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Articles 61 - 90 of 490
Full-Text Articles in Computer Sciences
Machine Learning Algorithms For Molecular Signature Identification With High-Throughput Genome Sequencing Data, Jiao Sun
Electronic Theses and Dissertations, 2020-2023
Powered by the high-throughput genomic technologies, the RNA sequencing (RNA-Seq) method is capable of measuring transcriptome-wide mRNA expressions and molecular activities in cells. Elucidation of gene expressions at the isoform resolution enables the detection of better molecular signatures for phenotype prediction, and the identified biomarkers may provide insights into the functional consequences of disease. This dissertation research focuses on developing advanced machine learning algorithms for mining large-scale RNA-Seq data in cancer transcriptome analysis. A platform-integrated model for transcript quantification (IntMTQ) is developed to improve the performance of RNA-Seq on isoform expression estimation. IntMTQ provides more precise RNA-Seq-based isoform quantification, and …
Algorithms And Variations On The Positional Burrows-Wheeler Transform And Their Applications, Ahsan Sanaullah
Algorithms And Variations On The Positional Burrows-Wheeler Transform And Their Applications, Ahsan Sanaullah
Electronic Theses and Dissertations, 2020-2023
In this dissertation, we develop algorithms and variations on the Positional Burrows-Wheeler Transform (PBWT). The PBWT is a data structure that stores M binary strings of length N while allowing efficient search. We develop the dynamic-PBWT (d-PBWT). The d-PBWT is a variation of the PBWT that allows its relevant algorithms to run with unchanged time complexity, but also allows efficient insertion and deletion of haplotypes. We provide insertion and deletion algorithms on the PBWT with average case O(N) time complexity. We also improve upon the query algorithms for the PBWT. Durbin described a set maximal match query algorithm on the …
Reconstructing 3d Humans From Visual Data, Ce Zheng
Reconstructing 3d Humans From Visual Data, Ce Zheng
Graduate Thesis and Dissertation 2023-2024
Understanding humans in visual content is fundamental for numerous computer vision applications. Extensive research has been conducted in the field of human pose estimation (HPE) to accurately locate joints and construct body representations from images and videos. Expanding on HPE, human mesh recovery (HMR) addresses the more complex task of estimating the 3D pose and shape of the entire human body. HPE and HMR have gained significant attention due to their applications in areas such as digital human avatar modeling, AI coaching, and virtual reality [135]. However, HPE and HMR come with notable challenges, including intricate body articulation, occlusion, depth …
Deep Learning Approaches For Automatic Colorization, Super-Resolution, And Representation Of Volumetric Data, Sudarshan Devkota
Deep Learning Approaches For Automatic Colorization, Super-Resolution, And Representation Of Volumetric Data, Sudarshan Devkota
Graduate Thesis and Dissertation 2023-2024
This dissertation includes a collection of studies that aim to improve the way we represent and visualize volume data. The advancement of medical imaging has revolutionized healthcare, providing crucial anatomical insights for accurate diagnosis and treatment planning. Our first study introduces an innovative technique to enhance the utility of medical images, transitioning from monochromatic scans to vivid 3D representations. It presents a framework for reference-based automatic color transfer, establishing deep semantic correspondences between a colored reference image and grayscale medical scans. This methodology extends to volumetric rendering, eliminating the need for manual intervention in parameter tuning. Next, it delves into …
Low-Resource Machine Learning Techniques For The Analysis Of Online Social Media Textual Data, Toktam Amanzadeh Oghaz
Low-Resource Machine Learning Techniques For The Analysis Of Online Social Media Textual Data, Toktam Amanzadeh Oghaz
Electronic Theses and Dissertations, 2020-2023
Low-resource and label-efficient machine learning methods can be described as the family of statistical and machine learning techniques that can achieve high performance without needing a substantial amount of labeled data. These methods include both unsupervised learning techniques, such as LDA, and supervised methods, such as active learning, each providing different benefits. Thus, this dissertation is devoted to the design and analysis of unsupervised and supervised techniques to provide solutions for the following problems: Unsupervised narrative summary extraction for social media content, Social media text classification with Active Learning (AL), Investigating restrictions and benefits of using Curriculum Learning (CL) for …
Advanced Deep Learning Methodologies For Deepfake Detection, Aminollah Khormali
Advanced Deep Learning Methodologies For Deepfake Detection, Aminollah Khormali
Electronic Theses and Dissertations, 2020-2023
The recent advances in the field of Artificial Intelligence (AI), particularly Generative Adversarial Networks (GANs) and an abundance of training samples along with robust computational resources have significantly propelled the field of AI-generated fake information in all kinds, e.g., deepfakes. Deepfakes are among the most sinister types of misinformation, posing large-scale and severe security and privacy risks targeting critical governmental institutions and ordinary people across the world. The fact that deepfakes are AI-generated digital content and not actual events captured by a camera implies that they still can be detected using advanced AI models. Although the deepfake detection task has …
Torward Real-World Cross-View Image Geo-Localization, Sijie Zhu
Torward Real-World Cross-View Image Geo-Localization, Sijie Zhu
Electronic Theses and Dissertations, 2020-2023
Cross-view image geo-localization aims to determine the locations of street-view query images by searching in a GPS-tagged reference image database from aerial view. One fundamental challenge is the dramatic view-point/domain difference between the street-view query images and aerial-view reference images. Recent works have made great progress on bridging the domain gap with advanced deep learning techniques and geometric prior knowledge, i.e. the query is aligned at the center of one aerial-view reference image (spatial alignment) and the orientation relationship between the two views is known (orientation alignment). However, such prior knowledge of the geometry correspondence of the two views is …
Human-Machine Communication: Complete Volume 4
Human-Machine Communication: Complete Volume 4
Human-Machine Communication
This is the complete volume of HMC Volume 4.
