Chemistry Commons^™

Removal Of Arsenic Using Iron Coated Limestone, Anitha Swarna

Masters Theses & Specialist Projects

Arsenic contamination in drinking water is a severe problem worldwide. The best way to prevent hazardous diseases from chronic arsenic exposure is to remove the exposure. Efforts to remediate arsenic in drinking water have taken two tracks. One is to provide surface or shallow well water sources as an alternative to the arsenic contaminated deep wells. Another approach is to remove arsenic from the contaminated water. Different removal technologies like oxidation, chemical coagulation, precipitation, adsorption and others are available. There are problems and benefits associated with each of these approaches that can be related to cultural, socio-economic and engineering influences. …

Investigation Of The Addition Of Basalt Fibres Into Cement, Jahi Palme

Masters Theses & Specialist Projects

Mechanical properties of concrete are most commonly determined using destructive tests including: compression, flexure, and fracture notch specimen tests. However, nondestructive tests exist for evaluating the properties of concrete such as ultrasonic pulse velocity and impact echo tests. One of major issues with concrete (which has cement as its prime ingredient) is that unlike steel it is quasi-brittle material. It tends to want to crack when tensile stresses develop. Fibres have been added to concrete for many years to reduce the amount of and size of cracks cause by temperature changes or shrinkage. In more recent years, significant research has …

Synthesis Of Perylenediimide-Functionalized Silsesquioxane Nanostructures, Lan Xu

Masters Theses & Specialist Projects

Organic semiconductors functionalized nanostructures are becoming as promising materials for electronic device applications including organic photovoltaics (OPVs). Perylenediimide (PDI) derivatives have also been known as one of the best n-type organic semiconductors. PDI derivatives can form bulk materials, which are both photochemically and thermally stable and have been widely used in various optoelectronic devices. Due to the formation of high electron mobility of crystalline domains, they prefer to incorporate into a silsesquioxane network. Here, we describe the potential applicability of perylenediimide functionalized silsesquioxane nanoribbons (PDI-dimethyl nanoribbons) as an acceptor for optoelectronic devices. We have developed synthetic procedures to make the …

Laboratory Scale Study Of Calcium Sulfate Hydration Forms, Sandeep Kumar Kuthadi

Masters Theses & Specialist Projects

This research is part of an ongoing project to create gypsum wallboards with enhanced fire resistance. The main goal of this research is to better understand the dehydration properties of calcium sulfate dihydrate, and the hydration of calcium sulfate hemihydrate as well as anhydrous calcium sulfate. The lab-scale kinetics of these processes were studied using thermogravimetric analysis and sorption analysis. Scanning electron microscopy (SEM) and X-ray diffraction (XRD) were used to characterize the products from different processes. In addition to the instrumental studies, small batches were handled in ovens and liquid slurries to better mimic the real world processing of …

Syntheses And Characterizations Of 4-Cyano-3-Tolylpyrazole And Its Metal Complexes, Molly M. Ketron

Undergraduate Honors Theses

Research on substituted polypyrazolylborate ligands could potentially lead to the development of useful compounds in the material sciences such as catalysis and metal ion extraction. A wide variety of substituents can be introduced to the pyrazole rings that modify the properties and reactivity of the complexes. Synthesis of 4-cyano-3-tolylpyrazole followed by the formation of a corresponding thallium(I) complex could allow one to examine the Tl-N bond length. When compared with other related complexes such as TlBp^{t-Bu, 4CN} and TlBp^{Ph, 4CN}, the Tl-N bond length in the synthesized complex will help determine the effect of the new …

The Analysis Of The Decomposition Of Hydrogen Peroxide Using A Schiff Base Copper Complex By Cyclic Voltammetry, Gavin James Rustin Mr.

