bowman, an experienced instructor of both non-honors and honors classes, notes that while universities’ honors colleges prize intellectual curiosity, her honors students might not. Teagarden, the other interlocutor and a writing program administrator, wonders whether curiosity is a sufficient end goal for honors or any teaching. The speakers turn to whether curiosity or courage is the more important virtue to instill, explore a classical difference between courage and audacity, and then discuss whether and how courage could be taught.


Generative Ai And The Honors Thesis: A Rhetorical Framework For Gai Policy, Pedagogy, And Equity, Sean Chadwick Apr 2025

Generative Ai And The Honors Thesis: A Rhetorical Framework For Gai Policy, Pedagogy, And Equity, Sean Chadwick

Journal of the National Collegiate Honors Council Online Archive

This article offers a rhetorical framework for understanding how honors students engage with the capstone thesis following the emergence of generative AI (GAI) tools. Author reviews the nature of the honors thesis and analyzes some rhetorical models for thinking about GAI and literacy before offering a heuristic framework identifying four interdependent skill categories—writing, social, executive, and subject matter—that shape students’ thesis work. Drawing on findings from an interview study, this framework clarifies how GAI tools interface with existing thesis practices and pain points, allowing honors practitioners to better articulate our values, evaluate use cases, and craft GAI-informed policy. As a …


Framework For Integrating Industry Knowledge Into A Large Language Model To Assist Construction Cost Estimation, Prashnna Ghimire Apr 2025

Framework For Integrating Industry Knowledge Into A Large Language Model To Assist Construction Cost Estimation, Prashnna Ghimire

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The construction industry generates a large amount of data across projects produced by digital devices, tools, and methods, and this volume is rapidly increasing. However, the industry lags behind in adopting data-driven technologies. On the other hand, the rapid advancement of generative AI (GenAI) in recent years, especially state-of-the-art large language models (LLMs), shows great potential and has been increasingly adopted in many industries; however, the construction industry is behind in adoption. While academic studies have proposed various machine learning applications for construction, industry implementation has lagged due to a disconnect between these proof-of-concept developments and practical industry needs. Also, …


Future Of Bse Days 2025: Growing A Regenerative Bse, Derek M. Heeren, Santosh Pitla, Jennifer R. Keshwani, Mark Stone Jan 2025

Future Of Bse Days 2025: Growing A Regenerative Bse, Derek M. Heeren, Santosh Pitla, Jennifer R. Keshwani, Mark Stone

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

The Future of BSE Days 2025: Growing a Regenerative BSE brought together over 150 faculty, staff, students, and partners to envision the next quarter-century of the Department of Biological Systems Engineering. The event emphasized regeneration—not only of resources and ecosystems, but also of ideas, learning models, and relationships. Across seven major sessions—three Spark Talks and four Pillar Workshops—participants explored how BSE can thrive amid technological disruption, demographic change, and societal transformation.

Key Outcomes

Redefining Impact: This session challenged participants to evolve from counting outputs to valuing relationships, collaboration, and community well-being.

Adaptive Learning Models: This discussion introduced design studios, micro-credentials, …


Leaf-Based Varietal Categorization Of Sweetpotato (Ipomoea Batatas L. Lam.), A Potentially Healthful Vegetable, Using Image Processing And K-Means Clustering, Shahidul Islam, Md Towfiqur Rahman, Md Hamidul Rahman, Abdul Momin Jan 2025

Leaf-Based Varietal Categorization Of Sweetpotato (Ipomoea Batatas L. Lam.), A Potentially Healthful Vegetable, Using Image Processing And K-Means Clustering, Shahidul Islam, Md Towfiqur Rahman, Md Hamidul Rahman, Abdul Momin

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Sweetpotato (Ipomoea batatas Lam) leaves contain higher concentrations of phenolic compounds, flavonoids, and carotenoids that are remarkable in health promotion. However, the nutrient content in sweetpotato leaves varies from variety to variety, and leaf shape and color are the key identifying factors for the varietal classification of sweetpotatoes. So, detecting sweetpotato leaves is essential for the in-situ identification of sweetpotato varieties and for developing intelligent agricultural systems. This study aimed to create a leaf-shape-based varietal classification technique for sweetpotato using image processing techniques coupled with a K-means clustering algorithm. 38 leaf images (RGB) of two sweetpotato cultivars were collected …


In-Season Nitrogen Mmanagement: Leveraging Data Visualization For Precision Agriculture, Chathurika Harshani Narayana Jan 2025

In-Season Nitrogen Mmanagement: Leveraging Data Visualization For Precision Agriculture, Chathurika Harshani Narayana

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Effective nitrogen management is vital for sustainable agriculture, impacting both crop yield and environmental health. Traditional methods often use fixed application rates set before planting, which do not adapt to changing crop needs during the season. This can lead to over- or under-application, reducing efficiency and sustainability. While modern tools like sensors, satellites, and UAVs provide valuable real-time data on crop and field conditions, integrating and using this data to guide timely nitrogen decisions remains a major challenge. In-season nitrogen management offers a solution by allowing for dynamic adjustments to nitrogen applications, addressing crop needs as they arise. This approach …


Copyright And Artificial Intelligence, Part 2: Copyrightability Jan 2025

Copyright And Artificial Intelligence, Part 2: Copyrightability

Copyright, Fair Use, Scholarly Communication, etc.