Embracing Ai-Based Education: Perceived Social Presence Of Human Teachers And Expectations About Machine Teachers In Online Education, Jihyun Kim, Kelly Merrill Jr., Kun Xu, Deanna D. Sellnow
Embracing Ai-Based Education: Perceived Social Presence Of Human Teachers And Expectations About Machine Teachers In Online Education, Jihyun Kim, Kelly Merrill Jr., Kun Xu, Deanna D. Sellnow
Human-Machine Communication
Technological advancements in education have turned the idea of machines as teachers into a reality. To better understand this phenomenon, the present study explores how college students develop expectations (or anticipations) about a machine teacher, particularly an AI teaching assistant. Specifically, the study examines whether students’ previous experiences with online courses taught by a human teacher would influence their expectations about AI teaching assistants in future online courses. An online survey was conducted to collect data from college students in the United States. Findings indicate that positively experienced social presence of a human teacher helps develop positive expectations about an …
Sex With Robots And Human-Machine Sexualities: Encounters Between Human-Machine Communication And Sexuality Studies, Marco Dehnert
Sex With Robots And Human-Machine Sexualities: Encounters Between Human-Machine Communication And Sexuality Studies, Marco Dehnert
Human-Machine Communication
Sex robots are a controversial topic. Understood as artificial-intelligence enhanced humanoid robots designed for use in partnered and solo sex, sex robots offer ample opportunities for theorizing from a Human-Machine Communication (HMC) perspective. This comparative literature review conjoins the seemingly disconnected literatures of HMC and sexuality studies (SeS) to explore questions surrounding intimacy, love, desire, sex, and sexuality among humans and machines. In particular, I argue for understanding human-machine sexualities as communicative sexuotechnical-assemblages, extending previous efforts in both HMC and SeS for more-than-human, ecological, and more fluid approaches to humans and machines, as well as to sex and sexuality. This …
I Get By With A Little Help From My Bots: Implications Of Machine Agents In The Context Of Social Support, Austin Beattie, Andrew C. High
I Get By With A Little Help From My Bots: Implications Of Machine Agents In The Context Of Social Support, Austin Beattie, Andrew C. High
Human-Machine Communication
In this manuscript we discuss the increasing use of machine agents as potential sources of support for humans. Continued examination of the use of machine agents, particularly chatbots (or “bots”) for support is crucial as more supportive interactions occur with these technologies. Building off extant research on supportive communication, this manuscript reviews research that has implications for bots as support providers. At the culmination of the literature review, several propositions regarding how factors of technological efficacy, problem severity, perceived stigma, and humanness affect the process of support are proposed. By reviewing relevant studies, we integrate research on human-machine and supportive …
Human, Hybrid, Or Machine? Exploring The Trustworthiness Of Voice-Based Assistants, Lisa Weidmüller
Human, Hybrid, Or Machine? Exploring The Trustworthiness Of Voice-Based Assistants, Lisa Weidmüller
Human-Machine Communication
This study investigates how people assess the trustworthiness of perceptually hybrid communicative technologies such as voice-based assistants (VBAs). VBAs are often perceived as hybrids between human and machine, which challenges previously distinct definitions of human and machine trustworthiness. Thus, this study explores how the two trustworthiness models can be combined in a hybrid trustworthiness model, which model (human, hybrid, or machine) is most applicable to examine VBA trustworthiness, and whether this differs between respondents with different levels of prior experience with VBAs. Results from two surveys revealed that, overall, the human model exhibited the best model fit; however, the hybrid …
Considering The Context To Build Theory In Hci, Hri, And Hmc: Explicating Differences In Processes Of Communication And Socialization With Social Technologies, Andrew Gambino, Bingjie Liu
Considering The Context To Build Theory In Hci, Hri, And Hmc: Explicating Differences In Processes Of Communication And Socialization With Social Technologies, Andrew Gambino, Bingjie Liu
Human-Machine Communication
The proliferation and integration of social technologies has occurred quickly, and the specific technologies with which we engage are ever-changing. The dynamic nature of the development and use of social technologies is often acknowledged by researchers as a limitation. In this manuscript, however, we present a discussion on the implications of our modern technological context by focusing on processes of socialization and communication that are fundamentally different from their interpersonal corollary. These are presented and discussed with the goal of providing theoretical building blocks toward a more robust understanding of phenomena of human-computer interaction, human-robot interaction, human-machine communication, and interpersonal …
