Computer Sciences Commons^™

Ensemble Learning Models For Large-Scale Time Series Forecasting In Supply Chain, Minjuan Zhang

Dissertations

Machine learning and AI techniques are transforming supply chain forecasting, driven by the expanding availability of data assets. These advanced methods offer powerful opportunities to optimize management processes, reduce operational costs, and enhance strategic decision-making, which is crucial for enterprise success. However, conventional statistical approaches, such as Autoregressive Integrated Moving Average Models (ARIMA), dynamic regression, and Unobserved Component Models (UCMs)—which have long dominated time series forecasting—often fall short in accuracy and scalability. These traditional models face limitations in batch processing, handling large-scale data, addressing uncertainty-induced disruptions, and synchronizing demand-supply scenarios.

To address these challenges, a novel class of AI-powered ensemble …

Machine Learning Methods For Pattern Recognition Analysis Of Genomic And Molecular Data, Kuang Du

Dissertations

While immune therapies achieve remarkable success in treating various cancers, only a subset of patients achieves a durable clinical response, and many exhibit innate or acquired resistance. Precision medicine aims to tailor treatments to individual patients based on specific biological markers, ensuring that each patient receives the therapy most likely to be effective. Predictive biomarkers and gene signatures offer potential for more personalized treatment strategies by identifying patients likely to benefit. Recent studies suggest that gene signatures, comprising sets of genes, hold predictive value for certain clinical variables. Typically derived from biological expert knowledge, these signatures demonstrate substantial predictive potential, …

Knowledge Diffusion In Networks Of Artificial Learners, Ehsan Beikihassan

Dissertations

The dissertation draws inspiration from the topic of peer learning in the social sciences and the study of information dissemination and knowledge diffusion in network science. In particular, it introduces and studies a setting involving a population or network of artificial learners, with the objective of optimizing aggregate performance measures under constraints on training resources. In this context, natural knowledge diffusion processes in networks of interacting artificial learners are studied. The term "natural" refers to processes that emulate human peer learning, where the internal state and learning processes of students remain largely opaque, and the main degree of freedom lies …

Interactive Visualization Workflows For Mitigating Analytical Uncertainty, Kaustav Bhattacharjee

Dissertations

This dissertation takes a process-centric and stakeholder-first perspective for handling analytical uncertainty: the form of uncertainty that confronts data analysts' insight-generation processes in high-consequence decision-making scenarios. The cost of an incorrect decision when data is used for movie recommendations as opposed to when personal data is used to drive insights or when data-driven modeling is used to drive real-time decisions for maintaining the health of a grid are vastly different in terms of consequences. This dissertation looks at analytical uncertainty in two real-world scenarios: i) how sensitive information leakage can be prevented during the open data release process with data …

Crowd-Sourced Learning For Computer Graphics Applications, Yunhao Zhang

Dissertations

Computer Graphics (CG) revolves around virtual content creation using computational methods, spanning applications from games to visual effects. Typically, the creation of CG content is led by expert practitioners who guide computational algorithms towards satisfactory results. Thus, creating CG content often requires manual iterations encompassing algorithm design, parameter tuning, and aesthetic feedback. This work investigates how to leverage crowd-sourcing to streamline such creation processes, focusing on animation and simulation. In animation, a novel crowd-sourcing framework is proposed for combat animation, enabling users to analyze motion similarities, and retrieve matching motions using novel crowd-sourced motion features. Such features enable quantifying previously …

Surveying The Role Of Visual Analytics In Human-Machine Teaming, Naga Datha Saikiran Battula

Theses

Humans and machines both possess their unique capabilities and have their strengths and weaknesses, which can be complementary to one another and allow them to achieve a common goal. Teaming in the modern era involves text prompts, voice commands, gesture recognition, touch interfaces, and the latest visualization techniques that allow parties/agents to interact. Communication through visualization plays a vital role in allowing robust insights to be gained through a glance. Using visualization as a medium between humans and machines can increase the communication bandwidth. Human-machine teaming has witnessed much progress, with many theories and practical examples emerging. In the report, …