This report by the United States Copyright Office addresses the legal and policy issues related to artificial intelligence (AI) and copyright as outlined in the Office’s August 2023 Notice of Inquiry (NOI).

The report will be published in several parts each one addressing a different topic. This part addresses the copyrightability of works created using generative AI. The first part, published in 2024, addresses the topic of digital replicas—the use of digital technology to realistically replicate an individual’s voice or appearance. A subsequent part will turn to the training of AI models on copyrighted works, licensing considerations, and allocation of …


Using Symbolic Execution To Analyze The Hardware Tcp Protocol, Nianhang Hu Dec 2024

Using Symbolic Execution To Analyze The Hardware Tcp Protocol, Nianhang Hu

School of Computing: Dissertations, Theses, and Student Research

As the demand for high performance and flexible networking capabilities increases, the shift from software to hardware implementations of stateful networking functions (such as TCP) is becoming increasingly important. This transition not only enhances processing efficiency in modern networking environments where data transmission rates are rising, but it also reduces the inherent CPU overhead found in software implementations, allowing hardware devices to handle network traffic more efficiently. However, validating the correctness of these hardware designs poses significant challenges due to the complex timing requirements and the vast input space associated with packet-level properties.

The verification of packet-level properties requires coverage …


Not All Samples Are Created Equal: Task-Aware Informative Sampling And Adaptive Inference For Efficient Edge Ai, Rebati Gaire Dec 2024

Not All Samples Are Created Equal: Task-Aware Informative Sampling And Adaptive Inference For Efficient Edge Ai, Rebati Gaire

School of Computing: Dissertations, Theses, and Student Research

The rapid proliferation of Internet of Things (IoT) devices has resulted in an unprecedented influx of data generated at the edge by billions of sensors. Traditional approaches relying on cloud-based processing are increasingly inadequate due to constraints in bandwidth, latency, and privacy. Edge computing has emerged as a transformative paradigm, enabling real-time data processing and decision-making by decentralizing computation to the edge. While the integration of deep learning into edge environments—termed edge intelligence—promises autonomous and personalized operations, it is hindered by challenges such as limited computational resources, energy constraints, and data redundancies.

This thesis addresses these challenges by presenting three …


Prevalence Of Autism Spectrum Characteristics In Students Taking Undergraduate Computing Courses, Rachel Michaela Mettenbrink Dec 2024

Prevalence Of Autism Spectrum Characteristics In Students Taking Undergraduate Computing Courses, Rachel Michaela Mettenbrink

School of Computing: Dissertations, Theses, and Student Research

The incidence rate of autism spectrum condition (ASC) has increased significantly in recent decades, as awareness of the condition and its impacts increases amongst clinicians, parents, and the general population. Medical literature has proposed that there may be a relationship between ASC and participation in the computing field. This study tests for the prevalence of autism spectrum condition traits measured by delivering the Autism Spectrum Quotient (AQ) to a population of undergraduate computer science students. We examine the relationships between AQ scores and students taking undergraduate computer science classes, sex, socioeconomic status, and parents in the computing industry. Additionally, we …


Controller Software: Evolution, Identification, And Implementation, Balaji Balasubramaniam Dec 2024

Controller Software: Evolution, Identification, And Implementation, Balaji Balasubramaniam

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

In the annals of automation history and advancement, one can find control technology is at the core. Modern-day controllers rely heavily on software capability to provide stability and improve the system's performance. In particular, drone flight controllers use autopilot control software to accomplish autonomous navigation from take-off to landing. However, we know very little about how the controller code modifications and its impact, particularly at the software level. No general framework has been developed to identify the control code changes and observe the real values of software control loops at the kernel layer.

In this thesis, we lay the foundation …


Deep Learning Vision-Based Bridge Inspection With Resource-Constrained Unmanned Aircraft Systems, Ji Young Lee Dec 2024

Deep Learning Vision-Based Bridge Inspection With Resource-Constrained Unmanned Aircraft Systems, Ji Young Lee

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Bridge inspection is critical for ensuring structural integrity, extending the service life of infrastructure, and minimizing maintenance costs. As bridges age and endure increasing loads, regular inspections help detect early signs of wear, such as cracks or corrosion, that could impact safety and performance. However, traditional inspection methods are labor-intensive, requiring significant time, specialized equipment, and manual access to challenging areas, which can lead to costly disruptions. Additionally, reliance on human inspectors introduces subjectivity, with assessments varying by individual expertise. These factors highlight the inefficiencies and safety risks in current inspection practices, underscoring the need for more objective, efficient solutions. …


Domain-Specific Machine Learning Approaches For Geospatial Problems, Shine Bedi Dec 2024

Domain-Specific Machine Learning Approaches For Geospatial Problems, Shine Bedi

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation explores novel algorithms for complex geospatial problems at the intersection of environmental, social, and computational sciences. Emphasizing the unique challenges of the geospatial domain, particularly the deviation from the independent and identical distribution (IID) assumption, the research spans various methodologies across different domains, demonstrating the benefits of specialized approaches in spatial analysis.

