Chemistry Commons^™

Electrochemical Gelation Of Metal Chalcogenide Quantum Dots, Chathuranga Chinthana Hewa Rahinduwage

Wayne State University Dissertations

Quantum dots (QDs) are attractive because of their unique size-dependent optical and electronic properties and high surface area. They are tested in research for diverse applications, including energy conversion, catalysis, and sensing. Assembling QDs into functional solid-state devices while preserving their attractive properties is a challenge. Methods currently under the research are not effective in directly fabricating QDs onto devices, making large area assemblies, maintaining the high surface area by forming 3D porous structures, and conducting electricity for applications such as sensing. QD gels are an example of QD assemblies that consist of a 3D porous interconnected QD network. They …

Extending Plasma Proteome Coverage To Enable Biomarker Discovery, Jordan Bruce Burton

Wayne State University Dissertations

Two features make plasma a valued source of health information: First, plasma contains secreted proteins from all tissues in the body and can, therefore, provide information about the health status of all tissues. Second, plasma is available in large quantity using a minimally invasive procedure that is well tolerated. The status of plasma as a valued source of health information is matched by the difficulty in extracting proteome information from the samples. Using state of the art instrumentation a standard analysis of plasma yields quantitative information on approximately 300 proteins. Extreme fractionation strategies coupled with increased mass spectrometry time extends …

The Effect Of Autophagy Related Protein 10 And Its Mutants On Autophagic Activity, Sk Nadia Rahman Silvia

Senior Honors Theses and Projects

Autophagy is the cellular degradation process in which cellular contents are encapsulated by double-membrane vesicles, autophagosomes, and delivered to the vacuole to be degraded and recycled. This process is important for cell health and homeostasis. There are approximately 32 different autophagy-related proteins involved. Atg10 is an enzyme that may affect overall autophagic activity by changing autophagosome size and/or number. Our goal is to find mutants that cause a significant, partial loss in Atg10’s activity by mutating some residues near the active site and testing the functionality of these mutants by performing western blots and enzymatic assays. Here we show that …

Introducing An H113a Mutation Into Atg10 Y73q To Reduce Autophagic Activity And Understand The Effect Of Atg On Autophagosome Size And Number, Konrad L. Lautenschlager

Senior Honors Theses and Projects

Autophagy is an essential recycling process that occurs within eukaryotic cells, however, the individual functions of the current thirty-two known autophagic proteins are not yet entirely understood. At this time, it is known that the autophagic protein Atg7 works upstream of both Atg3 and Atg10. Atg3 is affected by Atg7 and allows for the attachment of Atg8 and the lipid PE which is part of the autophagosome membrane. The Atg10 pathway is also affected by Atg7 but attaches Atg12 to Atg5 which upregulates the function of Atg3 and ultimately Atg8 lipidation. These protein interactions are necessary for forming autophagosomes, large …

Photophysical, Electrochemical, And Catalytic Studies Of Anthraquinone And Pyridoxyl-Based Sensors And Development Of Ruthenium Photosensitizers, Anwar Hussain

Dissertations and Theses

In the past, we have demonstrated the photophysical properties of several anthraquinone derivatives that act as a luminescent host for various environmental and biological cations. Here we extend our expertise in photochemistry to the class of chemicals containing the pyridoxal moiety. Several ligands were synthesized using eco-friendly, simple, one-step reactions via Schiff base and condensation reactions. The optical properties of these ligands were examined with a series of cations. We demonstrated the ability to detect the biologically important zinc ion in living cells such as RAW 264.7 and HEK 293 via fluorescence signaling. In addition, we extend our explorations to …

Chromatographic Studies Of Some Hormone And Metabolic Modulators Used For Doping In Sports, Ruth Marie Speidel

Online Theses and Dissertations

The World Anti-Doping Agency (WADA) is an international agency that monitors the use of Performance Enhancing Drugs (PEDs) in sports; their mission is “to lead a collaborative worldwide movement for doping-free sport” (Who We Are, 2022). For this mission, the WADA needs quick, sensitive, reproducible, and accurate methods for analyzing athletes’ biological fluids for possible PEDs. This research focuses on developing and validating simple, sensitive, rapid, and reliable gas chromatography- mass spectrometry (GC-MS) methods for the analysis of two hormone and metabolic modulators, toremifene and trimetazidine. Previously, there has been limited GC-MS methods used to analyze toremifene and trimetazidine. Quantification …

Establishing A Biochemical System For The Purification And Atpase Activity Of Gst-Dbp5, Sarah R. Utley, Rachel E. Rigsby Phd, Rebecca L. Adams Phd

