Computer Sciences Commons^™

Mpvm: A Migration Transparent Version Of Pvm, Jeremy Casas, Dan Clark, Ravi Konuru, Steve Otto, Robert Prouty, Jonathan Walpole

Computer Science Faculty Publications and Presentations

Parallel Virtual Machine (PVM) is a widely-used software system that allows a heterogeneous set of parallel and serial UNIX-based computers to be programmed as a single message-passing parallel machine, In this paper, an extension to PVM to support dynamic process migration is presented. Support for migration is important in general-purpose workstation environments since it allows parallel computations to co-exist with other applications, using idle-cycles as they become available and off-loading from workstations when they are no longer free. A description and evaluation of the design and implementation of the prototype Migratable PVM system is presented together with some performance results.

Evolving Globally Synchronized Cellular Automata, Rajarshi Das, James P. Crutchfield, Melanie Mitchell, James M. Hanson

Computer Science Faculty Publications and Presentations

How does an evolutionary process interact with a decentralized, distributed system in order to produce globally coordinated behavior? Using a genetic algorithm (GA) to evolve cellular automata (CAs), we show that the evolution of spontaneous synchronization, one type of emergent coordination, takes advantage of the underlying medium's potential to form embedded particles. The particles, typically phase defects between synchronous regions, are designed by the evolutionary process to resolve frustrations in the global phase. We describe in detail one typical solution discovered by the GA, delineating the discovered synchronization algorithm in terms of embedded particles and their interactions. We also use …

Psusort: A Parallel External Sort For A Shared Memory Multiprocessor System, Sujata V. Ramamoorthy

Dissertations and Theses

A method to parallelize external sorts on a shared memory multiprocessing system is presented in this thesis. The main goal of the thesis is to develop a sorting package that is scale able and efficient. No prior knowledge of the nature, source or size of the data is assumed for this work. A dynamic load-balancing architecture is used with no static allocation of tasks to processes. The package consists of an interface and a kernel. The interface provides the sort with the following - the sort input, output and temporary work spaces as abstract data types (ADTs), memory available, number …

Scheduling Of Parallel Jobs On Dynamic, Heterogenous Networks, Dan Clark, Jeremy Casas, Steve Otto, Robert Prouty, Jonathan Walpole

Computer Science Faculty Publications and Presentations

In using a shared network of workstations for parallel processing, it is not only important to consider heterogeneity and differences in processing power between the workstations but also the dynamics of the system as a whole. In such a computing environment where the use of resources vary as other applications consume and release resources, intelligent scheduling of the parallel jobs onto the available resources is essential to maximize resource utilization. Despite this realization, however, there are few systems available that provide an infrastructure for the easy development and testing of these intelligent schedulers. In this paper, an infrastructure is presented …

Set-Theoretic Reconstructability Of Elementary Cellular Automata, Martin Zwick, Hui Shu

Complex Systems Faculty Publications and Presentations

Set-theoretic reconstructability analysis is used to characterize the structures of the mappings of elementary cellular automata. The minimum complexity structure for each ECA mapping, indexed by parameter σ, is more effective than the λ parameter of Langton as a predictor of chaotic dynamics.

Optimizing Object Invocation Using Optimistic Incremental Specialization, Jon Inouye, Andrew P. Black, Charles Consel, Calton Pu, Jonathan Walpole

Computer Science Faculty Publications and Presentations

To make object invocation efficient, it is important to minimize overhead. In general, overhead is incurred in order to maintain transparency; with the advent of mobile computer systems, persistence, increasing security and privacy concerns, transparency becomes more expensive and overhead is increasing. Invocation mechanisms maintain transparency by finding objects, choosing communication media, performing data translation into common formats (e.g., XDR), marshalling arguments, encrypting confidential data, etc. Performing all of these operations on every invocation would lead to unacceptable performance, so designers often avoid operations by specializing object invocation for more restricted environments. For example, the Emerald compiler performs several optimizations …

Towards An Ontology Of Problems, Martin Zwick

Complex Systems Faculty Publications and Presentations

Systems theory offers a language in which one might formulate a metaphysics (or more specifically an ontology) of problems. This proposal is based upon a conception of systems theory shared by von Bertalanffy, Wiener, Boulding, Rapoport, Ashby, Klir, and others, and expressed succinctly by Bunge, who considered game theory, information theory, feedback control theory, and the like to be attempts to construct an "exact and scientific metaphysics." Our prevailing conceptions of "problems" are concretized yet also fragmented and in fact dissolved by the standard reductionist model of science, which cannot provide a general framework for analysis. The idea of a …

Logging Subsystem Performance: Model And Evaluation, Thomas K. Clark

Dissertations and Theses

Transaction logging is an integral part of ensuring proper transformation of data from one state to another in modern data management. Because of this, the throughput of the logging subsystem can be critical to the throughput of an application. The purpose of this research is to break the log bottleneck at minimum cost.