First, we show that machine learning techniques can be effectively used in environmental modeling, which often has severe class imbalance challenges. Using artificial neural networks (ANN), support vector machines (SVM), and extreme gradient boosting (XGB) and techniques to address class imbalance provides insights into groundwater quality …


Mining Work Items To Streamline Software Maintenance Tasks, Salomé Perez-Rosero Dec 2024

Mining Work Items To Streamline Software Maintenance Tasks, Salomé Perez-Rosero

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Software engineering maintenance tasks often require associating code changes into groupings of related units of work to have as much information as possible about the developments toward addressing a specific code task. A comprehensive understanding of how a code task has evolved helps developers make better decisions about changes in the overall codebase, where a commit represents the set of code changes made to the codebase at a specific time. While the concept of work items as logically related code changes has been primarily theoretical, its impact on software maintenance tasks, such as tracing the origins of bugs or fixes …


Performance Of Acoustic Telemetry And Space Use Of Pallid Sturgeon In The Lower Platte River, Nebraska, Christopher F. Pullano Dec 2024

Performance Of Acoustic Telemetry And Space Use Of Pallid Sturgeon In The Lower Platte River, Nebraska, Christopher F. Pullano

School of Natural Resources: Dissertations, Theses, and Student Research

Pallid Sturgeon (Scaphirhynchus albus) are centenarian, potamodromous, rheophiles that historically occupied the Missouri River and Mississippi River basins. Listed on the U.S. Endangered Species Act in 1990, population declines are attributed to habitat fragmentation and degradation, as well as overharvest, and hybridization. A knowledge gap exists regarding the extent to which tributaries facilitate key life stages for Pallid Sturgeon. This study evaluated the capacity of acoustic telemetry to monitor the movements of Pallid Sturgeon in a shallow, braided tributary to the Missouri River. The specific objectives were to (1) evaluate the environmental variables influencing the performance of acoustic …


Institutional Data Repositories Are Vital, Jen Darragh, Mikala R. Narlock, Halle Burns, Peter A. Cerda, Wind Cowles, Leslie M. Delserone, Seth Erickson, Joel Herndon, Heidi Imker, Lisa R. Johnston, Sherry Lake, Michael Lenard, Alicia Hofelich Mohr, Jennifer Moore, Jonathan Petters, Brandie Pullen, Shawna Taylor, Briana Wham Sep 2024

Institutional Data Repositories Are Vital, Jen Darragh, Mikala R. Narlock, Halle Burns, Peter A. Cerda, Wind Cowles, Leslie M. Delserone, Seth Erickson, Joel Herndon, Heidi Imker, Lisa R. Johnston, Sherry Lake, Michael Lenard, Alicia Hofelich Mohr, Jennifer Moore, Jonathan Petters, Brandie Pullen, Shawna Taylor, Briana Wham

University of Nebraska-Lincoln Libraries: Faculty Publications

As funding agencies and publishers reiterate research data sharing expectations (1), many higher-education institutions have demonstrated their commitment to the long-term stewardship of research data by connecting researchers to local infrastructure, with dedicated staffing, that eases the burden of data sharing. Institutional repositories are an example of this investment (2). They provide support for researchers in sharing data that might otherwise be lost: data without a disciplinary repository, data from projects with limited funding, or data that are too large to sustainably store elsewhere. The staffing and technical infrastructure provided by institutional repositories ensures responsible access to information while considering …


Dirt/Μ: Automated Extraction Of Root Hair Traits Using Combinatorial Optimization, Peter Pietrzyk, Neen Phan-Udom, Chartinun Chutoe, Lise Pingault, Ankita Roy, Marc Libault, Patompong Johns Saengwilai, Alexander Bucksch Sep 2024

Dirt/Μ: Automated Extraction Of Root Hair Traits Using Combinatorial Optimization, Peter Pietrzyk, Neen Phan-Udom, Chartinun Chutoe, Lise Pingault, Ankita Roy, Marc Libault, Patompong Johns Saengwilai, Alexander Bucksch

Department of Entomology: Faculty Publications

As with phenotyping of any microscopic appendages, such as cilia or antennae, phenotyping of root hairs has been a challenge due to their complex intersecting arrangements in two-dimensional images and the technical limitations of automated measurements. Digital Imaging of Root Traits at Microscale (DIRT/μ) is a newly developed algorithm that addresses this issue by computationally resolving intersections and extracting individual root hairs from two-dimensional microscopy images. This solution enables automatic and precise trait measurements of individual root hairs. DIRT/μ rigorously defines a set of rules to resolve intersecting root hairs and minimizes a newly designed cost function to combinatorically identify …