Chemistry Commons^™

Chemical And Biological Evaluation Of Antibiotic-Based Ionic Liquids And Gumbos Against Pathogenic Bacteria, Marsha Rae Cole

LSU Doctoral Dissertations

The research presented in this dissertation explores a novel pragmatic therapeutic approach for control, prevention, and treatment of infectious disease using Active-Pharmaceutical Ingredient-based Ionic Liquids (API-ILs) and Groups of Uniform Materials Based on Organic Salts (GUMBOS). Accordingly, several antiseptic- and antibiotic-based API-ILs and GUMBOS were synthesized and characterized using a combination of analytical and microbiological techniques. Overall, this research presents an advanced alternative to combination antibiotic therapy by using a novel group of ionic antimicrobial materials that have controlled pharmacokinetics, improved bioavailabilities, reduced toxicities, multi-modal properties, and potent antimicrobial spectrum of activity as a viable alternative to combating bacterial infections. …

Synthesis And Characterization Of Red And Near-Infrared Bodipy-Based Fluorophores For Various Biological Applications, Timsy Kaur Uppal

LSU Doctoral Dissertations

ABSTRACT 4,4-Difluoro-3a,4a-diaza-s-indacene, better known as BODIPY® dyes, have attracted considerable attention due to their intriguing physicochemical and spectral properties, including high absorption coefficient, fluorescence quantum yield and good photochemical stability. Despite the recent progress achieved in this field, the synthesis of BODIPY derivatives that absorb and emit in the red- and NIR-region of the electromagnetic spectrum and their application to biomolecular targets, represents a long-standing challenge in BODIPY chemistry. This research work is therefore focused on the synthesis and characterization of red and NIR-emissive BODIPY-based fluorophores for various bioanalytical and biomedical applications. Chapter 1 of this dissertation represents a concise …

On The Synthesis, Characterization, And Magnetization Of Ln-M-X (Ln = Lanthanide; M = Ti-Cr, Cu, Mo, Pd; X = Al, Ga) Intermetallics, Michael James Kangas

LSU Doctoral Dissertations

The focus of the research presented herein was to grow single crystals of Ln-M-X (Ln = lanthanide; M = Ti-Cr, Cu, Mo, Pd; X = Al, Ga) intermetallic compounds and to characterize their crystal structures and physical properties. Overall, the flux growth technique facilitated a detailed analysis of previously known structure-types (LnM2Al20 (Ln = La, Ce, Pr, Yb; M = Ti, V, Cr), Ln6M4Al43 (Ln = Gd, Yb; M = Cr, Mo), and Yb2Pd3Ga9), as well as the synthesis and characterization of new compounds (LnCrxGa3 (Ln = Ho, Er; x ~ 0.13), YbCr2Al20-xFex (x ~ 0.2), Ln(Cu,Al,Ga)13-x, and Ln2PdGa12 (Ln …

Total Synthesis Of A Virotoxin And Analogs For Conformational Studies, Benson Jumba Edagwa

LSU Doctoral Dissertations

This dissertation describes the first total synthesis of alloviroidin in trace amounts, along with that of three analogs containing L-proline (Pro), trans-3-hydroxyproline (3-Hyp) or cis-4-hydroxyproline (4-hyp) residue substituting for 2,3-trans-3,4-trans-dihydroxyproline in the natural product. We report herein an efficient strategy that provides a dipeptide containing a (2S,4S)-4,5-dihydroxyleucine (dihyLeu) residue, including a diastereoselective dihydroxylation. Nα-Carbobenzyloxy-(2S)-4,5-dehydroleucine was coupled with valine ethyl ester to give a dipeptide that was subjected to a Sharpless asymmetric dihydroxylation to introduce the diol. The relative configuration at C4 was assigned as S by X-ray crystallography after derivatization as an α-amino-γ-lactone hydrochloride salt. The preparation of the 2-(methylsulfonyl)tryptophan …

Single-Molecule Detection Of Molecular Beacons Generated From Ldr On Thermoplastic Microfluidic Device For Bioanalysis, Zhiyong Peng

