Computer Sciences Commons^™

Optical Character Recognition For Early Handwriting Legibility Assessment, Franceli L. Cibrian, Kayla Anderson, Yingying 'Yuki' Chen, Lauren Min, Lizbeth Escobedo

Engineering Faculty Articles and Research

Monitoring children’s handwriting, such as avoiding writing assignments, displaying uneven letter formation, or showing slow writing speed, can help identify developmental and academic issues early. Poor handwriting affects up to 34% of children, leading to academic and self-esteem challenges. Handwriting assessments, typically conducted by teachers, are often delayed due to workload and could be subjective and inconsistent. This paper explores the potential of Optical Character Recognition (OCR) technology to augment and ease handwriting assessments. Based on an evaluation of 10 OCR algorithms using 33 handwriting samples assessed by two experts, the research indicates that Pen to Print and Google are …

Integrative Computational Modeling Of Distinct Binding Mechanisms For Broadly Neutralizing Antibodies Targeting Sars-Cov-2 Spike Omicron Variants: Balance Of Evolutionary And Dynamic Adaptability In Shaping Molecular Determinants Of Immune Escape, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

In this study, we conducted a comprehensive analysis of the interactions between the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein and four neutralizing antibodies—S309, S304, CYFN1006, and VIR-7229. Using integrative computational modeling that combined all-atom molecular dynamics (MD) simulations, mutational scanning, and MM-GBSA binding free energy calculations, we elucidated the structural, energetic, and dynamic determinants of antibody binding. Our findings reveal distinct dynamic binding mechanisms and evolutionary adaptation driving the broad neutralization effect of these antibodies. We show that S309 targets conserved residues near the ACE2 interface, leveraging synergistic van der Waals and electrostatic interactions, while S304 focuses on …

Towards Multi-Modal Multi-Document Understanding Capabilities In Foundation Models, Chuhan Li

Computer Science Theses

Contemporary foundation models are predominantly evaluated on isolated documentor image-understanding tasks, thereby overlooking the inherent multimodal multi-document reasoning that characterizes scientific inquiry. To bridge this gap, M3SCIQA is introduced, aMulti-Modal,Multi-document Scientific Question Answering benchmark crafted to test foundation models in practical scientific research settings. A comprehensive evaluation of 18 leading foundation models shows a substantial performance gap between models and human experts. Detailed error analysis reveals persistent deficiencies in both scientific visual reasoning tasks and long-range retrieval. Addressing the former, SPACECUE offers a concise yet effective visual prompting that overlays grid coordinates and Semantic-SAM masks …

Programming A More Efficient Onboarding Process For New Employees, Long H. Pham

Undergraduate Honors Theses

The current onboarding process for new hires in the University of San Diego’s Shiley-Marcos School of Engineering is inefficient. There is no central location where new hires and administrators can track onboarding progress. Both parties have to manage multiple email chains and write their own reminders to keep track of everything. This leads to delays, missing deadlines, and confusion for both parties. A web-based onboarding application has been developed recently to address these issues and streamline the onboarding process for new hires. However, this application contains several accessibility issues and does not follow all of the standards for effective employee …

Hybrid Graph-Recurrent Architecture For Citation Recommendation Via Future Embedding Forecasting, Mohammad Ausaf Ali Haqqani

Computer Science and Engineering Theses and Dissertations

The rapid expansion of scientific literature has intensified the challenge of identifying relevant citations, particularly for newly published or under-cited papers. Traditional citation recommendation systems typically model static relationships or respond to past citation activity, offering limited predictive power for emerging works. In response, this thesis presents a temporal modeling framework for citation recommendation that anticipates future scholarly relevance by forecasting the latent representations of academic papers.

