Computer Sciences Commons^™

Invasive Buckthorn Mapping: A Uav-Based Approach Utilizing Machine Learning, Gis, And Remote Sensing Techniques In The Upper Peninsula Of Michigan, Vikranth Madeppa

Dissertations, Master's Theses and Master's Reports

An Invasive species is a species that is alien or non-native to the ecosystem which causes harm to economic, environmental, or human health (E.O. 13112 of Feb 3, 1999). Invasive species have posed a serious threat to ecosystems across the globe. These invasive species have impacts on the biodiversity and productivity of invaded forests. Remotely sensed data is a valuable resource for understanding and addressing issues related to invasive species. This study presents a novel approach for mapping the distribution of two invasive plant species, Common and Glossy Buckthorn, using unmanned aerial vehicles (UAVs), machine learning algorithms, geographic information systems …

Progenitor Cell Isolation From Mouse Epididymal Adipose Tissue And Sequencing Library Construction, Qianglin Liu, Chaoyang Li, Yuxia Li, Leshan Wang, Xujia Zhang, Buhao Deng, Peidong Gao, Mohammad Shiri, Fozi Alkaifi, Junxing Zhao, Jacqueline M. Stephens, Constantine A. Simintiras, Joseph Francis, Jiangwen Sun, Xing Fu

Computer Science Faculty Publications

Here, we present a protocol to isolate progenitor cells from mouse epididymal visceral adipose tissue and construct bulk RNA and assay for transposase-accessible chromatin with sequencing (ATAC-seq) libraries. We describe steps for adipose tissue collection, cell isolation, and cell staining and sorting. We then detail procedures for both ATAC-seq and RNA sequencing library construction. This protocol can also be applied to other tissues and cell types directly or with minor modifications.

For complete details on the use and execution of this protocol, please refer to Liu et al. (2023).¹

*¹ Liu, Q., Li, C., Deng, B., Gao, P., …

Distributed Spatial Data Sharing: A New Era In Sharing Spatial Data, Majid Hojati

Theses and Dissertations (Comprehensive)

The advancements in information and communications technology, including the widespread adoption of GPS-based sensors, improvements in computational data processing, and satellite imagery, have resulted in new data sources, stakeholders, and methods of producing, using, and sharing spatial data. Daily, vast amounts of data are produced by individuals interacting with digital content and through automated and semi-automated sensors deployed across the environment. A growing portion of this information contains geographic information directly or indirectly embedded within it. The widespread use of automated smart sensors and an increased variety of georeferenced media resulted in new individual data collectors. This raises a new …

Is A Pretrained Model The Answer To Situational Awareness Detection On Social Media?, Siaw Ling Lo, Kahhe Lee, Yuhao Zhang

Research Collection School Of Computing and Information Systems

Social media can be valuable for extracting information about an event or incident on the ground. However, the vast amount of content shared, and the linguistic variants of languages used on social media make it challenging to identify important situational awareness content to aid in decision-making for first responders. In this study, we assess whether pretrained models can be used to address the aforementioned challenges on social media. Various pretrained models, including static word embedding (such as Word2Vec and GloVe) and contextualized word embedding (such as DistilBERT) are studied in detail. According to our findings, a vanilla DistilBERT pretrained language …

Dual-View Preference Learning For Adaptive Recommendation, Zhongzhou Liu, Yuan Fang, Min Wu

Research Collection School Of Computing and Information Systems

While recommendation systems have been widely deployed, most existing approaches only capture user preferences in the , i.e., the user's general interest across all kinds of items. However, in real-world scenarios, user preferences could vary with items of different natures, which we call the . Both views are crucial for fully personalized recommendation, where an underpinning macro-view governs a multitude of finer-grained preferences in the micro-view. To model the dual views, in this paper, we propose a novel model called Dual-View Adaptive Recommendation (DVAR). In DVAR, we formulate the micro-view based on item categories, and further integrate it with the …

Contextual Path Retrieval: A Contextual Entity Relation Embedding-Based Approach, Pei-Chi Lo, Ee-Peng Lim