LSU Doctoral Dissertations

Current clinical techniques for nucleic acid detection and analysis often involve PCR, lacking adequate specificity or sensitivity to meet the stringent requirements in certain applications. This research aims to develop an innovative molecular assay and the associated hardware to rapidly signal the presence of certain targets using reporter sequence found in their genome without requiring PCR. This assay coupled the sensitivity of single-pair fluorescence resonance energy transfer (spFRET) with the specificity of ligase detection reaction (LDR) to provide near real-time readout of target biomarkers. Heightened concerns on potential bioterrorism threats, such as rapid dissemination of pathogenic bacteria or viruses into …

Scas Officers And Council Members 2011 - 2012

Journal of the South Carolina Academy of Science

No abstract provided.

Understanding The Emission From Semiconductor Nanoparticles, Beth Ann Manhat

Dissertations and Theses

This dissertation describes the synthesis and characterization of fluorescent semiconductor nanoparticles (NPs) in order to optimize their biomedical utility for imaging and sensing applications. While both direct and indirect bandgap semiconductor NPs have been studied, control over their emission properties vary. Quantum confinement (QC), which primarily controls the emission wavelength of nanosized semiconductors, dictates that as the size of semiconductor NPs decrease, the magnitude of the bandgap increases, resulting in changes in the observed emission wavelength: smaller NPs have a larger bandgap, and thus a bluer emission. However, surface, interfacial, or shell defects can act as non-radiative or radiative recombination …

Magnetic And Orbital Orders Coupled To Negative Thermal Expansion In Mott Insulators, Ca2ru1-Xmxo4 (M = 3d Transition Metal Ion), Tongfei Qi

Theses and Dissertations--Physics and Astronomy

Ca₂RuO₄ is a structurally-driven Mott insulator with a metal-insulator (MI) transition at T_MI = 357K, followed by a well-separated antiferromagnetic order at T_N = 110 K. Slightly substituting Ru with a 3d transition metal ion M effectively shifts T_MI and induces exotic magnetic behavior below T_N. Moreover, M doping for Ru produces negative thermal expansion in Ca₂Ru_1-xM_xO₄ (M = Cr, Mn, Fe or Cu); the lattice volume expands on cooling with a total volume expansion ratio reaching as high as 1%. The onset of the …

Effects Of Activated Carbon Surface Chemistry Modification On The Adsorption Of Mercury From Aqueous Solution, Emily K. Faulconer

Publications

Mercury (Hg), a naturally occurring element, is toxic and can lead to negative health impacts for humans and ecosystems. Activated carbon adsorption is effective in treating Hg-laden aqueous effluent for safe discharge. Two modifications of commercially available activated carbon were investigated: iron impregnation to allow for magnetic sorbent recapture and wet chemical oxidation to enhance aqueous Hg capture. The modified carbons were characterized by nitrogen adsorption-desorption, XRD, pHpzc, vibrating sample magnetometry, elemental analysis, and total acidity titration. The 3:1 C:Fe magnetic powdered activated carbon (MPAC) retained a high surface area of 790 m2 /g and was 95% magnetically recoverable, with …

Design Of Novel Inhibitors For Infectious Diseases Using Structure-Based Drug Design: Virtual Screening, Homology Modeling And Molecular Dynamics, Divya Ramamoorthy

USF Tampa Graduate Theses and Dissertations

The main aim of the study in this thesis was to use structure-based protocols to design new drugs for enzymes, DXS and DXR in the non mevalonate pathway. Another aim of this study was to identify the dimer interface in E.coli FabH as an allosteric binding site for designing new class of anti-infective drugs. We have attempted to identify potential inhibitors for DXS by docking the NCI Diversity set compounds, compound libraries available from GSK-MMV and St. Jude's Children's research center. FabH dimer interface has been identified as a potential target using SiteMap, Alanine mutagenesis and docking studies.