Undergraduate Honors Theses

Copper(II) complexes of Schiff bases can be used in the catalysis of hydrogen peroxide to create water and oxygen. The mechanism and the kinetics of this disproportionation reaction by a dimeric copper(II) complex [CuSALAD]₂ are studied in this experiment, where SALAD refers to a Schiff Base ligand formed from salicyaldehyde and 1S,2S-D(+)-1-phenyl-2-amino-1,3-propanediol. By using cyclic voltammetry, the oxidation-reduction processes of a reaction may be monitored. The [CuSALAD]­₂ is initially reacted with a base such as imidazole to form the catalytic species, and the ratio of the copper(II) complex to the imidazole was found to be 1:4, consistent with …

Selective Oxidations By Metalloporphyrins And Metallocorroles, Tse-Hong Chen

Masters Theses & Specialist Projects

Highly reactive transition metal-oxo intermediates are important active oxidant involved in numerous enzymes such as cytochrome P450 monooxygenases as well as in many useful metal-catalyzed oxidations. Many transition metal catalysts are designed for biomimetic studies of the predominant oxidation catalysts in Nature, the cytochrome P450 enzymes. In this work, a series of metalloporphyrin and metallocorrole complexes have been successfully synthesized and spectroscopically characterized by UV-vis, GCMS and ¹H-NMR. The utilization of these complexes as catalysts for selective oxidation of sulfides and photocatalytic aerobic oxidations of activated hydrocarbons were investigated. Ruthenium(II) porphyrin complexes (2) and iron(III) corrole complexes (4) with …

Thermal Analysis Of Binding Of Organic Pollutants To Titanium Dioxide, Shashidhar Annarapu

Masters Theses & Specialist Projects

Conventional waste water treatment processes are not completely effective in removing highly stable organic compounds. Photocatalytic degradation on titanium dioxide is a possible alternative technique for many classes of these compounds. Several studies have been done by other researchers to study mechanisms of photocatalytic degradation, which occurs either through direct oxidation by holes or via indirect oxidation by radical messengers. Titanium dioxide can oxidize substrates directly through hole oxidation mechanisms or indirectly through free radical mechanisms. Substrates must bind onto the catalyst surface to undergo direct oxidation by holes. Thermogravimetric analysis (TGA) was performed on four different classes of compounds; …

Spontaneous Transfer Of Chirality In An Atropisomerically Enriched Two-Axis System, K. T. Barrett, A. J. Metrano, Paul R. Rablen, S. J. Miller

Chemistry & Biochemistry Faculty Works

One of the most well-recognized stereogenic elements in a chiral molecule is an sp(3)-hybridized carbon atom that is connected to four different substituents. Axes of chirality can also exist about bonds with hindered barriers of rotation; molecules containing such axes are known as atropisomers(1). Understanding the dynamics of these systems can be useful, for example, in the design of single-atropisomer drugs(2) or molecular switches and motors(3). For molecules that exhibit a single axis of chirality, rotation about that axis leads to racemization as the system reaches equilibrium. Here we report a two-axis system for which an enantioselective reaction produces four …

Determination Of Pore Size Distribution In Capillary-Channeled Polymer (C-Cp) Fiber Stationary Phases By Inverse Size-Exclusion Chromatography (Isec) And The Study Of The Role Of Interstitial Fraction On C-Cp Fibers On Protein Binding Capacity, Zhengxin Wang

All Theses

ABSTRACT High performance liquid chromatography (HPLC), first used in the 1960's, is a rapidly evolving analytical technique, widely employed for identification, separation, and purification in biotechnology and pharmaceutical industries. The development of the stationary phases has played an important role in improving this technique. Each stationary phase will have its own disadvantages. Polysaccharide-based stationary phases such as cross-linked dextran cannot tolerate high pressures and linear velocities; silica stationary phases are rigid enough but slow mass transfer in the pores on the surface causes another problem; with the introduction of non-porous and small bead packing materials, the low surface area and …

Cloning And Characterization Of Ef-Tu And Ef-Ts From Streptococcus Pneumoniae, Carlos Eduardo Rivera

Theses and Dissertations - UTB/UTPA

Antibiotic resistance is a prevalent threat to public health around the world, and resistance among strains of Streptococcus pneumoniae is growing rapidly. This increasing resistance elevates the demand for new drug discoveries. This research attempts to develop a means to combat S. pneumoniae by targeting protein synthesis for the discovery of new antibacterial agents. Protein synthesis components, elongation factor Tu (EF-Tu) and elongation factor Ts (EF-Ts) facilitate many steps in the biosynthesis of proteins and are therefore essential proteins involved in protein synthesis. EF-Tu and EF-Ts were cloned, expressed, purified, and enzymatically characterized to help develop a screening system that …

Assessing College Students' Understanding Of Acid Base Chemistry Concepts, Yanjun Wan

