Chemistry Commons^™

Effects Of Monochloramine And Free Chlorine On Copper Dissolution In Drinking Water, Ryan C. Abington

Opportunities for Undergraduate Research Experience Program (OURE)

The effects of the disinfectant's free chlorine and monochloramine have been studied on thin copper films using the electrochemical quartz crystal microbalance, scanning electron microscopy and x-ray diffraction. It has been found that after twenty-four hours of immersion, the hypochlorite and the monochloramine both convert some of the copper into cuprous oxide. However, after immersion in monochloramine, tiny pinholes in the copper develop on the electrode and the gold substrate is visible underneath. This leads to suggest that while free chlorine may oxidize copper, monochloramine will oxidize copper and can cause pitting in the metal.

An Evaluation Of Supercritical Drying And Peg/Freeze Drying Of Waterlogged Archaeological Wood, Eric Schindelholz, Robert Blanchette, Desmond C. Cook, Michael Drews, Steve Hand, Benjamin Held, Joel Jurgens, Betty Seifert

Physics Faculty Publications

This study was undertaken to evaluate the physical effects of drying waterlogged archaeological wood using supercritical carbon dioxide as compared to air drying and the popular polyethylene glycol (PEG)/freeze drying method. Previous studies have shown supercritical drying to be a potentially advantageous alternative to current methods of drying waterlogged wood through reduced processing time, minimal shrinkage, and increased success for reversibility. Samples in the form of blocks and planks of a few centimeters in size were prepared from two archaeological waterlogged wood sources and grouped into three treatment sets: one for air drying, one for PEG/freeze drying, and the other …

Portable Emission Measurements Of Snowcoaches And Snowmobiles In Yellowstone National Park, Gary A. Bishop, Ryan Stadtmuller, Donald H. Stedman

Fuel Efficiency Automobile Test Publications

No abstract provided.

Use Of The Mitsunobu Reaction In The Synthesis Of Orthogonally Protected A,B-Diaminopropionic Acids, Fintan Kelleher, Keith Ó Proinsias

Articles

Orthogonally protected a,b-diaminopropionic acids have been synthesised in good yields by the reaction of N-trityl L-serine esters with N-substituted sulfonamides under Mitsunobu reaction conditions (DEAD, PPh₃, THF). The best isolated yields were obtained when N-Boc p-toluenesulfonamide was used as the nitrogen nucleophile precursor in the Mitsunobu reaction. Subsequently, the N-trityl group was efficiently replaced with the more stable allyloxycarbonyl (alloc) group.

A Novel Processing Route For The Production Of Nanoparticulate Zinc Oxide Using An Isophthalate Precursor, Grainne Duffy, Declan Mccormack, Suresh Pillai

Articles

Zinc oxide nanoparticles have been processed from a novel isophthalate precursor. In contrast to those processed from an oxalate precursor, this material exhibits three-dimensional, non-directional aggregation behaviour.

Such non-directional aggregation of uniaxial crystallites may allow for the production of structures with a higher proportion of catalytically active surfaces than can be prepared through conventional sol–gel methods. XRD,

FTIR, TEM and SEM were used to characterize the synthesized materials.

Zinc oxide particles synthesized by using isophthalic acid (C6H4-1,3-(COOH)2) are found to be slightly smaller than the previously reported materials prepared through chelation with oxalic acid (H2C2O2・2H2O).

Interactions Of The Triaquatricarbonylrhenium(I) Cation With Nucleotides And Other N-Donor Ligands, Kristie Marie Adams

LSU Doctoral Dissertations

Transition metal centers possessing an octahedral geometry are useful for understanding the natural role of metal ions in biology. Complexes based on such metals might improve upon the widely used square planar Pt(II) anticancer drug cisplatin, cis-[Pt(NH₃)₂Cl₂]. The octahedral triaquatricarbonylrhenium(I) cation, fac-[Re(CO)₃(H₂O)₃]⁺, has been shown to possess anticancer activity. Furthermore, Re(I) complexes containing unstable rhenium isotopes have found utility as radiodiagnostic and radiotherapeutic agents. Thus, this work focuses on elucidating the fundamental coordination chemistry of fac-[Re(CO)₃(H₂O)₃]^{+ …}