The first …

Emission Changes Resulting From The San Pedro Bay, California Ports Truck Retirement Program, Gary A. Bishop, Brent G. Schuchmann, Donald H. Stedman, Douglas R. Lawson

Fuel Efficiency Automobile Test Publications

Recent US EPA emissions regulations have resulted in lower emissions of particulate matter and oxides of nitrogen from heavy-duty diesel trucks. To accelerate fleet turnover the State of California in 2008 along with the Ports of Los Angeles and Long Beach (San Pedro Bay Ports) in 2006 passed regulations establishing timelines forcing the retirement of older diesel trucks. On-road emissions measurements of heavy-duty diesel trucks were collected over a three-year period, beginning in 2008, at a Port of Los Angeles location and an inland weigh station on the Riverside freeway (CA SR91). At the Port location the mean fleet age …

Three-Component Passerini-Smiles Coupling Reaction Of Aldehydes And Isocyanides With Tropolone Catalyzed By Silica Nanoparticles, Abdolhossain Massoudi, Issa Amini, Ali Ramazani, Fatemeh Zeinali Nasrabadi

Turkish Journal of Chemistry

The use of Smiles rearrangement in Passerini-type couplings with tropolone allows very straightforward multicomponent formation of \alpha-aryloxy amide derivatives. The 3-component addition of isocyanide to tropolone (2-hydroxy-2,4,6-cycloheptatrien-1-one) and aldehyde in the presence of silica nanoparticles (silica NP, ca. 70 nm) proceeds easily in methanol to form the title compounds in a new Passerini-Smiles-type reaction.

Preparation Of Porphyrinated Polyacrylonitrile Fiber Mat Supported Tio_2 Photocatalyst And Its Photocatalytic Activities, Linjun Shao, Ji Chen, Luyao He, Guiying Xing, Weixi Lv, Zaina Chen, Chenze Qi

Turkish Journal of Chemistry

Fe(III)meso-tetraphenylporphyrinated polyacrylonitrile fiber mat supported TiO_2 photocatalyst (PANC/ TiO_2 mat) was prepared via copolymerization and electrospinning. SEM images showed that well-defined fibers with diameters around 1.47 \pm 0.26 \mu m were fabricated from Fe(III)meso-tetraphenylporphyrin (FeTPP)-acrylonitrile copolymer (PANC) and TiO_2 mixture. The XRD characterizations demonstrated that the electrospinning process had no effect on the anatase structure of TiO_2. The photocatalytic activity of the PANC/TiO_2 mat was examined for the photodegradation of methyl red in aqueous solution under the irradiation of visible light. The results showed that this PANC/TiO_2 fiber mat was very efficient for the photodegradation of methyl red, with a …

Properties Of The Mixed Adsorption Layer: Neutral Detergent-Tetramethylthiourea At Interface Electrode/Solution, Jolanta Nieszporek, Dorota Sienko, Dorota Gugala-Fekner, Malgorzata Klin

Turkish Journal of Chemistry

The mixed adsorption layers of tetramethylthiourea and a neutral detergent formed at the electrode surface in 1 M NaClO_4 are described in this paper. The systems were characterized by the measurement of differential capacity, zero charge potential, and surface tension at the same potential. The data were analyzed to obtain the surface pressure and relative surface excess of tetramethylthiourea as a function of electrode charge and bulk concentration of the studied compounds. The values of the lateral interaction parameters, obtained in the presence and in the absence of decanoyl-N-methylglucamide (C_{17}H_{35}NO_6), change differently depending on the isotherm used, but \Delta G° …

Comparative Photodecolorization Of Red Dye By Anatase, Rutile (Tio_2), And Wurtzite (Zno) Using Response Surface Methodology, Shahab Khameneh Asl, Sayad Khatib Sadrnezaad, Mansour Keyanpour-Rad, Deni̇z Üner

Turkish Journal of Chemistry

Treatment of dye pollution containing C.I. Acid Red 14 (AR14) by a coupled photocatalytic process was studied. Titanium dioxide, in the form of anatase and rutile, and zinc oxide, were used as photocatalysts. The investigated photocatalysts were Aldrich-produced nanopowders with crystallites of a mean size of 20-30 nm and a specific surface area of about 50 m^2/g. A comparison of TiO_{2(anatase)}, TiO_{2(rutile)}, TiO_{2(a,r)}, and ZnO for the decolorization of the AR14 solution was performed. Results showed that color removal followed the decreasing order of TiO_{2(a,r)}, ZnO > TiO_{2(a,r)} > TiO_{2(a)}, ZnO > TiO_{2(r)}, ZnO >TiO_{2(a,r)} > TiO_{2(a)} > ZnO > TiO_{2(r)}. Response surface methodology (RSM) was …