Research Collection School Of Computing and Information Systems

Contextual path retrieval (CPR) refers to the task of finding contextual path(s) between a pair of entities in a knowledge graph that explains the connection between them in a given context. For this novel retrieval task, we propose the Embedding-based Contextual Path Retrieval (ECPR) framework. ECPR is based on a three-component structure that includes a context encoder and path encoder that encode query context and path, respectively, and a path ranker that assigns a ranking score to each candidate path to determine the one that should be the contextual path. For context encoding, we propose two novel context encoding methods, …

Dashboard Design Mining And Recommendation, Yanna Lin, Haotian Li, Aoyu Wu, Yong Wang, Huamin Qu

Research Collection School Of Computing and Information Systems

Dashboards, which comprise multiple views on a single display, help analyze and communicate multiple perspectives of data simultaneously. However, creating effective and elegant dashboards is challenging since it requires careful and logical arrangement and coordination of multiple visualizations. To solve the problem, we propose a data-driven approach for mining design rules from dashboards and automating dashboard organization. Specifically, we focus on two prominent aspects of the organization: , which describes the position, size, and layout of each view in the display space; and, which indicates the interaction between pairwise views. We build a new dataset containing 854 dashboards crawled online, …

Learning Large Neighborhood Search For Vehicle Routing In Airport Ground Handling, Jianan Zhou, Yaoxin Wu, Zhiguang Cao, Wen Song, Jie Zhang, Zhenghua Chen

Research Collection School Of Computing and Information Systems

Dispatching vehicle fleets to serve flights is a key task in airport ground handling (AGH). Due to the notable growth of flights, it is challenging to simultaneously schedule multiple types of operations (services) for a large number of flights, where each type of operation is performed by one specific vehicle fleet. To tackle this issue, we first represent the operation scheduling as a complex vehicle routing problem and formulate it as a mixed integer linear programming (MILP) model. Then given the graph representation of the MILP model, we propose a learning assisted large neighborhood search (LNS) method using data generated …

Neighbor-Anchoring Adversarial Graph Neural Networks, Zemin Liu, Yuan Fang, Yong Liu, Vincent W. Zheng

Research Collection School Of Computing and Information Systems

Graph neural networks (GNNs) have witnessed widespread adoption due to their ability to learn superior representations for graph data. While GNNs exhibit strong discriminative power, they often fall short of learning the underlying node distribution for increased robustness. To deal with this, inspired by generative adversarial networks (GANs), we investigate the problem of adversarial learning on graph neural networks, and propose a novel framework named NAGNN (i.e., Neighbor-anchoring Adversarial Graph Neural Networks) for graph representation learning, which trains not only a discriminator but also a generator that compete with each other. In particular, we propose a novel neighbor-anchoring strategy, where …

Reks: Role-Based Encrypted Keyword Search With Enhanced Access Control For Outsourced Cloud Data, Yibin Miao, Feng Li, Xiaohua Jia, Huaxiong Wang, Ximeng Liu, Kim-Kwang Raymond Choo, Robert H. Deng

Research Collection School Of Computing and Information Systems

Keyword-based search over encrypted data is an important technique to achieve both data confidentiality and utilization in cloud outsourcing services. While commonly used access control mechanisms, such as identity-based encryption and attribute-based encryption, do not generally scale well for hierarchical access permissions. To solve this problem, we propose a Role-based Encrypted Keyword Search (REKS) scheme by using the role-based access control and broadcast encryption. Specifically, REKS allows owners to deploy hierarchical access control by allowing users with parent roles to have access permissions from child roles. Using REKS, we further facilitate token generation preprocessing and efficient user management, thereby significantly …

Efficient Approximate Range Aggregation Over Large-Scale Spatial Data Federation, Yexuan Shi, Yongxin Tong, Yuxiang Zeng, Zimu Zhou, Bolin Ding, Lei Chen