The Symptom Of Ethics: Rethinking Ethics In The Face Of The Machine, David J. Gunkel
The Symptom Of Ethics: Rethinking Ethics In The Face Of The Machine, David J. Gunkel
Human-Machine Communication
This essay argues that it is the machine that constitutes the symptom of ethics— “symptom” understood as that excluded “part that has no part” in the system of moral consideration. Ethics, which has been historically organized around a human or at least biological subject, needs the machine to define the proper limits of the moral community even if it simultaneously excludes such mechanisms from any serious claim on moral consideration. The argument will proceed in five steps or movements. The first part will define and characterize “the symptom” as it has been operationalized in the work of Slovenian philosopher Slavoj …
Comparative Evaluation Of Assemblers For Metagenomic Data Analysis, Matheus Pavini Franco Ferreira
Comparative Evaluation Of Assemblers For Metagenomic Data Analysis, Matheus Pavini Franco Ferreira
Honors Undergraduate Theses
Metagenomics is a cultivation-independent approach for obtaining the genomic composition of microbial communities. Microbial communities are ubiquitous in nature. Microbes which are associated with the human body play important roles in human health and disease. These roles span from protecting us against infections from other bacteria, to being the causes of these diseases. A deeper understanding of these communities and how they function inside our bodies allows for advancements in treatments and preventions for these diseases. Recent developments in metagenomics have been driven by the emergence of Next-Generation Sequencing technologies and Third-Generation Sequencing technologies that have enabled cost-effective DNA sequencing …
Identifying Challenges And Opportunities For Designing Social Media Nudges For Adolescents, Oluwatomisin Obajemu
Identifying Challenges And Opportunities For Designing Social Media Nudges For Adolescents, Oluwatomisin Obajemu
Electronic Theses and Dissertations, 2020-2023
With the prevalence of online risks encountered by youth online, strength-based approaches such as nudges have been recommended as a potential solution to subtly guide teens toward safer decisions. However, most nudging interventions to date have not been designed to cater to teens’ unique needs and online safety concerns. To address this gap, this study aimed to better understand adolescents’ perceptions and feedback on online safety nudges to inform the design of more effective online safety interventions. We conducted 12 semi-structured interviews and 3 focus group sessions with 21 teens (13 – 17 years old) to get their feedback on …
Authoring Tools For Augmented Reality Scenario Based Training Experiences, Andres Vargas Gonzalez
Authoring Tools For Augmented Reality Scenario Based Training Experiences, Andres Vargas Gonzalez
Electronic Theses and Dissertations, 2020-2023
Augmented Reality's (AR) scope and capabilities have grown considerably in the last few years. AR applications can be run across devices such as phones, wearables, and head-mounted displays (HMDs). The increasing research and commercial efforts in HMDs capabilities allow end users to map a 3D environment and interact with virtual objects that can respond to the physical aspects of the scene. Within this context, AR is an ideal format for in-situ training scenarios. However, building such AR scenarios requires proficiency in game engine development environments and programming expertise. These difficulties can make it challenging for domain experts to create training …
Towards More Efficient Collaborative Distributed Data Analysis And Learning, Zixia Liu
Towards More Efficient Collaborative Distributed Data Analysis And Learning, Zixia Liu
Electronic Theses and Dissertations, 2020-2023
Modern information era gives rise to the persistent generation of large amounts of data with rapid speed and broad geographical distribution. Obtaining knowledge and understanding via analysis and learning from such data have invaluable worth. Features of such data analytical tasks commonly include: data can be large scale and geographically distributed; computing capability demand can be enormous; tasks can be time-critical; some data can be private; participants can have heterogeneous capabilities and non-IID data; and multiple simultaneously submitted data analytical tasks can be possible. These bring challenges to contemporary computing infrastructure and learning models. In view of this, we develop …
Methodology Of Augmented Reality Chinese Language Articulatory Pronunciation Practice: Game And Study Design, Daria Sinyagovskaya
Methodology Of Augmented Reality Chinese Language Articulatory Pronunciation Practice: Game And Study Design, Daria Sinyagovskaya
Electronic Theses and Dissertations, 2020-2023