Science University Research Symposium (SURS)

The export of mRNA out of the nucleus is a crucial step for eukaryotic gene expression. The export of mRNA transcripts is aided by Mex67, which allows export through the nuclear pore complex doorways in the nuclear envelope. Once out of the nucleus, a protein known as Dbp5, bound to ATP, Gle1, and Nup42 aids in the directionality of mRNA export by helping remove Mex67 from the mRNA strand. Following interaction with RNA, Dbp5 then hydrolyzes ATP so that it unbinds the mRNA, allowing for enzyme recycling. Previous efforts worked towards the purification of Dbp5, but the attempts were unsuccessful …

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A Novel Series Of Putative Brugia Malayi Histone Demethylase Inhibitors As Potential Anti-Filarial Drugs, Tamara Kreiss, Tyler Eck, Brittany Hart, Sreedhar Tummalapalli, David Rotella, John Siekierka

Department of Chemistry and Biochemistry Faculty Scholarship and Creative Works

Filariasis, caused by a family of parasitic nematodes, affects millions of individuals through-out the tropics and is a major cause of acute and chronic morbidity. Current drugs are largely used in mass drug administration programs aimed at controlling the spread of disease by killing microfilariae, larval forms of the parasite responsible for transmission from humans to humans through insect vectors with limited efficacy against adult parasites. Although these drugs are effective, in some cases there are toxic liabilities. In case of loiasis which is caused by the parasitic eyeworm Loa loa, mass drug administration is contraindicative due to severe side …

Detection And Identification Of Prevalent Cutting Agents In 'Street' Samples Utilizing Handheld And Benchtop Raman Spectroscopy And Surface-Enhanced Raman Spectroscopy (Sers), Nicole Kenny

Browse all Theses and Dissertations

Illicit and licit drugs continue to have a negative impact on the public’s health even with new regulations and laws. At local, state, and federal levels, crime laboratories analyze samples in a variety of mixtures and concentrations. Raman spectroscopy is a molecular fingerprinting, multiplex technique, which is considered a category A forensic characterization tool by the Scientific Working Group for the Analysis of Seized Drugs (SWGDRUG). The sensitivity of the Raman technique can be further enhanced down to the single-molecule detection level when analytes of interest are located at the interstitial sites of aggregated silver nanoparticles (i.e., the “hot spots” …

Indoor Air Quality Through The Lens Of Outdoor Atmospheric Chemistry, Jonathan P.D. Abbatt, Douglas B. Collins

Faculty Contributions to Books

Outdoor atmospheric chemistry and air quality have been the topic of research that intensified in earnest around the mid-20^th century, while indoor air quality research has only been a key focus of chemical researchers over the last 30 years. Examining practices and approaches employed in the outdoor atmospheric chemistry research enterprise provides an additional viewpoint from which we can chart new paths to increase scientific understanding of indoor chemistry. This chapter explores our understanding of primary chemical sources, homogeneous and multiphase reactivity, gas-surface partitioning, and the coupling between the chemistry and dynamics of indoor air through the lens of …

Tuning The Fluid Wetting Dynamics On Gold Microstructures And Conductivity Of Polyaniline Using Photoactive Compounds, Ali Haghighat Mesbahi

Electronic Theses and Dissertations, 2020-2023

Organic photochromic compounds (OPCs) are considered as a class of light sensitive compounds that undergo reversible structural transformation of their physicochemical properties (i.e., polarity and charge distribution) upon light irradiation as an external stimulus. These compounds have been extensively studied for decades, and are used in various applications such as biomedicine, chemical sensors and harvesting solar energy. In this thesis, applications of OPCs were investigated under two different projects: 1) controlling wettability of flat and microstructured gold surfaces and 2) controlling the electrical conductivity of polyaniline. The first project demonstrates how photoactive compounds can be used to tune the surface …

Bond Valence Sum Analysis On Compounds Prepared By Topochemical Manipulation, Yasmin Dayeh

All Capstone Projects

The Bond Valence theory of Brown (1978) has been extensively used to correlate metal oxidation state to coordination environment in solids. Although the bond valence sum (BVS) appears to be extremely useful to coordination chemists, it has not often been applied as an alternative measure of refinement quality. In this work, previously reported six layered perovskite compounds including, RbLaNb2O7, Rb2LaNb2O7, Rb2SxLaNb2O7 (x ≤ 0.8), NaLaNb2O7, (Cs2Cl)LaNb2O7, and (FeCl)LaNb2O7, that have been prepared by topochemical manipulation and their structures have been determined by Rietveld refinements were analyzed. Our focus was to explore whether the determination of oxidation state using the bond …