Research Collection School Of Computing and Information Systems

Range aggregation is a primitive operation in spatial data applications and there is a growing demand to support such operations over a data federation, where the entire spatial data are separately held by multiple data providers (a.k.a., data silos). Data federations notably increase the amount of data available for data-intensive applications such as smart mobility planning and public health emergency responses. Yet they also challenge the conventional implementation of range aggregation queries because the raw data cannot be shared within the federation and the data partition at each data silo is fixed during query processing. These constraints limit the design …

Champions For Social Good: How Can We Discover Social Sentiment And Attitude-Driven Patterns In Prosocial Communication?, Raghava Rao Mukkamala, Robert J. Kauffman, Helle Zinner Henriksen

Research Collection School Of Computing and Information Systems

The UN High Commissioner on Refugees (UNHCR) is pursuing a social media strategy to inform people about displaced populations and refugee emergencies. It is actively engaging public figures to increase awareness through its prosocial communications and improve social informedness and support for policy changes in its services. We studied the Twitter communications of UNHCR social media champions and investigated their role as high-profile influencers. In this study, we offer a design science research and data analytics framework and propositions based on the social informedness theory we propose in this paper to assess communication about UNHCR’s mission. Two variables—refugee-emergency and champion …

Causal Interventional Training For Image Recognition, Wei Qin, Hanwang Zhang, Richang Hong, Ee-Peng Lim, Qianru Sun

Research Collection School Of Computing and Information Systems

Deep learning models often fit undesired dataset bias in training. In this paper, we formulate the bias using causal inference, which helps us uncover the ever-elusive causalities among the key factors in training, and thus pursue the desired causal effect without the bias. We start from revisiting the process of building a visual recognition system, and then propose a structural causal model (SCM) for the key variables involved in dataset collection and recognition model: object, common sense, bias, context, and label prediction. Based on the SCM, one can observe that there are “good” and “bad” biases. Intuitively, in the image …

Using Materialized Views For Answering Graph Pattern Queries, Michael Lan

Dissertations

Discovering patterns in graphs by evaluating graph pattern queries involving direct (edge-to-edge mapping) and reachability (edge-to-path mapping) relationships under homomorphisms on data graphs has been extensively studied. Previous studies have aimed to reduce the evaluation time of graph pattern queries due to the potentially numerous matches on large data graphs.

In this work, the concept of the summary graph is developed to improve the evaluation of tree pattern queries and graph pattern queries. The summary graph first filters out candidate matches which violate certain reachability constraints, and then finds local matches of query edges. This reduces redundancy in the representation …

Android Security: Analysis And Applications, Raina Samuel

Dissertations

The Android mobile system is home to millions of apps that offer a wide range of functionalities. Users rely on Android apps in various facets of daily life, including critical, e.g., medical, settings. Generally, users trust that apps perform their stated purpose safely and accurately. However, despite the platform’s efforts to maintain a safe environment, apps routinely manage to evade scrutiny. This dissertation analyzes Android app behavior and has revealed several weakness: lapses in device authentication schemes, deceptive practices such as apps covering their traces, as well as behavioral and descriptive inaccuracies in medical apps. Examining a large corpus of …

Machine Learning-Based Data Analytics For Understanding Space Weather And Climate, Yasser Abduallah

Dissertations

This dissertation addresses multiple crucial problems in space weather and climate, presenting new machine learning-based data analytics algorithms and models for tackling the problems.

First, the dissertation presents two new approaches to predicting solar flares. One approach, called DeepSun, predicts solar flares by utilizing a machine-learning-as-a-service (MLaaS) platform. The DeepSun system provides a friendly interface for Web users and an application programming interface (API) for remote programming users. It adopts an ensemble learning method that employs several machine learning algorithms to perform multiclass flare prediction. The other approach, named SolarFlareNet, forecasts the occurrence of solar flares within the next 24 …

Implementation Of Ahp And Black Box Testing To The Development Of An Information System For Assessing The Feasibility Of Bumdes Submissions, Hari Toha Hidayat, Husaini Husaini, Nanang Prihatin, Radhiyatammardhiyyah Radhiyatammardhiyyah

Elinvo (Electronics, Informatics, and Vocational Education)