Fabrication Of Dna Microarrays On Poly (Methylmethacrylate) Substrates For Biomolecular Reporting, Catherine N. Situma

LSU Doctoral Dissertations

DNA microarrays require the use of substrates with well-established surface modification / probe attachment chemistries. Glass/quartz have been widely adopted as typical support materials since their surface modification chemistries which involve the use of siloxane –based chemistries have been widely studied however; these chemistry is susceptible to hydrolytic cleavage especially at high or low pH values. Recently, polymers have been sought as alternative microarray support materials but their surface modification strategies are not well characterized compared to glass. This report will entail surface photo-modification of PMMA polymer substrates by UV irradiation which produces functional scaffolds of carboxylic groups that allow …

Mesoporous Matrices For Quantum Computation With Improved Response Through Redundance, T. E. Hodgson, Massimo F. Bertino, Nicholas Leventis, Irena D'Amico

Physics Faculty Research & Creative Works

We present a solid state implementation of quantum computation, which improves previously proposed optically driven schemes. Our proposal is based on vertical arrays of quantum dots embedded in a mesoporous material which can be fabricated with present technology. The redundant encoding typical of the chosen hardware protects the computation against gate errors and the effects of measurement induced noise. The system parameters required for quantum computation applications are calculated for II-VI and III-V materials and found to be within the experimental range. The proposed hardware may help minimize errors due to polydispersity of dot sizes, which is at present one …

Photosensitization Of Photoconductive And Photorefractive Composites Through The Inclusion Of Semiconductor Nanocrystals, Tyler Martin Fears

Opportunities for Undergraduate Research Experience Program (OURE)

A novel synthesis of NiS nanocrystals included in photorefractive polymeric composites is described. The nanocrystals were characterized using visible-absorption spectroscopy, energy dispersive X-ray spectroscopy, and transmission electron microscopy. We further demonstrate the ability to enhance aspects of the composites' photorefractive performance by performing ligand exchange on the nanocrystals prior to their incorporation into the polymer composite. It was originally believed that this modification of the nanocrystals' surface characteristics would result in an enhanced charge-transfer process between the nanocrystal and the charge transporting matrix. However, when the photo conductivities were determined and used in calculating the quantum efficiencies associated with the …

Unleaded Drinking Water: Equilibrium Potential Measurements For Monochloramine Disinfectant, Brandi Clark

Opportunities for Undergraduate Research Experience Program (OURE)

The strength of monochloramine, NH₂CI, as an oxidizing agent can be linked to its effect on Pb levels in drinking water. In this study, the equilibrium potential was measured as a function of pH from pH 8 to 12 and compared to a theoretical plot of formal potentials derived from the Nemst equation. The measured equilibrium potential was consistently about 300 mV more negative than the calculated potential - NH₂CI is a weaker oxidizing agent than predicted. When the measured potentials are plotted on a Pourbaix diagram, it is found that NH₂CI can oxidize …

Polymer Gels: Mimickin G Biological Environments, Joshua Carey

Opportunities for Undergraduate Research Experience Program (OURE)

A comparison of the hydrolysis of pyruvic acid in polymer gels and in aqueous environment will be studied using NMR techniques. Relaxation time and diffusion rates will be determined and compared to show the mimicking capability of the polymer gels to that of biological environments. This will allow for a means in which chemical reactions can be performed in a medium that more closely resembles the rate that the reaction would occur in biological systems.

N-(4-Methylphenyl) Benzenepropanamide - The First Isolated Amide From The Genus Paederia, Debasish Bandyopadhyay, Anupam Nayak, Bidyut Basak, Avijit Banerji, Julie Banerji, Asima Chatterjee, Thierry Prang, Alain Neuman

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)

Investigation of the stem of Paederia foetida (Rubiaceae) resulted in the isolation and characterization of N-(4-methylphenyl)-benzopropanamide, which was hitherto unknown as a natural product This is the first report of an amide for the genus Paederia.

Landholder Information For The Safe Use And Management Of Strychnine For Wild Dog Traps, Renee Donovan, David Goodall

Biosecurity published reports

Farmnote 33/2003 - Guide to the safe use of strychnine for jawed traps is included.

Strychnine is a highly poisonous substance that is used in Western Australia for the control of Wild Dogs and Emus. Its use is restricted by law.

