Computer Sciences Commons^™

Machine Learning Based Protein Sequence To (Un)Structure Mapping And Interaction Prediction, Sumaiya Iqbal

LSU New Orleans Theses and Dissertations

Proteins are the fundamental macromolecules within a cell that carry out most of the biological functions. The computational study of protein structure and its functions, using machine learning and data analytics, is elemental in advancing the life-science research due to the fast-growing biological data and the extensive complexities involved in their analyses towards discovering meaningful insights. Mapping of protein’s primary sequence is not only limited to its structure, we extend that to its disordered component known as Intrinsically Disordered Proteins or Regions in proteins (IDPs/IDRs), and hence the involved dynamics, which help us explain complex interaction within a cell that …

Hybrid Recommender Systems With Deep Learning, Fei Li

LSU Master's Theses

As one of the most popular recommendation algorithms, collaborative filtering (CF) suggests items favored by like-minded based on user ratings. However, CF performs worse for users and items with fewer ratings, which is known as the cold-start problem. On the other hand, the auxiliary information of items such as images and reviews can be helpful for relieving the cold-start issue and improving recommendation accuracy. How to effectively extract features from heterogeneous auxiliary information and integrate them with collaborative filtering remains a big challenge. In this thesis, we propose a tightly-coupled hybrid recommender system named Fusion-MF-Mix via a deep fusion framework, …

Ancr—An Adaptive Network Coding Routing Scheme For Wsns With Different-Success-Rate Links †, Xiang Ji, Anwen Wang, Chunyu Li, Chun Ma, Yao Peng, Dajin Wang, Qingyi Hua, Feng Chen, Dingyi Fang

Department of Computer Science Faculty Scholarship and Creative Works

As the underlying infrastructure of the Internet of Things (IoT), wireless sensor networks (WSNs) have been widely used in many applications. Network coding is a technique in WSNs to combine multiple channels of data in one transmission, wherever possible, to save node’s energy as well as increase the network throughput. So far most works on network coding are based on two assumptions to determine coding opportunities: (1) All the links in the network have the same transmission success rate; (2) Each link is bidirectional, and has the same transmission success rate on both ways. However, these assumptions may not be …

Comparison Of Visual Datasets For Machine Learning, Kent Gauen, Ryan Dailey, John Laiman, Yuxiang Zi, Nirmal Asokan, Yung-Hsiang Lu, George K. Thiruvathukal, Mei-Ling Shyu, Shu-Ching Chen

Computer Science: Faculty Publications and Other Works

One of the greatest technological improvements in recent years is the rapid progress using machine learning for processing visual data. Among all factors that contribute to this development, datasets with labels play crucial roles. Several datasets are widely reused for investigating and analyzing different solutions in machine learning. Many systems, such as autonomous vehicles, rely on components using machine learning for recognizing objects. This paper compares different visual datasets and frameworks for machine learning. The comparison is both qualitative and quantitative and investigates object detection labels with respect to size, location, and contextual information. This paper also presents a new …

Applying Machine Learning To Computational Chemistry: Can We Predict Molecular Properties Faster Without Compromising Accuracy?, Hanjing Xu, Pradeep Gurunathan, Lyudmila Slipchenko

The Summer Undergraduate Research Fellowship (SURF) Symposium

Non-covalent interactions are crucial in analyzing protein folding and structure, function of DNA and RNA, structures of molecular crystals and aggregates, and many other processes in the fields of biology and chemistry. However, it is time and resource consuming to calculate such interactions using quantum-mechanical formulations. Our group has proposed previously that the effective fragment potential (EFP) method could serve as an efficient alternative to solve this problem. However, one of the computational bottlenecks of the EFP method is obtaining parameters for each molecule/fragment in the system, before the actual EFP simulations can be carried out. Here we present a …

Investigating Genetic Algorithm Optimization Techniques In Video Games, Nathan Ambuehl