Building on prior work that utilized Temporal Graph Networks (TGNs) to model dynamic citation flows, we propose Graph-Time, a hybrid architecture that integrates a Graph Transformer with a GRU-based time series predictor. The …

Real-World Implementation Of A Noninvasive, Ai-Augmented, Anemia-Screening Smartphone App And Personalization For Hemoglobin Level Self-Monitoring, Robert G. Mannino, Julie Sullivan, Jennifer K. Frediani, Paul George, Jeremy Whitson, James Tumlin, L. Andrew Lyon, Erika A. Tyburski, Wilbur A. Lam

Engineering Faculty Articles and Research

Anemia, characterized by low blood hemoglobin (Hgb) levels, afflicts >2 billion individuals worldwide. Here, we report real-world data generated by a smartphone app that noninvasively screens for anemia using only “fingernail selfies.” App data for anemia screening were obtained from >1.4 million uses across the United States enabling geographic mapping of Hgb levels. Of those, 9,061 users also self-reported complete blood count Hgb levels for comparison, resulting in accuracy and performance that match gold standard laboratory testing and a sensitivity and specificity of 89% and 93%, respectively, when using an anemia cutoff of 12.5 g/dL. Geotagged data enabled construction of …

Magic: The Gathering Deck Testing And Optimization, Ian B. Watson

Honors Theses

The goal of this project is to provide a tool for players of the trading card game Magic: the Gathering to determine whether or not a given deck is optimally built by outputting relevant information regarding its optimality. This is done through a simulator that plays a one-sided game, recording what cards are played, what turn they are played, and how much mana is left over at the end of every turn. The simulator was tested with both optimized and unoptimized decks to show how it can be used to diagnose both.

Optimizing Information Security In Cloud Environments: A Risk Management Approach And Guide For Enterprise Cloud Security, Joshua Olusegun Oyeniyi, Oluwashina Akinloye Oyeniran

Journal of Cybersecurity Education, Research and Practice

In recent years, cloud computing has become increasingly integral to organizational operations due to its scalability, accessibility and cost effectiveness in managing data and resources. However, the rise in security threats and attacks on cloud environments necessitates having robust measures in place to protect data confidentiality, integrity and availability. This paper presents an optimized approach to cloud information security management by reviewing the current threat landscape, evaluating key risk management frameworks, and provided practical solutions for enhancing enterprise cloud security. The study examined three leading cloud security frameworks: the Cloud Controls Matrix (CCM) known for its cloud-specific controls, the NIST …

Designing Ai-Driven Dining: A Ux Approach To Enhancing The Self-Service Experience, Kaylin Joung, Yuki Hayashi, Dailuaine Esguerra

Undergraduate Research Symposium Posters

Artificial intelligence has transformed many industries, yet its integration into self-dining experiences is still emerging. This research explores how AI can enhance self-dining by introducing technology like interactive kiosks and robot servers to improve efficiency, personalization, and customer convenience. By addressing current gaps, we aim to create a more seamless and engaging dining experience.

Supporting Novice Programmers With Scaffolded And Open-Ended Generative Ai Interfaces: Insights From A Design-Based Research Study, Justin Olmanson, Azadeh Hassani, Gretchen K. Larsen

Department of Teaching, Learning, and Teacher Education: Faculty Publications

In this study, we explore student experiences in coding and learning programming with scaffolded and unscaffolded generative AI interfaces. Specifically, we supported higher education students in using ChatGPT, an open ended interface for interacting with generative AI; and Giuseppe, a specialized interface with an OpenAI backend service that offers personalized supports specifically for helping students overcome early-stage challenges in learning to code, and working on education technology prototyping projects. This study contributes to the field by offering design insights for scaffolding initial learning interactions between generative AI interfaces and novice programmers. Our findings suggest that those new to coding welcome …

Usage Of Natural Language Processing And Deep-Learning Techniques On Thematic Apperception Tests To Predict Big Five Personality Traits, Blayten Jones

Electrical Engineering and Computer Science Undergraduate Honors Theses

The usage of personality as a method of behavioral prediction and outcomes of success has grown considerably over the last few decades. This project explores predicting user personality profiles via the Big Five personality index through the integration of advanced natural language processing techniques as well as neural networks. Using a dataset provided by Dr. James W. Pennebaker, participants analyze an image—formally referred to as a thematic apperception test—and write a thorough paragraph describing the details. This free-form text, along with their personality test results, is captured in a structured dataset. Many deep-learning and machine learning models have been used …