2- Bromophenyl Salicylate, Donovan Thompson, Sierra Mitchell, Kevin Clarke, Kerry Sarden, Karelle Aiken

Chemistry: Faculty Publications (1990-2023)

2-Bromophenyl salicylate is synthesized from 2-benzyloxybenzoic acid in two steps. The final compound has been characterized by IR,¹H-NMR, ¹³C-NMR and HRMS. The melting point for 2-bromophenyl salicylate is provided.

A General Synthesis Of Bis-Indolylpiperazine-2,5-Diones, Stephen N. Crooke, Christine Whitlock

Chemistry: Faculty Publications (1990-2023)

The one-pot synthesis of three dragmacidin derivatives is reported. Sarcosine anhydride (4) is brominated and immediately reacted with the corresponding indole to produce the products, namely 3,6-bis(5′-methoxy-3′-indolyl)-1,4-dimethylpiperazine-2,5-dione (1), 3,6-bis(7′-methyl-3′-indolyl)-1,4-dimethylpiperazine-2,5-dione (2) and 3,6-bis-(6′-chloro-3′-indolyl)-1,4-dimethylpiperazine-2,5-dione (3), which are characterized by ¹H-NMR.

An Unexpected Stereochemical Insignificance Discovered In Acinetobacter Baumannii Quorum Sensing, Amanda L. Garner, Sook Kyung Kim, Jie Zhu, Anjali Kumari Struss, Richard Watkins, Brent D. Feske, Gunnar F. Kaufmann, Kim D. Janda

Chemistry: Faculty Publications (1990-2023)

Stereochemistry is a key aspect of molecular recognition for biological systems. As such, receptors and enzymes are often highly stereospecific, only recognizing one stereoisomer of a ligand. Recently, the quorum sensing signaling molecules used by the nosocomial opportunistic pathogen, Acinetobacter baumannii, were identified, and the primary signaling molecule isolated from this species was N-(3-hydroxydodecanoyl)-l-homoserine lactone. A plethora of bacterial species have been demonstrated to utilize 3-hydroxy-acylhomoserine lactone autoinducers, and in virtually all cases, the (R)-stereoisomer was identified as the natural ligand and exhibited greater autoinducer activity than the corresponding (S)-stereoisomer. Using chemical synthesis and biochemical assays, we have uncovered a …

Iron(Iii) Tosylate Catalyzed Acylation Of Alcohols, Phenols, And Aldehydes, Ram Mohan, Neil Baldwin, Anna Nord, Brendan O’Donnell

Scholarship

Iron(III) p-toluenesulfonate (tosylate) is an efficient catalyst for acetylation of alcohols, phenols, and aldehydes. The acetylation of 1° and 2° alcohols, diols, and phenols proceeded smoothly with 2.0 mol % of catalyst. However, the reaction worked well with only a few 3° alcohols. The methodology was also applicable to the synthesis of a few benzoate esters but required the use of 5.0 mol % catalyst. Aldehydes could also be converted into the corresponding 1,1-diesters (acylals) under the reaction conditions. Iron(III) tosylate is an inexpensive, and easy to handle, commercially available catalyst.

A Discovery-Oriented Approach To Solid-Phase Peptide Synthesis, Brian Brennan, Matthew Bockman, Christopher Miedema

Scholarship

In this discovery-oriented laboratory experiment, students use solid-phase synthesis techniques to construct a dipeptide containing an unknown amino acid. Following synthesis and cleavage from the polymeric support, electrospray ionization-mass spectrometry is employed to identify the unknown amino acid that was used in the peptide coupling. This experiment, performed in two, 3-h laboratory periods, provides an opportunity for students to learn the technique of solid-phase peptide synthesis and to critically evaluate data that they generate in the laboratory. The experiment is suitable for second-semester organic chemistry students as they learn methods for the formation of amide bonds or upper-level biochemistry students …