This manual outlines your roles and responsibilities for using and managing Strychnine for Wild Dog control. In particular, this manual outlines the essential information you need to know in regard to:

• The legislative requirements for Strychnine control in Western Australia
• The properties and mode of action of Strychnine « How to lodge an application to use Strychnine
• How to …

Structure And Biosynthesis Of Heat-Stable Antifungal Factor (Hsaf), A Broad-Spectrum Antimycotic With A Novel Mode Of Action, Fengan Yu, Kathia Zaleta-River, Xiangcheng Zhu, Justin Huffman, Jeffrey C. Millet, Steven D. Harris, Gary Y. Yuen, Xing-Cong Li, Liangcheng Du

Department of Chemistry: Faculty Publications

A screen for antifungal compounds from Lysobacter enzymogenes strain C3, a bacterial biological control agent of fungal diseases, has previously led to the isolation of heat-stable antifungal factor (HSAF). HSAF exhibits inhibitory activities against a wide range of fungal species and shows a novel mode of antifungal action by disrupting the biosynthesis of a distinct group of sphingolipids. We have now determined the chemical structure of HSAF, which is identical to that of dihydromaltophilin, an antifungal metabolite with a unique macrocyclic lactam system containing a tetramic acid moiety and a 5,5,6-tricyclic skeleton. We have also identified the genetic locus responsible …

Corrosion Studies On The Uss Arizona With Application To A Japanese Midget Submarine, Brent M. Wilson, Donald L. Johnson, Hans Vantilburg, Matthew A. Russell, Larry E. Murphy, James D. Carr, Robert J. De Angelis, David L. Conlin

Department of Chemistry: Faculty Publications

The assessment of corrosion on the USS Arizona included the pioneering development of a minimum-impact cost-effective technique to determine the corrosion rate of steel-hulled shipwrecks in seawater. The technique, with potential application worldwide, is illustrated in this paper with the application to a World War II Japanese midget submarine submerged in deep waters off the Oahu, Hawaii, coast.

Dna Multiplex Hybridization On Microarrays And Thermodynamic Stability In Solution: A Direct Comparison, Daniel J. Fish, M. Todd Horne, Greg P. Brewood, Jim P. Goodarzi, Saba Alemayehu, Ashwini Bhandiwad, Robert P. Searles, Albert S. Benight

Chemistry Faculty Publications and Presentations

Hybridization intensities of 30 distinct short duplex DNAs measured on spotted microarrays, were directly compared with thermodynamic stabilities measured in solution. DNA sequences were designed to promote formation of perfect match, or hybrid duplexes containing tandem mismatches. Thermodynamic parameters DeltaH degrees , DeltaS degrees and DeltaG degrees of melting transitions in solution were evaluated directly using differential scanning calorimetry. Quantitative comparison with results from 63 multiplex microarray hybridization experiments provided a linear relationship for perfect match and most mismatch duplexes. Examination of outliers suggests that both duplex length and relative position of tandem mismatches could be important factors contributing to …

Landholder Information For The Safe Use And Management Of 1080, Renee Donovan, David Goodall

Biosecurity published reports

This manual outlines your roles and responsibilities for using and managing 1080. In particular this manual outlines the essential information you need to know in regard to:

• The legislative requirements for 1080 control in Western Australia
• The properties and mode of action of 1080
• How to lodge an application to lay 1080 baits How to safely store and transport 1080
• The procedures and notification required to carry out a baiting proposal
• Personal safety, identifying signs of poisoning & effecting appropriate first aid treatment
• Your responsibilities for notifying DAFWA and the Police of any accidents or incidents
• Methods for evaluating the …

Quantification Of Steroid Sex Hormones Using Solid-Phase Extraction Followed By Liquid Chromatography-Mass Spectrometry, Youssef Filali-Meknassi, Muriel Auriol, Craig D. Adams, Rao Y. Surampalli

Civil, Architectural and Environmental Engineering Faculty Research & Creative Works