Automated Segmentation Of The Ulnar Nerve In Mri Using Deep Learning Techniques, Akhil Nagulapalli

Theses

Cubital Tunnel Syndrome (CuTS), a condition caused by compression of the ulnar nerve, results in numbness, tingling, pain, and even muscle atrophy, affecting fine motor skills and diminishing patient quality of life. Accurate diagnosis of CuTS is challenging, as current diagnostic methods—including clinical exams, nerve conduction studies, and unaided MRI—often lack the precision to reliably identify the nerve and detect compression in its early stages. Deep learning-based segmentation offers a promising solution, enabling precise and automated identification of nerve structures in MRI images, which could significantly improve diagnostic accuracy and support timely intervention.

A novel deep learning model for segmenting …

Multi-Label Classification Using Conformal Prediction, Chhavi Tyagi

Dissertations

In many machine learning applications, such as image tagging, document classi-fication, and medical diagnosis, a data instance can be associated with multiple classes in parallel so that each instance is associated with multiple response variables simultaneously defining multi-label classification. Standard multi-label classification methods that provide point predictions have been developed. They lack in quantifying the uncertainty of predictions. These methods also lack in accounting for label dependencies and are very computationally expensive. This dissertation develops two methods of multi-label classification using conformal prediction that quantify the uncertainty of predictions. Chapter 1 introduces notations and tools that have been used in …

Certifying Stability In Runge-Kutta Schemes: Algebraic Conditions And Semidefinite Programming, Austin Juhl

Dissertations

Numerical stability is a critical property for a time-integration scheme. In the context of Runge-Kutta methods applied to stiff differential equations, A-stability is one of the most basic and practically important notions of stability. Dating back to the work of Dahlquist, it has been known that A-stability is equivalent to the Runge-Kutta stability function satisfying a particular convex feasibility problem. Specifically, up to a transformation, the stability function lies in the convex cone of positive functions. In recent years, sum-of-squares optimization and semidefinite programming have become valuable tools in developing rigorous certificates of stability in dynamical systems. Therefore, it is …

Federated Learning Systems For Mobile Sensing Data, Xiaopeng Jiang

Dissertations

Federated Learning (FL) has emerged as a new distributed Deep Learning (DL) paradigm that enables privacy-aware training and inference on mobile devices with help from the cloud. This dissertation presents a comprehensive exploration of FL with mobile sensing data, covering systems, applications, and optimizations.

First, a mobile-cloud FL system, FLSys, is designed to balance model performance with resource consumption, tolerate communication failures, and achieve scalability. In FLSys, different DL models with different FL aggregation methods can be trained and accessed concurrently by different apps. In addition, FLSys provides advanced privacy-preserving mechanisms and a common API for third-party app developers to …

A Methodological Framework For Ontology Development, Enrichment, And Application In Natural Language Processing Tasks, Navya Martin Kollapally

Dissertations

Electronic Health Records (EHRs) have been widely used in healthcare to record demographics, vital signs, test results, immunizations, medical imaging reports, differential diagnoses, etc. It is now accepted that non-clinical (e.g., social) factors have a substantial influence on health outcomes. Hence, it is desirable to record these Social and Commercial Determinants of Health (SDoH & CDoH) in an EHR. The "non-text parts" of EHR notes (e.g., data tables) rely on coded terms from underlying ontologies or terminologies to facilitate semantic interoperability. Ontologies help define concepts, the relationships between them, and instances that can be utilized in research.