Characterization Of Functionalized Carbon Nanotubes And Polystyrene/Cnt Composites Prepared With Microwave-Induced Polymerization, Allen Hulette

College of Graduate Studies: Theses & Dissertations

The use of carbon nanotubes in polymer composites can increase the mechanical properties of the resulting product. Carbon nanotubes are known to have chemical interactions that make them attracted to one another and fall out of solution. To reduce this agglomeration and disperse the mechanical properties throughout the composite, functional groups are covalently added to the carbon nanotubes. Another known property of carbon nanotubes is their ability to absorb microwaves and convert it into other forms of energy. This research investigates the effects of carbon nanotube absorption of microwaves and initiation of styrene monomer polymerization. Grignard reactions are used to …

Synthesis And Characterization Of Multimetallic Clusters Featuring Iron, Cobalt, And 2,6-Bis(Trialkylsilylamino)Pyridines, Lynn Nguyen

College of Graduate Studies: Theses & Dissertations

Extended metal atom chain (EMAC) complexes are multimetallic complexes of three or more metals, often containing M-M bonds, with the metal ions arranged linearly. These complexes have significant potential as molecular wires. They can elicit unique physical properties and reactivities, sometimes a result of direct magnetic exchange between metal centers, especially when incorporating first row transition metals. The synthesis of the first linear, triiron (II) complex with 2,6-bis[(trimethylsilyl)amino]pyridine (H₂L^Me) featuring Fe-Fe bonding from our group, Fe₃L^Me₃, motivated the expansion of linear multimetallic EMAC complexes with Fe and Co, incorporating M-M bonds. …

Molybdenum Oxide/Antimony Nanobelts Embedded In Asymmetric Membranes For Use As High-Capacity Lithium/Sodium-Ion Battery Anodes, Logan Williams

College of Graduate Studies: Theses & Dissertations

Lithium-ion batteries (LIB) are a key aspect of our daily lives, from smartphones to electric vehicles. Commercially available LIB use graphite anodes due to their reliability and safety. Graphite anodes present one key disadvantage: a relatively low theoretical capacity of 372 mAh g-1. It is of great importance that new research focuses on high-capacity anode materials to further our sustainability and usage of LIB. While increasing the performance of LIB is of great interest, developing alternative energy storage devices is gaining attention in academia and industry R&D. Sodium has become a topic of interest in recent years due to sodium’s …

Biomimetic Synthesis Of Palladium Nanoparticles For Catalytic Application, Emily A. Groover

College of Graduate Studies: Theses & Dissertations

The synthesis of palladium nanoparticles (Pd NPs) using materials-directed peptides is a novel, nontoxic approach which exerts a high level of control over the particle size and shape. This biomimetic technique is environmentally benign, featuring nonhazardous ligands and ambient conditions. Nanoparticles are extremely reactive catalysts, boasting a large surface-to-volume ratio when compared to their bulk counterparts. The rational design of these nanoparticles using peptides has been very successful in aqueous environments, but no research has been done to apply it in organic systems. As such, the biomimetic synthesis of Pd NPs in an organic system is here investigated, with ethanol …

Magnetoexcitons In Phosphorene Monolayers, Bilayers, And Van Der Waals Heterostructures, Roman Ya. Kezerashvili, Anastasia Spiridonova, Andrew Dublin

Publications and Research

We study direct and indirect excitons in Rydberg states in phosphorene monolayers, bilayers, and van der Waals (vdW) heterostructure in an external magnetic field within the framework of the effective-mass approximation. The magnetic field is applied perpendicular to the monolayer or heterostructure and is varied between 0 and 60 T. Binding energies of magnetoexcitons are calculated by numerical integration of the Schrödinger equation using the Rytova-Keldysh potential for direct magnetoexcitons and both the Rytova-Keldysh and Coulomb potentials for indirect magnetoexcitons. The latter aids in the understanding of the role of screening in phosphorene. We report the magnetic field energy contribution …

Synthesis Of Functional Chalcone Library For Use In Aza- Dipyrromethene Dye Systems, Kendal Crawley

Murray State Theses and Dissertations

Over the past decade, Aza-Bodipy dyes (ADPs), a derivative of the extensively studied BF₂-dipyrromethene (BODIPY), have become a growing field of research due to their unique photophysical properties, high yielding synthesis, and relative stability. They possess a unique spectral window of 600 to 750 nm which is the red to near-IR region, evidenced by the blue color of many of these dyes. Increasing interest in these dyes is due to this near-IR window which is important for many applications.^1-4 ADP chromophores also have a common core motif to that of phthalocyanines which allow for coordination at their …