Undergraduate Honors Theses

Immersion is essential for player experience in video games. Artificial Intelligence serves as an agent that can generate human-like responses and intelligence to reinforce a player’s immersion into their environment. The most common strategy involved in video game AI is using decision trees to guide chosen actions. However, decision trees result in repetitive and robotic actions that reflect an unrealistic interaction. This experiment applies a genetic algorithm that explores selection, crossover, and mutation functions for genetic algorithm implementation in an isolated Super Mario Bros. pathfinding environment. An optimized pathfinding AI can be created by combining an elitist selection strategy with …

Dynamic Adversarial Mining - Effectively Applying Machine Learning In Adversarial Non-Stationary Environments., Tegjyot Singh Sethi

Electronic Theses and Dissertations

While understanding of machine learning and data mining is still in its budding stages, the engineering applications of the same has found immense acceptance and success. Cybersecurity applications such as intrusion detection systems, spam filtering, and CAPTCHA authentication, have all begun adopting machine learning as a viable technique to deal with large scale adversarial activity. However, the naive usage of machine learning in an adversarial setting is prone to reverse engineering and evasion attacks, as most of these techniques were designed primarily for a static setting. The security domain is a dynamic landscape, with an ongoing never ending arms race …

Accurate And Justifiable : New Algorithms For Explainable Recommendations., Behnoush Abdollahi

Electronic Theses and Dissertations

Websites and online services thrive with large amounts of online information, products, and choices, that are available but exceedingly difficult to find and discover. This has prompted two major paradigms to help sift through information: information retrieval and recommender systems. The broad family of information retrieval techniques has given rise to the modern search engines which return relevant results, following a user's explicit query. The broad family of recommender systems, on the other hand, works in a more subtle manner, and do not require an explicit query to provide relevant results. Collaborative Filtering (CF) recommender systems are based on algorithms …

Deepfacade: A Deep Learning Approach To Facade Parsing, Hantang Liu, Jialiang Zhang, Jianke Zhu, Steven C. H. Hoi

Research Collection School Of Computing and Information Systems

The parsing of building facades is a key component to the problem of 3D street scenes reconstruction, which is long desired in computer vision. In this paper, we propose a deep learning based method for segmenting a facade into semantic categories. Man-made structures often present the characteristic of symmetry. Based on this observation, we propose a symmetric regularizer for training the neural network. Our proposed method can make use of both the power of deep neural networks and the structure of man-made architectures. We also propose a method to refine the segmentation results using bounding boxes generated by the Region …

Proactive And Reactive Coordination Of Non-Dedicated Agent Teams Operating In Uncertain Environments, Pritee Agrawal, Pradeep Varakantham

Research Collection School Of Computing and Information Systems

Domains such as disaster rescue, security patrolling etc. often feature dynamic environments where allocations of tasks to agents become ineffective due to unforeseen conditions that may require agents to leave the team. Agents leave the team either due to arrival of high priority tasks (e.g., emergency, accident or violation) or due to some damage to the agent. Existing research in task allocation has only considered fixed number of agents and in some instances arrival of new agents on the team. However, there is little or no literature that considers situations where agents leave the team after task allocation. To that …

Formresnet: Formatted Residual Learning For Image Restoration, Jianbo Jiao, Wei-Chih Tu, Shengfeng He

Research Collection School Of Computing and Information Systems

In this paper, we propose a deep CNN to tackle the image restoration problem by learning the structured residual. Previous deep learning based methods directly learn the mapping from corrupted images to clean images, and may suffer from the gradient exploding/vanishing problems of deep neural networks. We propose to address the image restoration problem by learning the structured details and recovering the latent clean image together, from the shared information between the corrupted image and the latent image. In addition, instead of learning the pure difference (corruption), we propose to add a 'residual formatting layer' to format the residual to …

Learning To Hallucinate Face Images Via Component Generation And Enhancement, Yibing Song, Jiawei Zhang, Shengfeng He, Linchao Bao, Qingxiong Yang

Research Collection School Of Computing and Information Systems

We propose a two-stage method for face hallucination. First, we generate facial components of the input image using CNNs. These components represent the basic facial structures. Second, we synthesize fine-grained facial structures from high resolution training images. The details of these structures are transferred into facial components for enhancement. Therefore, we generate facial components to approximate ground truth global appearance in the first stage and enhance them through recovering details in the second stage. The experiments demonstrate that our method performs favorably against state-of-the-art methods.