The first accomplishment …

Numerical Techniques For Improving Simulations Of Tropical Cyclones, Yassine Tissaoui

Dissertations

The increasing frequency and intensity of tropical cyclones (TCs) due to climate change pose significant challenges for forecasting and mitigating their impacts. Despite advancements, accurately predicting TC rapid intensification (RI) remains a challenge. Large eddy simulation (LES) allows for explicitly resolving the large eddies involved in TC turbulence, thus providing an avenue for studying the mechanisms behind their intensification and RI. LES of a full tropical cyclone is very computationally expensive and its accuracy will depend on both explicit and implicit dissipation within an atmospheric model. This dissertation presents two novel numerical methodologies with the potential to improve the efficiency …

Empirical Exploration Of Software Testing, Samia Alblwi

Dissertations

Despite several advances in software engineering research and development, the quality of software products remains a considerable challenge. For all its theoretical limitations, software testing remains the main method used in practice to control, enhance, and certify software quality. This doctoral work comprises several empirical studies aimed at analyzing and assessing common software testing approaches, methods, and assumptions. In particular, the concept of mutant subsumption is generalized by taking into account the possibility for a base program and its mutants to diverge for some inputs, demonstrating the impact of this generalization on how subsumption is defined. The problem of mutant …

Network Slicing And Noma Enabled Mobile Edge Computing For Next-Generation Networks, Mohammad Arif Hossain

Dissertations

The advent of next-generation wireless networks ushers in a new era of potential, harnessing cutting-edge technologies like mobile edge computing (MEC), non-orthogonal multiple access (NOMA), and network slicing as pivotal drivers of transformation. Within this landscape, an innovative approach is proposed by introducing a NOMA-enabled network slicing technique within MEC networks. This approach aims to achieve multiple objectives: meeting stringent quality of service requirements, minimizing service latency, and enhancing spectral efficiency. By seamlessly integrating NOMA with network slicing in edge computing environments, significant reductions in overall latency are achieved, alongside ensuring optimal resource allocation for NOMA users. To address these …

Information Theoretic Bounds For Capacity And Bayesian Risk, Ian Zieder

Dissertations

In this dissertation, the problem of finding lower error bounds on the minimum mean-squared error (MMSE) and the maximum capacity achieving distribution for a specific channel is addressed. Presented are two parts, a new lower bound on the MMSE and upper and lower bounds on the capacity achieving distribution for a Binomial noise channel. The new lower bound on the MMSE is achieved via use of the Poincare inequality. It is compared to the performance of the well known Ziv-Zakai error bound. The second part considers a binomial noise channel and is concerned with the properties of the capacity-achieving distribution. …

Sensing With Integrity: Responsible Sensor Systems In An Era Of Ai, David Eisenberg

Dissertations

Deep and machine learning now offer immense benefits for consumer choice, decision-making, medicine, mental health and education, smart cities, and intelligent transportation and driver safety. However, as communication and Internet technology further advances, these benefits have the potential to be outweighed by compromises to privacy, personal freedom, consumer trust, and discrimination. While ethical consequences for personal freedom and equity rise from these technological advances, the issue may not be the technology itself but a lack of regulation and policy that allow abuses to occur. A first study examines how emerging sensor-based technologies, limited to only accelerometer and gyroscope data from …

A Machine Learning-Assisted Steering And Scheduling Framework For Big-Data Scientific Workflows On Heterogeneous Computing Platforms, Yijie Zhang

Dissertations

In next-generation scientific applications, the exponential growth of big data necessitates advanced techniques for efficient data storage, processing, and analysis. This has led to the construction of intricate computing workflows, managed and orchestrated by powerful engines in big data systems as exemplified by Hadoop. As scientific applications increasingly shift towards simulation-centric approaches, traditional methodologies face new challenges in accommodating the complexity of extreme-scale numerical modeling with numerous tunable parameters. To address these challenges, this dissertation propose to develop a machine learning-assisted framework that enables autonomous computational steering of scientific simulations and optimized execution of big-data workflows on heterogeneous platforms. This …

The Next Strike: Pioneering Forward-Thinking Attack Techniques With Rowhammer In Dram Technologies, Nakul Kochar