Development Of An Hipsc-Cortical Neuron Long-Term Potentiation Model And Its Application To Alzheimer's Disease Modeling And Drug Evaluation, Kaveena Autar

Electronic Theses and Dissertations, 2020-2023

Alzheimer's disease (AD) is commonly characterized by a loss of cognitive function due to the deterioration of neuronal synapses from the presence of senile amyloid beta-42 (Aß42) plaques. Evaluating cognitive deficits caused by Aß42 using human cortical neurons poses a challenge due to sourcing difficulties, and the use of animal models to assess drug efficacy creates biological hurdles from lack of species translatability. Recent advances in induced-pluripotent stem cell technology have enabled the development of mature, human-based cortical neuron models. The development of an hiPSC-cortical neuron differentiation protocol facilitates the exploration of disease onset and functional analysis from a patient-derived …

Development Of A Computational Application To Aid With Chemometric And Forensic Analysis Of Fire Debris Samples, Michelle Corbally

Electronic Theses and Dissertations, 2020-2023

Fire debris analysis is a forensic science discipline that determines if an ignitable liquid residue is present or absent in a fire debris sample. Currently, fire debris analysis results in categorical statements based on qualitative data, not the quantitative evidentiary value of data. The purpose of this research was to develop a novel software application to aid fire debris analysts in the identification and classification of ignitable liquid residues that are found in fire debris samples. The developed application uses target factor analysis (TFA) and Pearson correlation for compound identification in gas chromatograms using mass spectral comparison and allows for …

Reticular Design And Synthesis Of Metal-Organic Frameworks With Targeted Emergent Properties, David Fairchild

Electronic Theses and Dissertations, 2020-2023

The research presented in this dissertation describes the design and synthesis of substitutional-solid-solution-based multivariate metal-organic frameworks (SSS-based MTV MOFs) with functionalized organic linkers to study their emergent properties in the crystalline solid state. The synthetic versatility and tunability of organic chemistry coupled with the predictable organization of inorganic structures enables MTV MOF systems to further the fundamental understanding of structure-composition-property relationships for the targeted design of applied materials due to their ability to control the structure, composition, and property independently. To begin, a set of terphenyl linkers with varied steric and electronic properties were crystallized as a family of UiO-type …

Polymer Derived Ceramic For Lithium-Ion Storage, And Electrospun Polyelectrolyte Fiber For Heavy Metal Ions Removal, Zeyang Zhang

Electronic Theses and Dissertations, 2020-2023

This dissertation includes two major projects. The first project investigated the great potential of polymer-derived ceramics (PDCs) as lithium-ion battery anode materials with good cycling stability and large capacity. SiCNO ceramic nanoparticles were produced by pyrolysis of polysilazane nanoparticles synthesized via an oil-in-oil emulsion crosslinking. The SiCNO nanoparticles had an average particle size of around 9 nm and contained graphitic carbon, Si3N4, and SiO2 domains. The electrochemical behavior of SiCNO nanoparticles anode was investigated to evaluate the Li-ion storage performance and understand its mechanism of Li-ion storage. The lithiation of SiCNO was observed at ~0.385 V versus Li/Li+. The anode …

Qualitative Analysis Of Agarwood Oil By Two-Dimensional Thin Layer Chromatography, Phawida Yodthongchai

Chulalongkorn University Theses and Dissertations (Chula ETD)

A comprehensive two-dimensional thin layer chromatography (2D-TLC) has been developed for the separation of agarwood oil. The system employed a single stationary phase of silica gel 60 and two different mobile phases from the set of 9:1 (v/v) hexane/ethyl acetate, 1:1 (v/v) hexane/dichloromethane, dichloromethane, and acetonitrile. The best mobile phase system was found to be dichloromethane and 9:1 (v/v) hexane/ethyl acetate in the first and second dimensional separations, respectively. This showed the greater separation results with the orthogonality (A0) of 0.6636 based on the asterisk approximation which separated 14 spots of the agarwood sample compared with 9 spots separated by …

Catalytic Hydrotreating Of Palm Oil Over Ni/Mesoporous Zeolite For Bio-Jet Fuel Production, Nipitpon Panarmasar

Chulalongkorn University Theses and Dissertations (Chula ETD)