All Dissertations

Typically most college curricula include three acid base models: Arrhenius', Bronsted-Lowry's, and Lewis'. Although Lewis' acid base model is generally thought to be the most sophisticated among these three models, and can be further applied in reaction mechanisms, most general chemistry curricula either do not include Lewis' acid base model, or quickly mention it at the end of the acid base chapter, because of the concern that Lewis' model may confuse general chemistry students (Shaffer 2006). While such a disconnection in curriculum might put students to disadvantage as they try to construct solid and coherent acid base mental models, there …

Elucidation Of The Substrate Recognition Mechanism Of Vccry1, Rohe Ahmad

Theses, Dissertations and Culminating Projects

Vibrio cholerae cryptochrome 1 (VcCryl), a DNA repair enzyme, uses a lightdriven electron transfer to repair UV damaged single strand DNA but not double strand DNA. VcCryl has an active site FAD which is required for substrate binding and repair. Size exclusion chromatography (SEC) was used to observe changes in oligomer structure when changes in the oxidation state of the FAD cofactor were made. SEC studies found the oxidized state exists as a dimer with an observed mass of 163 kDa in solution, in dynamic equilibrium with a 67 kDa fragment. The reduced state exists as a monomer in …

The Role Of Stress-Activated Protein Kinases In Parasites, Tamara Kreiss

Theses, Dissertations and Culminating Projects

Lymphatic filariasis and leishmaniasis are neglected tropical diseases that are caused by nematode and protozoal parasites. These diseases cause disfiguration, leaving their host socially marked, and in some cases cause more severe disease that can lead to death. These infections, which tend to persist for long periods of time, also lead to bacterial and fungal co-infections, which further exacerbate the disease. Currently there are insufficient treatment options. Current therapies are often too expensive, have toxicity associated with them and are subjected to growing resistance amongst parasite populations. In this thesis I investigated two potential drug targets. The first, is the …

Nicotine And What Else?: Hplc Elution Optimization For The Analysis Of Alkaloids Found In Electronic Cigarettes, Jessica L. Murray

Honors Theses

Electronic cigarettes, or e-cigarettes, have been scrutinized by the Food and Drug Administration and other public health organizations for issues related to quality control and efficacy. Erratic nicotine delivery and numerous toxic compounds in refill solutions have been reported. The ultimate goal of this research is to add to the growing amount of knowledge regarding e-cigarette ingredient content, safety, and quality. Standards of the tobacco alkaloids nicotine, anabasine, cotinine, and myosmine were prepared and quantified using high performance liquid chromatography (HPLC). Various elution schemes were tested and adjusted for optimal analyte resolution, and a final elution scheme was developed to …

Reduction Of Ketoximes To Amines By Catalytic Transfer Hydrogenation Using Raney Nickel And 2-Propanol As Hydrogen Donor, Katherynne E. Taylor

Honors Theses

Ketoximes successfully underwent hydrogenolysis and hydrogenation under catalytic transfer conditions with Raney Nickel and 2-propanol as a hydrogen donor. Ketoximes were reduced to primary amines when 2% KOH was included in the reaction. In the absence of KOH N-isopropyl-secondary-amines were obtained in good yields.

Developing A Cardiomyocyte Proliferation Probe Utilizing Non-Degradable Ckap2., Suraj Kannan

College of Arts & Sciences Senior Theses

Currently, one of the biggest controversies in the field of cardiac regenerative medicine revolves around the ability of cardiomyocytes to proliferate. In contrast to the long-held hypothesis that the heart is terminally differentiated, post-mitotic organ, some studies have suggested that the heart is capable of undergoing limited regeneration following injury. Others have reported induction of cardiomyocyte proliferation following various treatments, mostly in vitro. Conventional tools such as BrdU labeling fail to distinguish between mitotic events and other phenomena such as endoreduplication or poly-nucleation, thus making it difficult to assess cardiomyocyte proliferation. The present study presents a novel and innovative way …

Radiopharmaceuticals: The Application Of Technetium-99m And Rhenium Complexes, Angela Kristin Binion

Renée Crown University Honors Thesis Projects - All

Nuclear imaging used in diagnostic medicine requires the use of radiopharmaceuticals to make biological areas visible under a gamma camera. Although much success has been found in the use of technetium based imaging agents, their corresponding rhenium complexes can provide insight into the chemical properties of these radiopharmaceuticals without the potentially damaging effects of radiation. Technetium and rhenium complexes utilize a bifunctional chelator to act as a linker between biological vectors and the metal, improving the coordination between the two. Ligands containing thiazole rings have been successfully coordinated to technetium or rhenium tricarbonyl complexes, although it is uncertain whether coordination …