Theses

In the realm of DRAM technologies this study investigates RowHammer vulnerabilities in DDR4 DRAM memory across various manufacturers, employing advanced multi-sided fault injection techniques to impose attack strategies directly on physical memory rows. Our novel approach, diverging from traditional victim-focused methods, involves strategically allocating virtual memory rows to their physical counterparts for more potent attacks. These attacks, exploiting the inherent weaknesses in DRAM design, are capable of inducing bit flips in a controlled manner to undermine system integrity. We employed a strategy that compromised system integrity through a nuanced approach of targeting rows situated at a distance of two rows …

Model-Based Deep Autoencoders For Clustering Single-Cell Rna Sequencing Data With Side Information, Xiang Lin

Dissertations

Clustering analysis has been conducted extensively in single-cell RNA sequencing (scRNA-seq) studies. scRNA-seq can profile tens of thousands of genes' activities within a single cell. Thousands or tens of thousands of cells can be captured simultaneously in a typical scRNA-seq experiment. Biologists would like to cluster these cells for exploring and elucidating cell types or subtypes. Numerous methods have been designed for clustering scRNA-seq data. Yet, single-cell technologies develop so fast in the past few years that those existing methods do not catch up with these rapid changes and fail to fully fulfil their potential. For instance, besides profiling transcription …

Models And Algorithms For Promoting Diverse And Fair Query Results, Md Mouinul Islam

Dissertations

Ensuring fairness and diversity in search results are two key concerns in compelling search and recommendation applications. This work explicitly studies these two aspects given multiple users' preferences as inputs, in an effort to create a single ranking or top-k result set that satisfies different fairness and diversity criteria. From group fairness standpoint, it adapts demographic parity like group fairness criteria and proposes new models that are suitable for ranking or producing top-k set of results. This dissertation also studies equitable exposure of individual search results in long tail data, a concept related to individual fairness. First, the dissertation focuses …

Quantifying Balance: Computational And Learning Frameworks For The Characterization Of Balance In Bipedal Systems, Kubra Akbas

Dissertations

In clinical practice and general healthcare settings, the lack of reliable and objective balance and stability assessment metrics hinders the tracking of patient performance progression during rehabilitation; the assessment of bipedal balance plays a crucial role in understanding stability and falls in humans and other bipeds, while providing clinicians important information regarding rehabilitation outcomes. Bipedal balance has often been examined through kinematic or kinetic quantities, such as the Zero Moment Point and Center of Pressure; however, analyzing balance specifically through the body's Center of Mass (COM) state offers a holistic and easily comprehensible view of balance and stability.

Building upon …

Learning Representations For Effective And Explainable Software Bug Detection And Fixing, Yi Li

Dissertations

Software has an integral role in modern life; hence software bugs, which undermine software quality and reliability, have substantial societal and economic implications. The advent of machine learning and deep learning in software engineering has led to major advances in bug detection and fixing approaches, yet they fall short of desired precision and recall. This shortfall arises from the absence of a 'bridge,' known as learning code representations, that can transform information from source code into a suitable representation for effective processing via machine and deep learning.

This dissertation builds such a bridge. Specifically, it presents solutions for effectively learning …

Fortifying Robustness: Unveiling The Intricacies Of Training And Inference Vulnerabilities In Centralized And Federated Neural Networks, Guanxiong Liu

Dissertations

Neural network (NN) classifiers have gained significant traction in diverse domains such as natural language processing, computer vision, and cybersecurity, owing to their remarkable ability to approximate complex latent distributions from data. Nevertheless, the conventional assumption of an attack-free operating environment has been challenged by the emergence of adversarial examples. These perturbed samples, which are typically imperceptible to human observers, can lead to misclassifications by the NN classifiers. Moreover, recent studies have uncovered the ability of poisoned training data to generate Trojan backdoored classifiers that exhibit misclassification behavior triggered by predefined patterns.