In this study, the occurrence of trace amounts of natural and synthetic steroid estrogens in the aquatic environment was studied using liquid chromatography coupled with electrospray mass spectrometry, following solid-phase extraction (SPE). the SPE was performed with C18 and NH2 cartridges. the first objective was to develop a reliable method for analyzing steroid estrogens (resulting from human and animal excretions) in different matrices. the method developed was then applied to quantify the occurrence of natural and synthetic hormones (estrone [E1], 17β-estradiol [βE2], 17α-estradiol [αE2], estriol [E3], and 17α-ethinylestradiol [EE2]) in environmental samples in surface water and wastewater treatment plant (WWTP) …

Identification And Characterization Of A New Tubulin-Binding, Susan L. Mooberry, Kimberly N. Weiderhold, Sivanesan Dakshanamurthy, Ernest Hamel, Edith J. Banner, Anastasia Kharlamova, Jonathan Hempel, John T. Gupton, Milton L. Brown

Chemistry Faculty Publications

We studied the mechanism of action of 3,5-dibromo-4-(3,4-dimethoxyphenyl)-1H-pyrrole-2-carboxylic acid ethyl ester (JG-03-14) and found that it is a potent microtubule depolymerizer. JG-03-14 caused a dose-dependent loss of cellular microtubules, formation of aberrant mitotic spindles, accumulation of cells in the G₂/M phase of the cell cycle, and Bcl-2 phosphorylation. These events culminated in the initiation of apoptosis, as evidenced by the caspase 3-dependent cleavage of poly(ADP-ribose) polymerase (PARP). JG-03-14 has antiproliferative activity against a wide range of cancer cell lines, with an average IC₅₀ value of 62 nM, and it is a poor substrate for transport …

Eddy Correlation Measurements Of The Air/Sea Flux Of Dimethylsulfide Over The North Pacific Ocean, Christa A. Marandino, Warren J. De Bruyn, Scott D. Miller, Eric S. Saltzman

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Shipboard measurements of air/sea fluxes and sea surface concentrations of dimethylsulfide (DMS) were made over the tropical and midlatitude North Pacific Ocean. Atmospheric pressure chemical ionization mass spectrometry was used to measure DMS levels in ambient air and in air equilibrated with surface seawater drawn from a depth of 5 m. Air/sea fluxes were obtained using eddy covariance. Corrections and uncertainties involved in the calculation of fluxes from shipboard data are discussed. The surface ocean DMS concentrations measured during this study ranged from 1 to 10 nM, and atmospheric mixing ratios ranged from 20 to 1000 ppt. Air/sea fluxes ranged …

Flavin Charge Transfer Transitions Assist Dna Photolyase Electron Transfer, Spiros S. Skourtis, Tatiana Prytkova, David Beratan

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

This contribution describes molecular dynamics, semi-empirical and ab-initio studies of the primary photo-induced electron transfer reaction in DNA photolyase. DNA photolyases are FADH−-containing proteins that repair UV-damaged DNA by photo-induced electron transfer. A DNA photolyase recognizes and binds to cyclobutatne pyrimidine dimer lesions of DNA. The protein repairs a bound lesion by transferring an electron to the lesion from FADH−, upon photo-excitation of FADH− with 350–450 nm light. We compute the lowest singlet excited states of FADH− in DNA photolyase using INDO/S configuration interaction, time-dependent density-functional, and time-dependent Hartree-Fock methods. The calculations identify the lowest singlet excited state of FADH− …

Hyphenated Hplc-Ms Technique For Analysis Of Compositional Monosaccharides Of Transgenic Corn Glycoprotein And Characterization Of Degradation Products Of Diazinon, Fonofos And Aldicarb In Various Oxidation Systems, Tongwen Wang

Doctoral Dissertations

"The studies of this dissertation are composed of two sections. The first one deals with the analysis of compositional monosaccharides of transgenic corn glycoproteins. The method used in this study involved derivatization of monosaccharides with two fluorophores followed by HPLC/fluorescence detection for quantitative studies, and by HPLC/SSI/MS for identification confirmation of individual monosaccharide...The second section investigates the degradation processes of several pesticides including diazinon, fonofos and aldicarb in various oxidation systems"--Abstract, page iv.