We first present a model for evaluating a logging subsystem, where a logging subsystem is made up of a log device, a log backup device, and the interconnect algorithm between the two, which we term the log backup method. Included in the logging model is a set …

Objects To The Rescue! Or Httpd: The Next Generation Operating System, Andrew P. Black, Jonathan Walpole

Computer Science Faculty Publications and Presentations

This position paper suggests that object-oriented operating systems may provide the means to meet the ever-growing demands of applications. As an example of a successful OOOS, we cite the http daemon. To support the contention that httpd is in fact an operating system, we observe that it implements uniform naming, persistent objects and an invocation meta-protocol, specifies and implements some useful objects, and provides a framework for extensibility.We also believe that the modularity that is characteristic of OO systems should provide a performance benefit rather than a penalty. Our ongoing work in the Synthetix project at OGI is exploring the …

A User-Level Process Package For Concurrent Computing, Ravi Konuru, Steve Otto, Jonathan Walpole, Robert Prouty, Jeremy Casas

Computer Science Faculty Publications and Presentations

A lightweight user-level process(ULP) package for parallel computing is described. Each ULP has its own register context, stack, data and heap space and communication with other ULPs is performed using locally synchronous, location transparent, message passing primitives. The aim of the package is to provide support for lightweight over-decomposition, optimized local communication and transparent dynamic migration. The package supports a subset of the Parallel Virtual Machine(PVM) interface[Sun90).

Genetic Algorithms And Artificial Life, Melanie Mitchell, Stephanie Forrest

Computer Science Faculty Publications and Presentations

Genetic algorithms are computational models of evolution that play a central role in many artificial-life models. We review the history and current scope of research on genetic algorithms in artificial life, giving illustrative examples in which the genetic algorithm is used to study how learning and evolution interact, and to model ecosystems, immune system, cognitive systems, and social systems. We also outline a number of open questions and future directions for genetic algorithms in artificial-life research

Adaptive Execution Of Data Parallel Computations On Networks Of Heterogeneous Workstations, Robert Prouty, Steve Otto, Jonathan Walpole

Computer Science Faculty Publications and Presentations

Parallel environments consisting of a network of heterogeneous workstations introduce an inherently dynamic environment that differs from multicomputers. Workstations are usually considered “shared” resources while multicomputers provide dedicated processing power. The number of workstations available for use is continually changing; the parallel machine presented by the network is in effect continually reconfiguring itself. Application programs must effectively adapt to the changing number of processing nodes while maintaining computational efficiency. This paper examines methods for adapting to this dynamic environment within the framework of explicit message passing under the data parallel programming model. We present four requirements which we feel a …

Comet: A Synthetic Benchmark For Message-Passing Architectures, Nalini Ganapati, Steve Otto, Jonathan Walpole

Computer Science Faculty Publications and Presentations

Rapid advances in hardware technology have led to wide diversity in parallel computer architectures. This diversity makes it difficult to evaluate or compare the performance of different parallel computers. Existing benchmarks tend either to be too architecture-specific, or too high-level. Both problems can result in benchmarks that not only provide insufficient information on the performance characteristics of the computer being tested, but are also difficult to port. New benchmarking approaches are needed for new architectural classes, particularly distributed-memory, message-passing computers. This paper focuses on benchmarking distributed-memory message-passing computers. A synthetic benchmark called CoMet (COmmunication METrics), is presented. CoMet is based …

Script-Based Qos Specifications For Multimedia Presentations, Richard Staehli, Jonathan Walpole

Computer Science Faculty Publications and Presentations

Multimedia presentations can convey information not only by the sequence of events but by their timing. The correctness of such presentations thus depends on the timing of events as well as their sequence and content. This paper introduces a formal specification language for playback of real-time presentations. The main contribution of this language is a quality of service (QOS) specification that relaxes resolution and synchronization requirements for playback. Our definitions give a precise meaning to the correctness of a presentation. This specification language will form the basis for a QOS interface for reservation of operating system resources.