In recent years, significant research efforts have been …

Bacterial Motion And Spread In Porous Environments, Yasser Almoteri

Dissertations

Micro-swimmers are ubiquitous in nature from soil and water to mammalian bodies and even many technological processes. Common known examples are microbes such as bacteria, micro-algae and micro-plankton, cells such as spermatozoa and organisms such as nematodes. These swimmers live and have evolved in multiplex environments and complex flows in the presence of other swimmers and types, inert particles and fibers, interfaces and non-trivial confinements and more. Understanding the locomotion and interactions of these individual micro-swimmers in such impure viscous fluids is crucial to understanding the emergent dynamics of such complex systems, and to further enabling us to control and …

Diversification And Fairness In Top-K Ranking Algorithms, Mahsa Asadi

Dissertations

Given a user query, the typical user interfaces, such as search engines and recommender systems, only allow a small number of results to be returned to the user. Hence, figuring out what would be the top-k results is an important task in information retrieval, as it helps to ensure that the most relevant results are presented to the user. There exists an extensive body of research that studies how to score the records and return top-k to the user. Moreover, there exists an extensive set of criteria that researchers identify to present the user with top-k results, and result diversification …

Human-Ai Complex Task Planning, Sepideh Nikookar

Dissertations

The process of complex task planning is ubiquitous and arises in a variety of compelling applications. A few leading examples include designing a personalized course plan or trip plan, designing music playlists/work sessions in web applications, or even planning routes of naval assets to collaboratively discover an unknown destination. For all of these aforementioned applications, creating a plan requires satisfying a basic construct, i.e., composing a sequence of sub-tasks (or items) that optimizes several criteria and satisfies constraints. For instance, in course planning, sub-tasks or items are core and elective courses, and degree requirements capture their complex dependencies as constraints. …

Program Analysis For Android Security And Reliability, Sydur Rahaman

Dissertations

The recent, widespread growth and adoption of mobile devices have revolutionized the way users interact with technology. As mobile apps have become increasingly prevalent, concerns regarding their security and reliability have gained significant attention. The ever-expanding mobile app ecosystem presents unique challenges in ensuring the protection of user data and maintaining app robustness. This dissertation expands the field of program analysis with techniques and abstractions tailored explicitly to enhancing Android security and reliability. This research introduces approaches for addressing critical issues related to sensitive information leakage, device and user fingerprinting, mobile medical score calculators, as well as termination-induced data loss. …

Data-Driven 2d Materials Discovery For Next-Generation Electronics, Zeyu Zhang

Dissertations

The development of material discovery and design has lasted centuries in human history. After the concept of modern chemistry and material science was established, the strategy of material discovery relies on the experiments. Such a strategy becomes expensive and time-consuming with the increasing number of materials nowadays. Therefore, a novel strategy that is faster and more comprehensive is urgently needed. In this dissertation, an experiment-guided material discovery strategy is developed and explained using metal-organic frameworks (MOFs) as instances. The advent of 7r-stacked layered MOFs, which offer electrical conductivity on top of permanent porosity and high surface area, opened up new …

On Explainability Of Neural Networks, Cem Benar

Dissertations

It is widely reported that deep neural networks outperform most competitors for a range of applications. The state-of-the-art neural networks have built-in inductive bias of architectural choices, regularizations, optimizer types, and initialization methods. Using inductive bias is intuitive to enhance the model approximation. Deep neural networks are mostly dense and heavily overparameterized. They tend to be biased towards low-rank solutions to reduce complexity and improve generalization performance, known as implicit regularization. The implicit regularization as observed in specific architectures and various real-world data sets suggests to overparameterize neural networks judiciously and learn compressed representations (lower rank approximation) with improved performance. …

Toward Smart And Efficient Scientific Data Management, Jinzhen Wang

Dissertations

Scientific research generates vast amounts of data, and the scale of data has significantly increased with advancements in scientific applications. To manage this data effectively, lossy data compression techniques are necessary to reduce storage and transmission costs. Nevertheless, the use of lossy compression introduces uncertainties related to its performance. This dissertation aims to answer key questions surrounding lossy data compression, such as how the performance changes, how much reduction can be achieved, and how to optimize these techniques for modern scientific data management workflows.

One of the major challenges in adopting lossy compression techniques is the trade-off between data accuracy …