Managing Graphical Fidelity With Stylized Shaders For Independent Game Development, Benjamin A. Edens

Electrical Engineering and Computer Science Undergraduate Honors Theses

This paper outlines work performed by the author within the Unity3D game engine to gain preliminary experience with technical art implementation and suggests design choices that could be useful to other students or independent game developers to manage complexity within their games while maintaining visual appeal. The final product of the discussed project is a small game consisting of an outdoor urban city environment as well as an interior aquarium environment. This paper begins with the author’s motivations and goals for the project before describing the implementation of specific aspects of technical art, including 3D modeling, rigging, animation, level design, …

Capturing The Digital Scene: Applying Routine Activity Theory To Iot Smart Frames, Jordan Bakar

Theses/Capstones/Creative Projects

This project investigates the forensic risks and investigative challenges posed by smart frames, which are WiFi-enabled Internet of Things (IoT) devices used to store, display, and share digital media. These devices often collect and synchronize sensitive media, metadata, and behavioral logs across cloud ecosystems that lack adequate transparency and privacy safeguards. Routine Activity Theory (RAT) provides a criminological framework for examining how the convergence of a motivated offender, a suitable target, and the absence of capable guardianship creates opportunities for misuse and forensic exploitation. Smart frames represent ideal targets because of weak default security configurations, passive data synchronization, and limited …

Learning Educational Technology Prototyping With Generative Ai, Justin Olmanson, Azadeh Hassani, Gretchen K. Larsen

Department of Teaching, Learning, and Teacher Education: Faculty Publications

In this study, we use ethnographic methods, grounded theory, and an iterative analytical approach to explore participant experiences and strategies for engaging generative AI in support of both learning how to prototype educational technologies and learning to code. We examine how ChatGPT and Giuseppe (a scaffolded co-coding interface of our own design) influence students’ approaches to prototyping and programming. This study contributes to the field by: identifying specific challenges and affordances of generative AI in prototyping and educational technology development contexts; and offering insights into how educators, students, and learning technology developers can integrate generative AI in formative educational technology …

Exploring The Pedagogical Impact Of Software Development Live Streams: Informal Learning Opportunities For Software And Game Developers, Ella Kokinda

All Dissertations

Live streaming is an increasingly popular medium for throwing back the curtain on software development where streamers and viewers share their knowledge and experiences. Popular platforms like Twitch and YouTube enable developers to stream live coding sessions where people around the world can engage in real-time collaboration, feedback, knowledge sharing, and skill development. This work investigates the pedagogical implications and learning opportunities present in software and game development live streaming while focusing on the role of streaming as a learning environment and collaborative community. We begin by exploring summer camps as an informal learning opportunity for STEM education, highlighting the …

Comparative Analysis Of Classical And Machine Learning Pathfinding Approaches, Miguel Gapud

Honors Theses

Pathfinding is an essential task for any autonomous robot. Graph-based classical pathfinding algorithms and machine learning approaches have both been used for this end, but they are often not compared against each other. An implementation of end-to-end (E2E) pathfinding using Proximal Policy Optimization (PPO) and an Alexnet architecture is compared against an implementation of Hybrid A*. A digital twin in Unity3D is used as the testing environment with the Clearpath Dingo as the pathfinding robot. In machine learning, the robot is controlled using PPO through ROS-Noetic with a camera as its sensor. Hybrid A* and its controls are implemented directly …

Expressive And Interpretable User Engagement Prediction Using Multivariate Survival Processes, Akshay Aravamudan

Theses and Dissertations

The ability to characterize how information diffuses online is of paramount importance to stakeholders that are interested in tasks such as proposing solutions for mitigating and countering dis/misinformation, predicting user engagement of content in social media, planning marketing campaigns to roll-out products and planning dissemination of political campaign messaging among others. One such facet of learning the dynamics of information diffusion is the ability to predict user engagement or the popularity of a single piece of information as it spreads through an online medium. Existing works in this regard mainly either obfuscate user level information or utilize frameworks that are …

Exploring Educational Affordances Of Interactive Murals, Alyshia Bustos

Computer Science ETDs

Interactive murals are a new technology that blend traditional mural painting and embedded electronics. My work contrasts traditional STEAM projects by introducing youth to programming, building electronics, and interaction design principles within the context of designing and constructing interactive murals. Accordingly my dissertation addresses the following: 1) How can we integrate traditional mural practices and ubiquitous computing in an interactive mural, 2) How do interactive murals support youth in learning how to program and build electronics, and 3) How can we design learning activities that support youth as interaction designers?