Characterization And Electrochromic Properties Of Poly(2,3,5,6-Tetrafluoroaniline): Progress Towards A Transparent Conducting Polymer, Lavinia Astratine, Edmond Magner, John Cassidy, Tony Betts

Articles

Electrochromic films of poly(2,3,5,6-tetrafluoroaniline) (PTFA) were formed on ITO substrates from aqueous solutions utilising perchloric acid (HClO₄) as dopant. Electrochemical and spectroscopic characterization of PTFA films was performed in background electrolyte and in solutions with the addition of tetrahydrofuran. When the PTFA film was removed from its growth medium, a significant decrease in the faradaic current was observed. The faradaic response increased on addition of tetrahydrofuran which facilitates ion movement through the polymer matrix. PTFA films deposited on ITO substrate were orange and light orange in the oxidized and reduced forms, respectively. The films were ca. 25 nm …

Chyd1 Solution Phase Synthesis Optimization And The Development Of A Novel Human Growth Hormone Antagonist And Agonist, Philip Murray

USF Tampa Graduate Theses and Dissertations

Inhibiting protein-protein interactions to achieve a therapeutically desired effect has been a goal in the field of drug discovery for decades. Recently, advances in peptidomimetics have led researches to the use of cyclized peptides to achieve this goal. Cyclization of linear peptides restricts the number of conformations of the peptide, increasing the peptide's affinity to binding to the desired target. Cyclization also stabilizes the peptide, allowing the peptide to be resistant to proteases. This study explores the optimization of solution phase synthesis of an important integrin-mediated cell adhesion cyclic peptide for the therapeutic inhibition of multiple myeloma, cHYD1. cHYD1 was …

Asymmetric Intra- And Intermolecular Cyclopropanation By Co(Ii)- Based Metalloradical Catalysis, Xue Xu

USF Tampa Graduate Theses and Dissertations

Metal-catalyzed cyclopropanation of olefins with diazo reagents has attracted research interest because of its fundamental and practical importance. The resulting cyclopropyl units are recurrent motifs in biologically important molecules and can serve as versatile precursors in organic synthesis. Since they were first introduced in 2004, Co(II) complexes of D₂-symmetric chiral amidoporphyrins [Co(D₂-Por*)] have emerged as a new class of catalysts for asymmetric cyclopropanation. These metalloradical catalysts have been shown to be highly effective for asymmetric intermolecular cyclopropanation of a broad scope of substrates with different classes of carbene sources, particularly including electron-deficient olefins and acceptor/acceptor-substituted …

Novel Nonresonant And Resonant Mechanisms Leading To The Breakdown Of The Franck-Condon Approximation In Photoionization, David Adam Hardy

LSU Doctoral Dissertations

This thesis attempts to answer the question of how electrons interact with a molecular framework prior to and during emission through photoionization. These studies interrogate several behaviors of allowed and forbidden photoelectron transitions such as shape resonances, non-resonant intrachannel vibronic coupling as a result of Cooper minima, and chemically-induced nonresonant coupling, all of which provide new insights into correlations between the electronic and molecular degrees of freedom. Research presented in this thesis utilizes high-resolution photoelectron spectroscopy, and undulator-based synchrotron radiation at the Advanced Light Source, a synchrotron radiation source in Berkeley, California. Data are collected from near threshold to several …

Geometrical And Electronic Structure Of Metal Oxide Nanoparticles On Silica And Alumina, Udaya Indike Rodrigo

LSU Doctoral Dissertations

Recent studies demonstrated nanometer-scale combustion-generated nanoparticles cause demonstrable health effects. It is essential to understand the chemical characteristics of these nanoparticles. Since combustion-generated nanoparticles arise in complex mixtures, we employed a dendrimeric method to generate simpler, more reproducible nanoparticles, which were tethered to fumed silica and alumina to provide surrogates for fly ash. We collected XANES and EXAFS data, which are useful for characterizing disordered mixtures where the metal is a minor component. The effect of particle size on structural properties was studied with copper oxide nanoparticles on fumed silica. XANES data demonstrated copper atoms in the nanoparticles are present …