Coupling Coherence Distinguishes Structure Sensitivity In Protein Electron Transfer, Tatiana Prytkova, Igor V. Kurnikov, David Beratan

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Quantum mechanical analysis of electron tunneling in nine thermally fluctuating cytochrome b562 derivatives reveals two distinct protein-mediated coupling limits. A structure-insensitive regime arises for redox partners coupled through dynamically averaged multiple-coupling pathways (in seven of the nine derivatives) where heme-edge coupling leads to the multiple-pathway regime. A structure-dependent limit governs redox partners coupled through a dominant pathway (in two of the nine derivatives) where axial-ligand coupling generates the single-pathway limit and slower rates. This two-regime paradigm provides a unified description of electron transfer rates in 26 ruthenium-modified heme and blue-copper proteins, as well as in numerous photosynthetic proteins.

Theoretical Investigation Of The Structure And Vibrational Frequencies Of Water And Methanol Complexes, John Michael Craig

Theses and Dissertations

Water and methanol are common solvents used in liquid chromatographic (LC) separations. It is highly desirable to model .the interactions of these solvents in order to better understand the nature of analyte solvation and its effect on retention. Therefore, structure and frequencies of complexes of these solvent molecules have been studied from a theoretical perspective as a first step in this direction. Specifically, cluster structures have been optimized at the RHF and MP2 levels in various flexible basis sets and with the counterpoise correction for basis set superposition error, and trends in the structure and binding energies of several clusters …

Hydration Studies Of Electrospray Ions From Amino Acids And Small Peptides, Chuong Quoc Nguyen

Theses and Dissertations

This project was undertaken to gain a better understanding of the hydration behaviors of gas phase ions from solutions containing amino acids and peptides. In order to characterize their hydration behavior, the molecules of interest in solutions were first converted into gas phase ions by electrospray ionization (ESI). The completely desolvated ions were then deliberately dispersed into an inert bath gas, usually nitrogen, containing accurately known concentrations of solvent vapor. The resulting mixtures of ions and bath gas were subsequently passed into a vacuum chamber by way of an adiabatic supersonic free jet expansion. The cooling during that expansion caused …

Study Of Covalent And Non-Covalent Interactions In Ternary Systems Involving: Metal/Dna-Rna/Protein, Where Metal = Platinum(Ii), Palladium(Ii), Anzellotti I. Atilio

Theses and Dissertations

Ternary systems comprising DNA/RNA, proteins and one (or more) metal ion are generating increased interest due to its biological relevance. The knowledge gained from the study of these systems could provide important clues regarding the precise mechanism for transcription factors, repair proteins and metal complexes with anti-tumoral/anti-viral activities.The interactions occurring among the components of these ternary systems can be broadly grouped into covalent and non-covalent. The first kind of interactions can lead to the irreversible transformation of the components in the system, while the second is thought to be reversible leading to transient states and fluxionality. Both kinds of interaction …

Mechanisms Of Accumulation And Biological Consequences Of Polynuclear Platinum Compounds, Peyman Kabolizadeh

Theses and Dissertations

The novel trinuclear complex, BBR3464 has undergone Phase II clinical trials and been shown to have greater cytotoxicity and cellular uptake than clinical anticancer platinum drugs such as cisplatin, oxaliplatin and carboplatin. The clinical efficacy of cisplatin, oxaliplatin and carboplatin is limited due to acquired resistance and dose limiting side effects. The three major pharmacological factors contributing to the intrinsic cytotoxicity of, and cellular resistance to, platinum drugs are (i) cellular uptake and efflux of platinum; (ii) the frequency and nature of Pt-DNA adducts; and (iii) deactivating metabolic reactions with sulfur-containing nucleophiles. Since decreased cellular uptake of platinum drugs is …

Antibacterial Fluoromicas: A Novel Delivery Medium, Bekir Dizman, Jonathan C. Badger, Mohamed O. Elasri, Lon J. Mathias

Faculty Publications

Antibacterial fluoromicas were prepared by ion-exchanging fluoromicas with different antibacterial agents including various quaternary ammonium compounds, AgNO₃, and norfloxacin. Antibacterial activities of the ion-exchanged fluoromicas were determined against Staphylococcus aureus and Escherichia coli. Minimum inhibitory concentration (MIC) and zone of inhibition (ZOI) tests were performed to determine both antibacterial effectiveness and mode of action associated with the fluoromicas. All treated fluoromicas showed excellent antibacterial activities against both types of bacteria. The antibacterial activities of treated fluoromicas were found to be either better than or the same as those of neat antibacterial agents. The repeated antibacterial activity tests demonstrated …