The existence of institutional village enterprises (BUMDES) has never been adequately monitored in terms of the growth of village-owned businesses in each village. According to the data, there are 17 BUMDES in the Muara District that have been inactive for the most part. Due to the difficulty of monitoring the progress of BUMDES, a significant number of them have become stalled or even inactive. In addition, many BUMDES managers are frequently unprepared to operate the newly opened business. Readiness in terms of the quality of human resources also affects the formation of BUMDES. Consequently, the objective of this study is …

Comparison Of Web 2.0 Use On State University Websites In Indonesia And Top World Universities Related To Webometric Ranking, Handaru Jati

Elinvo (Electronics, Informatics, and Vocational Education)

The present work determines the presence in the web 2.0 that twenty universities had through their educational portals. The universities are selected according to the Webometrics ranking (the ten best located in Indonesia and the best located worldwide) to identify what Web 2.0 tools they use. This study explores the educational portals of the twenty selected universities to determine which Web 2.0 tools they use and variables of the tools found will be assessed. The study only considers those Web 2.0 tools which are linked to the websites of universities. Of the two most used tools, the relevant indicators are …

Big Data Technology Enabling Legal Supervision, Qingjie Liu, Shuo Liu, Yirong Wu, Yueqiang Weng, Yihao Wen, Ming Li

Bulletin of Chinese Academy of Sciences (Chinese Version)

Legal supervision plays an important role in the national governance system and capacity. In the era of digital revolution, the rapid development of digital procuratorial work with big data legal supervision as the core promotes to reshape the legal supervision and governance system. In this study, the inherent need of legal supervision for active prosecution in the new era, and the innovative role of new public interest litigation in comprehensive social governance, are firstly analyzed. Then, the core meaning and reshaping role of big-data-enabling-legalsupervision and supervision-promoting-national-governance of digital prosecution are discussed. After summarizing the practical experiences and challenges of big …

Creating Data From Unstructured Text With Context Rule Assisted Machine Learning (Craml), Stephen Meisenbacher, Peter Norlander

School of Business: Faculty Publications and Other Works

Popular approaches to building data from unstructured text come with limitations, such as scalability, interpretability, replicability, and real-world applicability. These can be overcome with Context Rule Assisted Machine Learning (CRAML), a method and no-code suite of software tools that builds structured, labeled datasets which are accurate and reproducible. CRAML enables domain experts to access uncommon constructs within a document corpus in a low-resource, transparent, and flexible manner. CRAML produces document-level datasets for quantitative research and makes qualitative classification schemes scalable over large volumes of text. We demonstrate that the method is useful for bibliographic analysis, transparent analysis of proprietary data, …

Hybrid Life Cycles In Software Development, Eric Vincent Schoenborn

Masters Projects

This project applied software specification gathering, architecture, work planning, and development to a real-world development effort for a local business. This project began with a feasibility meeting with the owner of Zeal Aerial Fitness. After feasibility was assessed the intended users, needed functionality, and expected user restrictions were identified with the stakeholders. A hybrid software lifecycle was selected to allow a focus on base functionality up front followed by an iterative development of expectations of the stakeholders. I was able to create various specification diagrams that express the end projects goals to both developers and non-tech individuals using a standard …

Travel Dashboard, Naveen Kumar Lalam

Masters Projects

Travel Dashboard is a one stop solution for all the travel needs of travelers and tourists visiting a new place. In today’s world travel has become a part of everyone’s life and we love to travel whenever there is a holiday or long a weekend. Earlier, the travel industry was mostly dictated by tour operators who used to plan and organize tours with standard itinerary, while tourists had very limited choices and needed to pick one of the itineraries given by operator as there was no other option left for them. Time have changed now as travelers love to plan …

Muse: A Genetic Algorithm For Musical Chord Progression Generation, Griffin Going

Masters Projects

Foundational to our understanding and enjoyment of music is the intersection of harmony and movement. This intersection manifests as chord progressions which themselves underscore the rhythm and melody of a piece. In musical compositions, these progressions often follow a set of rules and patterns which are themselves frequently broken for the sake of novelty. In this work, we developed a genetic algorithm which learns these rules and patterns (and how to break them) from a dataset of 890 songs from various periods of the Billboard Top 100 rankings. The algorithm learned to generate increasingly valid, yet interesting chord progressions via …