To address my research questions, I first conducted technical tests …

Understanding Automation From A Computer Science Perspective, Matthew Donsig

Honors Program: Senior Projects (Public)

This thesis looks into automation and analyzes its benefits and problems. It begins with an explanation of a capstone project, automating the UNL State Museum’s reservation system. Problems of automation are presented in unsuccessful attempts and some pitfalls of automation. Next this thesis turns to an examination of artificial intelligence in automation. Along with that, we look at bias in automation and how people can bias automated tools or be biased by them. Turning successful examples of automation and then automation in manufacturing shows its benefits. Automation creates new jobs or changes work as much as it eliminates positions. At …

Ml Playground: Data Modification/Preprocessing And Model Simulation Tool, Marco D. Cerrato

Electronic Theses, Projects, and Dissertations

There is a heavy reliance on programming when it comes to learning machine learning (ML). This often creates barriers for students and newcomers unfamiliar with coding. While the lessons you learn in the classroom provide essential foundational understanding, some technical or practical aspects of ML—such as data preprocessing, feature engineering, and model tuning—are best learned through hands-on interaction. ML Playground was developed to act as a proof-of-concept application to address this gap by offering a browser-based, graphical user interface that lets users engage with core ML workflows without writing code. Designed with educational accessibility in mind, the application allows users …

A System And Method For Measuring Spatially Varying Surface Appearances With A Study Of Feathers, Jessica Baron-Lis

All Dissertations

Real-world materials, particularly biological structures such as feathers exhibit complex appearances that vary spatially across their surfaces. The field of computer graphics provides a means of understanding such surfaces through material modeling which uses both analytical models and data acquired from light-surface interactions. There are many efforts within the past decade in measuring materials for graphics, but common limitations in these works include not accounting for spatially varying properties and reliance on neural networks and synthetic datasets.

Feathers from modern birds present diverse appearances due to how light interacts with their unique hierarchical microstructures. Variations in those structures lead to …

Development Of Fuzzy Ontology For Explainable Artificial Intelligence For Decision-Making In Fuzzy Environment, Pavel Kosov

Chemical Technology, Control and Management

In modern artificial intelligence systems, there is an acute need to understand the decision-making logic of "black box" algorithms. Our research proposes an innovative method for increasing the transparency of such systems through the formalization of fuzzy explanatory mechanisms. We have developed an extension of existing ontological approaches by introducing the concept of fuzziness into the structure of explanatory properties, which allows overcoming the fundamental limitations of traditional XAI methods. The proposed formalization is based on the theory of collective mental models and principles of fuzzy logic, providing a more accurate reflection of uncertainty and subjectivity in expert knowledge. Our …

Ai-Based Accessibility Widget (Aibaw) Shortcomings For Blind Web Users, Joshua A. Rovira

LSU Master's Theses

With legal, ethical, and financial motivations to make their websites more accessible, many businesses and sites have begun to employ the use of artificial intelligence (AI) based widgets to automatically make necessary modifications to their sites' pages and subdomains. In this work, we conduct a qualitative case study to determine the efficacy of these AI tools as they pertain specifically to blind users. We analyze pages from twelve websites using accessiBe's AI accessibility widget and provide a taxonomy of their violations against the Web Content Accessibility Guidelines (WCAG) 2.1 level AA compliance. We found each website to bear numerous violations …

Simplifying 3d Printing Using Natural Language Processing, Jared E. Rosenberger

Undergraduate Theses

3D printing is a crucial technology with many applications in different fields. To be able to use this technology to its full extent, expertise in computer aided design (CAD) technology and 3D modeling is required. Many people interested in 3D printing do not have this expertise and thus cannot build custom models, and are consequently forced to buy them instead. Natural language processing (NLP) is one tool that can vastly simplify 3D modeling for those lacking CAD experience. Using NLP, someone can simply dictate what they want to be able to print, and a computer can then build a 3D …