The production of bio-jet fuel from palm oil using different types of Ni/mesoporous zeolite. The conventional zeolites were modified into mesoporous zeolites by desilication with NaOH and micro-mesoporous post-synthesis method with SBA-15. Supported Ni-catalysts on zeolites were prepared using a wet impregnation method with a 10 wt% Ni loading. The experiments were conducted in a continuous-flow fixed-bed reactor. The reaction temperature significantly influenced palm oil conversion and the selectivity of jet-fuel range products. The Ni/USY exhibited the highest liquid and jet range selectivity at a temperature of 425°C and a pressure of 25 bar. Furthermore, the modified-support catalyst, 10 wt% …

Analyzing The Free Energy Of Ions Sampling A Voltage Gated Sodium Ion Channel, Isabel Varghese

Honors Theses

Voltage gated sodium ion channels are implicated in cardiac diseases, seizures, etc., and they play a role in maintaining ionic homeostasis in cells. Computational studies use prokaryotic model because they are simpler but function similarly to human voltage gated sodium ion channels. This study uses molecular dynamics (MD) to study three specific questions regarding voltage gated sodium ion channels of Magnetococcus marinus. The first question in this study is how the free energy of sodium diffusion compares to that of calcium ion diffusion. We were not able to find any physically significant information due to poor sampling and a lack …

Insights Into The Deglacial Variability Of Phytoplankton Community Structure In The Eastern Equatorial Pacific Ocean Using [231Pa/230Th]Xs And Opal-Carbonate Fluxes, Danielle Schimmenti, Franco Marcantonio, Christopher T. Hayes, Jennifer Hertzberg, Matthew Schmidt, John Sarao

OES Faculty Publications

Fully and accurately reconstructing changes in oceanic productivity and carbon export and their controls is critical to determining the efficiency of the biological pump and its role in the global carbon cycle through time, particularly in modern CO₂ source regions like the eastern equatorial Pacific (EEP). Here we present new high-resolution records of sedimentary ²³⁰Th-normalized opal and nannofossil carbonate fluxes and [²³¹Pa/²³⁰Th]xs ratios from site MV1014-02-17JC in the Panama Basin. We find that, across the last deglaciation, phytoplankton community structure is driven by changing patterns of nutrient (nitrate, iron, and silica) availability which, in …

Calcification, Dissolution And Test Properties Of Modern Planktonic Foraminifera From The Central Atlantic Ocean, Stergios D. Zarkogiannis, Shinya Iwasaki, James William Buchanan Rae, Matthew W. Schmidt, P. Graham Mortyn, George Kontakiotis, Jennifer E. Hertzberg, Rosalind E.M. Rickaby

OES Faculty Publications

The mass of well-preserved calcite in planktonic foraminifera shells provides an indication of the calcification potential of the surface ocean. Here we report the shell weight of 8 different abundant planktonic foraminifera species from a set of core-top sediments along the Mid-Atlantic Ridge. The analyses showed that near the equator, foraminifera shells of equivalent size weigh on average 1/3 less than those from the middle latitudes. The carbonate preservation state of the samples was assessed by high resolution X-ray microcomputed tomographic analyses of Globigerinoides ruber and Globorotalia truncatulinoides specimens. The specimen preservation was deemed good and does not overall explain …

3d Printable Polymer Electrolyte Hydrogel For Zinc-Ion Battery, Nantachporn Jirawatanaporn

Chulalongkorn University Theses and Dissertations (Chula ETD)

The increasing use of electronic wearable devices for diverse applications leads to demand for new energy storage, especially flexibility and wearable design. Zinc-ion batteries (ZIBs) are significant potential energy storage for such applications. However, the lack of stable and durable electrolytes for flexible ZIBs significantly limits their applications. Gel polymer electrolytes can challenge these limitations; however, it offers low ionic conductivity compared to conventional liquid electrolytes. Increasing porosity is one of the proposing approaches to improve the ion mobility interconnects pathway. The 3D printing process is a versatile technology that can be applied to gel-like polymers. This research aims to …

Hydrogen Production By Steam Reforming Of Bioethanol And Fusel Oil Over Ni/Zsm-5 Nanosheet And Ni/Sic, Porapak Suriya

Chulalongkorn University Theses and Dissertations (Chula ETD)

In this research, hydrogen production is performed by steam reforming of bio-alcohol over Ni-based catalysts. First section of the study, Ni/SiC catalyst was synthesized and used in steam reforming of fusel oil (FSR). The SiC support was prepared by pyrolysis of rice husk at 1500 °C to obtain β-SiC phase, which benefit to reduce the carbon formation due to its good thermal conductivity and durability. The Ni/SiC1500 indicated 90% of fusel oil gas conversion and 29% of hydrogen yield during a 300 min of steam reforming of fusel oil at 700 °C, hence presenting a good performance, and remaining stable …