Personas For Content Creators Via Decomposed Aggregate Audience Statistics, Jisun An, Haewoon Kwak, Bernard J. Jansen

Research Collection School Of Computing and Information Systems

We propose a novel method for generating personas based on online user data for the increasingly common situation of content creators distributing products via online platforms. We use non-negative matrix factorization to identify user segments and develop personas by adding personality such as names and photos. Our approach can develop accurate personas representing real groups of people using online user data, versus relying on manually gathered data.

Impact Of Artificial Intelligence, Robotics, And Automation On Higher Education, Keng Siau

Research Collection School Of Computing and Information Systems

What is the future of higher education in the AI age? Higher education is expected to be challenged by AI, Robotics, and Automation on multiple fronts. First and foremost, AI, robotics, and automation are replacing and will continue to replace jobs and revolutionalize every nation’s economy and disrupt economic development in the world. Millions of job are expected to be replaced by machines (Zhao & Siau, 2017). Many manufacturing jobs have already been replaced by robots and middle class jobs may be taken over by AI in the near future (Siau & Yang, 2017).The short and long term impact on …

Online Multitask Relative Similarity Learning, Shuji Hao, Peilin Zhao, Yong Liu, Steven C. H. Hoi, Chunyan Miao

Research Collection School Of Computing and Information Systems

Relative similarity learning (RSL) aims to learn similarity functions from data with relative constraints. Most previous algorithms developed for RSL are batch-based learning approaches which suffer from poor scalability when dealing with real world data arriving sequentially. These methods are often designed to learn a single similarity function for a specific task. Therefore, they may be sub-optimal to solve multiple task learning problems. To overcome these limitations, we propose a scalable RSL framework named OMTRSL (Online Multi-Task Relative Similarity Learning). Specifically, we first develop a simple yet effective online learning algorithm for multi-task relative similarity learning. Then, we also propose …

Mechanism Design For Strategic Project Scheduling, Pradeep Varakantham, Na Fu

Research Collection School Of Computing and Information Systems

Organizing large scale projects (e.g., Conferences, IT Shows, F1 race) requires precise scheduling of multiple dependent tasks on common resources where multiple selfish entities are competing to execute the individual tasks. In this paper, we consider a well studied and rich scheduling model referred to as RCPSP (Resource Constrained Project Scheduling Problem). The key change to this model that we consider in this paper is the presence of selfish entities competing to perform individual tasks with the aim of maximizing their own utility. Due to the selfish entities in play, the goal of the scheduling problem is no longer only …

Improving Pattern Recognition And Neural Network Algorithms With Applications To Solar Panel Energy Optimization, Ernesto Zamora Ramos

UNLV Theses, Dissertations, Professional Papers, and Capstones

Artificial Intelligence is a big part of automation and with today's technological advances, artificial intelligence has taken great strides towards positioning itself as the technology of the future to control, enhance and perfect automation. Computer vision includes pattern recognition and classification and machine learning. Computer vision is at the core of decision making and it is a vast and fruitful branch of artificial intelligence. In this work, we expose novel algorithms and techniques built upon existing technologies to improve pattern recognition and neural network training, initially motivated by a multidisciplinary effort to build a robot that helps maintain and optimize …

An Analysis Of The Application Of Simplified Silhouette To The Evaluation Of K-Means Clustering Validity, Fei Wang, Hector-Hugo Franco-Penya, John D. Kelleher, John Pugh, Robert J. Ross

Conference papers

Silhouette is one of the most popular and effective internal measures for the evaluation of clustering validity. Simplified Silhouette is a computationally simplified version of Silhouette. However, to date Simplified Silhouette has not been systematically analysed in a specific clustering algorithm. This paper analyses the application of Simplified Silhouette to the evaluation of k-means clustering validity and compares it with the k-means Cost Function and the original Silhouette from both theoretical and empirical perspectives. The theoretical analysis shows that Simplified Silhouette has a mathematical relationship with both the k-means Cost Function and the original Silhouette, while empirically, we show that …

Motion-Capture-Based Hand Gesture Recognition For Computing And Control, Andrew Gardner

Doctoral Dissertations

This dissertation focuses on the study and development of algorithms that enable the analysis and recognition of hand gestures in a motion capture environment. Central to this work is the study of unlabeled point sets in a more abstract sense. Evaluations of proposed methods focus on examining their generalization to users not encountered during system training.