Data Dependence In Programs Involving Indexed Variables, Borislav Nikolik

Dissertations and Theses

Symbolic execution is a powerful technique used to perform various activities such as program testing, formal verification of programs, etc. However, symbolic execution does not deal with indexed variables in an adequate manner. Integration of indexed variables such as arrays into symbolic execution would increase the generality of this technique. We present an original substitution technique that produces array-term-free constraints as a counterargument to the commonly accepted belief that symbolic execution cannot handle arrays. The substitution technique deals with constraints involving array terms with a single aggregate name, array terms with multiple aggregate names, and nested array terms. Our approach …

Evaluating The Effectiveness Of Certain Metrics In Measuring The Quality Of End User Documentation, Ronald Morrison

Dissertations and Theses

Traditional methods of evaluating quality in computer end user documentation have been subjective in nature, and have not been widely used in practice. Attempts to quantify quality and more narrowly define the essential features of quality have been limited -- leaving the issue of quality largely up to the writer of the user manual.

Quantifiable measures from the literature, especially Velotta (1992) and Brockman (1990), have been assembled into a set of uniformly weighted metrics for the measurement of document quality. This measure has been applied to the end user documentation of eighty-two personal computer packages. End user documentation is …

A Cognitively Motivated System For Software Component Reuse, Michael Joseph Mateas

Dissertations and Theses

Software reuse via component libraries suffers from the twin problems of code location and comprehension. The Intelligent Code Object Planner (ICOP) is a cognitively motivated system that facilitates code reuse by answering queries about how to produce an effect with the library. It can plan for effects which are not primitive with respect to the library by building a plan that incorporates multiple components. The primary subsystems of ICOP are a knowledge base which describes the ontology of the library, a natural language interface which translates user queries into a formal effect language (predicates), a planner which accepts the effect …

Difficulties Experienced Procedural Programmers Encounter When Transferring To An Object-Oriented Programming Paradigm, Scott Andrew Machaffie

Dissertations and Theses

Experienced procedural programmers seem to have difficulty when transferring from a procedural language to an object-oriented language. The problem is how to assist the experienced procedural programmers to make this shift. The long term goal of this research is to identify areas where programmers have problems and to develop an automated system to help them overcome these difficulties.

This study examines the class designs produced by procedural programmers and the effect of specifications and domain knowledge on class designs. Two types of specifications were used: those written from a procedural point of view which emphasized the functions and those written …

Comprehension Of Literate Programs By Novice And Intermediate Programmers, Christopher Forrest Bertholf

Dissertations and Theses

The studies reported herein compare comprehension of Lit style literate programs to that of traditional modular programs documented by embedded comments. Novice and intermediate programmers participated in three experiments designed to determine the comprehensibility of literate programs written using a language-independent system for abstraction-oriented literate programming compared with programs written using traditional modular programming techniques (traditional modular programs). Programs were written in either the C or FORTRAN programming language. Half of the subjects in each group received a literate program, while the other half received a traditional modular program with embedded documentation. Subjects received a problem specification, input and output …

Matching Points To Lines: Sonar-Based Localization For The Psubot, Kevin Blythe Stanton

Dissertations and Theses

The PSUBOT (pronounced pea-es-you-bought) is an autonomous wheelchair robot for persons with certain disabilities. Its use of voice recognition and autonomous navigation enable it to carry out high level commands with little or no user assistance. We first describe the goals, constraints, and capabilities of the overall system including path planning and obstacle avoidance. We then focus on localization-the ability of the robot to locate itself in space. Odometry, a compass, and an algorithm which matches points to lines are each employed to accomplish this task. The matching algorithm (which matches "points" to "lines") is the main contribution to this …

When Will A Genetic Algorithm Outperform Hill-Climbing?, Melanie Mitchell, John H. Holland

Computer Science Faculty Publications and Presentations

In this paper we review some previously published experimental results in which a simple hillclimbing algorithm-Random Mutation Hill-Climbing (RMHC)-significantly outperforms a genetic algorithm on a simple "Royal Road" function. vVe present an analysis of RMHC followed by an analysis of an "idealized" genetic algorithm (IGA) that is in turn significantly faster than RMHC. We isolate the features of the IGA that allow for this speedup, and discuss how these features can be incorporated into a real GA and a fitness landscape, making the GA better approximate the IGA. We use these features to design a modified version of the previously …

Revisiting The Edge Of Chaos: Evolving Cellular Automata To Perform Computations, Melanie Mitchell, Peter T. Hraber, James P. Crutchfield

Computer Science Faculty Publications and Presentations

No abstract provided.