Fabrication, Analysis, Application, And Characterization Of Core-Containing Microparticles And Hydrophilic Microfluidic Devices Produced Via The Primary- And In Situ Tertiary-Amine Catalyzed Michael Addition Of Multifunctional Thiols To Multifunctional Acrylates, Christopher O. Bounds

LSU Doctoral Dissertations

The objective of this research was to investigate amine-catalyzed thiol-acrylate chemistry for various novel applications that could fully utilize the untapped potential of this useful and robust chemistry. The use of this chemistry in each application solved a problem, improved on a disadvantage of current technologies, and decreased the level of complexity in association with required time, cost, and/or preparation conditions. The first novel application conceived, applied, and analyzed was in the field of microencapsulation. A novel approach for the preparation of microparticles via a dispersion polymerization using the primary amine-catalyzed addition of a trithiol to a triacrylate was realized …

A Simple Approach For Synthesis, Characterization And Bioactivity Of Bovine Bones To Fabricate The Polyurethane Nanofiber Containing Hydroxyapatite Nanoparticles, Faheem A. Sheikh, M. A. Kanjwal, Javier Macossay-Torres, N. A. M. Barakat, H. Y. Kim

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)

In the present study, we had introduced polyurethane (PU) nanofibers that contain hydroxyapatite (HAp) nanoparticles (NPs) as a result of an electrospinning process. A simple method that does not depend on additional foreign chemicals had been employed to synthesize HAp NPs through the calcination of bovine bones. Typically, a colloidal gel consisting of HAp/PU had been electrospun to form nanofibers. In this communication, physiochemical aspects of prepared nanofibers were characterized by FE-SEM, TEM and TEM-EDS, which confirmed that nanofibers were well-oriented and good dispersion of HAp NPs, over the prepared nanofibers. Parameters, affecting the utilization of the prepared nanofibers in …

Bismuth Nitrate-Induced Microwave-Assisted Expeditious Synthesis Of Vanillin From Curcumin, Debasish Bandyopadhyay, Bimal K. Banik

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)

Background: Curcumin and vanillin are the two useful compounds in food and medicine. Bismuth nitrate pentahydrate is an economical and ecofriendly reagent.

Method: Bismuth nitrate pentahydrate impregnated montmorillonite KSF clay and curcumin were subjected to microwave irradiation.

Results: Microwave-induced bismuth nitrate-promoted synthesis of vanillin from curcumin has been accomplished in good yield under solvent-free condition. Twenty-five different reaction conditions have been studied to optimize the process.

Conclusion: The present procedure for the synthesis of vanillin may find useful application in the area of industrial process development.

Ultrasound-Assisted Aza-Michael Reaction In Water: A Green Procedure, Debasish Bandyopadhyay, Sanghamitra Mukherjee, Luis C. Turrubiartes, Bimal K. Banik

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)

The conjugate addition of amines to conjugated alkenes (commonly known as aza-Michael reaction) constitutes a key step for the synthesis of various complex natural products, antibiotics, α-amino alcohols and chiral auxiliaries. Ultrasound-induced addition of several amines to α, β-unsaturated ketones, esters and nitriles has been carried out very efficiently in water as well as under solvent-free conditions. No catalysts or solid supports have been used in this method. Remarkable enhancement of reaction rate has been observed in water under ultrasound-induced method. This environmentally benign procedure has provided clean formation of the products with better selectivity.

Synthesis Of Melting Gels Using Mono-Substituted And Di-Substituted Alkoxysiloxanes, Lisa Klein, Andrei Jitianu

Publications and Research

Hybrid organic-inorganic sol-gel materials containing silica were first called “ORMOSILs” in 1984.¹ Since then, the number of hybrid organicinorganic combinations has increased rapidly.² Hybrid materials have remarkable features resulting from the synergistic combination of both inorganic and organic components that make them suitable for a wide range of applications such as electrochemical devices, biomedical applications including drug delivery, and electronic and optoelectronic applications including light-emitting diodes, photodiodes, solar cells, gas sensors and field effect transistors.

Generally, organic-inorganic materials are classified in two broad categories: Class I materials where the organic and inorganic components are embedded one within the …