In an initial exploratory study, we compare various classification algorithms based upon multiple interpretations and feature transformations of point sets, including those based upon aggregate features (e.g. mean) and a pseudo-rasterization of the capture space. We find aggregate feature classifiers to be balanced across …

Speech Based Machine Learning Models For Emotional State Recognition And Ptsd Detection, Debrup Banerjee

Electrical & Computer Engineering Theses & Dissertations

Recognition of emotional state and diagnosis of trauma related illnesses such as posttraumatic stress disorder (PTSD) using speech signals have been active research topics over the past decade. A typical emotion recognition system consists of three components: speech segmentation, feature extraction and emotion identification. Various speech features have been developed for emotional state recognition which can be divided into three categories, namely, excitation, vocal tract and prosodic. However, the capabilities of different feature categories and advanced machine learning techniques have not been fully explored for emotion recognition and PTSD diagnosis. For PTSD assessment, clinical diagnosis through structured interviews is a …

Poster: Unobtrusive User Verification Using Piezoelectric Energy Harvesting, Dong Ma, Guohao Lan, Weitao Xu, Mahbub Hassan, Wen Hu

Research Collection School Of Computing and Information Systems

With the capability to harvest energy from low frequency motions or vibrations, piezoelectric energy harvesting has become a promising solution to achieve self-powered wearable system. Apart from generating energy to power the wearable devices, the output electricity signal of the PEH can also be used as an information source as it reflects the activity or motion patterns of the user. In this paper, we have designed and built an insole-based user authentication system by leveraging the AC voltage generated by the PEH during human walking. Meanwhile, the generated power is also collected and stored, which could be later used as …

Incentivizing The Use Of Bike Trailers For Dynamic Repositioning In Bike Sharing Systems, Supriyo Ghosh, Pradeep Varakantham

Research Collection School Of Computing and Information Systems

Bike Sharing System (BSS) is a green mode of transportation that is employed extensively for short distance travels in major cities of the world. Unfortunately, the users behaviour driven by their personal needs can often result in empty or full base stations, thereby resulting in loss of customer demand. To counter this loss in customer demand, BSS operators typically utilize a fleet of carrier vehicles for repositioning the bikes between stations. However, this fuel burning mode of repositioning incurs a significant amount of routing, labor cost and further increases carbon emissions. Therefore, we propose a potentially self-sustaining and environment friendly …

How Artificial Intelligence Is Impacting Manufacturing Industry, Deepak Srinivasan, Maitreyi Ramesh Swaroop, Balaji Rajaram, Sri Krishan Iyer

Research Collection School Of Computing and Information Systems

In this survey, we study the impact of Artificial Intelligence (AI) on manufacturing sector. AI methods can be utilized to make new thoughts several ways: by delivering novel mixes of wellknown thoughts; by investigating the capability of theoretical spaces; and by making changes that empower the era of unexplored thoughts. AI will have less trouble in displaying the era of new thoughts than in automating their assessment. We describe the advances that have been made on AI in manufacturing industry. We close with how to overcome the issues in this area.

Adviser+: Toward A Usable Web-Based Algorithm Portfolio Deviser, Hoong Chuin Lau, Mustafa Misir, Xiang Li Li, Lingxiao Jiang

Research Collection School Of Computing and Information Systems

The present study offers a more user-friendly and parallelized version of a web-based algorithm portfolio generator, called ADVISER. ADVISER is a portfolio generation tool to deliver a group of configurations for a given set of algorithms targeting a particular problem. The resulting configurations are expected to be diverse such that each can perform well on a certain type of problem instances. One issue with ADVISER is that it performs portfolio generation on a single-core which results in long waiting times for the users. Besides that, it lacks of a reporting system with visualizations to tell more about the generated portfolios. …