Learning a language can be hard. Learning a language that contains tones to convey meaning is even harder. This dissertation presents a novel methodology for creating a language practice using augmented reality that has never been used before. The design of a new app in AR and non-AR versions can evaluate the same practice methodology. This methodology was applied to new software and was examined in regard to the importance of this software. Although the study results are inconclusive, progress has been made in answering research questions on the effectiveness of AR versus non-AR and the reliability of peer assessment. …
Leveraging Human-Centered Insights And Vision Transformers To Understand And Detect Online Risks In Teens' Private Social Media Conversations On Instagram, Joshua Gracie
Electronic Theses and Dissertations, 2020-2023
With the growing ubiquity of the internet and internet enabled devices, the issue of online risk and the need for safety measures against such risks has grown paramount. Many researchers have analyzed the scope and characteristics of online risk, especially with respect to demographics, yet few have studied the risky media itself. This work sets out to move the conversation from surveys and interviews to content analysis and automation through a comprehensive thematic analysis of online multi-media risks (images and videos) sent to and from teens in private messages on Instagram. These messages, along with demographic information such as age …
Multivariate Cognitive Walkthrough Of Qubitvr: An Educational Quantum Computing, Virtual Reality Application, Pauline Johnson
Multivariate Cognitive Walkthrough Of Qubitvr: An Educational Quantum Computing, Virtual Reality Application, Pauline Johnson
Electronic Theses and Dissertations, 2020-2023
Quantum computing is a promising field but understanding how it works can be challenging for a beginner. There are also not many educational resources to visualize and learn about quantum computing. To advance knowledge in this area, we have created QubitVR, which employs a Bloch sphere representation of a qubit, and supports trajectory visualizations and state equations in a virtual reality (VR) setting. We also conducted a multivariate cognitive walkthrough with subject matter experts (SMEs) on QubitVR to assess the effectiveness of trajectory visualizations and state equations in learning about quantum gates. The results were that trajectory visualizations aided users …
Quantum Graph Parameters, Parisa Darbari Kozekanan
Quantum Graph Parameters, Parisa Darbari Kozekanan
Electronic Theses and Dissertations, 2020-2023
This dissertation considers some of the advantages, and limits, of applying quantum computing to solve two important graph problems. The first is estimating a graph's quantum chromatic number. The quantum chromatic number is the minimum number of colors necessary in a two-player game where the players cannot communicate but share an entangled state and must convince a referee with probability one that they have a proper vertex coloring. We establish several spectral lower bounds for the quantum chromatic number. These lower bounds extend the well-known Hoffman lower bound for the classical chromatic number. The second is the Pattern Matching on …
Methods For Defending Neural Networks Against Adversarial Attacks, Sharvil Shah
Methods For Defending Neural Networks Against Adversarial Attacks, Sharvil Shah
Electronic Theses and Dissertations, 2020-2023
Convolutional Neural Networks (CNNs) have been at the frontier of the revolution within the field of computer vision. Since the advent of AlexNet in 2012, neural networks with CNN architectures have surpassed human-level capabilities for many cognitive tasks. As the neural networks are integrated in many safety critical applications such as autonomous vehicles, it is critical that they are robust and resilient to errors. Unfortunately, it has recently been observed that deep neural network models are susceptible to adversarial perturbations which are imperceptible to human vision. In this thesis, we propose a solution to defend neural networks against white box …
Algorithms For The Detection Of Resolved And Unresolved Targets In The Infrared Bands, Bruce Mcintosh
Algorithms For The Detection Of Resolved And Unresolved Targets In The Infrared Bands, Bruce Mcintosh
Electronic Theses and Dissertations, 2020-2023
This dissertation proposes algorithms for the detection of both resolved and unresolved targets in the infrared bands. Recent breakthroughs in deep learning have spurred major advancements in computer vision, but most of the attention and progress has been focused on RGB imagery from the visual band. The infrared bands such as Long Wave Infrared (LWIR), Medium Wave Infrared (MWIR), Short Wave Infrared (SWIR) and Near Infrared (NIR) each respond differently to physical phenomena, providing information that can be used to better understand the environment. The first task addressed is that of detecting vehicles in heavy clutter in MWIR imagery. A …
Load Forecasting And Synthetic Data Generation For Smart Home Energy Management System, Mina Razghandi
Load Forecasting And Synthetic Data Generation For Smart Home Energy Management System, Mina Razghandi
Electronic Theses and Dissertations, 2020-2023