36 - Investigation Of The Digital Footprint Of Scientific Research In Social Media – Preliminary Findings, Lee Logan, Dominik Soos, Sean Baker, Jian Wu

Undergraduate Research Symposium

Title: Investigation of The Digital Footprint of Scientific Research in Social Media – Preliminary Findings

Authors: Lee Logan, Sean Baker, Dominik Soos, Jian Wu

The spread of scientific information and research beyond the confines of academic institutions plays a central role in how the public understands and trusts modern sciences. Social media has become an essential means of dissemination for scholarly news, papers, and other forms of engagement. This research aims to explore how scientific research is disseminated over social media to understand its role as a bridge between peer-reviewed research and the public's overall understanding. To support the research …

Ai Models By Boodlebox: Purpose-Built Intelligence, Kyle Horn

SACAD: Scholarly Activities

Generative AI has transformed the way we interact with technology, enabling dynamic and intelligent conversations through AI-driven bots. This project explores my experience with BoodleBox, a platform that hosts AI chatbots, offering users access to leading AI models such as ChatGPT, Gemini, DALL·E, and DeepSeek. Through the FHSU Generative AI Initiative, I was granted access to experiment with these models and create my own custom AI bot tailored to specific needs. This poster highlights the process of developing a custom bot, including defining instructions, enforcing rules, and sharing the bot for others to use. Additionally, it discusses the background of …

Addressing Equity Issues In Elementary Computer Science Education: Knowns, Unknowns, And Implications For Future Work, Mike Karlin, Yin-Chan Janet Liao, Swati Mehta, Afreen Iqbal, Mahya Minaiy, Minhye Son, Jessica Pandya

Journal of Computer Science Integration

In 2016, a national coalition of stakeholders released the K-12 computer science (CS) framework. In the time since, there has been an increased push at the local, state, and national level to integrate CS knowledge and skills into K-12 education. Despite this push, significant equity issues exist within the field. While growing research has been done on CS equity issues at the high school level, we know these equity gaps often begin to emerge in elementary school where less is known. Therefore, we conducted a systematic literature review to better understand and explore the elementary CS equity research landscape from …

Raising Awareness About Hydrographic Careers Through Sea-Going Opportunities, Juliet Kinney, Rochelle Wigley, Sara Cardigos, Fahima Bellabad, Larissa Marques Freguette

Center for Coastal and Ocean Mapping

There is a worldwide shortage of hydrographic personnel (van Wegen, 2021, Hydro International 2008).  Calls for action to address this issue include the IHO’s Hydrography at Sea opportunities, while intiatiative such as Seabed 2030 are bringing broader attention to the field and helping to catalyze new discussions and partnerships in hydrography (IHO, 2024).  The global sea floor mapping community needs to develop a broader workforce pipeline.  We would like to highlight the importance of providing time at sea and leadership opportunities in developing a robust workforce.  We start with an overview of a selection of current exchange and training programs …

Adversarial Attacks And Defense Methods In Robotic Systems, Thanh D. Le

Shelby Hall Graduate Research Forum Presentations

Presentation slides for a presentation given at the 1st annual Shelby Hall Graduate Research Forum at the University of South Alabama.

Turbulence Prediction Using Non-Linear Phase Space Analysis, Jeremy Quijano

Shelby Hall Graduate Research Forum Posters

Our research presents a novel approach for turbulence prediction in computational fluid dynamics (CFD) simulations using a non-linear phase space analysis (NLPSA) and threshold algorithm. NLPSA has been utilized in medical applications to predict seizures, as well as in cybersecurity to detect malicious control and utilization of computing systems. NLPSA uses time-series data to learn the normal operating state of the system, then sets a threshold to predict when the system becomes abnormal. Turbulence prediction is similar, such that a fluid system changes from normal to abnormal. Turbulence prediction methods currently utilize machine learning tools, such as convolutional neural networks …