Porphyrin Cross-Linkers For Generating Soluble Molecularly Imprinted Polymers From Polyethyleneimine, Mohammed R. Elshaer

Seton Hall University Dissertations and Theses (ETDs)

Molecular recognition is vital to many biochemical processes and is at the heart of promising bio-medically related technologies. Molecular imprinting has a long-standing history as a successful method for mimicking the molecular recognition phenomena exhibited by nature, whereby artificial receptors are prepared for a given target molecule based on synthetic polymers. The molecularly imprinted polymer (MIP) contains a three dimensional network with a memorized cavity specific to the shape and functionality of the templated target molecule. The utility of traditional MIPs has been limited due to an inherent lack of solubility. We have worked toward developing a system that allows …

Drug Screening Target For Alzheimer's Disease And Method Of Screening Potential Drugs, Joseph Audie, Sergei Y. Ponomarev

Chemistry & Physics Faculty Publications

Drug screening targets and method of screening for potential drugs for treatment or amelioration of Alzheimer's Disease are provided.

Study Of The Structure-Property Relationships That Determine The Effects Of Latexes And Starch Containing Latex Emulsions On The Performance Of The Barrier Coatings (Sub-Coat) For Paper, Joanna Marie Monfils

Master's Theses

The history of carbonless paper dates back to the 1940s. Before this, a carbon copy sheet was needed between sheets of paper to be able to produce one or more copies simultaneously during writing. The pressure from a pen or typewriter would help deposit the ink of the carbon paper onto the blank sheet of paper under the original written sheet to create a “carbon copy.” This method did however, have its disadvantages. Not only did it produce a limited number of copies, but it was also a messy process. So came the creative process of using microencapsulated dyes to …

Using A Spreadsheet To Solve The SchröDinger Equations For The Energies Of The Ground Electronic State And The Two Lowest Excited States Of H2, Yingbin Ge, Robert C. Rittenhouse, Jacob C. Buchanan, Benjamin Livingston

All Faculty Scholarship for the College of the Sciences

We have designed an exercise suitable for a lab or project in an undergraduate physical chemistry course that creates a Microsoft Excel spreadsheet to calculate the energy of the S₀ ground electronic state and the S₁ and T₁ excited states of H₂. The spreadsheet calculations circumvent the construction and diagonalization of the Fock matrix and thus can be accomplished by any undergraduate chemistry student with basic calculus skills. The wave functions of the S₀, S₁, and T₁ states of H₂ are constructed from the symmetry-adapted bonding and antibonding molecular …

Effects Of Varying The Cure Profiles Of An Epoxy-Amine System, Patrick W. Hollingsworth

Honors Theses

The cure of an epoxy prepolymer with an amine hardener induces stress in thermosetting systems. The extent of residual stresses in the cured epoxy-amine thermosets are dependent on several factors; one of which is the cure profile utilized. The effect of cure profile on cure induced stresses of an epoxy-amine thermoset was examined in the current study. A difunctional epoxide based on diglycidyl ether of bisphenol-A (DGEBA) and a tetrafunctional amine curative were used to conduct this study. Two cure profiles were selected to prepare samples of varying degrees of stress in the cured thermosets. The first was constant heating …

Raft Polymerization Of Sulfonamide-Containing Methacrylamides, Michael B. Sims

Honors Theses

Targeted delivery of cancer therapeutics offers an exciting new opportunity for utilization of controlled polymerization techniques. However, a major obstacle in achieving the desired therapeutic effect is facilitating endosomal release of active agents following endocytosis. Peptides and pH-responsive polymers have been utilized as a means of triggering endosomal release via phase transition-induced membrane disruption. Unfortunately, the fidelity by which the pKa of these polymers/peptides can be varied is limited, such that it reduces their versatility in altering the phase transition point to best match the endosomal pH of a particular cell-type. Herein, we report the controlled polymerization of library of …