A number of recent trends, such as the increased power consumption in developed and developing countries, the dangers associated with greenhouse gases, the potential shortages of fossil fuels, and the increasing availability of solar and wind energy act as motivating factors for the development of more intelligent and efficient systems both on the power provider as well as the consumer side. One of the most important prerequisites for making efficient energy management decisions is the ability to predict energy production and consumption patterns. While long-term forecasting of average consumption had been extensively used to direct investments in the energy grid, …
Visual Question Answering: Exploring Trade-Offs Between Task Accuracy And Explainability, Aisha Urooj
Visual Question Answering: Exploring Trade-Offs Between Task Accuracy And Explainability, Aisha Urooj
Electronic Theses and Dissertations, 2020-2023
Given visual input and a natural language question about it, the visual question answering (VQA) task is to answer the question correctly. To improve a system's reliability and trustworthiness, it is imperative that it links the text (question and answer) to specific visual regions. This dissertation first explores the VQA task in a multi-modal setting where questions are based on video as well as subtitles. An algorithm is introduced to process each modality and their features are fused to solve the task. Additionally, to understand the model's emphasis on visual data, this study collects a diagnostic set of questions which …
Computational Methods To Analyze Next-Generation Sequencing Data In Genomics And Metagenomics, Saidi Wang
Computational Methods To Analyze Next-Generation Sequencing Data In Genomics And Metagenomics, Saidi Wang
Electronic Theses and Dissertations, 2020-2023
This thesis focuses on two important computational problems in genomics and metagenomics with the public available next-generation sequencing data. One is about gene regulation, for which we explore how distal regulatory elements may interact with the proximal regulatory elements. The other is about metagenomics, in which we study how to reconstruct bacterial strain genomes from shotgun reads. Studying gene regulation, especially distal gene regulation, is important because regulatory elements, including those in distal regulatory regions, orchestrate when, where and how much a gene is activated under every experimental condition. Their dysfunction results in various types of diseases. Moreover, the current …
A Human-Centered Approach To Improving Adolescent Online Sexual Risk Detection Algorithms, Afsaneh Razi
A Human-Centered Approach To Improving Adolescent Online Sexual Risk Detection Algorithms, Afsaneh Razi
Electronic Theses and Dissertations, 2020-2023
Computational risk detection has the potential to protect especially vulnerable populations from online victimization. Conducting a comprehensive literature review on computational approaches for online sexual risk detection led to the identification that the majority of this work has focused on identifying sexual predators after-the-fact. Also, many studies rely on public datasets and third-party annotators to establish ground truth and train their algorithms, which do not accurately represent young social media users and their perspectives to prevent victimization. To address these gaps, this dissertation integrated human-centered approaches to both creating representative datasets and developing sexual risk detection machine learning models to …
Examining Cooperative System Responses Against Grid Integrity Attacks, Alexander D. Parady
Examining Cooperative System Responses Against Grid Integrity Attacks, Alexander D. Parady
Honors Undergraduate Theses
Smart grid technologies are integral to society’s transition to sustainable energy sources, but they do not come without a cost. As the energy sector shifts away from a century’s reliance on fossil fuels and centralized generation, technology that actively monitors and controls every aspect of the power infrastructure has been widely adopted, resulting in a plethora of new vulnerabilities that have already wreaked havoc on critical infrastructure. Integrity attacks that feedback false data through industrial control systems, which result in possible catastrophic overcorrections and ensuing failures, have plagued grid infrastructure over the past several years. This threat is now at …
Distance Perception Through Head-Mounted Displays, Sina Masnadi
Distance Perception Through Head-Mounted Displays, Sina Masnadi
Electronic Theses and Dissertations, 2020-2023
It has been shown in numerous research studies that people tend to underestimate distances while wearing head-mounted displays (HMDs). We investigated various possible factors affecting the perception of distance is HMDs through multiple studies. Many contributing factors has been identified by researchers in the past decades, however, further investigation is required to provide a better understanding of this problem. In order to find a baseline for distance underestimation, we performed a study to compare the distance perception in real world versus a fake headset versus a see-through HMD. Users underestimated distances while wearing the fake headset or the see-through HMD. …