On Matching Ann Structure To Problem Domain Structure, George G. Lendaris, Martin Zwick, Karl Mathia

Complex Systems Faculty Publications and Presentations

To achieve reduced training time and improved generalization with artificial neural networks (ANN, or NN), it is important to use a reduced complexity NN structure. A "problem" is defined by constraints among the variables describing it. If knowledge about these constraints could be obtained a priori, this could be used to reduce the complexity of the ANN before training it. Systems theory literature contains methods for determining and representing structural aspects of constrained data (these methods are herein called GSM, general systems method). The suggestion here is to use the GSM model of the given data as a pattern for …

A Study Of Dynamic Optimization Techniques: Lessons And Directions In Kernel Design, Calton Pu, Jonathan Walpole

Computer Science Faculty Publications and Presentations

The Synthesis kernel [21,22,23,27,28] showed that dynamic code generation, software feedback, and fine-grain modular kernel organization are useful implementation techniques for improving the performance of operating system kernels. In addition, and perhaps more importantly, we discovered that there are strong interactions between the techniques. Hence, a careful and systematic combination of the techniques can be very powerful even though each one by itself may have serious limitations. By identifying these interactions we illustrate the problems of applying each technique in isolation to existing kernels. We also highlight the important common under-pinnings of the Synthesis experience and present our ideas on …

Compiling Ace For Distributed-Memory Machines, Jun Song

Dissertations and Theses

Distributed-memory machines offer a very high level of performance, flexibility and scalability. But the memory organization of this kind of machine determines that processes on different processors must communicate explicitly by sending and receiving messages. As a result, the programmer faces the enormously difficult task of detailed planning of algorithm-irrelevant, low-level communication issues. This level of programming resembles writing assembly programs for a sequential machine.

ACE is a message-passing language with abstract communication statements. It was defined by Dr. Jingke Li at Portland State University. The communication in ACE is still explicit, but it is abstracted to a higher level. …

Porting Chorus To The Pa-Risc: Overall Evaluation, Jonathan Walpole, Marion Hakanson, Jon Inouye, Ravi Konuru

Computer Science Faculty Publications and Presentations

This document is part of a series of reports describing the design decisions made in porting the Chorus Operating System kernel to the Hewlett-Packard 9000 Series 800 workstation. This document summarizes the matches and mis-matches between Chorus and the PA-RISC and outlines the general lessons learned during the project.

This document is intended for people who are interested in (a) the separation of machinedependent micro-kernel code from machine-independent micro-kernel code, (b) the interaction between operating system design and the PA-RISC architecture, and (c) the portability ofthe Chorus operating system.

The first report in the series, Porting Chorus to the PA-RISe: …

Porting Chorus To The Pa-Risc: Booting, Jon Inouye, Ravi Konuru, Jonathan Walpole, Marion Hakanson

Computer Science Faculty Publications and Presentations

We started out with the low level Tut (HP-CX 2.0) boot code. One of our goals was to reuse as much of this code as possible, which would reduce the amount of low level code we would have to debug. This was very important, especially fiince the RP 9000/834 has a very complex I/O architecture and we lacked any sophisticated debugging tools. Writing the PA-Chorus boot code involved modifying the Tut code to match the Chorus startup sequence. In the remainder of this section, we present an overview of the PA-RISC boot mechanisms and the Chorus startup sequence. Sectlon 2 …

Porting Chorus To The Pa-Risc: Virtual Memory Manager, Jon Inouye, Marion Hakanson, Ravi Konuru, Jonathan Walpole

Computer Science Faculty Publications and Presentations

This document describes the port ofthe Chorus virtual memory manager to the Hewlett-Packard Precision Architecture rusc (PA-RISC) workstation. The information contained in this paper will be of interest to people who:

• intend to port the Chorus virtual memory section. • intend to port a virtual memory design to the Hewlett-Packard PA-RISC.

The reader is strongly encouraged to read the following PA-Chorus documents before reading this document:

• Technical Report CSE-92-3, Porting Chorus to the PA-RISC: Project Overview

Porting Chorus To The Pa-Risc: Project Overview, Jonathan Walpole, Marion Hakanson, Jon Inouye, Ravi Konuru

Computer Science Faculty Publications and Presentations

This document is part of a series of reports describing the design decisions made in porting the Chorus Operating System to the Hewlett-Packard 9000 Series 800 workstation. This document presents an overview of the project, and outlines the other reports in the series and the relationships between them.

Porting Chorus To The Pa-Risc: Building, Debugging, Testing And Validation, Ravi Konuru, Marion Hakanson, Jon Inouye, Jonathan Walpole

Computer Science Faculty Publications and Presentations

This document is part of a series of reports describing the design decisions made in porting the Chorus Operating System to the Hewlett-Packard 9000 Series 800 workstation. This document describes the environment for building the Chorus kernel, the various kernel tests, and the debugging environment used for porting the Chorus operating system to the HP PA-RISC.

The information contained in this paper will be of interest to people who wish to:

• Use the PA-Chorus kernel for development and/or modification, • Know about the build environment for Chorus kernel on PA-RISC, • Know about the PA-Chorus approach to debugging, • …