A Unified Framework For Vehicle Rerouting And Traffic Light Control To Reduce Traffic Congestion, Zhiguang Cao, Siwei Jiang, Jie Zhang, Hongliang Guo

Research Collection School Of Computing and Information Systems

As the number of vehicles grows rapidly each year, more and more traffic congestion occurs, becoming a big issue for civil engineers in almost all metropolitan cities. In this paper, we propose a novel pheromone-based traffic management framework for reducing traffic congestion, which unifies the strategies of both dynamic vehicle rerouting and traffic light control. Specifically, each vehicle, represented as an agent, deposits digital pheromones over its route, while roadside infrastructure agents collect the pheromones and fuse them to evaluate real-time traffic conditions as well as to predict expected road congestion levels in near future. Once road congestion is predicted, …

Deshadownet: A Multi-Context Embedding Deep Network For Shadow Removal, Liangqiong Qu, Jiandong Tian, Shengfeng He, Yandong Tang, Rynson W. H. Lau

Research Collection School Of Computing and Information Systems

Shadow removal is a challenging task as it requires the detection/annotation of shadows as well as semantic understanding of the scene. In this paper, we propose an automatic and end-to-end deep neural network (DeshadowNet) to tackle these problems in a unified manner. DeshadowNet is designed with a multi-context architecture, where the output shadow matte is predicted by embedding information from three different perspectives. The first global network extracts shadow features from a global view. Two levels of features are derived from the global network and transferred to two parallel networks. While one extracts the appearance of the input image, the …

Question Type Recognition Using Natural Language Input, Aishwarya Soni

Master's Projects

Recently, numerous specialists are concentrating on the utilization of Natural Language Processing (NLP) systems in various domains, for example, data extraction and content mining. One of the difficulties with these innovations is building up a precise Question and Answering (QA) System. Question type recognition is the most significant task in a QA system, for example, chat bots. Organization such as National Institute of Standards (NIST) hosts a conference series called as Text REtrieval Conference (TREC) series which keeps a competition every year to encourage and improve the technique of information retrieval from a large corpus of text. When a user …

Improving Text Classification With Word Embedding, Lihao Ge

Master's Projects

One challenge in text classification is that it is hard to make feature reduction basing upon the meaning of the features. An improper feature reduction may even worsen the classification accuracy. Word2Vec, a word embedding method, has recently been gaining popularity due to its high precision rate of analyzing the semantic similarity between words at relatively low computational cost. However, there are only a limited number of researchers focusing on feature reduction using Word2Vec. In this project, we developed a Word2Vec based method to reduce the feature size while increasing the classification accuracy. The feature reduction is achieved by loosely …

Estimation Of Train Driver Workload: Extracting Taskload Measures From On-Train-Data-Recorders, Nora Balfe, Katie Crowley, Brendan Smith, Luca Longo

Conference papers

This paper presents a method to extract train driver taskload from downloads of on-train-data-recorders (OTDR). OTDR are in widespread use for the purposes of condition monitoring of trains, but they may also have applications in operations monitoring and management. Evaluation of train driver workload is one such application. The paper describes the type of data held in OTDR recordings and how they can be transformed into driver actions throughout a journey. Example data from 16 commuter journeys are presented, which highlights the increased taskload during arrival at stations. Finally, the possibilities and limitations of the data are discussed.

Solving Algorithmic Problems In Finitely Presented Groups Via Machine Learning, Jonathan Gryak

Dissertations, Theses, and Capstone Projects

Machine learning and pattern recognition techniques have been successfully applied to algorithmic problems in free groups. In this dissertation, we seek to extend these techniques to finitely presented non-free groups, in particular to polycyclic and metabelian groups that are of interest to non-commutative cryptography.

As a prototypical example, we utilize supervised learning methods to construct classifiers that can solve the conjugacy decision problem, i.e., determine whether or not a pair of elements from a specified group are conjugate. The accuracies of classifiers created using decision trees, random forests, and N-tuple neural network models are evaluated for several non-free groups. …