Purple Urine Bag Syndrome: Regulation Of Pyrimidine Enzymes, Ashley N. Broadway

Honors Theses

Purple Urine Bag Syndrome, PUBS, is a unique condition that shows an interesting discoloration of the urine from women who have a chronic catheter. This study focused on the regulation of enzyme activities to determine the effects that may create an environment where PUBS is seen in patients with catheters. In this study, the reductive pyrimidine pathway was used to read out the bacteria Pseudomonas aeruginosa ATCC 15692. This microorganism expresses a pathway that synthesizes indoxyl from tryptophan. The bacteria strains were grown using various carbon and nitrogen sources. Concentrations of acetonitrile at 2 mM and 10 mM, concentrations of …

Amino Acid Methyl Ester Chiral Ionic Liquids: A Concentration Study, Christopher J. Brown

Undergraduate Honors Thesis Collection

This project will investigate novel amino acid methyl ester chiral ionic liquids and determine how increased concentration of lanthanide solute and changes in size of counter ions tetramethylammonium and tetrabutylammonium affects interaction between the ionic liquid and the fluorescent lanthanide solute. Both concentration dependence and temperature dependence were discovered. The chiral ionic liquid [L-prolineCl][TfiN] reacted uniquely to the change in concentration.

Analysis Of Ligand Bias In Functional Studies Involving The Allosteric Modulation Of G Protein- Coupled Receptors, Frederick J. Ehlert, Michael T. Griffin

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Introduction

The affinity constants of a ligand for active and inactive states of a receptor ultimately determine its capacity to activate downstream signaling events. In this report, we describe a reverse-engineering strategy for estimating these microscopic constants.

Methods

Our approach involves analyzing responses measured downstream in the signaling pathway of a G protein-coupled receptor under conditions of allosteric modulation and reduced receptor expression or partial receptor inactivation. The analysis also yields estimates of the isomerization constant of the unoccupied receptor, the sensitivity constant of the signaling pathway, and the more empirical parameters of the receptor population including the observed affinities …

Redox Active Motifs In Selenoproteins, Fei Li, Yuliya Pepelyayeva, Elias S. J. Arner, Craig A. Bayse, Sharon Rozovsky

Chemistry & Biochemistry Faculty Publications

Selenoproteins use the rare amino acid selenocysteine (Sec) to act as the first line of defense against oxidants, which are linked to aging, cancer, and neurodegenerative diseases. Many selenoproteins are oxidoreductases in which the reactive Sec is connected to a neighboring Cys and able to form a ring. These Sec-containing redox motifs govern much of the reactivity of selenoproteins. To study their fundamental properties, we have used Se-77 NMR spectroscopy in concert with theoretical calculations to determine the conformational preferences and mobility of representative motifs. This use of Se-77 as a probe enables the direct recording of the properties of …

Biogeochemistry Of Trace Elements In The Mixing Zone Of The Mississippi And Atchafalaya Rivers And Chemical Distributions As Affected By The Deepwater Horizon Blowout, Dongjoo Joung

Dissertations

Selected trace elements (TEs), dissolved organic carbon, and nutrients were studied in Louisiana Shelf waters including the Mississippi (MR) and Atchafalaya (AR) River plumes during periods of high, intermediate, and low river discharges. Seasonal variations in TEs were observed at low salinity, reflecting seasonal changes in the river water endmembers. Shelf surface water dissolved Mo, Cs, U, Ni, and Cu showed conservative behavior with minor scattering in some high salinity waters. Based on associated mixing experiments, nutrient and chlorophyll distributions, as well as surface-bottom concentration contrasts, the non-conservative behavior of TEs was variously related to colloidal flocculation (Fe, Cr), biological …

Metal Stopping Reagents Facilitate Discontinuous Activity Assays Of The De Novo Purine Biosynthesis Enzyme Pure, Kelly L. Sullivan, Loredana C. Huma, Elwood Mullins, Michael E. Johnson, T. Joseph Kappock

Department of Biochemistry Faculty Publications

The conversion of 5-aminoimidazole ribonucleotide (AIR) to 4-carboxy-AIR (CAIR) represents an unusual divergence in purine biosynthesis: microbes and nonmetazoan eukaryotes use class I PurEs while animals use class II PurEs. Class I PurEs are therefore a potential antimicrobial target; however, no enzyme activity assay is suitable for high throughput screening (HTS). Here we report a simple chemical quench that fixes the PurE substrate/product ratio for 24 h, as assessed by the Bratton-Marshall assay (BMA) for diazotizable amines. The ZnSO₄ stopping reagent is proposed to chelate CAIR, enabling delayed analysis of this acid-labile product by BMA or other HTS methods