Building A Deep Model For Multi-Class Coral Species Discrimination, Hyeong Gyu Jang

Masters Projects

The goal of this qualitative research project is to develop and optimize a multi-class discrimination model to identify different species of coral based on their digital images. Currently, there are artificial intelligence (AI) models that can distinguish between coral and other undersea objects such as sand or rocks, but to our knowledge the problem of multi-species classification has not yet been addressed. Given that coral reefs are a good indicator of overall ocean health, it is important to develop models that can classify the presence of different species in underwater images as a way to monitor the effects of climate …

Covid-19 Prediction Using Machine Learning, Parashuram Singaraveni

Masters Projects

All around the globe, humankind faces a disastrous situation that witnessed COVID-19 outbreak. The COVID-19 pandemic caused severe loss of human life across the world. Most of the countries had been socially and economically weakened. The health sector faced lots of challenges in diagnosing the COVID patients, vaccinating the people, identifying the people who are infected by the virus. At the earlier stage, it has been difficult to identify the symptoms in infected person that is caused by the virus. Months later, symptoms were identified and, disease detecting machines were invented. But still, time taking for the results from the …

Big Data Analytics Of Medical Data, Ashwin Rajasankar

Masters Projects

Data has become a huge part of modern decision making. With the improvements in computing performance and storage in the past two decades, storing large amounts of data has become much easier. Analyzing large amounts of data and creating data models with them can help organizations obtain insights and information which helps their decision making. Big data analytics has become an integral part of many fields such as retail, real estate, education, and medicine. In the project, the goal is to understand the working of Apache Spark and its different storage methods and create a data warehouse to analyze data. …

Docker Container Image – Vulnerability Scanning, Joseph U. Ohaeche

Masters Projects

The technology landscape for container adoption has greatly evolved over the years from the first known Unix U7 container concept introduced in 1979 to the most utilized docker container concept which emerged in 2013. Docker container image is essentially a lightweight, standalone executable software package with capabilities to run an application. It is important to know that container images become containers when deployed, and simultaneously docker container images become docker containers when deployed on Docker Engine. This project paper aims, evaluates, and presents a methodology useful in vulnerability scanning of docker container images and suggests possible fixes based on OWASP …

Hybrid Life Cycles In Software Development, Eric Vincent Schoenborn

Masters Projects

This project applied software specification gathering, architecture, work planning, and development to a real-world development effort for a local business. This project began with a feasibility meeting with the owner of Zeal Aerial Fitness. After feasibility was assessed the intended users, needed functionality, and expected user restrictions were identified with the stakeholders. A hybrid software lifecycle was selected to allow a focus on base functionality up front followed by an iterative development of expectations of the stakeholders. I was able to create various specification diagrams that express the end projects goals to both developers and non-tech individuals using a standard …

Exploring Coral Reefs With Interactive Geospatial Visualizations, David Nicolas Tonning

Masters Projects

This project uses geospatial data to generate custom polygons in an interactive setting to represent the size and location of coral reefs to extract insights from coral reef-centered data sets. Historically, the data used by the Reef Restoration Group Bonaire exists in disparate sources, making it difficult to track and analyze the outcomes of their restoration work. Additionally, this information is not available in a digestible format for other audiences who would be interested in this data, such as citizen scientists seeking coral reef health statistics, the general public wanting to better understand the coral reefs surrounding Bonaire or recreational …

Devops: Course Development, James Lee Vanderzouwen

Masters Projects

DevOps has become somewhat of a buzzword amongst software engineers in the industry. Often developers do not have a dedicated DevOps engineer let alone a DevOps team. Developers benefit when they know what happens between ‘works on my machine’ and production. Making sure those steps make sense and are safe benefits the operations team. From compliance to code review to regression testing, understanding the full SDLC, employing DevOps concepts, and minimizing overhead from dependencies is quickly becoming a pre-requisite for the modern software engineer. This project attempts to bridge the gap between buzzword and best practice by developing a college-level …